Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706580 | XP_003630571.1 | 97.122 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 2.25e-91 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706580 | sp|Q9SW21|ACP4_ARATH | 56.115 | 139 | 52 | 4 | 1 | 138 | 1 | 131 | 5.49e-39 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706580 | G7LIR8 | 97.122 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 1.07e-91 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0706580 | 0.814948 | 1.188023e-51 | -8.615850e-47 |
| Msa0003470 | Msa0706580 | 0.816898 | 4.361453e-52 | -8.615850e-47 |
| Msa0006580 | Msa0706580 | 0.809779 | 1.598555e-50 | -8.615850e-47 |
| Msa0006870 | Msa0706580 | 0.830985 | 2.157568e-55 | -8.615850e-47 |
| Msa0012460 | Msa0706580 | 0.818833 | 1.594420e-52 | -8.615850e-47 |
| Msa0017120 | Msa0706580 | 0.804226 | 2.391408e-49 | -8.615850e-47 |
| Msa0017940 | Msa0706580 | 0.840953 | 6.373504e-58 | -8.615850e-47 |
| Msa0030730 | Msa0706580 | 0.804301 | 2.307359e-49 | -8.615850e-47 |
| Msa0032400 | Msa0706580 | 0.806095 | 9.715235e-50 | -8.615850e-47 |
| Msa0034320 | Msa0706580 | 0.813541 | 2.429802e-51 | -8.615850e-47 |
| Msa0043160 | Msa0706580 | 0.849049 | 4.148135e-60 | -8.615850e-47 |
| Msa0043680 | Msa0706580 | 0.857616 | 1.445949e-62 | -8.615850e-47 |
| Msa0048020 | Msa0706580 | 0.832872 | 7.375687e-56 | -8.615850e-47 |
| Msa0049990 | Msa0706580 | 0.839639 | 1.404653e-57 | -8.615850e-47 |
| Msa0050580 | Msa0706580 | 0.828456 | 8.898551e-55 | -8.615850e-47 |
| Msa0065390 | Msa0706580 | 0.817514 | 3.170027e-52 | -8.615850e-47 |
| Msa0073390 | Msa0706580 | 0.817126 | 3.876343e-52 | -8.615850e-47 |
| Msa0073820 | Msa0706580 | 0.803619 | 3.197276e-49 | -8.615850e-47 |
| Msa0077410 | Msa0706580 | 0.812767 | 3.592352e-51 | -8.615850e-47 |
| Msa0077910 | Msa0706580 | 0.864129 | 1.518466e-64 | -8.615850e-47 |
| Msa0078090 | Msa0706580 | 0.822545 | 2.236531e-53 | -8.615850e-47 |
| Msa0082820 | Msa0706580 | 0.857845 | 1.236819e-62 | -8.615850e-47 |
| Msa0089210 | Msa0706580 | 0.811147 | 8.098588e-51 | -8.615850e-47 |
| Msa0091550 | Msa0706580 | 0.826978 | 2.015747e-54 | -8.615850e-47 |
| Msa0092180 | Msa0706580 | 0.836648 | 8.273923e-57 | -8.615850e-47 |
| Msa0092660 | Msa0706580 | 0.864393 | 1.255493e-64 | -8.615850e-47 |
| Msa0092680 | Msa0706580 | 0.841532 | 4.489647e-58 | -8.615850e-47 |
| Msa0092730 | Msa0706580 | 0.862672 | 4.292960e-64 | -8.615850e-47 |
| Msa0100570 | Msa0706580 | 0.831101 | 2.020651e-55 | -8.615850e-47 |
| Msa0100860 | Msa0706580 | 0.830406 | 2.990184e-55 | -8.615850e-47 |
| Msa0101210 | Msa0706580 | 0.804175 | 2.450135e-49 | -8.615850e-47 |
| Msa0103780 | Msa0706580 | 0.803386 | 3.572857e-49 | -8.615850e-47 |
| Msa0104420 | Msa0706580 | 0.807801 | 4.232251e-50 | -8.615850e-47 |
| Msa0105210 | Msa0706580 | 0.811412 | 7.091772e-51 | -8.615850e-47 |
| Msa0110710 | Msa0706580 | 0.815012 | 1.149587e-51 | -8.615850e-47 |
| Msa0112290 | Msa0706580 | 0.853865 | 1.801439e-61 | -8.615850e-47 |
| Msa0605670 | Msa0706580 | 0.813351 | 2.674155e-51 | -8.615850e-47 |
| Msa0606140 | Msa0706580 | 0.810086 | 1.372952e-50 | -8.615850e-47 |
| Msa0607480 | Msa0706580 | 0.880655 | 4.590693e-70 | -8.615850e-47 |
| Msa0610860 | Msa0706580 | 0.812800 | 3.533591e-51 | -8.615850e-47 |
| Msa0619330 | Msa0706580 | 0.800274 | 1.556091e-48 | -8.615850e-47 |
| Msa0620130 | Msa0706580 | 0.877322 | 6.894124e-69 | -8.615850e-47 |
| Msa0623760 | Msa0706580 | 0.818155 | 2.271670e-52 | -8.615850e-47 |
| Msa0632970 | Msa0706580 | -0.804875 | 1.750754e-49 | -8.615850e-47 |
| Msa0633750 | Msa0706580 | 0.824133 | 9.521194e-54 | -8.615850e-47 |
| Msa0640880 | Msa0706580 | 0.820686 | 6.016063e-53 | -8.615850e-47 |
| Msa0642650 | Msa0706580 | 0.837650 | 4.587200e-57 | -8.615850e-47 |
| Msa0643800 | Msa0706580 | 0.817171 | 3.786811e-52 | -8.615850e-47 |
| Msa0646710 | Msa0706580 | 0.824751 | 6.811524e-54 | -8.615850e-47 |
| Msa0647750 | Msa0706580 | 0.876061 | 1.883131e-68 | -8.615850e-47 |
| Msa0659920 | Msa0706580 | 0.975078 | 2.683419e-139 | -8.615850e-47 |
| Msa0667970 | Msa0706580 | 0.817494 | 3.202754e-52 | -8.615850e-47 |
| Msa0671610 | Msa0706580 | -0.843701 | 1.191747e-58 | -8.615850e-47 |
| Msa0681890 | Msa0706580 | 0.835081 | 2.065586e-56 | -8.615850e-47 |
| Msa0682400 | Msa0706580 | 0.829537 | 4.869910e-55 | -8.615850e-47 |
| Msa0683650 | Msa0706580 | 0.836135 | 1.117458e-56 | -8.615850e-47 |
| Msa0686240 | Msa0706580 | 0.847453 | 1.145182e-59 | -8.615850e-47 |
| Msa0690500 | Msa0706580 | 0.829918 | 3.933532e-55 | -8.615850e-47 |
| Msa0703720 | Msa0706580 | 0.878968 | 1.827177e-69 | -8.615850e-47 |
| Msa0703760 | Msa0706580 | 0.886465 | 3.341657e-72 | -8.615850e-47 |
| Msa0705250 | Msa0706580 | 0.807689 | 4.471637e-50 | -8.615850e-47 |
| Msa0706580 | Msa0709480 | 0.835235 | 1.888563e-56 | -8.615850e-47 |
| Msa0706580 | Msa0717090 | 0.821137 | 4.736779e-53 | -8.615850e-47 |
| Msa0706580 | Msa0720380 | 0.828122 | 1.071590e-54 | -8.615850e-47 |
| Msa0706580 | Msa0730180 | 0.812347 | 4.437225e-51 | -8.615850e-47 |
| Msa0706580 | Msa0732100 | 0.817376 | 3.406016e-52 | -8.615850e-47 |
| Msa0706580 | Msa0748890 | 0.825664 | 4.144845e-54 | -8.615850e-47 |
| Msa0706580 | Msa0761790 | 0.840243 | 9.776879e-58 | -8.615850e-47 |
| Msa0706580 | Msa0770430 | 0.824572 | 7.507893e-54 | -8.615850e-47 |
| Msa0706580 | Msa0773080 | 0.809129 | 2.204018e-50 | -8.615850e-47 |
| Msa0706580 | Msa0787460 | 0.800185 | 1.623031e-48 | -8.615850e-47 |
| Msa0706580 | Msa0790180 | 0.861940 | 7.205046e-64 | -8.615850e-47 |
| Msa0706580 | Msa0790830 | 0.839331 | 1.689074e-57 | -8.615850e-47 |
| Msa0706580 | Msa0803130 | 0.800533 | 1.378191e-48 | -8.615850e-47 |
| Msa0706580 | Msa0804110 | 0.822498 | 2.293355e-53 | -8.615850e-47 |
| Msa0706580 | Msa0810370 | 0.839093 | 1.947556e-57 | -8.615850e-47 |
| Msa0706580 | Msa0814760 | 0.830626 | 2.641665e-55 | -8.615850e-47 |
| Msa0706580 | Msa0842220 | 0.840341 | 9.217583e-58 | -8.615850e-47 |
| Msa0706580 | Msa0863440 | 0.829797 | 4.210337e-55 | -8.615850e-47 |
| Msa0706580 | Msa0881050 | 0.801368 | 9.305142e-49 | -8.615850e-47 |
| Msa0706580 | Msa0890250 | 0.801268 | 9.754407e-49 | -8.615850e-47 |
| Msa0706580 | Msa0900320 | 0.835603 | 1.523835e-56 | -8.615850e-47 |
| Msa0706580 | Msa0901140 | 0.801528 | 8.630777e-49 | -8.615850e-47 |
| Msa0706580 | Msa0925160 | 0.832458 | 9.346458e-56 | -8.615850e-47 |
| Msa0706580 | Msa0926860 | 0.806924 | 6.493116e-50 | -8.615850e-47 |
| Msa0706580 | Msa0930330 | 0.813761 | 2.173552e-51 | -8.615850e-47 |
| Msa0706580 | Msa0931480 | 0.808190 | 3.498718e-50 | -8.615850e-47 |
| Msa0706580 | Msa0946650 | 0.812662 | 3.787285e-51 | -8.615850e-47 |
| Msa0706580 | Msa0955260 | 0.834280 | 3.284433e-56 | -8.615850e-47 |
| Msa0706580 | Msa0965960 | 0.828693 | 7.802177e-55 | -8.615850e-47 |
| Msa0706580 | Msa0972730 | 0.845175 | 4.785638e-59 | -8.615850e-47 |
| Msa0706580 | Msa0978260 | 0.816406 | 5.623169e-52 | -8.615850e-47 |
| Msa0706580 | Msa0990520 | 0.832449 | 9.392780e-56 | -8.615850e-47 |
| Msa0706580 | Msa0992570 | 0.804579 | 2.018812e-49 | -8.615850e-47 |
| Msa0706580 | Msa0992590 | 0.809975 | 1.450409e-50 | -8.615850e-47 |
| Msa0706580 | Msa1002980 | 0.811258 | 7.660793e-51 | -8.615850e-47 |
| Msa0706580 | Msa1009790 | 0.815295 | 9.948232e-52 | -8.615850e-47 |
| Msa0706580 | Msa1013510 | 0.801282 | 9.691771e-49 | -8.615850e-47 |
| Msa0706580 | Msa1021220 | 0.805436 | 1.335996e-49 | -8.615850e-47 |
| Msa0706580 | Msa1022310 | 0.851135 | 1.080947e-60 | -8.615850e-47 |
| Msa0706580 | Msa1027790 | 0.849597 | 2.919788e-60 | -8.615850e-47 |
| Msa0706580 | Msa1028460 | 0.830246 | 3.272044e-55 | -8.615850e-47 |
| Msa0706580 | Msa1032140 | 0.844878 | 5.755080e-59 | -8.615850e-47 |
| Msa0706580 | Msa1032970 | 0.826986 | 2.007082e-54 | -8.615850e-47 |
| Msa0706580 | Msa1033120 | 0.827599 | 1.431146e-54 | -8.615850e-47 |
| Msa0706580 | Msa1040010 | 0.802167 | 6.380632e-49 | -8.615850e-47 |
| Msa0706580 | Msa1040770 | 0.808751 | 2.655177e-50 | -8.615850e-47 |
| Msa0706580 | Msa1045440 | 0.877174 | 7.762124e-69 | -8.615850e-47 |
| Msa0706580 | Msa1050240 | 0.812254 | 4.649347e-51 | -8.615850e-47 |
| Msa0706580 | Msa1061180 | 0.852635 | 4.055932e-61 | -8.615850e-47 |
| Msa0706580 | Msa1067430 | 0.879716 | 9.931164e-70 | -8.615850e-47 |
| Msa0706580 | Msa1072080 | 0.877633 | 5.373065e-69 | -8.615850e-47 |
| Msa0706580 | Msa1074730 | 0.813654 | 2.294079e-51 | -8.615850e-47 |
| Msa0706580 | Msa1080620 | 0.815154 | 1.069026e-51 | -8.615850e-47 |
| Msa0706580 | Msa1080690 | 0.814017 | 1.908824e-51 | -8.615850e-47 |
| Msa0706580 | Msa1084150 | 0.854590 | 1.112146e-61 | -8.615850e-47 |
| Msa0706580 | Msa1084490 | 0.823492 | 1.345342e-53 | -8.615850e-47 |
| Msa0706580 | Msa1097850 | 0.808333 | 3.261575e-50 | -8.615850e-47 |
| Msa0706580 | Msa1103670 | 0.819902 | 9.100552e-53 | -8.615850e-47 |
| Msa0706580 | Msa1106560 | 0.831521 | 1.592103e-55 | -8.615850e-47 |
| Msa0706580 | Msa1106580 | 0.861784 | 8.041777e-64 | -8.615850e-47 |
| Msa0706580 | Msa1110350 | 0.802706 | 4.938855e-49 | -8.615850e-47 |
| Msa0706580 | Msa1112610 | 0.848490 | 5.929414e-60 | -8.615850e-47 |
| Msa0706580 | Msa1117690 | 0.823583 | 1.280971e-53 | -8.615850e-47 |
| Msa0706580 | Msa1118390 | 0.815688 | 8.134132e-52 | -8.615850e-47 |
| Msa0706580 | Msa1123630 | 0.811585 | 6.505986e-51 | -8.615850e-47 |
| Msa0706580 | Msa1125780 | 0.826871 | 2.138203e-54 | -8.615850e-47 |
| Msa0706580 | Msa1125950 | 0.830369 | 3.053436e-55 | -8.615850e-47 |
| Msa0706580 | Msa1126310 | 0.846455 | 2.148688e-59 | -8.615850e-47 |
| Msa0706580 | Msa1127510 | 0.857553 | 1.509084e-62 | -8.615850e-47 |
| Msa0706580 | Msa1128350 | 0.800734 | 1.254028e-48 | -8.615850e-47 |
| Msa0706580 | Msa1130880 | 0.819546 | 1.097367e-52 | -8.615850e-47 |
| Msa0706580 | Msa1130940 | 0.838505 | 2.762962e-57 | -8.615850e-47 |
| Msa0706580 | Msa1137610 | 0.825495 | 4.544997e-54 | -8.615850e-47 |
| Msa0706580 | Msa1138840 | 0.805026 | 1.628032e-49 | -8.615850e-47 |
| Msa0706580 | Msa1149760 | 0.816434 | 5.540259e-52 | -8.615850e-47 |
| Msa0706580 | Msa1149960 | 0.842786 | 2.089697e-58 | -8.615850e-47 |
| Msa0706580 | Msa1154020 | 0.801498 | 8.752293e-49 | -8.615850e-47 |
| Msa0706580 | Msa1154670 | 0.801137 | 1.037572e-48 | -8.615850e-47 |
| Msa0706580 | Msa1156210 | 0.813633 | 2.318457e-51 | -8.615850e-47 |
| Msa0706580 | Msa1159100 | 0.846474 | 2.123316e-59 | -8.615850e-47 |
| Msa0706580 | Msa1166180 | 0.822552 | 2.229009e-53 | -8.615850e-47 |
| Msa0706580 | Msa1166280 | 0.819971 | 8.777134e-53 | -8.615850e-47 |
| Msa0706580 | Msa1167160 | 0.837696 | 4.462787e-57 | -8.615850e-47 |
| Msa0706580 | Msa1171340 | 0.834679 | 2.607377e-56 | -8.615850e-47 |
| Msa0706580 | Msa1173020 | 0.801133 | 1.039534e-48 | -8.615850e-47 |
| Msa0706580 | Msa1175750 | 0.843846 | 1.089653e-58 | -8.615850e-47 |
| Msa0706580 | Msa1180410 | 0.809722 | 1.644392e-50 | -8.615850e-47 |
| Msa0706580 | Msa1183390 | 0.836279 | 1.027314e-56 | -8.615850e-47 |
| Msa0706580 | Msa1183610 | 0.848539 | 5.748115e-60 | -8.615850e-47 |
| Msa0706580 | Msa1183760 | 0.890357 | 1.059838e-73 | -8.615850e-47 |
| Msa0706580 | Msa1190910 | 0.817949 | 2.528826e-52 | -8.615850e-47 |
| Msa0706580 | Msa1197110 | 0.839648 | 1.397266e-57 | -8.615850e-47 |
| Msa0706580 | Msa1200920 | 0.800293 | 1.542384e-48 | -8.615850e-47 |
| Msa0706580 | Msa1207280 | 0.867148 | 1.693937e-65 | -8.615850e-47 |
| Msa0706580 | Msa1208750 | 0.824542 | 7.628453e-54 | -8.615850e-47 |
| Msa0706580 | Msa1219250 | 0.848289 | 6.737894e-60 | -8.615850e-47 |
| Msa0706580 | Msa1222390 | 0.812944 | 3.285644e-51 | -8.615850e-47 |
| Msa0706580 | Msa1228950 | 0.861747 | 8.256202e-64 | -8.615850e-47 |
| Msa0706580 | Msa1229050 | 0.826626 | 2.447024e-54 | -8.615850e-47 |
| Msa0706580 | Msa1232010 | 0.818702 | 1.707509e-52 | -8.615850e-47 |
| Msa0706580 | Msa1234960 | 0.803847 | 2.866905e-49 | -8.615850e-47 |
| Msa0706580 | Msa1235890 | 0.827439 | 1.563180e-54 | -8.615850e-47 |
| Msa0706580 | Msa1244260 | 0.834318 | 3.211932e-56 | -8.615850e-47 |
| Msa0706580 | Msa1250670 | 0.821458 | 3.994265e-53 | -8.615850e-47 |
| Msa0706580 | Msa1257520 | 0.847300 | 1.261734e-59 | -8.615850e-47 |
| Msa0706580 | Msa1258940 | 0.811134 | 8.148294e-51 | -8.615850e-47 |
| Msa0706580 | Msa1261340 | 0.811716 | 6.090260e-51 | -8.615850e-47 |
| Msa0706580 | Msa1261360 | 0.812318 | 4.502424e-51 | -8.615850e-47 |
| Msa0706580 | Msa1261370 | 0.812276 | 4.599848e-51 | -8.615850e-47 |
| Msa0706580 | Msa1261400 | 0.812716 | 3.685066e-51 | -8.615850e-47 |
| Msa0706580 | Msa1271490 | 0.826749 | 2.286400e-54 | -8.615850e-47 |
| Msa0706580 | Msa1271510 | 0.847343 | 1.228229e-59 | -8.615850e-47 |
| Msa0706580 | Msa1271600 | 0.849078 | 4.072194e-60 | -8.615850e-47 |
| Msa0706580 | Msa1274740 | 0.845647 | 3.565217e-59 | -8.615850e-47 |
| Msa0706580 | Msa1279700 | 0.840898 | 6.586688e-58 | -8.615850e-47 |
| Msa0706580 | Msa1293530 | 0.847861 | 8.844975e-60 | -8.615850e-47 |
| Msa0706580 | Msa1302750 | 0.800372 | 1.486709e-48 | -8.615850e-47 |
| Msa0706580 | Msa1305520 | 0.813647 | 2.302154e-51 | -8.615850e-47 |
| Msa0706580 | Msa1305650 | 0.831437 | 1.670666e-55 | -8.615850e-47 |
| Msa0706580 | Msa1307370 | 0.839980 | 1.144892e-57 | -8.615850e-47 |
| Msa0706580 | Msa1309360 | 0.826847 | 2.166598e-54 | -8.615850e-47 |
| Msa0706580 | Msa1312730 | 0.847130 | 1.405263e-59 | -8.615850e-47 |
| Msa0706580 | Msa1315980 | 0.825489 | 4.559250e-54 | -8.615850e-47 |
| Msa0706580 | Msa1324940 | 0.805150 | 1.533979e-49 | -8.615850e-47 |
| Msa0706580 | Msa1325650 | 0.846940 | 1.583498e-59 | -8.615850e-47 |
| Msa0706580 | Msa1325980 | 0.804669 | 1.933450e-49 | -8.615850e-47 |
| Msa0706580 | Msa1329290 | 0.824094 | 9.723975e-54 | -8.615850e-47 |
| Msa0706580 | Msa1336320 | 0.822674 | 2.087354e-53 | -8.615850e-47 |
| Msa0706580 | Msa1354040 | 0.810763 | 9.804757e-51 | -8.615850e-47 |
| Msa0706580 | Msa1356200 | 0.808297 | 3.318748e-50 | -8.615850e-47 |
| Msa0706580 | Msa1361840 | 0.873896 | 1.030611e-67 | -8.615850e-47 |
| Msa0706580 | Msa1365810 | 0.811014 | 8.652446e-51 | -8.615850e-47 |
| Msa0706580 | Msa1365870 | 0.832999 | 6.859538e-56 | -8.615850e-47 |
| Msa0706580 | Msa1367600 | 0.801264 | 9.775625e-49 | -8.615850e-47 |
| Msa0706580 | Msa1367810 | 0.844269 | 8.391831e-59 | -8.615850e-47 |
| Msa0706580 | Msa1368730 | 0.814310 | 1.644231e-51 | -8.615850e-47 |
| Msa0706580 | Msa1374810 | 0.811240 | 7.728873e-51 | -8.615850e-47 |
| Msa0706580 | Msa1375630 | 0.813946 | 1.978431e-51 | -8.615850e-47 |
| Msa0706580 | Msa1376530 | 0.809515 | 1.821515e-50 | -8.615850e-47 |
| Msa0706580 | Msa1376640 | 0.803098 | 4.098523e-49 | -8.615850e-47 |
| Msa0706580 | Msa1379980 | 0.825858 | 3.727023e-54 | -8.615850e-47 |
| Msa0706580 | Msa1382310 | 0.801453 | 8.941730e-49 | -8.615850e-47 |
| Msa0706580 | Msa1391430 | 0.802358 | 5.826396e-49 | -8.615850e-47 |
| Msa0706580 | Msa1393200 | 0.814593 | 1.423589e-51 | -8.615850e-47 |
| Msa0706580 | Msa1398740 | 0.816276 | 6.010038e-52 | -8.615850e-47 |
| Msa0706580 | Msa1398840 | 0.871671 | 5.723546e-67 | -8.615850e-47 |
| Msa0706580 | Msa1404370 | 0.822477 | 2.319906e-53 | -8.615850e-47 |
| Msa0706580 | Msa1405770 | 0.806652 | 7.414690e-50 | -8.615850e-47 |
| Msa0706580 | Msa1406550 | 0.814811 | 1.273540e-51 | -8.615850e-47 |
| Msa0706580 | Msa1407710 | 0.858529 | 7.739579e-63 | -8.615850e-47 |
| Msa0706580 | Msa1410170 | 0.818078 | 2.365015e-52 | -8.615850e-47 |
| Msa0706580 | Msa1411690 | 0.802463 | 5.543714e-49 | -8.615850e-47 |
| Msa0706580 | Msa1415250 | 0.881744 | 1.860688e-70 | -8.615850e-47 |
| Msa0706580 | Msa1416460 | 0.815653 | 8.280088e-52 | -8.615850e-47 |
| Msa0706580 | Msa1418600 | 0.809874 | 1.524777e-50 | -8.615850e-47 |
| Msa0706580 | Msa1421810 | 0.825619 | 4.247259e-54 | -8.615850e-47 |
| Msa0706580 | Msa1422490 | 0.819150 | 1.350821e-52 | -8.615850e-47 |
| Msa0706580 | Msa1423550 | 0.814881 | 1.229095e-51 | -8.615850e-47 |
| Msa0706580 | Msa1424240 | 0.853132 | 2.925004e-61 | -8.615850e-47 |
| Msa0706580 | Msa1427390 | 0.806674 | 7.336113e-50 | -8.615850e-47 |
| Msa0706580 | Msa1430270 | 0.826536 | 2.570140e-54 | -8.615850e-47 |
| Msa0706580 | Msa1431960 | 0.815611 | 8.461388e-52 | -8.615850e-47 |
| Msa0706580 | Msa1432470 | 0.808737 | 2.673393e-50 | -8.615850e-47 |
| Msa0706580 | Msa1435050 | 0.818608 | 1.793248e-52 | -8.615850e-47 |
| Msa0706580 | Msa1437320 | 0.834725 | 2.537884e-56 | -8.615850e-47 |
| Msa0706580 | Msa1439670 | 0.815324 | 9.802132e-52 | -8.615850e-47 |
| Msa0706580 | Msa1439680 | 0.833155 | 6.273707e-56 | -8.615850e-47 |
| Msa0706580 | Msa1442030 | 0.827451 | 1.553199e-54 | -8.615850e-47 |
| Msa0706580 | Msa1442300 | 0.839644 | 1.400946e-57 | -8.615850e-47 |
| Msa0706580 | Msa1447230 | 0.827813 | 1.271159e-54 | -8.615850e-47 |
| Msa0706580 | Msa1449680 | 0.814961 | 1.180018e-51 | -8.615850e-47 |
| Msa0706580 | Msa1451840 | 0.808046 | 3.753114e-50 | -8.615850e-47 |
| Msa0706580 | Msa1458330 | 0.845801 | 3.238254e-59 | -8.615850e-47 |
| Msa0706580 | Msa1460650 | 0.837711 | 4.423952e-57 | -8.615850e-47 |
| Msa0706580 | Msa1464800 | 0.800318 | 1.524372e-48 | -8.615850e-47 |
| Msa0121650 | Msa0706580 | 0.836761 | 7.741587e-57 | -8.615850e-47 |
| Msa0125800 | Msa0706580 | 0.868744 | 5.200424e-66 | -8.615850e-47 |
| Msa0135980 | Msa0706580 | 0.827047 | 1.940533e-54 | -8.615850e-47 |
| Msa0137030 | Msa0706580 | 0.875300 | 3.434210e-68 | -8.615850e-47 |
| Msa0137600 | Msa0706580 | 0.861326 | 1.110046e-63 | -8.615850e-47 |
| Msa0141430 | Msa0706580 | 0.832132 | 1.125567e-55 | -8.615850e-47 |
| Msa0141830 | Msa0706580 | 0.837466 | 5.112546e-57 | -8.615850e-47 |
| Msa0143490 | Msa0706580 | 0.801869 | 7.345993e-49 | -8.615850e-47 |
| Msa0144340 | Msa0706580 | 0.809031 | 2.312719e-50 | -8.615850e-47 |
| Msa0146470 | Msa0706580 | 0.815008 | 1.152156e-51 | -8.615850e-47 |
| Msa0150210 | Msa0706580 | 0.822656 | 2.107854e-53 | -8.615850e-47 |
| Msa0151790 | Msa0706580 | 0.826806 | 2.215944e-54 | -8.615850e-47 |
| Msa0152380 | Msa0706580 | 0.819099 | 1.387692e-52 | -8.615850e-47 |
| Msa0155550 | Msa0706580 | 0.835322 | 1.795429e-56 | -8.615850e-47 |
| Msa0157020 | Msa0706580 | 0.816864 | 4.438214e-52 | -8.615850e-47 |
| Msa0157350 | Msa0706580 | 0.835187 | 1.941912e-56 | -8.615850e-47 |
| Msa0170440 | Msa0706580 | 0.867225 | 1.601113e-65 | -8.615850e-47 |
| Msa0173610 | Msa0706580 | 0.810748 | 9.879522e-51 | -8.615850e-47 |
| Msa0175280 | Msa0706580 | 0.853203 | 2.790271e-61 | -8.615850e-47 |
| Msa0177280 | Msa0706580 | 0.840689 | 7.472459e-58 | -8.615850e-47 |
| Msa0181010 | Msa0706580 | 0.800979 | 1.117593e-48 | -8.615850e-47 |
| Msa0182270 | Msa0706580 | 0.871945 | 4.639163e-67 | -8.615850e-47 |
| Msa0185700 | Msa0706580 | 0.807625 | 4.613885e-50 | -8.615850e-47 |
| Msa0193000 | Msa0706580 | 0.810329 | 1.216605e-50 | -8.615850e-47 |
| Msa0197900 | Msa0706580 | 0.828852 | 7.140760e-55 | -8.615850e-47 |
| Msa0203520 | Msa0706580 | 0.805250 | 1.461846e-49 | -8.615850e-47 |
| Msa0204030 | Msa0706580 | 0.805752 | 1.146839e-49 | -8.615850e-47 |
| Msa0206970 | Msa0706580 | 0.807103 | 5.952872e-50 | -8.615850e-47 |
| Msa0214730 | Msa0706580 | 0.808420 | 3.125336e-50 | -8.615850e-47 |
| Msa0223280 | Msa0706580 | 0.832964 | 6.998118e-56 | -8.615850e-47 |
| Msa0223390 | Msa0706580 | 0.820467 | 6.753132e-53 | -8.615850e-47 |
| Msa0224960 | Msa0706580 | 0.806907 | 6.549279e-50 | -8.615850e-47 |
| Msa0225010 | Msa0706580 | 0.816235 | 6.138464e-52 | -8.615850e-47 |
| Msa0367370 | Msa0706580 | 0.853260 | 2.688077e-61 | -8.615850e-47 |
| Msa0368430 | Msa0706580 | 0.834436 | 3.001005e-56 | -8.615850e-47 |
| Msa0370180 | Msa0706580 | 0.803301 | 3.722252e-49 | -8.615850e-47 |
| Msa0370890 | Msa0706580 | 0.813588 | 2.372804e-51 | -8.615850e-47 |
| Msa0377560 | Msa0706580 | 0.823165 | 1.603973e-53 | -8.615850e-47 |
| Msa0377630 | Msa0706580 | 0.818581 | 1.818812e-52 | -8.615850e-47 |
| Msa0379110 | Msa0706580 | 0.844038 | 9.682660e-59 | -8.615850e-47 |
| Msa0379390 | Msa0706580 | 0.879040 | 1.723488e-69 | -8.615850e-47 |
| Msa0379450 | Msa0706580 | 0.861512 | 9.737027e-64 | -8.615850e-47 |
| Msa0380060 | Msa0706580 | 0.805244 | 1.466171e-49 | -8.615850e-47 |
| Msa0380420 | Msa0706580 | 0.814731 | 1.327059e-51 | -8.615850e-47 |
| Msa0382290 | Msa0706580 | 0.849173 | 3.832459e-60 | -8.615850e-47 |
| Msa0382500 | Msa0706580 | 0.841421 | 4.800285e-58 | -8.615850e-47 |
| Msa0399180 | Msa0706580 | 0.842238 | 2.921728e-58 | -8.615850e-47 |
| Msa0415050 | Msa0706580 | 0.823781 | 1.151265e-53 | -8.615850e-47 |
| Msa0415460 | Msa0706580 | 0.815695 | 8.102722e-52 | -8.615850e-47 |
| Msa0415930 | Msa0706580 | 0.855708 | 5.261373e-62 | -8.615850e-47 |
| Msa0417630 | Msa0706580 | 0.860419 | 2.093309e-63 | -8.615850e-47 |
| Msa0418480 | Msa0706580 | 0.824995 | 5.966275e-54 | -8.615850e-47 |
| Msa0421790 | Msa0706580 | 0.818502 | 1.895816e-52 | -8.615850e-47 |
| Msa0426730 | Msa0706580 | 0.821972 | 3.038220e-53 | -8.615850e-47 |
| Msa0427590 | Msa0706580 | 0.818548 | 1.851179e-52 | -8.615850e-47 |
| Msa0429270 | Msa0706580 | 0.816621 | 5.030716e-52 | -8.615850e-47 |
| Msa0429520 | Msa0706580 | -0.807373 | 5.218724e-50 | -8.615850e-47 |
| Msa0429530 | Msa0706580 | -0.822850 | 1.899921e-53 | -8.615850e-47 |
| Msa0431800 | Msa0706580 | 0.828385 | 9.259787e-55 | -8.615850e-47 |
| Msa0432680 | Msa0706580 | 0.844141 | 9.084498e-59 | -8.615850e-47 |
| Msa0436450 | Msa0706580 | 0.824212 | 9.121425e-54 | -8.615850e-47 |
| Msa0446480 | Msa0706580 | 0.817447 | 3.282721e-52 | -8.615850e-47 |
| Msa0450780 | Msa0706580 | 0.828761 | 7.509789e-55 | -8.615850e-47 |
| Msa0450860 | Msa0706580 | 0.824791 | 6.665945e-54 | -8.615850e-47 |
| Msa0455200 | Msa0706580 | 0.815468 | 9.105298e-52 | -8.615850e-47 |
| Msa0465860 | Msa0706580 | 0.831237 | 1.870098e-55 | -8.615850e-47 |
| Msa0467890 | Msa0706580 | 0.802686 | 4.986416e-49 | -8.615850e-47 |
| Msa0471700 | Msa0706580 | 0.800209 | 1.604740e-48 | -8.615850e-47 |
| Msa0475130 | Msa0706580 | 0.805818 | 1.110811e-49 | -8.615850e-47 |
| Msa0480150 | Msa0706580 | 0.853334 | 2.560287e-61 | -8.615850e-47 |
| Msa0239660 | Msa0706580 | 0.828427 | 9.046555e-55 | -8.615850e-47 |
| Msa0247310 | Msa0706580 | 0.873887 | 1.037837e-67 | -8.615850e-47 |
| Msa0249270 | Msa0706580 | 0.804760 | 1.850908e-49 | -8.615850e-47 |
| Msa0255990 | Msa0706580 | 0.837007 | 6.699491e-57 | -8.615850e-47 |
| Msa0257130 | Msa0706580 | 0.850950 | 1.219114e-60 | -8.615850e-47 |
| Msa0259980 | Msa0706580 | 0.834375 | 3.108747e-56 | -8.615850e-47 |
| Msa0269830 | Msa0706580 | 0.820485 | 6.692491e-53 | -8.615850e-47 |
| Msa0277640 | Msa0706580 | 0.830420 | 2.965879e-55 | -8.615850e-47 |
| Msa0280120 | Msa0706580 | 0.824268 | 8.849725e-54 | -8.615850e-47 |
| Msa0280140 | Msa0706580 | 0.853766 | 1.923554e-61 | -8.615850e-47 |
| Msa0285740 | Msa0706580 | 0.833936 | 4.003829e-56 | -8.615850e-47 |
| Msa0302660 | Msa0706580 | 0.812905 | 3.349890e-51 | -8.615850e-47 |
| Msa0308430 | Msa0706580 | 0.842259 | 2.884417e-58 | -8.615850e-47 |
| Msa0313800 | Msa0706580 | 0.810089 | 1.370652e-50 | -8.615850e-47 |
| Msa0314790 | Msa0706580 | 0.801005 | 1.104205e-48 | -8.615850e-47 |
| Msa0317260 | Msa0706580 | 0.830515 | 2.811513e-55 | -8.615850e-47 |
| Msa0323990 | Msa0706580 | 0.828287 | 9.774078e-55 | -8.615850e-47 |
| Msa0334780 | Msa0706580 | 0.858099 | 1.039608e-62 | -8.615850e-47 |
| Msa0339860 | Msa0706580 | 0.837440 | 5.192471e-57 | -8.615850e-47 |
| Msa0342620 | Msa0706580 | 0.813337 | 2.693873e-51 | -8.615850e-47 |
| Msa0343920 | Msa0706580 | 0.804242 | 2.372598e-49 | -8.615850e-47 |
| Msa0351510 | Msa0706580 | 0.806434 | 8.239970e-50 | -8.615850e-47 |
| Msa0358230 | Msa0706580 | 0.824368 | 8.382432e-54 | -8.615850e-47 |
| Msa0362840 | Msa0706580 | 0.840130 | 1.046675e-57 | -8.615850e-47 |
| Msa0485280 | Msa0706580 | 0.812968 | 3.245135e-51 | -8.615850e-47 |
| Msa0486200 | Msa0706580 | 0.806769 | 7.002242e-50 | -8.615850e-47 |
| Msa0503120 | Msa0706580 | 0.821916 | 3.129862e-53 | -8.615850e-47 |
| Msa0510230 | Msa0706580 | 0.840685 | 7.491430e-58 | -8.615850e-47 |
| Msa0510540 | Msa0706580 | 0.819177 | 1.331976e-52 | -8.615850e-47 |
| Msa0515090 | Msa0706580 | 0.802791 | 4.743093e-49 | -8.615850e-47 |
| Msa0518160 | Msa0706580 | 0.809258 | 2.068023e-50 | -8.615850e-47 |
| Msa0519200 | Msa0706580 | 0.814920 | 1.204892e-51 | -8.615850e-47 |
| Msa0520730 | Msa0706580 | 0.814249 | 1.695925e-51 | -8.615850e-47 |
| Msa0524020 | Msa0706580 | 0.804002 | 2.662582e-49 | -8.615850e-47 |
| Msa0526130 | Msa0706580 | 0.846582 | 1.984220e-59 | -8.615850e-47 |
| Msa0528870 | Msa0706580 | 0.802221 | 6.218756e-49 | -8.615850e-47 |
| Msa0532840 | Msa0706580 | 0.821701 | 3.509604e-53 | -8.615850e-47 |
| Msa0533010 | Msa0706580 | 0.816205 | 6.235124e-52 | -8.615850e-47 |
| Msa0537270 | Msa0706580 | 0.816289 | 5.971310e-52 | -8.615850e-47 |
| Msa0538570 | Msa0706580 | 0.808002 | 3.836538e-50 | -8.615850e-47 |
| Msa0546380 | Msa0706580 | 0.817209 | 3.713342e-52 | -8.615850e-47 |
| Msa0546740 | Msa0706580 | 0.820987 | 5.129410e-53 | -8.615850e-47 |
| Msa0547050 | Msa0706580 | 0.813994 | 1.930593e-51 | -8.615850e-47 |
| Msa0550280 | Msa0706580 | 0.802672 | 5.020614e-49 | -8.615850e-47 |
| Msa0555940 | Msa0706580 | 0.844076 | 9.459142e-59 | -8.615850e-47 |
| Msa0567290 | Msa0706580 | 0.861551 | 9.477643e-64 | -8.615850e-47 |
| Msa0578900 | Msa0706580 | 0.815059 | 1.122546e-51 | -8.615850e-47 |
| Msa0581460 | Msa0706580 | 0.840345 | 9.194221e-58 | -8.615850e-47 |
| Msa0593710 | Msa0706580 | 0.820047 | 8.428963e-53 | -8.615850e-47 |
| Msa0594390 | Msa0706580 | 0.800094 | 1.693259e-48 | -8.615850e-47 |
| Msa0594610 | Msa0706580 | -0.808590 | 2.873672e-50 | -8.615850e-47 |
| Msa0600390 | Msa0706580 | 0.804572 | 2.026036e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706580 | MtrunA17_Chr8g0385881 | 97.122 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 2.07e-95 | 271 |
| Msa0706580 | MtrunA17_Chr2g0286471 | 47.552 | 143 | 65 | 4 | 1 | 138 | 1 | 138 | 3.23e-38 | 126 |
| Msa0706580 | MtrunA17_Chr2g0286481 | 51.220 | 123 | 52 | 4 | 22 | 138 | 18 | 138 | 4.16e-34 | 115 |
| Msa0706580 | MtrunA17_Chr1g0191251 | 50.000 | 80 | 35 | 2 | 56 | 133 | 10 | 86 | 6.21e-18 | 73.6 |
| Msa0706580 | MtrunA17_Chr7g0249801 | 45.833 | 72 | 37 | 2 | 61 | 131 | 42 | 112 | 1.35e-11 | 57.8 |
| Msa0706580 | MtrunA17_Chr7g0249561 | 41.772 | 79 | 44 | 2 | 61 | 138 | 53 | 130 | 3.77e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706580 | AT4G25050.1 | 56.115 | 139 | 52 | 4 | 1 | 138 | 1 | 131 | 5.58e-40 | 131 |
| Msa0706580 | AT4G25050.2 | 51.656 | 151 | 52 | 5 | 1 | 138 | 1 | 143 | 1.54e-36 | 122 |
| Msa0706580 | AT3G05020.1 | 50.000 | 136 | 52 | 4 | 4 | 138 | 16 | 136 | 2.95e-34 | 116 |
| Msa0706580 | AT5G27200.1 | 58.163 | 98 | 38 | 2 | 42 | 138 | 42 | 137 | 1.24e-31 | 110 |
| Msa0706580 | AT1G54630.1 | 43.137 | 153 | 53 | 7 | 1 | 138 | 1 | 134 | 2.61e-28 | 101 |
| Msa0706580 | AT1G54580.1 | 57.647 | 85 | 34 | 1 | 54 | 138 | 52 | 134 | 1.17e-26 | 97.4 |
| Msa0706580 | AT1G65290.1 | 41.772 | 79 | 44 | 2 | 61 | 138 | 49 | 126 | 1.71e-11 | 58.2 |
| Msa0706580 | AT1G54630.2 | 53.448 | 58 | 25 | 1 | 54 | 111 | 52 | 107 | 3.21e-11 | 57.0 |
Find 61 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACAAAATTGGCTTATTA+TGG | 0.153308 | 4_4:+79596053 | None:intergenic |
| CACCATGTACCTATATTCTA+TGG | 0.216034 | 4_4:+79594055 | None:intergenic |
| AGTTCTGAAAATTTAGTTTC+TGG | 0.232292 | 4_4:+79594858 | None:intergenic |
| TCTGGGGTAAGCTTGGTTTC+AGG | 0.264840 | 4_4:+79594876 | None:intergenic |
| CATTATCATCCTCAATATTA+AGG | 0.281641 | 4_4:+79594523 | None:intergenic |
| AATACATTGTGAACTGAGTT+AGG | 0.285621 | 4_4:-79594397 | Msa0706580:three_prime_UTR |
| TGTGCTTATGCGTATTCTTT+TGG | 0.292912 | 4_4:-79594338 | Msa0706580:three_prime_UTR |
| CTCACTTTCTCCACTGTCTC+AGG | 0.295443 | 4_4:+79594930 | None:intergenic |
| TCTTTCAGAACTTCAAGTTT+TGG | 0.316075 | 4_4:-79595119 | Msa0706580:CDS |
| GAACAAAATTGGCTTATTAT+GGG | 0.351569 | 4_4:+79596054 | None:intergenic |
| AAAGAAAGATTAAGCTTAAG+AGG | 0.355256 | 4_4:-79594445 | Msa0706580:exon |
| GTTCTGAAAATTTAGTTTCT+GGG | 0.362213 | 4_4:+79594859 | None:intergenic |
| AGGCCATTGTATTGAAGCTT+AGG | 0.372070 | 4_4:+79595910 | None:intergenic |
| GGAAATAGTGATGGGTTTAG+AGG | 0.377032 | 4_4:-79594556 | Msa0706580:CDS |
| AGATAGAATAGTAAGTGATA+TGG | 0.379870 | 4_4:+79595937 | None:intergenic |
| TTAAAGATCCCATAGAATAT+AGG | 0.386492 | 4_4:-79594064 | Msa0706580:three_prime_UTR |
| AGCCATGTCAGGAACAAAAT+TGG | 0.386576 | 4_4:+79596043 | None:intergenic |
| TATGGATTGGGTTGATTAAA+CGG | 0.405450 | 4_4:+79595955 | None:intergenic |
| TTATCTAGCTGGTGCTTAGT+TGG | 0.422462 | 4_4:+79596013 | None:intergenic |
| GAATAGTAAGTGATATGGAT+TGG | 0.457232 | 4_4:+79595942 | None:intergenic |
| TTTAGTTTCTGGGGTAAGCT+TGG | 0.464049 | 4_4:+79594869 | None:intergenic |
| ATGGAACATTGCCATAATCT+TGG | 0.469205 | 4_4:+79594182 | None:intergenic |
| TACGCATAAGCACAAATAAG+AGG | 0.474753 | 4_4:+79594347 | None:intergenic |
| AACTTTCTAAAACCCACATT+AGG | 0.476053 | 4_4:+79594152 | None:intergenic |
| CAAATCAGCTGCTTGTTGAA+TGG | 0.477053 | 4_4:+79594485 | None:intergenic |
| CCTCTTTCAATTTCTCTACA+AGG | 0.482096 | 4_4:-79595857 | Msa0706580:CDS |
| AATAGTAAGTGATATGGATT+GGG | 0.482864 | 4_4:+79595943 | None:intergenic |
| TTCCATCCTTGTGCCTAATG+TGG | 0.493817 | 4_4:-79594165 | Msa0706580:three_prime_UTR |
| TGTCTGTTAAAAGAAGTAAG+AGG | 0.500233 | 4_4:-79594034 | Msa0706580:three_prime_UTR |
| TTGGAAAGTAAAGCCATGTC+AGG | 0.506514 | 4_4:+79596032 | None:intergenic |
| AGAGTTTAACCTTAATATTG+AGG | 0.511328 | 4_4:-79594532 | Msa0706580:CDS |
| GAAATTGAAAGAGGGTTGAA+AGG | 0.517599 | 4_4:+79595866 | None:intergenic |
| AGATAAGTGTGTTATCTAGC+TGG | 0.519327 | 4_4:+79596002 | None:intergenic |
| GTCTGTTAAAAGAAGTAAGA+GGG | 0.523998 | 4_4:-79594033 | Msa0706580:three_prime_UTR |
| TTCTGAAAATTTAGTTTCTG+GGG | 0.526211 | 4_4:+79594860 | None:intergenic |
| CCTTGTAGAGAAATTGAAAG+AGG | 0.526756 | 4_4:+79595857 | None:intergenic |
| ATTGTTATTTGTTGCAAGCA+TGG | 0.532884 | 4_4:-79594275 | Msa0706580:three_prime_UTR |
| AACAAAATTGGCTTATTATG+GGG | 0.535892 | 4_4:+79596055 | None:intergenic |
| AGAGGGTTGAAAGGTAAGAG+AGG | 0.538850 | 4_4:+79595875 | None:intergenic |
| AAGAGAGGTGGTTGAAAGAG+AGG | 0.539433 | 4_4:+79595890 | None:intergenic |
| ATACATTGTGAACTGAGTTA+GGG | 0.539752 | 4_4:-79594396 | Msa0706580:three_prime_UTR |
| TCCATCCTTGTGCCTAATGT+GGG | 0.545236 | 4_4:-79594164 | Msa0706580:three_prime_UTR |
| TCGTAATTAGAGTTCGATAC+GGG | 0.561650 | 4_4:+79594005 | None:intergenic |
| AAACGAGAAGATCTCAAAGA+AGG | 0.566334 | 4_4:+79595062 | None:intergenic |
| ACAATTTAACCAAGTTACAA+TGG | 0.568659 | 4_4:+79594293 | None:intergenic |
| CTTCCTAAGCTTCAATACAA+TGG | 0.568743 | 4_4:-79595913 | Msa0706580:exon |
| GGGTTGAAAGGTAAGAGAGG+TGG | 0.569945 | 4_4:+79595878 | None:intergenic |
| GTGGCAGGTGGAAATAGTGA+TGG | 0.572304 | 4_4:-79594565 | Msa0706580:intron |
| TGAACCCAATGGAAGCTCTA+CGG | 0.572437 | 4_4:-79594422 | Msa0706580:three_prime_UTR |
| GTCGTAATTAGAGTTCGATA+CGG | 0.574024 | 4_4:+79594004 | None:intergenic |
| CTTGTAGAGAAATTGAAAGA+GGG | 0.583035 | 4_4:+79595858 | None:intergenic |
| TCAGGCACAACCTGAGACAG+TGG | 0.583358 | 4_4:-79594940 | Msa0706580:CDS |
| TCCCATAGAATATAGGTACA+TGG | 0.589312 | 4_4:-79594057 | Msa0706580:three_prime_UTR |
| ACCCACATTAGGCACAAGGA+TGG | 0.589368 | 4_4:+79594163 | None:intergenic |
| ACCATGTACCTATATTCTAT+GGG | 0.590623 | 4_4:+79594056 | None:intergenic |
| TTTCTCTACAAGGACTAACC+AGG | 0.601936 | 4_4:-79595847 | Msa0706580:intron |
| AGCTTAAGAGGTGAACCCAA+TGG | 0.610757 | 4_4:-79594433 | Msa0706580:three_prime_UTR |
| TAAAACCCACATTAGGCACA+AGG | 0.633907 | 4_4:+79594159 | None:intergenic |
| TGGCAGGTGGAAATAGTGAT+GGG | 0.642802 | 4_4:-79594564 | Msa0706580:intron |
| TCAAACTTACTGCACAAATG+CGG | 0.672194 | 4_4:+79595039 | None:intergenic |
| TGTTAAAAGAAGTAAGAGGG+AGG | 0.674679 | 4_4:-79594030 | Msa0706580:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTAAAAGATTC+AGG | - | chr4_4:79595106-79595125 | Msa0706580:CDS | 10.0% |
| !!! | AATTTTTTTTTAAAAGATTC+AGG | - | chr4_4:79595106-79595125 | Msa0706580:CDS | 10.0% |
| !!! | GTTTTAATACTTTTTTTATG+AGG | - | chr4_4:79594870-79594889 | Msa0706580:CDS | 15.0% |
| !!! | ATCATCAGTAAATTTATTTT+TGG | - | chr4_4:79595694-79595713 | Msa0706580:intron | 15.0% |
| !!! | GTTTTAATACTTTTTTTATG+AGG | - | chr4_4:79594870-79594889 | Msa0706580:CDS | 15.0% |
| !!! | ATCATCAGTAAATTTATTTT+TGG | - | chr4_4:79595694-79595713 | Msa0706580:intron | 15.0% |
| !! | ATTTGTATTTACACTTCAAT+AGG | - | chr4_4:79594288-79594307 | Msa0706580:three_prime_UTR | 20.0% |
| !!! | AAAAAATGTTACTATGCTTT+TGG | - | chr4_4:79594421-79594440 | Msa0706580:three_prime_UTR | 20.0% |
| !! | ACATACACATTAATATGTTA+AGG | - | chr4_4:79594652-79594671 | Msa0706580:intron | 20.0% |
| !!! | ACATTAATATGTTAAGGTTT+TGG | - | chr4_4:79594658-79594677 | Msa0706580:intron | 20.0% |
| !!! | TGTTTTGTTGTTTTTCTATT+TGG | - | chr4_4:79594710-79594729 | Msa0706580:intron | 20.0% |
| !! | ATAAACAACAATTATCGTAT+AGG | - | chr4_4:79594733-79594752 | Msa0706580:intron | 20.0% |
| !! | TGAAAATAACTTATGAACAA+CGG | - | chr4_4:79594848-79594867 | Msa0706580:CDS | 20.0% |
| !!! | AGTGAAAATTTTAATTTGAG+TGG | - | chr4_4:79594902-79594921 | Msa0706580:CDS | 20.0% |
| !! | AAGTCAAAATGAATTTCAAA+GGG | + | chr4_4:79595053-79595072 | None:intergenic | 20.0% |
| !! | AAAGTCAAAATGAATTTCAA+AGG | + | chr4_4:79595054-79595073 | None:intergenic | 20.0% |
| !!! | ATTATTGGTTTTGATTTTGA+TGG | - | chr4_4:79595379-79595398 | Msa0706580:intron | 20.0% |
| !!! | TGATTGATTCTTAATTAATG+TGG | - | chr4_4:79595480-79595499 | Msa0706580:intron | 20.0% |
| !!! | ATATTTTTTCCATTGTAACT+TGG | - | chr4_4:79595762-79595781 | Msa0706580:intron | 20.0% |
| !! | ATTTGTATTTACACTTCAAT+AGG | - | chr4_4:79594288-79594307 | Msa0706580:three_prime_UTR | 20.0% |
| !!! | AAAAAATGTTACTATGCTTT+TGG | - | chr4_4:79594421-79594440 | Msa0706580:three_prime_UTR | 20.0% |
| !! | ACATACACATTAATATGTTA+AGG | - | chr4_4:79594652-79594671 | Msa0706580:intron | 20.0% |
| !!! | ACATTAATATGTTAAGGTTT+TGG | - | chr4_4:79594658-79594677 | Msa0706580:intron | 20.0% |
| !!! | TGTTTTGTTGTTTTTCTATT+TGG | - | chr4_4:79594710-79594729 | Msa0706580:intron | 20.0% |
| !! | ATAAACAACAATTATCGTAT+AGG | - | chr4_4:79594733-79594752 | Msa0706580:intron | 20.0% |
| !! | TGAAAATAACTTATGAACAA+CGG | - | chr4_4:79594848-79594867 | Msa0706580:CDS | 20.0% |
| !!! | AGTGAAAATTTTAATTTGAG+TGG | - | chr4_4:79594902-79594921 | Msa0706580:CDS | 20.0% |
| !! | AAGTCAAAATGAATTTCAAA+GGG | + | chr4_4:79595053-79595072 | None:intergenic | 20.0% |
| !! | AAAGTCAAAATGAATTTCAA+AGG | + | chr4_4:79595054-79595073 | None:intergenic | 20.0% |
| !!! | ATTATTGGTTTTGATTTTGA+TGG | - | chr4_4:79595379-79595398 | Msa0706580:intron | 20.0% |
| !!! | TGATTGATTCTTAATTAATG+TGG | - | chr4_4:79595480-79595499 | Msa0706580:intron | 20.0% |
| !!! | ATATTTTTTCCATTGTAACT+TGG | - | chr4_4:79595762-79595781 | Msa0706580:intron | 20.0% |
| !! | AACAAAATTGGCTTATTATG+GGG | + | chr4_4:79594012-79594031 | None:intergenic | 25.0% |
| !! | GAACAAAATTGGCTTATTAT+GGG | + | chr4_4:79594013-79594032 | None:intergenic | 25.0% |
| ! | AATAGTAAGTGATATGGATT+GGG | + | chr4_4:79594124-79594143 | None:intergenic | 25.0% |
| ! | AGATAGAATAGTAAGTGATA+TGG | + | chr4_4:79594130-79594149 | None:intergenic | 25.0% |
| ! | AACATTGCATACAATAAATG+TGG | + | chr4_4:79594390-79594409 | None:intergenic | 25.0% |
| ! | ATTAAATGCATGAAATGACT+TGG | - | chr4_4:79594451-79594470 | Msa0706580:exon | 25.0% |
| !!! | TCCAAAAGTGGTTTATTTTT+CGG | + | chr4_4:79594489-79594508 | None:intergenic | 25.0% |
| ! | TATAGAGAAATTTCCAAAAG+TGG | + | chr4_4:79594501-79594520 | None:intergenic | 25.0% |
| ! | AGTATATAGCATAGTTACAT+TGG | - | chr4_4:79594606-79594625 | Msa0706580:intron | 25.0% |
| !!! | AATACTTTTTTTATGAGGTG+AGG | - | chr4_4:79594875-79594894 | Msa0706580:CDS | 25.0% |
| !!! | TGACTTTTAAAAAACTTGCA+AGG | - | chr4_4:79595067-79595086 | Msa0706580:CDS | 25.0% |
| !! | TTCTGAAAATTTAGTTTCTG+GGG | + | chr4_4:79595207-79595226 | None:intergenic | 25.0% |
| !!! | GTTCTGAAAATTTAGTTTCT+GGG | + | chr4_4:79595208-79595227 | None:intergenic | 25.0% |
| !!! | AGTTCTGAAAATTTAGTTTC+TGG | + | chr4_4:79595209-79595228 | None:intergenic | 25.0% |
| !! | GAAACTAAATTTTCAGAACT+TGG | - | chr4_4:79595209-79595228 | Msa0706580:intron | 25.0% |
| ! | AAAAAAATATTGTACTCCGT+TGG | - | chr4_4:79595312-79595331 | Msa0706580:intron | 25.0% |
| ! | AAAACCAATAATGTTCATTC+AGG | + | chr4_4:79595371-79595390 | None:intergenic | 25.0% |
| ! | AGAGTTTAACCTTAATATTG+AGG | - | chr4_4:79595532-79595551 | Msa0706580:intron | 25.0% |
| ! | CATTATCATCCTCAATATTA+AGG | + | chr4_4:79595544-79595563 | None:intergenic | 25.0% |
| ! | AAAGAAAGATTAAGCTTAAG+AGG | - | chr4_4:79595619-79595638 | Msa0706580:intron | 25.0% |
| ! | ACAATTTAACCAAGTTACAA+TGG | + | chr4_4:79595774-79595793 | None:intergenic | 25.0% |
| !!! | AAGCATGTTATTTGCTTTTT+AGG | - | chr4_4:79595859-79595878 | Msa0706580:CDS | 25.0% |
| ! | TTAAAGATCCCATAGAATAT+AGG | - | chr4_4:79596000-79596019 | Msa0706580:five_prime_UTR | 25.0% |
| !! | AACAAAATTGGCTTATTATG+GGG | + | chr4_4:79594012-79594031 | None:intergenic | 25.0% |
| !! | GAACAAAATTGGCTTATTAT+GGG | + | chr4_4:79594013-79594032 | None:intergenic | 25.0% |
| ! | AATAGTAAGTGATATGGATT+GGG | + | chr4_4:79594124-79594143 | None:intergenic | 25.0% |
| ! | AGATAGAATAGTAAGTGATA+TGG | + | chr4_4:79594130-79594149 | None:intergenic | 25.0% |
| ! | AACATTGCATACAATAAATG+TGG | + | chr4_4:79594390-79594409 | None:intergenic | 25.0% |
| ! | ATTAAATGCATGAAATGACT+TGG | - | chr4_4:79594451-79594470 | Msa0706580:exon | 25.0% |
| !!! | TCCAAAAGTGGTTTATTTTT+CGG | + | chr4_4:79594489-79594508 | None:intergenic | 25.0% |
| ! | TATAGAGAAATTTCCAAAAG+TGG | + | chr4_4:79594501-79594520 | None:intergenic | 25.0% |
| ! | AGTATATAGCATAGTTACAT+TGG | - | chr4_4:79594606-79594625 | Msa0706580:intron | 25.0% |
| !!! | AATACTTTTTTTATGAGGTG+AGG | - | chr4_4:79594875-79594894 | Msa0706580:CDS | 25.0% |
| !!! | TGACTTTTAAAAAACTTGCA+AGG | - | chr4_4:79595067-79595086 | Msa0706580:CDS | 25.0% |
| !! | TTCTGAAAATTTAGTTTCTG+GGG | + | chr4_4:79595207-79595226 | None:intergenic | 25.0% |
| !!! | GTTCTGAAAATTTAGTTTCT+GGG | + | chr4_4:79595208-79595227 | None:intergenic | 25.0% |
| !!! | AGTTCTGAAAATTTAGTTTC+TGG | + | chr4_4:79595209-79595228 | None:intergenic | 25.0% |
| !! | GAAACTAAATTTTCAGAACT+TGG | - | chr4_4:79595209-79595228 | Msa0706580:intron | 25.0% |
| ! | AAAAAAATATTGTACTCCGT+TGG | - | chr4_4:79595312-79595331 | Msa0706580:intron | 25.0% |
| ! | AAAACCAATAATGTTCATTC+AGG | + | chr4_4:79595371-79595390 | None:intergenic | 25.0% |
| ! | AGAGTTTAACCTTAATATTG+AGG | - | chr4_4:79595532-79595551 | Msa0706580:intron | 25.0% |
| ! | CATTATCATCCTCAATATTA+AGG | + | chr4_4:79595544-79595563 | None:intergenic | 25.0% |
| ! | AAAGAAAGATTAAGCTTAAG+AGG | - | chr4_4:79595619-79595638 | Msa0706580:intron | 25.0% |
| ! | ACAATTTAACCAAGTTACAA+TGG | + | chr4_4:79595774-79595793 | None:intergenic | 25.0% |
| !!! | AAGCATGTTATTTGCTTTTT+AGG | - | chr4_4:79595859-79595878 | Msa0706580:CDS | 25.0% |
| ! | TTAAAGATCCCATAGAATAT+AGG | - | chr4_4:79596000-79596019 | Msa0706580:five_prime_UTR | 25.0% |
| ! | GGAACAAAATTGGCTTATTA+TGG | + | chr4_4:79594014-79594033 | None:intergenic | 30.0% |
| TAGTAGTAGTAGTAGTAGTA+AGG | + | chr4_4:79594089-79594108 | None:intergenic | 30.0% | |
| !! | TATGGATTGGGTTGATTAAA+CGG | + | chr4_4:79594112-79594131 | None:intergenic | 30.0% |
| GAATAGTAAGTGATATGGAT+TGG | + | chr4_4:79594125-79594144 | None:intergenic | 30.0% | |
| CTTGTAGAGAAATTGAAAGA+GGG | + | chr4_4:79594209-79594228 | None:intergenic | 30.0% | |
| GTAAGTATATGCATTAAGAG+TGG | + | chr4_4:79594259-79594278 | None:intergenic | 30.0% | |
| GTTTGACATTTGATATGTTG+TGG | - | chr4_4:79594333-79594352 | Msa0706580:three_prime_UTR | 30.0% | |
| ! | TCCGAAAAATAAACCACTTT+TGG | - | chr4_4:79594485-79594504 | Msa0706580:CDS | 30.0% |
| ! | GAGTGTCCAATTGATAATTT+AGG | - | chr4_4:79594570-79594589 | Msa0706580:intron | 30.0% |
| CCAACACCTAAATTATCAAT+TGG | + | chr4_4:79594579-79594598 | None:intergenic | 30.0% | |
| ! | CCAATTGATAATTTAGGTGT+TGG | - | chr4_4:79594576-79594595 | Msa0706580:intron | 30.0% |
| TATAGCATAGTTACATTGGT+AGG | - | chr4_4:79594610-79594629 | Msa0706580:intron | 30.0% | |
| !! | TCTTTCAGAACTTCAAGTTT+TGG | - | chr4_4:79594945-79594964 | Msa0706580:CDS | 30.0% |
| !!! | TTTGATTTTGATGGTGCATT+TGG | - | chr4_4:79595388-79595407 | Msa0706580:intron | 30.0% |
| TGATTCTTAATTAATGTGGC+AGG | - | chr4_4:79595484-79595503 | Msa0706580:intron | 30.0% | |
| AATACATTGTGAACTGAGTT+AGG | - | chr4_4:79595667-79595686 | Msa0706580:intron | 30.0% | |
| ATACATTGTGAACTGAGTTA+GGG | - | chr4_4:79595668-79595687 | Msa0706580:intron | 30.0% | |
| !! | ATTGTTATTTGTTGCAAGCA+TGG | - | chr4_4:79595789-79595808 | Msa0706580:intron | 30.0% |
| !! | AACTTTCTAAAACCCACATT+AGG | + | chr4_4:79595915-79595934 | None:intergenic | 30.0% |
| ACCATGTACCTATATTCTAT+GGG | + | chr4_4:79596011-79596030 | None:intergenic | 30.0% | |
| TGTCTGTTAAAAGAAGTAAG+AGG | - | chr4_4:79596030-79596049 | Msa0706580:five_prime_UTR | 30.0% | |
| GTCTGTTAAAAGAAGTAAGA+GGG | - | chr4_4:79596031-79596050 | Msa0706580:five_prime_UTR | 30.0% | |
| ! | GGAACAAAATTGGCTTATTA+TGG | + | chr4_4:79594014-79594033 | None:intergenic | 30.0% |
| TAGTAGTAGTAGTAGTAGTA+AGG | + | chr4_4:79594089-79594108 | None:intergenic | 30.0% | |
| !! | TATGGATTGGGTTGATTAAA+CGG | + | chr4_4:79594112-79594131 | None:intergenic | 30.0% |
| GAATAGTAAGTGATATGGAT+TGG | + | chr4_4:79594125-79594144 | None:intergenic | 30.0% | |
| CTTGTAGAGAAATTGAAAGA+GGG | + | chr4_4:79594209-79594228 | None:intergenic | 30.0% | |
| GTAAGTATATGCATTAAGAG+TGG | + | chr4_4:79594259-79594278 | None:intergenic | 30.0% | |
| GTTTGACATTTGATATGTTG+TGG | - | chr4_4:79594333-79594352 | Msa0706580:three_prime_UTR | 30.0% | |
| ! | TCCGAAAAATAAACCACTTT+TGG | - | chr4_4:79594485-79594504 | Msa0706580:CDS | 30.0% |
| ! | GAGTGTCCAATTGATAATTT+AGG | - | chr4_4:79594570-79594589 | Msa0706580:intron | 30.0% |
| CCAACACCTAAATTATCAAT+TGG | + | chr4_4:79594579-79594598 | None:intergenic | 30.0% | |
| ! | CCAATTGATAATTTAGGTGT+TGG | - | chr4_4:79594576-79594595 | Msa0706580:intron | 30.0% |
| TATAGCATAGTTACATTGGT+AGG | - | chr4_4:79594610-79594629 | Msa0706580:intron | 30.0% | |
| !! | TCTTTCAGAACTTCAAGTTT+TGG | - | chr4_4:79594945-79594964 | Msa0706580:CDS | 30.0% |
| !!! | TTTGATTTTGATGGTGCATT+TGG | - | chr4_4:79595388-79595407 | Msa0706580:intron | 30.0% |
| TGATTCTTAATTAATGTGGC+AGG | - | chr4_4:79595484-79595503 | Msa0706580:intron | 30.0% | |
| AATACATTGTGAACTGAGTT+AGG | - | chr4_4:79595667-79595686 | Msa0706580:intron | 30.0% | |
| ATACATTGTGAACTGAGTTA+GGG | - | chr4_4:79595668-79595687 | Msa0706580:intron | 30.0% | |
| !! | ATTGTTATTTGTTGCAAGCA+TGG | - | chr4_4:79595789-79595808 | Msa0706580:intron | 30.0% |
| !! | AACTTTCTAAAACCCACATT+AGG | + | chr4_4:79595915-79595934 | None:intergenic | 30.0% |
| ACCATGTACCTATATTCTAT+GGG | + | chr4_4:79596011-79596030 | None:intergenic | 30.0% | |
| TGTCTGTTAAAAGAAGTAAG+AGG | - | chr4_4:79596030-79596049 | Msa0706580:five_prime_UTR | 30.0% | |
| GTCTGTTAAAAGAAGTAAGA+GGG | - | chr4_4:79596031-79596050 | Msa0706580:five_prime_UTR | 30.0% | |
| AGATAAGTGTGTTATCTAGC+TGG | + | chr4_4:79594065-79594084 | None:intergenic | 35.0% | |
| CTTCCTAAGCTTCAATACAA+TGG | - | chr4_4:79594151-79594170 | Msa0706580:intron | 35.0% | |
| GAAATTGAAAGAGGGTTGAA+AGG | + | chr4_4:79594201-79594220 | None:intergenic | 35.0% | |
| CCTTGTAGAGAAATTGAAAG+AGG | + | chr4_4:79594210-79594229 | None:intergenic | 35.0% | |
| CCTCTTTCAATTTCTCTACA+AGG | - | chr4_4:79594207-79594226 | Msa0706580:three_prime_UTR | 35.0% | |
| AGTGGTTAAAACATACATGC+AGG | - | chr4_4:79594920-79594939 | Msa0706580:CDS | 35.0% | |
| !! | AAGTTTTGGTGCAATTTCTG+TGG | - | chr4_4:79594959-79594978 | Msa0706580:intron | 35.0% |
| !! | AGTTTTGGTGCAATTTCTGT+GGG | - | chr4_4:79594960-79594979 | Msa0706580:intron | 35.0% |
| AAACGAGAAGATCTCAAAGA+AGG | + | chr4_4:79595005-79595024 | None:intergenic | 35.0% | |
| TCAAACTTACTGCACAAATG+CGG | + | chr4_4:79595028-79595047 | None:intergenic | 35.0% | |
| ! | ATTGTACTCCGTTGGTTATA+AGG | - | chr4_4:79595320-79595339 | Msa0706580:intron | 35.0% |
| GAACTTGACCTTATAACCAA+CGG | + | chr4_4:79595331-79595350 | None:intergenic | 35.0% | |
| GACACCTGAATGAACATTAT+TGG | - | chr4_4:79595364-79595383 | Msa0706580:intron | 35.0% | |
| ! | TGTTGTTTATGCTAGAGCTA+TGG | - | chr4_4:79595445-79595464 | Msa0706580:intron | 35.0% |
| GTTGTTTATGCTAGAGCTAT+GGG | - | chr4_4:79595446-79595465 | Msa0706580:intron | 35.0% | |
| TTCTTAATTAATGTGGCAGG+TGG | - | chr4_4:79595487-79595506 | Msa0706580:intron | 35.0% | |
| TACGCATAAGCACAAATAAG+AGG | + | chr4_4:79595720-79595739 | None:intergenic | 35.0% | |
| ! | TGTGCTTATGCGTATTCTTT+TGG | - | chr4_4:79595726-79595745 | Msa0706580:intron | 35.0% |
| ! | CTTATGCGTATTCTTTTGGA+AGG | - | chr4_4:79595730-79595749 | Msa0706580:intron | 35.0% |
| !! | TGCTTTTTAGGCCAAGATTA+TGG | - | chr4_4:79595871-79595890 | Msa0706580:CDS | 35.0% |
| ATGGAACATTGCCATAATCT+TGG | + | chr4_4:79595885-79595904 | None:intergenic | 35.0% | |
| TCCCATAGAATATAGGTACA+TGG | - | chr4_4:79596007-79596026 | Msa0706580:five_prime_UTR | 35.0% | |
| CACCATGTACCTATATTCTA+TGG | + | chr4_4:79596012-79596031 | None:intergenic | 35.0% | |
| TGTTAAAAGAAGTAAGAGGG+AGG | - | chr4_4:79596034-79596053 | Msa0706580:five_prime_UTR | 35.0% | |
| TCGTAATTAGAGTTCGATAC+GGG | + | chr4_4:79596062-79596081 | None:intergenic | 35.0% | |
| GTCGTAATTAGAGTTCGATA+CGG | + | chr4_4:79596063-79596082 | None:intergenic | 35.0% | |
| AGATAAGTGTGTTATCTAGC+TGG | + | chr4_4:79594065-79594084 | None:intergenic | 35.0% | |
| CTTCCTAAGCTTCAATACAA+TGG | - | chr4_4:79594151-79594170 | Msa0706580:intron | 35.0% | |
| GAAATTGAAAGAGGGTTGAA+AGG | + | chr4_4:79594201-79594220 | None:intergenic | 35.0% | |
| CCTTGTAGAGAAATTGAAAG+AGG | + | chr4_4:79594210-79594229 | None:intergenic | 35.0% | |
| CCTCTTTCAATTTCTCTACA+AGG | - | chr4_4:79594207-79594226 | Msa0706580:three_prime_UTR | 35.0% | |
| AGTGGTTAAAACATACATGC+AGG | - | chr4_4:79594920-79594939 | Msa0706580:CDS | 35.0% | |
| !! | AAGTTTTGGTGCAATTTCTG+TGG | - | chr4_4:79594959-79594978 | Msa0706580:intron | 35.0% |
| !! | AGTTTTGGTGCAATTTCTGT+GGG | - | chr4_4:79594960-79594979 | Msa0706580:intron | 35.0% |
| AAACGAGAAGATCTCAAAGA+AGG | + | chr4_4:79595005-79595024 | None:intergenic | 35.0% | |
| TCAAACTTACTGCACAAATG+CGG | + | chr4_4:79595028-79595047 | None:intergenic | 35.0% | |
| ! | ATTGTACTCCGTTGGTTATA+AGG | - | chr4_4:79595320-79595339 | Msa0706580:intron | 35.0% |
| GAACTTGACCTTATAACCAA+CGG | + | chr4_4:79595331-79595350 | None:intergenic | 35.0% | |
| GACACCTGAATGAACATTAT+TGG | - | chr4_4:79595364-79595383 | Msa0706580:intron | 35.0% | |
| ! | TGTTGTTTATGCTAGAGCTA+TGG | - | chr4_4:79595445-79595464 | Msa0706580:intron | 35.0% |
| GTTGTTTATGCTAGAGCTAT+GGG | - | chr4_4:79595446-79595465 | Msa0706580:intron | 35.0% | |
| TTCTTAATTAATGTGGCAGG+TGG | - | chr4_4:79595487-79595506 | Msa0706580:intron | 35.0% | |
| TACGCATAAGCACAAATAAG+AGG | + | chr4_4:79595720-79595739 | None:intergenic | 35.0% | |
| ! | TGTGCTTATGCGTATTCTTT+TGG | - | chr4_4:79595726-79595745 | Msa0706580:intron | 35.0% |
| ! | CTTATGCGTATTCTTTTGGA+AGG | - | chr4_4:79595730-79595749 | Msa0706580:intron | 35.0% |
| !! | TGCTTTTTAGGCCAAGATTA+TGG | - | chr4_4:79595871-79595890 | Msa0706580:CDS | 35.0% |
| ATGGAACATTGCCATAATCT+TGG | + | chr4_4:79595885-79595904 | None:intergenic | 35.0% | |
| TCCCATAGAATATAGGTACA+TGG | - | chr4_4:79596007-79596026 | Msa0706580:five_prime_UTR | 35.0% | |
| CACCATGTACCTATATTCTA+TGG | + | chr4_4:79596012-79596031 | None:intergenic | 35.0% | |
| TGTTAAAAGAAGTAAGAGGG+AGG | - | chr4_4:79596034-79596053 | Msa0706580:five_prime_UTR | 35.0% | |
| TCGTAATTAGAGTTCGATAC+GGG | + | chr4_4:79596062-79596081 | None:intergenic | 35.0% | |
| GTCGTAATTAGAGTTCGATA+CGG | + | chr4_4:79596063-79596082 | None:intergenic | 35.0% | |
| ! | AGCCAATTTTGTTCCTGACA+TGG | - | chr4_4:79594019-79594038 | Msa0706580:three_prime_UTR | 40.0% |
| AGCCATGTCAGGAACAAAAT+TGG | + | chr4_4:79594024-79594043 | None:intergenic | 40.0% | |
| TTGGAAAGTAAAGCCATGTC+AGG | + | chr4_4:79594035-79594054 | None:intergenic | 40.0% | |
| TTATCTAGCTGGTGCTTAGT+TGG | + | chr4_4:79594054-79594073 | None:intergenic | 40.0% | |
| AGGCCATTGTATTGAAGCTT+AGG | + | chr4_4:79594157-79594176 | None:intergenic | 40.0% | |
| TTTCTCTACAAGGACTAACC+AGG | - | chr4_4:79594217-79594236 | Msa0706580:three_prime_UTR | 40.0% | |
| GGAAGATGAAAATCTGAACC+TGG | + | chr4_4:79594238-79594257 | None:intergenic | 40.0% | |
| ACACGTGCAAATTAAACGCA+CGG | - | chr4_4:79594539-79594558 | Msa0706580:CDS | 40.0% | |
| !! | TTTAGTTTCTGGGGTAAGCT+TGG | + | chr4_4:79595198-79595217 | None:intergenic | 40.0% |
| !! | GGAAATAGTGATGGGTTTAG+AGG | - | chr4_4:79595508-79595527 | Msa0706580:intron | 40.0% |
| ! | CAAATCAGCTGCTTGTTGAA+TGG | + | chr4_4:79595582-79595601 | None:intergenic | 40.0% |
| ! | TTTTCCGTAGAGCTTCCATT+GGG | + | chr4_4:79595649-79595668 | None:intergenic | 40.0% |
| ! | ATTTTCCGTAGAGCTTCCAT+TGG | + | chr4_4:79595650-79595669 | None:intergenic | 40.0% |
| TAAAACCCACATTAGGCACA+AGG | + | chr4_4:79595908-79595927 | None:intergenic | 40.0% | |
| AGCATACATAAGCCAGGTAA+GGG | - | chr4_4:79595949-79595968 | Msa0706580:five_prime_UTR | 40.0% | |
| ! | ATTGGCTTATTATGGGGTGA+TGG | + | chr4_4:79594006-79594025 | None:intergenic | 40.0% |
| ! | AGCCAATTTTGTTCCTGACA+TGG | - | chr4_4:79594019-79594038 | Msa0706580:three_prime_UTR | 40.0% |
| AGCCATGTCAGGAACAAAAT+TGG | + | chr4_4:79594024-79594043 | None:intergenic | 40.0% | |
| TTGGAAAGTAAAGCCATGTC+AGG | + | chr4_4:79594035-79594054 | None:intergenic | 40.0% | |
| TTATCTAGCTGGTGCTTAGT+TGG | + | chr4_4:79594054-79594073 | None:intergenic | 40.0% | |
| AGGCCATTGTATTGAAGCTT+AGG | + | chr4_4:79594157-79594176 | None:intergenic | 40.0% | |
| TTTCTCTACAAGGACTAACC+AGG | - | chr4_4:79594217-79594236 | Msa0706580:three_prime_UTR | 40.0% | |
| GGAAGATGAAAATCTGAACC+TGG | + | chr4_4:79594238-79594257 | None:intergenic | 40.0% | |
| ACACGTGCAAATTAAACGCA+CGG | - | chr4_4:79594539-79594558 | Msa0706580:CDS | 40.0% | |
| !! | TTTAGTTTCTGGGGTAAGCT+TGG | + | chr4_4:79595198-79595217 | None:intergenic | 40.0% |
| !! | GGAAATAGTGATGGGTTTAG+AGG | - | chr4_4:79595508-79595527 | Msa0706580:intron | 40.0% |
| ! | CAAATCAGCTGCTTGTTGAA+TGG | + | chr4_4:79595582-79595601 | None:intergenic | 40.0% |
| ! | TTTTCCGTAGAGCTTCCATT+GGG | + | chr4_4:79595649-79595668 | None:intergenic | 40.0% |
| ! | ATTTTCCGTAGAGCTTCCAT+TGG | + | chr4_4:79595650-79595669 | None:intergenic | 40.0% |
| TAAAACCCACATTAGGCACA+AGG | + | chr4_4:79595908-79595927 | None:intergenic | 40.0% | |
| AGCATACATAAGCCAGGTAA+GGG | - | chr4_4:79595949-79595968 | Msa0706580:five_prime_UTR | 40.0% | |
| AAGAGAGGTGGTTGAAAGAG+AGG | + | chr4_4:79594177-79594196 | None:intergenic | 45.0% | |
| AGAGGGTTGAAAGGTAAGAG+AGG | + | chr4_4:79594192-79594211 | None:intergenic | 45.0% | |
| CATTTGATATGTTGTGGCGC+AGG | - | chr4_4:79594339-79594358 | Msa0706580:three_prime_UTR | 45.0% | |
| AATTAAACGCACGGACGTGA+AGG | - | chr4_4:79594548-79594567 | Msa0706580:CDS | 45.0% | |
| TGGCAGGTGGAAATAGTGAT+GGG | - | chr4_4:79595500-79595519 | Msa0706580:intron | 45.0% | |
| AGCTTAAGAGGTGAACCCAA+TGG | - | chr4_4:79595631-79595650 | Msa0706580:intron | 45.0% | |
| TGAACCCAATGGAAGCTCTA+CGG | - | chr4_4:79595642-79595661 | Msa0706580:intron | 45.0% | |
| TTCCATCCTTGTGCCTAATG+TGG | - | chr4_4:79595899-79595918 | Msa0706580:exon | 45.0% | |
| TCCATCCTTGTGCCTAATGT+GGG | - | chr4_4:79595900-79595919 | Msa0706580:exon | 45.0% | |
| CCTGGCTTATGTATGCTCTT+TGG | + | chr4_4:79595946-79595965 | None:intergenic | 45.0% | |
| ! | CCAAAGAGCATACATAAGCC+AGG | - | chr4_4:79595943-79595962 | Msa0706580:five_prime_UTR | 45.0% |
| GAGCATACATAAGCCAGGTA+AGG | - | chr4_4:79595948-79595967 | Msa0706580:five_prime_UTR | 45.0% | |
| AAGAGAGGTGGTTGAAAGAG+AGG | + | chr4_4:79594177-79594196 | None:intergenic | 45.0% | |
| AGAGGGTTGAAAGGTAAGAG+AGG | + | chr4_4:79594192-79594211 | None:intergenic | 45.0% | |
| CATTTGATATGTTGTGGCGC+AGG | - | chr4_4:79594339-79594358 | Msa0706580:three_prime_UTR | 45.0% | |
| AATTAAACGCACGGACGTGA+AGG | - | chr4_4:79594548-79594567 | Msa0706580:CDS | 45.0% | |
| TGGCAGGTGGAAATAGTGAT+GGG | - | chr4_4:79595500-79595519 | Msa0706580:intron | 45.0% | |
| AGCTTAAGAGGTGAACCCAA+TGG | - | chr4_4:79595631-79595650 | Msa0706580:intron | 45.0% | |
| TGAACCCAATGGAAGCTCTA+CGG | - | chr4_4:79595642-79595661 | Msa0706580:intron | 45.0% | |
| TTCCATCCTTGTGCCTAATG+TGG | - | chr4_4:79595899-79595918 | Msa0706580:exon | 45.0% | |
| TCCATCCTTGTGCCTAATGT+GGG | - | chr4_4:79595900-79595919 | Msa0706580:exon | 45.0% | |
| CCTGGCTTATGTATGCTCTT+TGG | + | chr4_4:79595946-79595965 | None:intergenic | 45.0% | |
| ! | CCAAAGAGCATACATAAGCC+AGG | - | chr4_4:79595943-79595962 | Msa0706580:five_prime_UTR | 45.0% |
| GAGCATACATAAGCCAGGTA+AGG | - | chr4_4:79595948-79595967 | Msa0706580:five_prime_UTR | 45.0% | |
| !!! | TGTTTTATATATATATTTAT+TGG | - | chr4_4:79595822-79595841 | Msa0706580:intron | 5.0% |
| !!! | TGTTTTATATATATATTTAT+TGG | - | chr4_4:79595822-79595841 | Msa0706580:intron | 5.0% |
| GGGTTGAAAGGTAAGAGAGG+TGG | + | chr4_4:79594189-79594208 | None:intergenic | 50.0% | |
| CTCACTTTCTCCACTGTCTC+AGG | + | chr4_4:79595137-79595156 | None:intergenic | 50.0% | |
| ! | TCTGGGGTAAGCTTGGTTTC+AGG | + | chr4_4:79595191-79595210 | None:intergenic | 50.0% |
| TCAGGTGTCAGCTCAGTGAT+AGG | + | chr4_4:79595353-79595372 | None:intergenic | 50.0% | |
| GTGGCAGGTGGAAATAGTGA+TGG | - | chr4_4:79595499-79595518 | Msa0706580:intron | 50.0% | |
| ACCCACATTAGGCACAAGGA+TGG | + | chr4_4:79595904-79595923 | None:intergenic | 50.0% | |
| ACATAAGCCAGGTAAGGGTG+AGG | - | chr4_4:79595954-79595973 | Msa0706580:five_prime_UTR | 50.0% | |
| TCAGTTACCTCACCCTTACC+TGG | + | chr4_4:79595964-79595983 | None:intergenic | 50.0% | |
| GGGTTGAAAGGTAAGAGAGG+TGG | + | chr4_4:79594189-79594208 | None:intergenic | 50.0% | |
| CTCACTTTCTCCACTGTCTC+AGG | + | chr4_4:79595137-79595156 | None:intergenic | 50.0% | |
| ! | TCTGGGGTAAGCTTGGTTTC+AGG | + | chr4_4:79595191-79595210 | None:intergenic | 50.0% |
| TCAGGTGTCAGCTCAGTGAT+AGG | + | chr4_4:79595353-79595372 | None:intergenic | 50.0% | |
| GTGGCAGGTGGAAATAGTGA+TGG | - | chr4_4:79595499-79595518 | Msa0706580:intron | 50.0% | |
| ACCCACATTAGGCACAAGGA+TGG | + | chr4_4:79595904-79595923 | None:intergenic | 50.0% | |
| ACATAAGCCAGGTAAGGGTG+AGG | - | chr4_4:79595954-79595973 | Msa0706580:five_prime_UTR | 50.0% | |
| TCAGTTACCTCACCCTTACC+TGG | + | chr4_4:79595964-79595983 | None:intergenic | 50.0% | |
| TCAGGCACAACCTGAGACAG+TGG | - | chr4_4:79595124-79595143 | Msa0706580:CDS | 55.0% | |
| TCAGGCACAACCTGAGACAG+TGG | - | chr4_4:79595124-79595143 | Msa0706580:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 79594004 | 79596082 | 79594004 | ID=Msa0706580;Name=Msa0706580 |
| chr4_4 | mRNA | 79594004 | 79596082 | 79594004 | ID=Msa0706580-mRNA-1;Parent=Msa0706580;Name=Msa0706580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|0.5|0.4|5|389|139 |
| chr4_4 | exon | 79594004 | 79594090 | 79594004 | ID=Msa0706580-mRNA-1:exon:25705;Parent=Msa0706580-mRNA-1 |
| chr4_4 | exon | 79594153 | 79594580 | 79594153 | ID=Msa0706580-mRNA-1:exon:25704;Parent=Msa0706580-mRNA-1 |
| chr4_4 | exon | 79594836 | 79594964 | 79594836 | ID=Msa0706580-mRNA-1:exon:25703;Parent=Msa0706580-mRNA-1 |
| chr4_4 | exon | 79595049 | 79595144 | 79595049 | ID=Msa0706580-mRNA-1:exon:25702;Parent=Msa0706580-mRNA-1 |
| chr4_4 | exon | 79595848 | 79596082 | 79595848 | ID=Msa0706580-mRNA-1:exon:25701;Parent=Msa0706580-mRNA-1 |
| chr4_4 | five_prime_UTR | 79595917 | 79596082 | 79595917 | ID=Msa0706580-mRNA-1:five_prime_utr;Parent=Msa0706580-mRNA-1 |
| chr4_4 | CDS | 79595848 | 79595916 | 79595848 | ID=Msa0706580-mRNA-1:cds;Parent=Msa0706580-mRNA-1 |
| chr4_4 | CDS | 79595049 | 79595144 | 79595049 | ID=Msa0706580-mRNA-1:cds;Parent=Msa0706580-mRNA-1 |
| chr4_4 | CDS | 79594836 | 79594964 | 79594836 | ID=Msa0706580-mRNA-1:cds;Parent=Msa0706580-mRNA-1 |
| chr4_4 | CDS | 79594455 | 79594580 | 79594455 | ID=Msa0706580-mRNA-1:cds;Parent=Msa0706580-mRNA-1 |
| chr4_4 | three_prime_UTR | 79594153 | 79594454 | 79594153 | ID=Msa0706580-mRNA-1:three_prime_utr;Parent=Msa0706580-mRNA-1 |
| chr4_4 | three_prime_UTR | 79594004 | 79594090 | 79594004 | ID=Msa0706580-mRNA-1:three_prime_utr;Parent=Msa0706580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
