AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0324630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0324630 MtrunA17_Chr2g0302021 98.102 527 10 0 1 527 1 527 0.0 1084
Msa0324630 MtrunA17_Chr4g0069841 70.021 477 139 3 51 527 46 518 0.0 715
Msa0324630 MtrunA17_Chr4g0069861 62.971 478 173 2 51 527 45 519 0.0 651
Msa0324630 MtrunA17_Chr7g0272141 48.117 478 220 9 61 525 80 542 3.30e-158 461
Msa0324630 MtrunA17_Chr7g0233771 52.703 444 190 9 92 525 121 554 3.44e-156 456
Msa0324630 MtrunA17_Chr1g0147051 48.723 470 210 10 85 525 140 607 1.61e-154 454
Msa0324630 MtrunA17_Chr7g0269541 48.643 442 213 5 92 521 113 552 7.03e-151 443
Msa0324630 MtrunA17_Chr3g0126771 45.473 486 239 6 61 525 117 597 8.90e-151 444
Msa0324630 MtrunA17_Chr7g0233831 51.577 444 195 9 92 525 122 555 6.57e-150 441
Msa0324630 MtrunA17_Chr4g0011771 51.230 447 198 6 81 525 85 513 1.48e-149 438
Msa0324630 MtrunA17_Chr7g0233801 50.787 445 204 9 88 525 117 553 3.20e-149 439
Msa0324630 MtrunA17_Chr8g0345281 48.802 459 205 6 92 525 136 589 6.72e-142 421
Msa0324630 MtrunA17_Chr1g0192331 44.382 534 259 12 19 525 6 528 2.83e-140 415
Msa0324630 MtrunA17_Chr4g0011791 44.297 526 253 10 17 525 7 509 3.71e-140 414
Msa0324630 MtrunA17_Chr8g0391291 46.250 480 216 8 71 525 77 539 2.47e-139 413
Msa0324630 MtrunA17_Chr8g0391311 46.042 480 217 8 71 525 79 541 3.74e-138 410
Msa0324630 MtrunA17_Chr8g0354901 45.455 451 225 6 86 525 141 581 2.42e-137 409
Msa0324630 MtrunA17_Chr4g0069881 44.743 447 218 9 92 525 105 535 3.17e-133 397
Msa0324630 MtrunA17_Chr8g0354911 45.208 480 211 11 92 527 143 614 1.67e-132 398
Msa0324630 MtrunA17_Chr3g0080381 58.917 314 125 2 215 525 316 628 2.15e-132 398
Msa0324630 MtrunA17_Chr3g0079351 48.786 412 204 6 118 525 119 527 3.85e-132 394
Msa0324630 MtrunA17_Chr3g0079341 49.275 414 199 7 118 525 119 527 4.99e-132 394
Msa0324630 MtrunA17_Chr1g0175661 46.089 473 206 8 92 525 96 558 1.69e-131 394
Msa0324630 MtrunA17_Chr1g0195301 45.267 486 216 10 80 525 80 555 1.55e-130 391
Msa0324630 MtrunA17_Chr1g0195321 45.267 486 216 10 80 525 80 555 1.55e-130 391
Msa0324630 MtrunA17_Chr1g0195331 45.473 486 215 10 80 525 80 555 1.69e-130 391
Msa0324630 MtrunA17_Chr3g0079361 48.792 414 201 7 118 525 119 527 5.45e-130 389
Msa0324630 MtrunA17_Chr4g0011751 46.173 405 200 4 130 525 94 489 6.33e-129 384
Msa0324630 MtrunA17_Chr3g0080391 42.889 450 238 6 86 525 134 574 1.64e-128 386
Msa0324630 MtrunA17_Chr7g0269511 45.842 469 214 10 92 525 101 564 8.43e-128 384
Msa0324630 MtrunA17_Chr3g0090091 48.426 413 206 6 118 525 118 528 1.01e-127 383
Msa0324630 MtrunA17_Chr7g0269531 41.556 527 263 11 34 525 49 565 1.44e-127 384
Msa0324630 MtrunA17_Chr1g0195351 44.856 486 216 11 80 525 80 553 1.27e-125 378
Msa0324630 MtrunA17_Chr1g0194091 42.827 467 229 9 92 525 108 569 1.74e-124 376
Msa0324630 MtrunA17_Chr7g0269521 45.495 444 199 8 122 525 122 562 6.80e-123 372
Msa0324630 MtrunA17_Chr4g0018371 47.277 404 204 7 130 525 137 539 1.33e-122 370
Msa0324630 MtrunA17_Chr1g0194081 42.232 457 236 9 92 525 112 563 2.09e-120 365
Msa0324630 MtrunA17_Chr1g0192321 40.084 474 244 8 86 524 114 582 1.23e-118 362
Msa0324630 MtrunA17_Chr4g0069891 40.404 495 263 9 49 525 113 593 1.36e-115 354
Msa0324630 MtrunA17_Chr8g0345211 43.267 453 232 8 86 521 134 578 9.03e-115 351
Msa0324630 MtrunA17_Chr7g0272151 39.915 471 246 7 86 524 117 582 7.04e-114 349
Msa0324630 MtrunA17_Chr1g0195311 57.401 277 113 3 252 525 40 314 1.16e-113 339
Msa0324630 MtrunA17_Chr7g0270691 35.756 509 298 9 36 525 51 549 1.25e-112 345
Msa0324630 MtrunA17_Chr1g0192311 39.474 456 249 9 86 521 118 566 1.58e-109 338
Msa0324630 MtrunA17_Chr1g0192281 39.474 456 249 9 86 521 118 566 1.58e-109 338
Msa0324630 MtrunA17_Chr4g0000121 38.546 454 256 7 86 521 105 553 1.59e-108 335
Msa0324630 MtrunA17_Chr1g0192301 38.326 454 257 7 86 521 123 571 4.64e-107 332
Msa0324630 MtrunA17_Chr7g0270661 39.958 473 235 11 92 527 108 568 6.19e-107 331
Msa0324630 MtrunA17_Chr7g0270671 39.958 473 235 11 92 527 108 568 6.19e-107 331
Msa0324630 MtrunA17_Chr2g0295531 35.556 495 297 8 38 522 61 543 1.32e-104 326
Msa0324630 MtrunA17_Chr7g0270651 39.241 474 237 11 92 527 108 568 3.29e-104 324
Msa0324630 MtrunA17_Chr2g0302001 51.866 268 125 2 258 525 174 437 9.65e-101 310
Msa0324630 MtrunA17_Chr2g0301931 53.169 284 128 4 242 525 14 292 1.55e-98 300
Msa0324630 MtrunA17_Chr7g0270631 39.462 446 230 8 92 503 96 535 2.44e-96 316
Msa0324630 MtrunA17_Chr7g0270631 36.402 478 257 11 92 527 644 1116 2.58e-86 288
Msa0324630 MtrunA17_Chr4g0067601 37.410 417 237 6 130 524 157 571 1.78e-95 301
Msa0324630 MtrunA17_Chr4g0067611 36.706 425 245 6 122 524 149 571 1.89e-95 301
Msa0324630 MtrunA17_Chr8g0384121 38.085 470 228 14 92 524 120 563 1.58e-94 298
Msa0324630 MtrunA17_Chr2g0295551 35.332 467 259 7 86 524 112 563 5.97e-94 297
Msa0324630 MtrunA17_Chr8g0380581 43.620 337 178 6 192 522 43 373 3.98e-91 283
Msa0324630 MtrunA17_Chr7g0234711 58.009 231 96 1 296 525 39 269 3.93e-90 277
Msa0324630 MtrunA17_Chr3g0129921 38.372 430 219 11 130 524 145 563 1.66e-87 280
Msa0324630 MtrunA17_Chr2g0295541 32.024 509 281 7 80 524 87 594 1.62e-84 273
Msa0324630 MtrunA17_Chr5g0437831 39.669 363 208 7 171 525 24 383 3.76e-84 266
Msa0324630 MtrunA17_Chr2g0299431 54.918 244 104 4 182 423 22 261 6.42e-77 244
Msa0324630 MtrunA17_Chr2g0334111 34.985 323 195 5 204 525 15 323 7.07e-69 224
Msa0324630 MtrunA17_Chr7g0268241 37.821 312 182 4 215 525 50 350 5.55e-68 223
Msa0324630 MtrunA17_Chr7g0271381 34.590 451 256 12 95 525 125 556 9.57e-68 228
Msa0324630 MtrunA17_Chr7g0258341 38.141 312 171 5 215 516 90 389 4.20e-60 203
Msa0324630 MtrunA17_Chr6g0453551 33.115 305 180 5 215 509 6 296 1.05e-51 179
Msa0324630 MtrunA17_Chr1g0194311 34.056 323 188 7 202 514 61 368 1.77e-51 179
Msa0324630 MtrunA17_Chr6g0466951 34.416 308 175 6 185 487 43 328 2.38e-50 176
Msa0324630 MtrunA17_Chr6g0487101 33.237 346 187 9 193 514 55 380 8.53e-50 175
Msa0324630 MtrunA17_Chr8g0389771 32.479 351 195 9 188 514 45 377 1.49e-49 175
Msa0324630 MtrunA17_Chr6g0466961 35.252 278 157 4 215 487 40 299 1.68e-49 173
Msa0324630 MtrunA17_Chr7g0265201 33.746 323 186 7 199 514 84 385 1.67e-47 169
Msa0324630 MtrunA17_Chr5g0446301 35.294 306 171 6 221 514 67 357 1.90e-46 166
Msa0324630 MtrunA17_Chr8g0391261 51.079 139 68 0 387 525 28 166 2.28e-46 159
Msa0324630 MtrunA17_Chr7g0217941 31.683 303 183 4 217 509 8 296 7.45e-46 163
Msa0324630 MtrunA17_Chr2g0294321 32.399 321 196 6 201 515 42 347 7.40e-45 161
Msa0324630 MtrunA17_Chr1g0161731 33.456 272 161 4 223 487 57 315 5.83e-44 159
Msa0324630 MtrunA17_Chr8g0351871 33.123 317 177 8 215 517 33 328 1.63e-42 154
Msa0324630 MtrunA17_Chr4g0070051 32.399 321 184 11 206 514 44 343 2.72e-39 146
Msa0324630 MtrunA17_Chr5g0399221 29.874 318 196 6 212 517 60 362 3.46e-39 146
Msa0324630 MtrunA17_Chr5g0440871 32.258 310 184 7 208 514 32 318 7.75e-36 136
Msa0324630 MtrunA17_Chr2g0295851 30.435 322 192 9 201 515 41 337 9.13e-36 136
Msa0324630 MtrunA17_Chr4g0037751 28.367 349 218 9 183 514 28 361 3.99e-34 132
Msa0324630 MtrunA17_Chr5g0420831 28.086 324 204 7 170 476 15 326 3.03e-31 124
Msa0324630 MtrunA17_Chr7g0234731 37.778 180 106 5 118 294 138 314 5.06e-30 119
Msa0324630 MtrunA17_Chr5g0440901 38.562 153 84 3 307 459 1 143 1.01e-28 111
Msa0324630 MtrunA17_Chr6g0459781 34.973 183 107 3 204 376 2 182 1.01e-27 110
Msa0324630 MtrunA17_Chr8g0391281 33.865 251 124 8 71 296 77 310 1.40e-27 112
Msa0324630 MtrunA17_Chr5g0437821 38.519 135 82 1 328 461 4 138 1.32e-26 105
Msa0324630 MtrunA17_Chr4g0025841 29.762 252 160 4 208 459 30 264 4.56e-26 107
Msa0324630 MtrunA17_Chr2g0314691 33.166 199 114 5 319 514 19 201 1.55e-24 101
Msa0324630 MtrunA17_Chr7g0265161 33.333 174 83 4 289 457 14 159 1.99e-21 93.6
Msa0324630 MtrunA17_Chr6g0460141 37.143 140 80 4 243 374 5 144 4.71e-19 84.3
Msa0324630 MtrunA17_Chr5g0440891 31.214 173 112 2 208 380 41 206 1.18e-17 81.6
Msa0324630 MtrunA17_Chr4g0073911 27.322 183 121 4 229 403 22 200 1.03e-15 77.0
Msa0324630 MtrunA17_Chr6g0459791 35.385 130 61 5 391 514 4 116 2.75e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0324630 AT4G33220.1 63.931 524 159 5 25 525 7 523 0.0 711
Msa0324630 AT3G43270.1 62.791 516 175 4 26 525 11 525 0.0 682
Msa0324630 AT4G33220.2 66.915 402 111 1 146 525 1 402 0.0 587
Msa0324630 AT5G53370.1 49.890 455 206 8 88 525 136 585 5.00e-153 450
Msa0324630 AT5G53370.2 49.890 455 206 8 88 525 172 621 1.67e-152 450
Msa0324630 AT3G05620.1 48.352 455 209 6 87 526 99 542 1.06e-149 440
Msa0324630 AT3G49220.1 42.328 567 274 11 5 527 41 598 6.17e-144 427
Msa0324630 AT3G49220.3 42.226 566 276 10 5 527 86 643 1.98e-143 427
Msa0324630 AT1G11580.1 50.342 439 198 6 94 521 124 553 2.66e-143 424
Msa0324630 AT1G11580.2 50.342 439 198 6 94 521 145 574 6.30e-143 424
Msa0324630 AT1G53830.1 47.527 465 215 6 88 525 125 587 3.07e-139 415
Msa0324630 AT3G14310.1 46.610 472 217 6 88 525 122 592 5.88e-137 409
Msa0324630 AT2G45220.1 45.618 502 240 14 35 525 32 511 1.22e-136 405
Msa0324630 AT4G02320.1 44.956 456 215 7 92 525 77 518 3.78e-134 399
Msa0324630 AT2G26440.1 42.471 518 268 10 32 525 36 547 1.02e-133 399
Msa0324630 AT1G23200.1 43.478 506 223 8 59 525 73 554 3.70e-132 395
Msa0324630 AT4G02330.1 44.561 478 219 10 92 525 96 571 1.03e-131 395
Msa0324630 AT4G02300.1 43.237 451 228 6 92 525 93 532 3.15e-130 390
Msa0324630 AT3G05610.1 41.498 494 259 8 48 525 86 565 1.86e-128 390
Msa0324630 AT1G02810.1 40.278 576 276 14 16 525 4 577 8.53e-128 385
Msa0324630 AT2G26450.1 46.875 416 203 6 122 525 202 611 1.33e-127 386
Msa0324630 AT3G10720.2 44.186 473 219 10 92 525 149 615 1.71e-127 385
Msa0324630 AT5G51490.1 45.175 456 231 7 81 525 89 536 1.92e-127 383
Msa0324630 AT5G27870.1 40.447 492 265 8 48 525 85 562 3.37e-126 386
Msa0324630 AT5G04970.1 40.721 555 270 16 10 525 86 620 3.58e-126 382
Msa0324630 AT3G60730.1 44.366 426 204 4 130 525 97 519 5.27e-126 379
Msa0324630 AT5G51500.1 45.312 448 232 7 86 525 98 540 1.01e-123 373
Msa0324630 AT2G43050.1 43.919 444 217 7 91 525 96 516 1.39e-123 372
Msa0324630 AT3G59010.1 45.475 453 205 8 91 525 100 528 2.42e-123 372
Msa0324630 AT5G49180.1 46.247 413 200 7 129 521 156 566 4.44e-122 370
Msa0324630 AT1G53840.1 40.830 458 239 6 86 519 132 581 2.31e-121 369
Msa0324630 AT3G10710.1 41.542 467 248 9 69 525 110 561 7.52e-121 367
Msa0324630 AT2G47550.1 44.325 467 220 8 92 525 99 558 2.93e-120 365
Msa0324630 AT3G47400.1 40.275 509 282 8 37 525 88 594 5.74e-120 365
Msa0324630 AT5G04960.1 39.458 517 269 10 31 523 66 562 2.67e-119 363
Msa0324630 AT4G33230.1 40.779 488 259 10 56 525 131 606 5.59e-118 361
Msa0324630 AT3G14300.1 42.857 448 231 8 86 515 519 959 3.52e-114 361
Msa0324630 AT4G00190.1 42.661 436 223 7 92 525 64 474 1.23e-112 343
Msa0324630 AT3G10720.1 58.462 260 107 1 266 525 1 259 1.46e-112 335
Msa0324630 AT4G03930.1 43.921 403 214 5 130 525 127 524 3.49e-109 335
Msa0324630 AT3G06830.1 41.805 421 213 8 130 523 151 566 2.62e-108 335
Msa0324630 AT3G27980.1 44.332 397 211 4 133 525 107 497 5.95e-108 331
Msa0324630 AT1G11590.1 44.665 403 211 5 130 525 127 524 7.30e-108 332
Msa0324630 AT5G20860.2 42.152 446 236 10 90 525 105 538 1.05e-107 332
Msa0324630 AT4G15980.1 45.531 358 185 5 175 523 344 700 3.64e-104 328
Msa0324630 AT4G15980.2 45.531 358 185 5 175 523 354 710 1.06e-103 327
Msa0324630 AT5G09760.1 44.375 320 153 7 210 513 236 546 1.01e-87 281
Msa0324630 AT5G09760.2 44.237 321 154 7 209 513 261 572 1.70e-87 281
Msa0324630 AT1G11370.1 51.406 249 121 0 207 455 38 286 3.17e-87 271
Msa0324630 AT5G64640.1 35.135 481 234 14 85 518 153 602 8.06e-85 275
Msa0324630 AT5G20860.1 38.283 431 216 9 90 510 105 495 2.28e-84 271
Msa0324630 AT2G47030.1 41.210 347 187 4 194 525 244 588 5.47e-81 264
Msa0324630 AT2G47040.1 42.151 344 185 4 194 525 254 595 2.62e-80 262
Msa0324630 AT3G62170.1 39.155 355 191 4 194 525 236 588 1.36e-76 253
Msa0324630 AT1G05310.1 36.129 310 176 5 215 514 91 388 2.79e-56 193
Msa0324630 AT2G36710.1 34.936 312 184 5 215 519 91 390 8.09e-54 187
Msa0324630 AT5G19730.1 34.653 303 172 7 223 514 94 381 2.08e-50 177
Msa0324630 AT3G29090.1 33.115 305 180 5 215 509 7 297 4.93e-49 172
Msa0324630 AT2G36700.1 33.837 331 199 6 189 514 18 333 6.39e-49 172
Msa0324630 AT3G17060.1 31.402 328 196 7 199 516 30 338 1.29e-47 169
Msa0324630 AT1G44980.1 45.078 193 102 1 195 383 54 246 2.75e-46 162
Msa0324630 AT2G21610.1 33.775 302 178 7 215 514 51 332 3.96e-46 165
Msa0324630 AT2G21610.2 33.775 302 178 7 215 514 56 337 5.15e-46 165
Msa0324630 AT3G24130.1 34.859 284 161 5 215 487 34 304 1.18e-44 160
Msa0324630 AT5G18990.1 34.386 285 163 5 214 487 28 299 8.85e-43 155
Msa0324630 AT5G07430.1 30.245 367 219 10 168 514 6 355 1.17e-41 153
Msa0324630 AT5G55590.1 32.653 343 200 7 184 514 55 378 1.32e-41 154
Msa0324630 AT5G55590.2 35.192 287 158 8 184 458 55 325 5.40e-41 150
Msa0324630 AT5G47500.1 30.247 324 198 7 203 514 50 357 4.05e-40 149
Msa0324630 AT5G61680.1 30.226 354 204 11 183 514 26 358 9.11e-39 145
Msa0324630 AT5G26810.1 30.341 323 193 7 208 514 27 333 3.30e-38 143
Msa0324630 AT1G69940.1 27.419 372 231 9 162 514 4 355 1.20e-37 142
Msa0324630 AT5G07420.1 29.032 341 208 8 191 514 32 355 1.55e-37 142
Msa0324630 AT2G19150.1 31.962 316 189 7 215 521 41 339 5.33e-37 140
Msa0324630 AT5G07410.1 27.419 372 231 9 162 514 4 355 5.67e-37 140
Msa0324630 AT2G47280.1 31.132 318 190 8 208 514 28 327 1.40e-35 136
Msa0324630 AT2G19150.2 33.202 253 146 6 215 458 41 279 6.58e-32 124
Msa0324630 AT3G49220.2 29.641 334 184 11 5 295 86 411 7.32e-31 124

Find 130 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTCCATTCTTTCTCAATT+TGG 0.219429 2_4:-30475111 Msa0324630:CDS
TATGCTGAGTACATGAATTA+TGG 0.225681 2_4:-30469874 Msa0324630:CDS
TGTGTGAAGCTATCTAAATT+AGG 0.227617 2_4:+30473363 None:intergenic
CAATTTGGTGGTGCTGGATT+TGG 0.235870 2_4:-30475096 Msa0324630:CDS
CGGCGGTAATGTTGCAGAAT+TGG 0.286235 2_4:+30470058 None:intergenic
CTTTCTCAATTTGGTGGTGC+TGG 0.290029 2_4:-30475102 Msa0324630:CDS
GATTAAATAAACGAGTTAAA+TGG 0.296810 2_4:-30469840 Msa0324630:CDS
CTGCGAGCATTGACATCATT+TGG 0.297738 2_4:+30473406 None:intergenic
GTGTGAAGCTATCTAAATTA+GGG 0.319897 2_4:+30473364 None:intergenic
AATTTATTGAGGGGAATCTA+TGG 0.320153 2_4:-30469762 Msa0324630:CDS
GAACAAGAACATGCAAGATT+TGG 0.327961 2_4:+30469687 None:intergenic
GGATCAGCGGCGACCCAAAT+AGG 0.347578 2_4:+30469432 None:intergenic
GATCCACCAAAAGGCCCTTT+TGG 0.358030 2_4:-30469414 Msa0324630:three_prime_UTR
AATTCCACTTATACATATCT+TGG 0.358083 2_4:-30470012 Msa0324630:CDS
TTCTAGTTGGTTGGTGGGAG+AGG 0.359448 2_4:-30469657 Msa0324630:three_prime_UTR
TTGAGATCAAGAAGAAGAAA+TGG 0.373063 2_4:-30473134 Msa0324630:CDS
AAAAGGTCAATTTCCATCTT+GGG 0.373548 2_4:-30473331 Msa0324630:CDS
TTCCACTCTAGCCACCCTTC+TGG 0.377303 2_4:+30469925 None:intergenic
AGCTGAATTTGAGTTTCTTA+AGG 0.380750 2_4:-30475193 Msa0324630:CDS
TCGATGGTTGGACCACGTTC+AGG 0.380961 2_4:-30473050 Msa0324630:CDS
GTAGCATTCACTGCTGGATT+AGG 0.383549 2_4:-30469724 Msa0324630:CDS
TTGTTCTTGATTGTTCTAGT+TGG 0.384166 2_4:-30469670 Msa0324630:three_prime_UTR
ATGCTGAGTACATGAATTAT+GGG 0.385657 2_4:-30469873 Msa0324630:CDS
TTTCCTCTGATGCACTTACT+TGG 0.385665 2_4:-30475023 Msa0324630:CDS
GCCACTGCTTGGTGCTTCTC+AGG 0.385686 2_4:+30470336 None:intergenic
AGAAAACTCTTGCAAGCAAA+TGG 0.389703 2_4:-30473294 Msa0324630:CDS
TTTGAGCCAAAAGGGCCTTT+TGG 0.392012 2_4:+30469408 None:intergenic
AATTCAGCTGCTGCTTTAGT+GGG 0.393705 2_4:+30475207 None:intergenic
GAGAAACCAGTTGGTTCGTT+AGG 0.397963 2_4:+30470084 None:intergenic
TCCATTCTTTCTCAATTTGG+TGG 0.412634 2_4:-30475108 Msa0324630:CDS
AAATTCAGCTGCTGCTTTAG+TGG 0.418460 2_4:+30475206 None:intergenic
AATCCATCCATGCATGTCTC+TGG 0.419659 2_4:+30473477 None:intergenic
TGTCTGTGTGCAGCTGTTAG+TGG 0.422350 2_4:-30470405 Msa0324630:intron
TTGCTCCATCTGAATTTGTT+GGG 0.422448 2_4:-30475170 Msa0324630:CDS
AATCTATGGTTGCCCACAAC+AGG 0.423059 2_4:-30469748 Msa0324630:CDS
CGATTCAGACCTTCTTCCTT+CGG 0.425070 2_4:-30470037 Msa0324630:CDS
GTTCTTGAATATTGCTTCCA+TGG 0.429955 2_4:+30469985 None:intergenic
ATGAATTATGGGTCTGGAGC+TGG 0.430214 2_4:-30469862 Msa0324630:CDS
AATAAAGGCTTTGAGCCAAA+AGG 0.432990 2_4:+30469399 None:intergenic
CATGTTATGAGAGTGGGTAT+TGG 0.447234 2_4:+30475282 None:intergenic
TACAGTGACACAATTTATTG+AGG 0.451745 2_4:-30469773 Msa0324630:CDS
GTTGCTCCATCTGAATTTGT+TGG 0.452464 2_4:-30475171 Msa0324630:CDS
GGGGCACTGGCACATAGTGC+TGG 0.455691 2_4:+30475228 None:intergenic
GAAAACTCTTGCAAGCAAAT+GGG 0.459250 2_4:-30473293 Msa0324630:CDS
ACGTTCAGGTCAGCAACATT+TGG 0.463397 2_4:-30473036 Msa0324630:intron
GGATGCGGTGCATGCAGCTC+CGG 0.471442 2_4:-30473214 Msa0324630:CDS
GTAGGTAAGCATAATAGTAC+TGG 0.474157 2_4:-30473549 Msa0324630:intron
AGAAACCAGTTGGTTCGTTA+GGG 0.476702 2_4:+30470085 None:intergenic
TCTTGATTGTTCTAGTTGGT+TGG 0.477318 2_4:-30469666 Msa0324630:three_prime_UTR
AATAAACGAGTTAAATGGCC+AGG 0.477703 2_4:-30469835 Msa0324630:CDS
AGAAAAGAAAGAGAGTTAGT+AGG 0.479692 2_4:+30475364 None:intergenic
TGGGAGAGGTAAATTAATGA+TGG 0.482835 2_4:-30469643 Msa0324630:three_prime_UTR
GAGAGTCAATTAGTGTCTAC+TGG 0.485673 2_4:-30473435 Msa0324630:CDS
TTAGTAGGTTCCACTACGTT+GGG 0.486048 2_4:+30475379 None:intergenic
TGTGCAGCTGTTAGTGGTAG+AGG 0.487060 2_4:-30470399 Msa0324630:intron
TTCAGAGAATGCAAAATAAG+TGG 0.490025 2_4:-30470222 Msa0324630:CDS
CCACAATTATCACTGGTAAA+CGG 0.494621 2_4:-30473080 Msa0324630:CDS
TTTGTTGAAGAAAGAGCCAT+TGG 0.496653 2_4:+30475330 None:intergenic
GACGTTGTCGTTGCTACCGA+TGG 0.497231 2_4:-30473261 Msa0324630:CDS
GATTGTTCTAGTTGGTTGGT+GGG 0.499410 2_4:-30469662 Msa0324630:three_prime_UTR
TGGTACAACAAGCTTGAAGT+AGG 0.507673 2_4:-30469516 Msa0324630:three_prime_UTR
GTCGTTGCTACCGATGGGAG+CGG 0.509738 2_4:-30473255 Msa0324630:CDS
TGGAATTAACCGAAGGAAGA+AGG 0.514420 2_4:+30470028 None:intergenic
TATCGTTTCATGCTATAATC+CGG 0.515367 2_4:+30473195 None:intergenic
ACATGCATGGATGGATTTGA+AGG 0.518569 2_4:-30473471 Msa0324630:CDS
ACCACCAAATTGAGAAAGAA+TGG 0.519567 2_4:+30475107 None:intergenic
ATAAAGGCTTTGAGCCAAAA+GGG 0.520456 2_4:+30469400 None:intergenic
TGATTGTTCTAGTTGGTTGG+TGG 0.527692 2_4:-30469663 Msa0324630:three_prime_UTR
AAAGACCCTAACGAACCAAC+TGG 0.528989 2_4:-30470090 Msa0324630:CDS
GGCCAGAAGGGTGGCTAGAG+TGG 0.530386 2_4:-30469927 Msa0324630:CDS
ACAGTGACACAATTTATTGA+GGG 0.533042 2_4:-30469772 Msa0324630:CDS
GAGTACATGAATTATGGGTC+TGG 0.534865 2_4:-30469868 Msa0324630:CDS
CGGATCGTAGTGCCACTGCT+TGG 0.544626 2_4:+30470325 None:intergenic
GCATTGACATCATTTGGCTT+AGG 0.545040 2_4:+30473412 None:intergenic
GTCGCCGCTGATCCACCAAA+AGG 0.547760 2_4:-30469423 Msa0324630:three_prime_UTR
AATCCAGAGACATGCATGGA+TGG 0.553107 2_4:-30473480 Msa0324630:CDS
AATTGGATTGAGAAACCAGT+TGG 0.558646 2_4:+30470075 None:intergenic
AGACCAAGTAAGTGCATCAG+AGG 0.559656 2_4:+30475020 None:intergenic
ACAGGTGTAGCATTCACTGC+TGG 0.562002 2_4:-30469730 Msa0324630:CDS
CGAAGGAAGAAGGTCTGAAT+CGG 0.563251 2_4:+30470038 None:intergenic
GGTAAAATTCCCGCTCCCAT+CGG 0.563517 2_4:+30473245 None:intergenic
ATGAATGCCACAATTATCAC+TGG 0.566719 2_4:-30473087 Msa0324630:CDS
CAGTGACACAATTTATTGAG+GGG 0.568743 2_4:-30469771 Msa0324630:CDS
TATGAGTGTAGAGGCTGTCT+TGG 0.571960 2_4:+30470259 None:intergenic
AACGGAGCTTCATCGATGGT+TGG 0.575436 2_4:-30473062 Msa0324630:CDS
TCGTTGCTACCGATGGGAGC+GGG 0.578585 2_4:-30473254 Msa0324630:CDS
ACGTTGTCGTTGCTACCGAT+GGG 0.578930 2_4:-30473260 Msa0324630:CDS
TCTTCCAAGATATGTATAAG+TGG 0.580708 2_4:+30470008 None:intergenic
GTTAGTAGGTTCCACTACGT+TGG 0.580924 2_4:+30475378 None:intergenic
AAATGGAATCTCATGATGGT+CGG 0.582827 2_4:-30473117 Msa0324630:CDS
ATTCAGCTGCTGCTTTAGTG+GGG 0.589133 2_4:+30475208 None:intergenic
CTCATATAAGTGATGTGTTG+AGG 0.589730 2_4:-30469948 Msa0324630:CDS
AAAACTCTTGCAAGCAAATG+GGG 0.592783 2_4:-30473292 Msa0324630:CDS
AATCTCATGATGGTCGGAGA+TGG 0.595084 2_4:-30473111 Msa0324630:CDS
GAAGGGTGGCTAGAGTGGAA+TGG 0.595880 2_4:-30469922 Msa0324630:CDS
CTCTCTGTATTCTATCGATG+TGG 0.596835 2_4:-30470294 Msa0324630:CDS
AGTGAATGCTACACCTGTTG+TGG 0.597942 2_4:+30469735 None:intergenic
TTCAGCTGCTGCTTTAGTGG+GGG 0.598589 2_4:+30475209 None:intergenic
GAATACAGAGAGGTCAGAGT+CGG 0.599050 2_4:+30470305 None:intergenic
CCGTTTACCAGTGATAATTG+TGG 0.600164 2_4:+30473080 None:intergenic
GAAGAAATGGAATCTCATGA+TGG 0.602603 2_4:-30473121 Msa0324630:CDS
GGGACAGTGCAAGATGTAGT+TGG 0.605878 2_4:-30475150 Msa0324630:CDS
GAATGTGCATGTTATGAGAG+TGG 0.607767 2_4:+30475275 None:intergenic
AAGAACACTATCACAGCTCA+CGG 0.608273 2_4:-30470117 Msa0324630:CDS
TCATTCATTATGTGATACCC+TGG 0.610003 2_4:+30469817 None:intergenic
AGTGATGTGTTGAGGCCAGA+AGG 0.614258 2_4:-30469940 Msa0324630:CDS
AATGTGCATGTTATGAGAGT+GGG 0.614889 2_4:+30475276 None:intergenic
ATAAACGAGTTAAATGGCCA+GGG 0.624075 2_4:-30469834 Msa0324630:CDS
GTGAATGCTACACCTGTTGT+GGG 0.624429 2_4:+30469736 None:intergenic
ATATTCAAAGCCCAACGTAG+TGG 0.631442 2_4:-30475389 None:intergenic
GGTACAACAAGCTTGAAGTA+GGG 0.632385 2_4:-30469515 Msa0324630:three_prime_UTR
TTTGGGATTCTGAGCAGCAG+AGG 0.637374 2_4:+30474996 None:intergenic
TGCAAATCCAGAGACATGCA+TGG 0.637742 2_4:-30473484 Msa0324630:CDS
GATGGATTTGAAGGTACTAG+TGG 0.639191 2_4:-30473462 Msa0324630:CDS
TCCTGAGAAGCACCAAGCAG+TGG 0.644414 2_4:-30470337 Msa0324630:CDS
GGTAAACGGAGCTTCATCGA+TGG 0.650360 2_4:-30473066 Msa0324630:CDS
GGGAGAGGTAAATTAATGAT+GGG 0.652801 2_4:-30469642 Msa0324630:three_prime_UTR
GTGATGTGTTGAGGCCAGAA+GGG 0.653931 2_4:-30469939 Msa0324630:CDS
ATGCACCGCATCCATCACCT+TGG 0.654708 2_4:+30473224 None:intergenic
ATACATATCTTGGAAGACCA+TGG 0.655553 2_4:-30470002 Msa0324630:CDS
ACTGTCCCAACAAATTCAGA+TGG 0.656011 2_4:+30475165 None:intergenic
GTATAAGTGGAATTAACCGA+AGG 0.660435 2_4:+30470021 None:intergenic
TCTGCTGCTCAGAATCCCAA+AGG 0.671590 2_4:-30474994 Msa0324630:intron
TATGTGATATACGTAAAGAG+AGG 0.672031 2_4:-30473174 Msa0324630:CDS
AGGAAGAAGGTCTGAATCGG+CGG 0.672730 2_4:+30470041 None:intergenic
TGAACTCTGATGTGAGAACA+TGG 0.674307 2_4:-30473521 Msa0324630:CDS
GGCGCATTGTATGAGTGTAG+AGG 0.711444 2_4:+30470250 None:intergenic
ATGTGTTGAGGCCAGAAGGG+TGG 0.717629 2_4:-30469936 Msa0324630:CDS
AAATGTTGCTGACCTGAACG+TGG 0.734033 2_4:+30473038 None:intergenic
CACATCGATAGAATACAGAG+AGG 0.764745 2_4:+30470295 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTTTTTTTTTTAA+GGG - chr2_4:30473265-30473284 Msa0324630:CDS 0.0%
!!! ACACTAATTTTTTATTTTTT+TGG - chr2_4:30470678-30470697 Msa0324630:intron 10.0%
!! AATAAAAATATAAATACTAG+AGG - chr2_4:30470931-30470950 Msa0324630:intron 10.0%
!!! TGGTAATAATATTTTTTTTA+GGG + chr2_4:30472319-30472338 None:intergenic 10.0%
!!! TCTTTTATATAAAAAATTTG+GGG - chr2_4:30472957-30472976 Msa0324630:intron 10.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2_4:30470493-30470512 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2_4:30470492-30470511 Msa0324630:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2_4:30470516-30470535 Msa0324630:intron 15.0%
!! CTAAAATAATGACAATTAAA+GGG + chr2_4:30470785-30470804 None:intergenic 15.0%
!!! TCTAAAATAATGACAATTAA+AGG + chr2_4:30470786-30470805 None:intergenic 15.0%
!!! TTGTAAACGAAATAATTTTA+TGG - chr2_4:30470957-30470976 Msa0324630:intron 15.0%
!!! ACTTTTTTAGCATAATTTAT+AGG - chr2_4:30471991-30472010 Msa0324630:intron 15.0%
!!! CTTTTTTAGCATAATTTATA+GGG - chr2_4:30471992-30472011 Msa0324630:intron 15.0%
!!! GGTAATAATATTTTTTTTAG+GGG + chr2_4:30472318-30472337 None:intergenic 15.0%
!!! GTGGTAATAATATTTTTTTT+AGG + chr2_4:30472320-30472339 None:intergenic 15.0%
!! ATAACGTAGTATATTATTAA+AGG - chr2_4:30473442-30473461 Msa0324630:CDS 15.0%
!!! TTTTATTCACTTTTCTTTTT+TGG - chr2_4:30473729-30473748 Msa0324630:intron 15.0%
!!! TTTATTCACTTTTCTTTTTT+GGG - chr2_4:30473730-30473749 Msa0324630:intron 15.0%
!! AGTTAAAATTCTTATATTTG+TGG + chr2_4:30473770-30473789 None:intergenic 15.0%
!!! TTCTTTTTATTAGTTTTGAT+AGG - chr2_4:30473812-30473831 Msa0324630:intron 15.0%
!! TATAGAAAAAAGATACATAT+TGG - chr2_4:30473911-30473930 Msa0324630:intron 15.0%
!!! AAATTTTGATTATTGTAATG+TGG - chr2_4:30475231-30475250 Msa0324630:CDS 15.0%
!!! TAATTAATTTGTTACCACTT+TGG - chr2_4:30469890-30469909 Msa0324630:CDS 20.0%
!!! AAAAGTTTATATCTTTTCCA+GGG - chr2_4:30469961-30469980 Msa0324630:CDS 20.0%
!!! AGTGATAACTATTTTTTCAT+GGG + chr2_4:30470105-30470124 None:intergenic 20.0%
!!! AAGTGATAACTATTTTTTCA+TGG + chr2_4:30470106-30470125 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2_4:30470502-30470521 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr2_4:30470579-30470598 Msa0324630:intron 20.0%
!!! CATTTTGAAACAAATGTTTT+TGG - chr2_4:30470619-30470638 Msa0324630:intron 20.0%
!! AAAAAGAGAAACAAAAAGTT+AGG - chr2_4:30471044-30471063 Msa0324630:intron 20.0%
!! AAAAGAGAAACAAAAAGTTA+GGG - chr2_4:30471045-30471064 Msa0324630:intron 20.0%
!! AACTGTTATACTATAGTTAT+TGG + chr2_4:30471090-30471109 None:intergenic 20.0%
!!! TTTTGGTCATTTTTAAAGAA+TGG - chr2_4:30471153-30471172 Msa0324630:intron 20.0%
!!! CTAAAAAAGTTTAACTTATG+GGG + chr2_4:30471981-30472000 None:intergenic 20.0%
!!! GCTAAAAAAGTTTAACTTAT+GGG + chr2_4:30471982-30472001 None:intergenic 20.0%
!!! TGCTAAAAAAGTTTAACTTA+TGG + chr2_4:30471983-30472002 None:intergenic 20.0%
!!! AACATACTATAATTTTATGC+AGG - chr2_4:30472124-30472143 Msa0324630:intron 20.0%
!!! ACATACTATAATTTTATGCA+GGG - chr2_4:30472125-30472144 Msa0324630:intron 20.0%
!! AAACCATTAAATACATCTAA+TGG - chr2_4:30472154-30472173 Msa0324630:intron 20.0%
!! AAACCATTAGATGTATTTAA+TGG + chr2_4:30472160-30472179 None:intergenic 20.0%
!!! TTAAATACATCTAATGGTTT+TGG - chr2_4:30472160-30472179 Msa0324630:intron 20.0%
!!! TTGTTTCTCTATATATAATG+CGG + chr2_4:30472254-30472273 None:intergenic 20.0%
!!! AATAATATTTTTTTTAGGGG+TGG + chr2_4:30472315-30472334 None:intergenic 20.0%
!! ACAATGCATTATTATATGTA+GGG + chr2_4:30472569-30472588 None:intergenic 20.0%
!! AACAATGCATTATTATATGT+AGG + chr2_4:30472570-30472589 None:intergenic 20.0%
!!! TATAGTACGAACAATAATTT+TGG - chr2_4:30472802-30472821 Msa0324630:intron 20.0%
!! TTTATATAAAAAATTTGGGG+TGG - chr2_4:30472960-30472979 Msa0324630:intron 20.0%
!! GTATGTGAATACATTTATAA+AGG + chr2_4:30473125-30473144 None:intergenic 20.0%
!!! TATTAGTTTTGATAGGTTTA+TGG - chr2_4:30473819-30473838 Msa0324630:intron 20.0%
!!! ATTAGTTTTGATAGGTTTAT+GGG - chr2_4:30473820-30473839 Msa0324630:intron 20.0%
!!! CTAATATGGACTTTAAAAAA+TGG - chr2_4:30473849-30473868 Msa0324630:intron 20.0%
!! TAGTTAAAACTGAATTGTTA+AGG + chr2_4:30474190-30474209 None:intergenic 20.0%
!! TGTCAAATACTAGTAAAAAA+AGG - chr2_4:30474614-30474633 Msa0324630:intron 20.0%
!! GTCAAATACTAGTAAAAAAA+GGG - chr2_4:30474615-30474634 Msa0324630:intron 20.0%
!! GATTAAATAAACGAGTTAAA+TGG - chr2_4:30474927-30474946 Msa0324630:intron 20.0%
!!! ATTCATTATTTTCTCCTATT+TGG - chr2_4:30475321-30475340 Msa0324630:CDS 20.0%
!!! TTCATTATTTTCTCCTATTT+GGG - chr2_4:30475322-30475341 Msa0324630:CDS 20.0%
!! TATAAACTTTTGCATGATGT+AGG + chr2_4:30469952-30469971 None:intergenic 25.0%
!! CAAAAGTTTATATCTTTTCC+AGG - chr2_4:30469960-30469979 Msa0324630:CDS 25.0%
! ATAGTTATTATGCTTGAGAT+TGG + chr2_4:30470160-30470179 None:intergenic 25.0%
!!! TTTTTTTTGGCTCTAATTGT+AGG - chr2_4:30471200-30471219 Msa0324630:intron 25.0%
! TTCACACAAAAAGAACAAAA+AGG - chr2_4:30471419-30471438 Msa0324630:intron 25.0%
!!! AGTGCAGATTCTTTTTTTTT+TGG - chr2_4:30472472-30472491 Msa0324630:intron 25.0%
!!! AGATTCTTTTTTTTTTGGTC+AGG - chr2_4:30472477-30472496 Msa0324630:intron 25.0%
! CAATGCATTATTATATGTAG+GGG + chr2_4:30472568-30472587 None:intergenic 25.0%
! AAAAAAAGAGAGATGAGAAT+GGG + chr2_4:30472753-30472772 None:intergenic 25.0%
! AAAAAAAAGAGAGATGAGAA+TGG + chr2_4:30472754-30472773 None:intergenic 25.0%
!! TAATTACGGAGTAATTTTTC+TGG + chr2_4:30472936-30472955 None:intergenic 25.0%
! ATAGAAACGTTGCATATTTA+TGG - chr2_4:30473041-30473060 Msa0324630:CDS 25.0%
! AATGTTAAAACCGAAAATCT+TGG + chr2_4:30473201-30473220 None:intergenic 25.0%
!!! AGATTTTCGGTTTTAACATT+AGG - chr2_4:30473201-30473220 Msa0324630:CDS 25.0%
!! TACTACGTTATGTTATGTTT+TGG + chr2_4:30473433-30473452 None:intergenic 25.0%
!! CAATGTAAACATGAGAATTT+TGG + chr2_4:30473597-30473616 None:intergenic 25.0%
! TCATGTTTACATTGTTTATC+TGG - chr2_4:30473603-30473622 Msa0324630:intron 25.0%
! TTTATGGGATCTATCTAATA+TGG - chr2_4:30473835-30473854 Msa0324630:intron 25.0%
!! ACATAGCTTGTATGTAAATA+TGG + chr2_4:30474108-30474127 None:intergenic 25.0%
!! GACATTTTACACATATATGT+TGG + chr2_4:30474263-30474282 None:intergenic 25.0%
!! TCGATTTTACACATATATGT+TGG + chr2_4:30474318-30474337 None:intergenic 25.0%
! AACACACATAAAGATTAGTA+AGG + chr2_4:30474342-30474361 None:intergenic 25.0%
! AATTCCACTTATACATATCT+TGG - chr2_4:30474755-30474774 Msa0324630:intron 25.0%
AGAAAAGAAAGAGAGTTAGT+AGG + chr2_4:30469406-30469425 None:intergenic 30.0%
!! TTTCTCTACTTTTCTTCCAA+TGG - chr2_4:30469421-30469440 Msa0324630:three_prime_UTR 30.0%
! AGCTGAATTTGAGTTTCTTA+AGG - chr2_4:30469574-30469593 Msa0324630:three_prime_UTR 30.0%
ATGTCCATTCTTTCTCAATT+TGG - chr2_4:30469656-30469675 Msa0324630:three_prime_UTR 30.0%
ACGTATGAATAGAAAGTAAG+CGG + chr2_4:30469827-30469846 None:intergenic 30.0%
CTCAAGCATAATAACTATGT+TGG - chr2_4:30470162-30470181 Msa0324630:CDS 30.0%
!! TTACCCATTTTTATTACGAC+CGG - chr2_4:30470319-30470338 Msa0324630:CDS 30.0%
!! CTTTTCTTTTTTCGCTAAGT+TGG - chr2_4:30470363-30470382 Msa0324630:CDS 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr2_4:30470410-30470429 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr2_4:30470411-30470430 Msa0324630:intron 30.0%
AATTAAAGGGAATCAAGAGT+AGG + chr2_4:30470772-30470791 None:intergenic 30.0%
! TGAAGTTTCAATTCGACTTT+TGG - chr2_4:30471136-30471155 Msa0324630:intron 30.0%
GTGTGAAGCTATCTAAATTA+GGG + chr2_4:30471406-30471425 None:intergenic 30.0%
TGTGTGAAGCTATCTAAATT+AGG + chr2_4:30471407-30471426 None:intergenic 30.0%
AAAAAGGTCAATTTCCATCT+TGG - chr2_4:30471435-30471454 Msa0324630:intron 30.0%
AAAAGGTCAATTTCCATCTT+GGG - chr2_4:30471436-30471455 Msa0324630:intron 30.0%
TATCGTTTCATGCTATAATC+CGG + chr2_4:30471575-30471594 None:intergenic 30.0%
TATGTGATATACGTAAAGAG+AGG - chr2_4:30471593-30471612 Msa0324630:intron 30.0%
TTGAGATCAAGAAGAAGAAA+TGG - chr2_4:30471633-30471652 Msa0324630:intron 30.0%
! TGAAGAAAAAGAAAAGTGCA+TGG + chr2_4:30471774-30471793 None:intergenic 30.0%
! TTTTTGTGTGTGTTTCACAT+AGG + chr2_4:30471832-30471851 None:intergenic 30.0%
TTAGCATAATTTATAGGGTG+CGG - chr2_4:30471997-30472016 Msa0324630:intron 30.0%
! CATAAATCCAGAAATGGTTT+TGG - chr2_4:30472053-30472072 Msa0324630:intron 30.0%
AAACCATTTCCACAGTAAAA+TGG - chr2_4:30472090-30472109 Msa0324630:intron 30.0%
! AAACCATTTTACTGTGGAAA+TGG + chr2_4:30472096-30472115 None:intergenic 30.0%
! TTTCCACAGTAAAATGGTTT+TGG - chr2_4:30472096-30472115 Msa0324630:intron 30.0%
CAACTCACAAAAACTATTTC+TGG - chr2_4:30472187-30472206 Msa0324630:intron 30.0%
!! AACTATTTCTGGATTTATGC+AGG - chr2_4:30472198-30472217 Msa0324630:intron 30.0%
!! ACTATTTCTGGATTTATGCA+GGG - chr2_4:30472199-30472218 Msa0324630:intron 30.0%
CTCTATATATAATGCGGTTA+TGG + chr2_4:30472248-30472267 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr2_4:30472520-30472539 Msa0324630:intron 30.0%
TTGATGAGCCAGATAATATT+AGG - chr2_4:30472651-30472670 Msa0324630:intron 30.0%
AGATAATATTAGGTGGGTAT+GGG - chr2_4:30472661-30472680 Msa0324630:intron 30.0%
!!! CGAACAATAATTTTGGTGTT+TGG - chr2_4:30472809-30472828 Msa0324630:intron 30.0%
! TATCGATTGATGTAAGTTCA+CGG + chr2_4:30473024-30473043 None:intergenic 30.0%
!! GTGAGTTCATATTTTAAACG+TGG + chr2_4:30473099-30473118 None:intergenic 30.0%
TCGTTAATCTTTAGCATGTT+TGG + chr2_4:30473154-30473173 None:intergenic 30.0%
ATCAAATGCTATAGAACCTT+CGG - chr2_4:30473339-30473358 Msa0324630:CDS 30.0%
! ACTTTAAAAAATGGCTCGAA+AGG - chr2_4:30473858-30473877 Msa0324630:intron 30.0%
CTCATTAGCTATATGTAACT+TGG - chr2_4:30474076-30474095 Msa0324630:intron 30.0%
! GTTGGTTTATAATTCAAGCT+AGG + chr2_4:30474300-30474319 None:intergenic 30.0%
! TTCTATCGATGTGGAATTTT+TGG - chr2_4:30474482-30474501 Msa0324630:intron 30.0%
!! TTTTGCATTCTCTGAAGAAT+TGG + chr2_4:30474541-30474560 None:intergenic 30.0%
TTCAGAGAATGCAAAATAAG+TGG - chr2_4:30474545-30474564 Msa0324630:intron 30.0%
!! GTGATAGTGTTCTTTTGATT+TGG + chr2_4:30474644-30474663 None:intergenic 30.0%
TCTTCCAAGATATGTATAAG+TGG + chr2_4:30474762-30474781 None:intergenic 30.0%
TATGCTGAGTACATGAATTA+TGG - chr2_4:30474893-30474912 Msa0324630:intron 30.0%
ATGCTGAGTACATGAATTAT+GGG - chr2_4:30474894-30474913 Msa0324630:intron 30.0%
TACAGTGACACAATTTATTG+AGG - chr2_4:30474994-30475013 Msa0324630:intron 30.0%
ACAGTGACACAATTTATTGA+GGG - chr2_4:30474995-30475014 Msa0324630:CDS 30.0%
AATTTATTGAGGGGAATCTA+TGG - chr2_4:30475005-30475024 Msa0324630:CDS 30.0%
TTGTTCTTGATTGTTCTAGT+TGG - chr2_4:30475097-30475116 Msa0324630:CDS 30.0%
TTTGTTGAAGAAAGAGCCAT+TGG + chr2_4:30469440-30469459 None:intergenic 35.0%
AATGTGCATGTTATGAGAGT+GGG + chr2_4:30469494-30469513 None:intergenic 35.0%
! TTGCTCCATCTGAATTTGTT+GGG - chr2_4:30469597-30469616 Msa0324630:three_prime_UTR 35.0%
TCCATTCTTTCTCAATTTGG+TGG - chr2_4:30469659-30469678 Msa0324630:three_prime_UTR 35.0%
ACCACCAAATTGAGAAAGAA+TGG + chr2_4:30469663-30469682 None:intergenic 35.0%
AACTTGAGTATAAGCCAAAG+TGG + chr2_4:30469907-30469926 None:intergenic 35.0%
! GTTTATATCTTTTCCAGGGT+TGG - chr2_4:30469965-30469984 Msa0324630:CDS 35.0%
ATGACTTATTTATCCAACCC+TGG + chr2_4:30469981-30470000 None:intergenic 35.0%
TTACATTTACCGAAGTGATG+TGG - chr2_4:30470197-30470216 Msa0324630:CDS 35.0%
TAATACTTCTGTCCCTATCA+TGG + chr2_4:30470247-30470266 None:intergenic 35.0%
!! TACCCATTTTTATTACGACC+GGG - chr2_4:30470320-30470339 Msa0324630:CDS 35.0%
AAAAGCAGAGTTCTATGTAG+CGG + chr2_4:30470348-30470367 None:intergenic 35.0%
! ACGGAGGGAGTATAAAAAAT+TGG + chr2_4:30470391-30470410 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr2_4:30470541-30470560 Msa0324630:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2_4:30470545-30470564 Msa0324630:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2_4:30470645-30470664 Msa0324630:intron 35.0%
GTAGGTAAGCATAATAGTAC+TGG - chr2_4:30471218-30471237 Msa0324630:intron 35.0%
! TCATCTCTTTTAACCCAAGA+TGG + chr2_4:30471452-30471471 None:intergenic 35.0%
AGAAAACTCTTGCAAGCAAA+TGG - chr2_4:30471473-30471492 Msa0324630:intron 35.0%
GAAAACTCTTGCAAGCAAAT+GGG - chr2_4:30471474-30471493 Msa0324630:intron 35.0%
AAAACTCTTGCAAGCAAATG+GGG - chr2_4:30471475-30471494 Msa0324630:intron 35.0%
GAAGAAATGGAATCTCATGA+TGG - chr2_4:30471646-30471665 Msa0324630:intron 35.0%
AAATGGAATCTCATGATGGT+CGG - chr2_4:30471650-30471669 Msa0324630:intron 35.0%
ATGAATGCCACAATTATCAC+TGG - chr2_4:30471680-30471699 Msa0324630:intron 35.0%
CCACAATTATCACTGGTAAA+CGG - chr2_4:30471687-30471706 Msa0324630:intron 35.0%
AAACACACACAAAAACCTTG+TGG - chr2_4:30471837-30471856 Msa0324630:intron 35.0%
TCACAAAAATGTGTTCCACA+AGG + chr2_4:30471855-30471874 None:intergenic 35.0%
! TTGTGGAACACATTTTTGTG+AGG - chr2_4:30471854-30471873 Msa0324630:intron 35.0%
! TGTGGAACACATTTTTGTGA+GGG - chr2_4:30471855-30471874 Msa0324630:intron 35.0%
AGTAAAATGGCACGCAAAAA+CGG - chr2_4:30471889-30471908 Msa0324630:intron 35.0%
CCCTCGCAAATAATTTATGA+CGG + chr2_4:30471915-30471934 None:intergenic 35.0%
CCGTCATAAATTATTTGCGA+GGG - chr2_4:30471912-30471931 Msa0324630:intron 35.0%
CGTCATAAATTATTTGCGAG+GGG - chr2_4:30471913-30471932 Msa0324630:intron 35.0%
! ACCATTTCTGGATTTATGCA+GGG + chr2_4:30472051-30472070 None:intergenic 35.0%
! AACCATTTCTGGATTTATGC+AGG + chr2_4:30472052-30472071 None:intergenic 35.0%
TTGTACTCCAAAACCATTTC+TGG + chr2_4:30472063-30472082 None:intergenic 35.0%
! ACTCCAAAACCATTTTACTG+TGG + chr2_4:30472102-30472121 None:intergenic 35.0%
! TATAATTTTATGCAGGGTGC+TGG - chr2_4:30472131-30472150 Msa0324630:intron 35.0%
!! AATGAGAATGCGTCATTTTG+TGG + chr2_4:30472339-30472358 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG - chr2_4:30472508-30472527 Msa0324630:intron 35.0%
CACCTTATAAGGTGAATAAG+TGG - chr2_4:30472519-30472538 Msa0324630:intron 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr2_4:30472521-30472540 Msa0324630:intron 35.0%
! AATAGAGAGCATAGCTCATT+TGG + chr2_4:30472596-30472615 None:intergenic 35.0%
ATGAGCCAGATAATATTAGG+TGG - chr2_4:30472654-30472673 Msa0324630:intron 35.0%
TGAGCCAGATAATATTAGGT+GGG - chr2_4:30472655-30472674 Msa0324630:intron 35.0%
CATACCCACCTAATATTATC+TGG + chr2_4:30472662-30472681 None:intergenic 35.0%
CAGATAATATTAGGTGGGTA+TGG - chr2_4:30472660-30472679 Msa0324630:intron 35.0%
AACAAATATTCGTGTTCGAC+TGG - chr2_4:30472712-30472731 Msa0324630:intron 35.0%
ACAAATATTCGTGTTCGACT+GGG - chr2_4:30472713-30472732 Msa0324630:intron 35.0%
GTGGAGAAGTAGACATTTAA+AGG + chr2_4:30473080-30473099 None:intergenic 35.0%
GATTAACGAGACTCGAAATT+AGG - chr2_4:30473165-30473184 Msa0324630:CDS 35.0%
CTCTAACTTATCCCATAGAA+AGG - chr2_4:30473303-30473322 Msa0324630:CDS 35.0%
TGAAAAGCGATCCTTTCTAT+GGG + chr2_4:30473317-30473336 None:intergenic 35.0%
CTATAGAACCTTCGGTAATA+CGG - chr2_4:30473347-30473366 Msa0324630:CDS 35.0%
TAATGCTAACCAGTGCTTTA+GGG - chr2_4:30473370-30473389 Msa0324630:CDS 35.0%
TTAACATTACCCTAAAGCAC+TGG + chr2_4:30473382-30473401 None:intergenic 35.0%
!! TGCTTTAGGGTAATGTTAAC+CGG - chr2_4:30473383-30473402 Msa0324630:CDS 35.0%
AGGGAAGGATAATGTTATGT+TGG + chr2_4:30473474-30473493 None:intergenic 35.0%
ATATATTTCAGCTGCTGAAG+AGG + chr2_4:30473572-30473591 None:intergenic 35.0%
! GTCTTTGTATTGATAGCACA+AGG - chr2_4:30473961-30473980 Msa0324630:intron 35.0%
! TTGTGCAAGTTCGTTAGTTT+GGG + chr2_4:30474154-30474173 None:intergenic 35.0%
ATTGTGCAAGTTCGTTAGTT+TGG + chr2_4:30474155-30474174 None:intergenic 35.0%
!!! GGCACTGTCGATTTTATTTT+TGG - chr2_4:30474566-30474585 Msa0324630:intron 35.0%
!!! ACAGTTTTGAAAAAGAGTCG+TGG + chr2_4:30474597-30474616 None:intergenic 35.0%
AATTGGATTGAGAAACCAGT+TGG + chr2_4:30474695-30474714 None:intergenic 35.0%
GTATAAGTGGAATTAACCGA+AGG + chr2_4:30474749-30474768 None:intergenic 35.0%
ATACATATCTTGGAAGACCA+TGG - chr2_4:30474765-30474784 Msa0324630:intron 35.0%
GTTCTTGAATATTGCTTCCA+TGG + chr2_4:30474785-30474804 None:intergenic 35.0%
CTCATATAAGTGATGTGTTG+AGG - chr2_4:30474819-30474838 Msa0324630:intron 35.0%
AATAAACGAGTTAAATGGCC+AGG - chr2_4:30474932-30474951 Msa0324630:intron 35.0%
ATAAACGAGTTAAATGGCCA+GGG - chr2_4:30474933-30474952 Msa0324630:intron 35.0%
TCATTCATTATGTGATACCC+TGG + chr2_4:30474953-30474972 None:intergenic 35.0%
CAGTGACACAATTTATTGAG+GGG - chr2_4:30474996-30475015 Msa0324630:CDS 35.0%
GAACAAGAACATGCAAGATT+TGG + chr2_4:30475083-30475102 None:intergenic 35.0%
! TCTTGATTGTTCTAGTTGGT+TGG - chr2_4:30475101-30475120 Msa0324630:CDS 35.0%
TGGGAGAGGTAAATTAATGA+TGG - chr2_4:30475124-30475143 Msa0324630:CDS 35.0%
GGGAGAGGTAAATTAATGAT+GGG - chr2_4:30475125-30475144 Msa0324630:CDS 35.0%
!! ATAAAGGCTTTGAGCCAAAA+GGG + chr2_4:30475370-30475389 None:intergenic 35.0%
!! AATAAAGGCTTTGAGCCAAA+AGG + chr2_4:30475371-30475390 None:intergenic 35.0%
TTAGTAGGTTCCACTACGTT+GGG + chr2_4:30469391-30469410 None:intergenic 40.0%
CATGTTATGAGAGTGGGTAT+TGG + chr2_4:30469488-30469507 None:intergenic 40.0%
GAATGTGCATGTTATGAGAG+TGG + chr2_4:30469495-30469514 None:intergenic 40.0%
!! AATTCAGCTGCTGCTTTAGT+GGG + chr2_4:30469563-30469582 None:intergenic 40.0%
!! AAATTCAGCTGCTGCTTTAG+TGG + chr2_4:30469564-30469583 None:intergenic 40.0%
GTTGCTCCATCTGAATTTGT+TGG - chr2_4:30469596-30469615 Msa0324630:three_prime_UTR 40.0%
ACTGTCCCAACAAATTCAGA+TGG + chr2_4:30469605-30469624 None:intergenic 40.0%
TTTCCTCTGATGCACTTACT+TGG - chr2_4:30469744-30469763 Msa0324630:CDS 40.0%
! CCTCTAGTGCTATTACCTTT+GGG + chr2_4:30469791-30469810 None:intergenic 40.0%
!! ACCCATTTTTATTACGACCG+GGG - chr2_4:30470321-30470340 Msa0324630:CDS 40.0%
TCCCCGGTCGTAATAAAAAT+GGG + chr2_4:30470325-30470344 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_4:30470649-30470668 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr2_4:30470544-30470563 Msa0324630:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_4:30470649-30470668 Msa0324630:intron 40.0%
TGAACTCTGATGTGAGAACA+TGG - chr2_4:30471246-30471265 Msa0324630:intron 40.0%
! ACATGCATGGATGGATTTGA+AGG - chr2_4:30471296-30471315 Msa0324630:intron 40.0%
!! GATGGATTTGAAGGTACTAG+TGG - chr2_4:30471305-30471324 Msa0324630:intron 40.0%
GAGAGTCAATTAGTGTCTAC+TGG - chr2_4:30471332-30471351 Msa0324630:intron 40.0%
! GCATTGACATCATTTGGCTT+AGG + chr2_4:30471358-30471377 None:intergenic 40.0%
!!! TTTTACCAAGGTGATGGATG+CGG - chr2_4:30471538-30471557 Msa0324630:intron 40.0%
CCGTTTACCAGTGATAATTG+TGG + chr2_4:30471690-30471709 None:intergenic 40.0%
GGACATTGCGAAGAGTAAAA+TGG - chr2_4:30471876-30471895 Msa0324630:intron 40.0%
GCCGTCATAAATTATTTGCG+AGG - chr2_4:30471911-30471930 Msa0324630:intron 40.0%
TAACCCTTGCGAAATTTGCA+AGG - chr2_4:30471937-30471956 Msa0324630:intron 40.0%
AACCCTTGCGAAATTTGCAA+GGG - chr2_4:30471938-30471957 Msa0324630:intron 40.0%
ACCCTGCATAAATCCAGAAA+TGG - chr2_4:30472047-30472066 Msa0324630:intron 40.0%
TAATGCGGTTATGGTGCATA+AGG + chr2_4:30472239-30472258 None:intergenic 40.0%
!! TTTTTGGTCAGGTAGTCTAG+TGG - chr2_4:30472488-30472507 Msa0324630:intron 40.0%
CCCCACTTATTCACCTTATA+AGG + chr2_4:30472524-30472543 None:intergenic 40.0%
TTGTTCCCTACTAGCTAGTT+GGG + chr2_4:30472697-30472716 None:intergenic 40.0%
TTTGTTCCCTACTAGCTAGT+TGG + chr2_4:30472698-30472717 None:intergenic 40.0%
CAAATATTCGTGTTCGACTG+GGG - chr2_4:30472714-30472733 Msa0324630:intron 40.0%
AAGAGAGATGAGAATGGGTA+GGG + chr2_4:30472748-30472767 None:intergenic 40.0%
AAAGAGAGATGAGAATGGGT+AGG + chr2_4:30472749-30472768 None:intergenic 40.0%
! TTCCCTAGGACCAAGATTTT+CGG - chr2_4:30473188-30473207 Msa0324630:CDS 40.0%
AACCGAAAATCTTGGTCCTA+GGG + chr2_4:30473193-30473212 None:intergenic 40.0%
AAACCGAAAATCTTGGTCCT+AGG + chr2_4:30473194-30473213 None:intergenic 40.0%
CTGAAAAGCGATCCTTTCTA+TGG + chr2_4:30473318-30473337 None:intergenic 40.0%
TAGCATTACCGTATTACCGA+AGG + chr2_4:30473358-30473377 None:intergenic 40.0%
GTAATGCTAACCAGTGCTTT+AGG - chr2_4:30473369-30473388 Msa0324630:CDS 40.0%
TAATGTTAACCGGTGCTTCA+GGG - chr2_4:30473393-30473412 Msa0324630:CDS 40.0%
TTCGCATTCTGTAAGTTGCA+GGG + chr2_4:30473493-30473512 None:intergenic 40.0%
TTTCGCATTCTGTAAGTTGC+AGG + chr2_4:30473494-30473513 None:intergenic 40.0%
!! ATCACTTTTCAGAACACTGC+TGG - chr2_4:30474407-30474426 Msa0324630:intron 40.0%
CACATCGATAGAATACAGAG+AGG + chr2_4:30474475-30474494 None:intergenic 40.0%
CTCTCTGTATTCTATCGATG+TGG - chr2_4:30474473-30474492 Msa0324630:intron 40.0%
AAGAACACTATCACAGCTCA+CGG - chr2_4:30474650-30474669 Msa0324630:intron 40.0%
!! AGAAACCAGTTGGTTCGTTA+GGG + chr2_4:30474685-30474704 None:intergenic 40.0%
TGGAATTAACCGAAGGAAGA+AGG + chr2_4:30474742-30474761 None:intergenic 40.0%
GAGTACATGAATTATGGGTC+TGG - chr2_4:30474899-30474918 Msa0324630:intron 40.0%
! TGATTGTTCTAGTTGGTTGG+TGG - chr2_4:30475104-30475123 Msa0324630:CDS 40.0%
! GATTGTTCTAGTTGGTTGGT+GGG - chr2_4:30475105-30475124 Msa0324630:CDS 40.0%
TGGTACAACAAGCTTGAAGT+AGG - chr2_4:30475251-30475270 Msa0324630:CDS 40.0%
GGTACAACAAGCTTGAAGTA+GGG - chr2_4:30475252-30475271 Msa0324630:CDS 40.0%
GTTAGTAGGTTCCACTACGT+TGG + chr2_4:30469392-30469411 None:intergenic 45.0%
!! ATTCAGCTGCTGCTTTAGTG+GGG + chr2_4:30469562-30469581 None:intergenic 45.0%
!! CTTTCTCAATTTGGTGGTGC+TGG - chr2_4:30469665-30469684 Msa0324630:three_prime_UTR 45.0%
!! CAATTTGGTGGTGCTGGATT+TGG - chr2_4:30469671-30469690 Msa0324630:three_prime_UTR 45.0%
AGACCAAGTAAGTGCATCAG+AGG + chr2_4:30469750-30469769 None:intergenic 45.0%
CCCAAAGGTAATAGCACTAG+AGG - chr2_4:30469788-30469807 Msa0324630:CDS 45.0%
! GCCTCTAGTGCTATTACCTT+TGG + chr2_4:30469792-30469811 None:intergenic 45.0%
ACTCACACACCACATCACTT+CGG + chr2_4:30470209-30470228 None:intergenic 45.0%
TGTGTGAGTGAAGCTACCTT+GGG - chr2_4:30470220-30470239 Msa0324630:CDS 45.0%
GTCCCCGGTCGTAATAAAAA+TGG + chr2_4:30470326-30470345 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_4:30470648-30470667 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_4:30470648-30470667 Msa0324630:intron 45.0%
TGCAAATCCAGAGACATGCA+TGG - chr2_4:30471283-30471302 Msa0324630:intron 45.0%
AATCCAGAGACATGCATGGA+TGG - chr2_4:30471287-30471306 Msa0324630:intron 45.0%
AATCCATCCATGCATGTCTC+TGG + chr2_4:30471293-30471312 None:intergenic 45.0%
!! CTGCGAGCATTGACATCATT+TGG + chr2_4:30471364-30471383 None:intergenic 45.0%
! CGGGAATTTTACCAAGGTGA+TGG - chr2_4:30471532-30471551 Msa0324630:intron 45.0%
AATCTCATGATGGTCGGAGA+TGG - chr2_4:30471656-30471675 Msa0324630:intron 45.0%
AAATGTTGCTGACCTGAACG+TGG + chr2_4:30471732-30471751 None:intergenic 45.0%
ACGTTCAGGTCAGCAACATT+TGG - chr2_4:30471731-30471750 Msa0324630:intron 45.0%
ACCCTTGCGAAATTTGCAAG+GGG - chr2_4:30471939-30471958 Msa0324630:intron 45.0%
TCCCCTTGCAAATTTCGCAA+GGG + chr2_4:30471943-30471962 None:intergenic 45.0%
TTCCCCTTGCAAATTTCGCA+AGG + chr2_4:30471944-30471963 None:intergenic 45.0%
TAACTTATGGGGTTTCCGCA+GGG + chr2_4:30471970-30471989 None:intergenic 45.0%
TTAACTTATGGGGTTTCCGC+AGG + chr2_4:30471971-30471990 None:intergenic 45.0%
GGATTTATGCAGGGTGCATA+AGG + chr2_4:30472208-30472227 None:intergenic 45.0%
GGATTTATGCAGGGTGCATA+AGG - chr2_4:30472208-30472227 Msa0324630:intron 45.0%
! AGGTGAATAAGTGGGGTGTT+CGG - chr2_4:30472528-30472547 Msa0324630:intron 45.0%
TAGACACCCAACTAGCTAGT+AGG - chr2_4:30472688-30472707 Msa0324630:intron 45.0%
AGACACCCAACTAGCTAGTA+GGG - chr2_4:30472689-30472708 Msa0324630:intron 45.0%
!! ATGCGCCATCGTTAACTTGT+TGG - chr2_4:30472885-30472904 Msa0324630:intron 45.0%
CTGAGCCAACAAGTTAACGA+TGG + chr2_4:30472893-30472912 None:intergenic 45.0%
!! CATCGTTAACTTGTTGGCTC+AGG - chr2_4:30472891-30472910 Msa0324630:intron 45.0%
GACTCGAAATTAGGTTCCCT+AGG - chr2_4:30473174-30473193 Msa0324630:CDS 45.0%
GTAATGTTAACCGGTGCTTC+AGG - chr2_4:30473392-30473411 Msa0324630:CDS 45.0%
TAACCAATACCCTGAAGCAC+CGG + chr2_4:30473405-30473424 None:intergenic 45.0%
CATTCTGTAAGTTGCAGGGA+AGG + chr2_4:30473489-30473508 None:intergenic 45.0%
GAATACAGAGAGGTCAGAGT+CGG + chr2_4:30474465-30474484 None:intergenic 45.0%
TATGAGTGTAGAGGCTGTCT+TGG + chr2_4:30474511-30474530 None:intergenic 45.0%
AAAGACCCTAACGAACCAAC+TGG - chr2_4:30474677-30474696 Msa0324630:intron 45.0%
!! GAGAAACCAGTTGGTTCGTT+AGG + chr2_4:30474686-30474705 None:intergenic 45.0%
CGAAGGAAGAAGGTCTGAAT+CGG + chr2_4:30474732-30474751 None:intergenic 45.0%
CGATTCAGACCTTCTTCCTT+CGG - chr2_4:30474730-30474749 Msa0324630:intron 45.0%
! GTGGAATGGAGATTTTGCAC+TGG - chr2_4:30474859-30474878 Msa0324630:intron 45.0%
! ATGAATTATGGGTCTGGAGC+TGG - chr2_4:30474905-30474924 Msa0324630:intron 45.0%
AATCTATGGTTGCCCACAAC+AGG - chr2_4:30475019-30475038 Msa0324630:CDS 45.0%
GTGAATGCTACACCTGTTGT+GGG + chr2_4:30475034-30475053 None:intergenic 45.0%
AGTGAATGCTACACCTGTTG+TGG + chr2_4:30475035-30475054 None:intergenic 45.0%
GTAGCATTCACTGCTGGATT+AGG - chr2_4:30475043-30475062 Msa0324630:CDS 45.0%
! TTTGAGCCAAAAGGGCCTTT+TGG + chr2_4:30475362-30475381 None:intergenic 45.0%
!! ATTATTATTATTATTATTGA+TGG - chr2_4:30470859-30470878 Msa0324630:intron 5.0%
!!! AAAATATTAATACTTTTTTT+TGG - chr2_4:30471187-30471206 Msa0324630:intron 5.0%
!!! ATATACATTATTTTTTTTAA+AGG - chr2_4:30472431-30472450 Msa0324630:intron 5.0%
!! TTTATATAAAAGAATAATTA+CGG + chr2_4:30472950-30472969 None:intergenic 5.0%
!!! ATTCTTTTATATAAAAAATT+TGG - chr2_4:30472955-30472974 Msa0324630:intron 5.0%
!!! TTCTTTTATATAAAAAATTT+GGG - chr2_4:30472956-30472975 Msa0324630:intron 5.0%
!!! GTAATTTTTTTTTTTTTTTA+AGG - chr2_4:30473264-30473283 Msa0324630:CDS 5.0%
!!! AATTTTTTTTTTTTTTTAAG+GGG - chr2_4:30473266-30473285 Msa0324630:CDS 5.0%
!! AATAAGATAATAAATAATTA+AGG - chr2_4:30473884-30473903 Msa0324630:intron 5.0%
!! ATAAGATAATAAATAATTAA+GGG - chr2_4:30473885-30473904 Msa0324630:intron 5.0%
!! TTCAGCTGCTGCTTTAGTGG+GGG + chr2_4:30469561-30469580 None:intergenic 50.0%
GGGACAGTGCAAGATGTAGT+TGG - chr2_4:30469617-30469636 Msa0324630:three_prime_UTR 50.0%
! TTTGGGATTCTGAGCAGCAG+AGG + chr2_4:30469774-30469793 None:intergenic 50.0%
TCTGCTGCTCAGAATCCCAA+AGG - chr2_4:30469773-30469792 Msa0324630:CDS 50.0%
GTGTGTGAGTGAAGCTACCT+TGG - chr2_4:30470219-30470238 Msa0324630:CDS 50.0%
AGCTACCTTGGGACCATGAT+AGG - chr2_4:30470231-30470250 Msa0324630:CDS 50.0%
GCTACCTTGGGACCATGATA+GGG - chr2_4:30470232-30470251 Msa0324630:CDS 50.0%
ACGTTGTCGTTGCTACCGAT+GGG - chr2_4:30471507-30471526 Msa0324630:intron 50.0%
GGTAAAATTCCCGCTCCCAT+CGG + chr2_4:30471525-30471544 None:intergenic 50.0%
! TGGGAGCGGGAATTTTACCA+AGG - chr2_4:30471526-30471545 Msa0324630:intron 50.0%
GGTAAACGGAGCTTCATCGA+TGG - chr2_4:30471701-30471720 Msa0324630:intron 50.0%
AACGGAGCTTCATCGATGGT+TGG - chr2_4:30471705-30471724 Msa0324630:intron 50.0%
AACTTATGGGGTTTCCGCAG+GGG + chr2_4:30471969-30471988 None:intergenic 50.0%
GGGTGCGGTTATCATGCATA+AGG - chr2_4:30472012-30472031 Msa0324630:intron 50.0%
GATGAGAATGGGTAGGGTGA+CGG + chr2_4:30472742-30472761 None:intergenic 50.0%
TAACCGGTGCTTCAGGGTAT+TGG - chr2_4:30473399-30473418 Msa0324630:CDS 50.0%
TTTCAGCTGCTGAAGAGGAC+AGG + chr2_4:30473567-30473586 None:intergenic 50.0%
TGTCTGTGTGCAGCTGTTAG+TGG - chr2_4:30474362-30474381 Msa0324630:intron 50.0%
GGCGCATTGTATGAGTGTAG+AGG + chr2_4:30474520-30474539 None:intergenic 50.0%
CGGCGGTAATGTTGCAGAAT+TGG + chr2_4:30474712-30474731 None:intergenic 50.0%
AGGAAGAAGGTCTGAATCGG+CGG + chr2_4:30474729-30474748 None:intergenic 50.0%
AGTGATGTGTTGAGGCCAGA+AGG - chr2_4:30474827-30474846 Msa0324630:intron 50.0%
GTGATGTGTTGAGGCCAGAA+GGG - chr2_4:30474828-30474847 Msa0324630:intron 50.0%
ACAGGTGTAGCATTCACTGC+TGG - chr2_4:30475037-30475056 Msa0324630:CDS 50.0%
!! TTCTAGTTGGTTGGTGGGAG+AGG - chr2_4:30475110-30475129 Msa0324630:CDS 50.0%
! GATCCACCAAAAGGCCCTTT+TGG - chr2_4:30475353-30475372 Msa0324630:five_prime_UTR 50.0%
CTGTCCCTATCATGGTCCCA+AGG + chr2_4:30470239-30470258 None:intergenic 55.0%
GAGTTCTATGTAGCGGTCCC+CGG + chr2_4:30470341-30470360 None:intergenic 55.0%
GACGTTGTCGTTGCTACCGA+TGG - chr2_4:30471506-30471525 Msa0324630:intron 55.0%
ATGCACCGCATCCATCACCT+TGG + chr2_4:30471546-30471565 None:intergenic 55.0%
TCGATGGTTGGACCACGTTC+AGG - chr2_4:30471717-30471736 Msa0324630:intron 55.0%
TTGCAAGGGGAATACCCCTG+CGG - chr2_4:30471952-30471971 Msa0324630:intron 55.0%
CTGAAGAGGACAGGAGTCGT+AGG + chr2_4:30473558-30473577 None:intergenic 55.0%
!! TCCTGAGAAGCACCAAGCAG+TGG - chr2_4:30474430-30474449 Msa0324630:intron 55.0%
ATGTGTTGAGGCCAGAAGGG+TGG - chr2_4:30474831-30474850 Msa0324630:intron 55.0%
TTCCACTCTAGCCACCCTTC+TGG + chr2_4:30474845-30474864 None:intergenic 55.0%
GAAGGGTGGCTAGAGTGGAA+TGG - chr2_4:30474845-30474864 Msa0324630:intron 55.0%
!! AGGGCCTTTTGGTGGATCAG+CGG + chr2_4:30475351-30475370 None:intergenic 55.0%
! GAGCCAAAAGGGCCTTTTGG+TGG + chr2_4:30475359-30475378 None:intergenic 55.0%
!! TGCTGCTTTAGTGGGGGCAC+TGG + chr2_4:30469555-30469574 None:intergenic 60.0%
GTCGTTGCTACCGATGGGAG+CGG - chr2_4:30471512-30471531 Msa0324630:intron 60.0%
TCGTTGCTACCGATGGGAGC+GGG - chr2_4:30471513-30471532 Msa0324630:intron 60.0%
!! GCCACTGCTTGGTGCTTCTC+AGG + chr2_4:30474434-30474453 None:intergenic 60.0%
! CGGATCGTAGTGCCACTGCT+TGG + chr2_4:30474445-30474464 None:intergenic 60.0%
GGATCAGCGGCGACCCAAAT+AGG + chr2_4:30475338-30475357 None:intergenic 60.0%
GTCGCCGCTGATCCACCAAA+AGG - chr2_4:30475344-30475363 Msa0324630:exon 60.0%
!! GGGGCACTGGCACATAGTGC+TGG + chr2_4:30469542-30469561 None:intergenic 65.0%
GGATGCGGTGCATGCAGCTC+CGG - chr2_4:30471553-30471572 Msa0324630:intron 65.0%
GGCCAGAAGGGTGGCTAGAG+TGG - chr2_4:30474840-30474859 Msa0324630:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 30469387 30475402 30469387 ID=Msa0324630;Name=Msa0324630
chr2_4 mRNA 30469387 30475402 30469387 ID=Msa0324630-mRNA-1;Parent=Msa0324630;Name=Msa0324630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=53|1|1|1|1|1|3|330|527
chr2_4 exon 30469387 30470414 30469387 ID=Msa0324630-mRNA-1:exon:10223;Parent=Msa0324630-mRNA-1
chr2_4 exon 30473037 30473567 30473037 ID=Msa0324630-mRNA-1:exon:10222;Parent=Msa0324630-mRNA-1
chr2_4 exon 30474995 30475402 30474995 ID=Msa0324630-mRNA-1:exon:10221;Parent=Msa0324630-mRNA-1
chr2_4 five_prime_UTR 30475350 30475402 30475350 ID=Msa0324630-mRNA-1:five_prime_utr;Parent=Msa0324630-mRNA-1
chr2_4 CDS 30474995 30475349 30474995 ID=Msa0324630-mRNA-1:cds;Parent=Msa0324630-mRNA-1
chr2_4 CDS 30473037 30473567 30473037 ID=Msa0324630-mRNA-1:cds;Parent=Msa0324630-mRNA-1
chr2_4 CDS 30469717 30470414 30469717 ID=Msa0324630-mRNA-1:cds;Parent=Msa0324630-mRNA-1
chr2_4 three_prime_UTR 30469387 30469716 30469387 ID=Msa0324630-mRNA-1:three_prime_utr;Parent=Msa0324630-mRNA-1
Gene Sequence

>Msa0324630

ATGGCTCTTTCTTCAACAAAAGAGTTAGTACTATCTCGAACAAAACCAATACCCACTCTCATAACATGCACATTCATTTTAACATTATTGTTGTCTAGTCCAGCACTATGTGCCAGTGCCCCCACTAAAGCAGCAGCTGAATTTGAGTTTCTTAAGGTTGCTCCATCTGAATTTGTTGGGACAGTGCAAGATGTAGTTGGCATTTTGCAAGAAGTAATGTCCATTCTTTCTCAATTTGGTGGTGCTGGATTTGGAGATTCACGTCTCTCTAATGCTGTTTCTGATTGTATTGATATGCTTGATCTTTCCTCTGATGCACTTACTTGGTCTGCCTCTGCTGCTCAGAATCCCAAAGGTAAGCATAATAGTACTGGAAATGTGAACTCTGATGTGAGAACATGGTTAAGTTCTGCACTTGCAAATCCAGAGACATGCATGGATGGATTTGAAGGTACTAGTGGCATTGAGAGTCAATTAGTGTCTACTGGCCTAAGCCAAATGATGTCAATGCTCGCAGAGCTTCTCACACAAGTAGACCCTAATTTAGATAGCTTCACACAAAAAGAACAAAAAGGTCAATTTCCATCTTGGGTTAAAAGAGATGATAGAAAACTCTTGCAAGCAAATGGGGTGAATGTCGACGTTGTCGTTGCTACCGATGGGAGCGGGAATTTTACCAAGGTGATGGATGCGGTGCATGCAGCTCCGGATTATAGCATGAAACGATATGTGATATACGTAAAGAGAGGTGTTTATGTTGAAAATGTTGAGATCAAGAAGAAGAAATGGAATCTCATGATGGTCGGAGATGGTATGAATGCCACAATTATCACTGGTAAACGGAGCTTCATCGATGGTTGGACCACGTTCAGGTCAGCAACATTTGCTGTTAGTGGTAGAGGATTCATAGCACGAGACATCACTTTTCAGAACACTGCTGGTCCTGAGAAGCACCAAGCAGTGGCACTACGATCCGACTCTGACCTCTCTGTATTCTATCGATGTGGAATTTTTGGTTACCAAGACAGCCTCTACACTCATACAATGCGCCAATTCTTCAGAGAATGCAAAATAAGTGGCACTGTCGATTTTATTTTTGGCGATGCCACGACTCTTTTTCAAAACTGTCAAATACTAGTAAAAAAAGGGTTACCAAATCAAAAGAACACTATCACAGCTCACGGACGAAAAGACCCTAACGAACCAACTGGTTTCTCAATCCAATTCTGCAACATTACCGCCGATTCAGACCTTCTTCCTTCGGTTAATTCCACTTATACATATCTTGGAAGACCATGGAAGCAATATTCAAGAACAATTTTCATGCAATCTCATATAAGTGATGTGTTGAGGCCAGAAGGGTGGCTAGAGTGGAATGGAGATTTTGCACTGGATACATTGTACTATGCTGAGTACATGAATTATGGGTCTGGAGCTGGATTAAATAAACGAGTTAAATGGCCAGGGTATCACATAATGAATGATTCTAGTCAAGCTAGTAACTTTACAGTGACACAATTTATTGAGGGGAATCTATGGTTGCCCACAACAGGTGTAGCATTCACTGCTGGATTAGGAGTTTAA
Protein sequence

>Msa0324630

MALSSTKELVLSRTKPIPTLITCTFILTLLLSSPALCASAPTKAAAEFEFLKVAPSEFVGTVQDVVGILQEVMSILSQFGGAGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQNPKGKHNSTGNVNSDVRTWLSSALANPETCMDGFEGTSGIESQLVSTGLSQMMSMLAELLTQVDPNLDSFTQKEQKGQFPSWVKRDDRKLLQANGVNVDVVVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKRGVYVENVEIKKKKWNLMMVGDGMNATIITGKRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPSVNSTYTYLGRPWKQYSRTIFMQSHISDVLRPEGWLEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLPTTGVAFTAGLGV*