Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1144980 | CAG27070.1 | 99.083 | 218 | 2 | 0 | 1 | 218 | 1 | 218 | 4.13e-158 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1144980 | sp|Q0WQN4|RAA6B_ARATH | 65.766 | 222 | 64 | 3 | 8 | 217 | 6 | 227 | 3.96e-97 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1144980 | Q6ZXT1 | 99.083 | 218 | 2 | 0 | 1 | 218 | 1 | 218 | 1.97e-158 | 446 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043980 | Msa1144980 | 0.842207 | 2.976853e-58 | -8.615850e-47 |
| Msa0068680 | Msa1144980 | 0.800640 | 1.310785e-48 | -8.615850e-47 |
| Msa0074700 | Msa1144980 | 0.810751 | 9.865918e-51 | -8.615850e-47 |
| Msa0083280 | Msa1144980 | 0.809775 | 1.601286e-50 | -8.615850e-47 |
| Msa0090360 | Msa1144980 | 0.807766 | 4.305504e-50 | -8.615850e-47 |
| Msa0104240 | Msa1144980 | 0.810465 | 1.137004e-50 | -8.615850e-47 |
| Msa0104800 | Msa1144980 | 0.813415 | 2.589695e-51 | -8.615850e-47 |
| Msa0114060 | Msa1144980 | 0.806957 | 6.390178e-50 | -8.615850e-47 |
| Msa0607050 | Msa1144980 | 0.816425 | 5.566869e-52 | -8.615850e-47 |
| Msa0610430 | Msa1144980 | 0.802472 | 5.520408e-49 | -8.615850e-47 |
| Msa0617640 | Msa1144980 | 0.806046 | 9.950534e-50 | -8.615850e-47 |
| Msa0625720 | Msa1144980 | 0.806064 | 9.862121e-50 | -8.615850e-47 |
| Msa0648080 | Msa1144980 | 0.805332 | 1.404900e-49 | -8.615850e-47 |
| Msa0649490 | Msa1144980 | 0.803730 | 3.032872e-49 | -8.615850e-47 |
| Msa0663240 | Msa1144980 | 0.806944 | 6.430132e-50 | -8.615850e-47 |
| Msa0663390 | Msa1144980 | 0.811158 | 8.053790e-51 | -8.615850e-47 |
| Msa0688480 | Msa1144980 | 0.805027 | 1.627203e-49 | -8.615850e-47 |
| Msa0693380 | Msa1144980 | 0.800595 | 1.338713e-48 | -8.615850e-47 |
| Msa0709400 | Msa1144980 | 0.801436 | 9.011814e-49 | -8.615850e-47 |
| Msa0740510 | Msa1144980 | 0.808002 | 3.836605e-50 | -8.615850e-47 |
| Msa0820770 | Msa1144980 | 0.813121 | 3.004779e-51 | -8.615850e-47 |
| Msa0832150 | Msa1144980 | 0.805702 | 1.175214e-49 | -8.615850e-47 |
| Msa0137840 | Msa1144980 | 0.800687 | 1.281954e-48 | -8.615850e-47 |
| Msa0151180 | Msa1144980 | 0.831552 | 1.564601e-55 | -8.615850e-47 |
| Msa0170570 | Msa1144980 | 0.807127 | 5.882304e-50 | -8.615850e-47 |
| Msa0184040 | Msa1144980 | 0.805387 | 1.368190e-49 | -8.615850e-47 |
| Msa0206010 | Msa1144980 | 0.805986 | 1.024221e-49 | -8.615850e-47 |
| Msa0211150 | Msa1144980 | 0.802666 | 5.034567e-49 | -8.615850e-47 |
| Msa0217680 | Msa1144980 | 0.821820 | 3.295189e-53 | -8.615850e-47 |
| Msa0376310 | Msa1144980 | 0.810409 | 1.169432e-50 | -8.615850e-47 |
| Msa0376910 | Msa1144980 | 0.813156 | 2.951397e-51 | -8.615850e-47 |
| Msa0412840 | Msa1144980 | 0.804098 | 2.542450e-49 | -8.615850e-47 |
| Msa0433360 | Msa1144980 | 0.800602 | 1.334630e-48 | -8.615850e-47 |
| Msa0477080 | Msa1144980 | 0.812939 | 3.293527e-51 | -8.615850e-47 |
| Msa0479970 | Msa1144980 | 0.821513 | 3.880546e-53 | -8.615850e-47 |
| Msa0481530 | Msa1144980 | 0.806650 | 7.420325e-50 | -8.615850e-47 |
| Msa0980880 | Msa1144980 | 0.825332 | 4.965652e-54 | -8.615850e-47 |
| Msa1034150 | Msa1144980 | 0.828443 | 8.966188e-55 | -8.615850e-47 |
| Msa1058750 | Msa1144980 | 0.823601 | 1.268517e-53 | -8.615850e-47 |
| Msa1081980 | Msa1144980 | 0.807926 | 3.981160e-50 | -8.615850e-47 |
| Msa1082500 | Msa1144980 | 0.804055 | 2.595437e-49 | -8.615850e-47 |
| Msa0280090 | Msa1144980 | 0.801704 | 7.942900e-49 | -8.615850e-47 |
| Msa0286670 | Msa1144980 | 0.808464 | 3.058348e-50 | -8.615850e-47 |
| Msa0287410 | Msa1144980 | 0.825571 | 4.359158e-54 | -8.615850e-47 |
| Msa0291500 | Msa1144980 | 0.814298 | 1.654703e-51 | -8.615850e-47 |
| Msa0305410 | Msa1144980 | 0.809334 | 1.992043e-50 | -8.615850e-47 |
| Msa0309770 | Msa1144980 | 0.811538 | 6.660245e-51 | -8.615850e-47 |
| Msa0325830 | Msa1144980 | 0.800403 | 1.464791e-48 | -8.615850e-47 |
| Msa0326110 | Msa1144980 | 0.807574 | 4.729324e-50 | -8.615850e-47 |
| Msa0334360 | Msa1144980 | 0.805999 | 1.017497e-49 | -8.615850e-47 |
| Msa0363790 | Msa1144980 | 0.812416 | 4.287397e-51 | -8.615850e-47 |
| Msa1114410 | Msa1144980 | 0.829515 | 4.929761e-55 | -8.615850e-47 |
| Msa1142020 | Msa1144980 | 0.801736 | 7.823333e-49 | -8.615850e-47 |
| Msa1144980 | Msa1147970 | 0.813289 | 2.759686e-51 | -8.615850e-47 |
| Msa1144980 | Msa1154280 | 0.805381 | 1.372088e-49 | -8.615850e-47 |
| Msa1144980 | Msa1159840 | 0.807703 | 4.439652e-50 | -8.615850e-47 |
| Msa1144980 | Msa1167340 | 0.804026 | 2.631229e-49 | -8.615850e-47 |
| Msa1144980 | Msa1174040 | 0.827887 | 1.220228e-54 | -8.615850e-47 |
| Msa1144980 | Msa1181250 | 0.812360 | 4.408321e-51 | -8.615850e-47 |
| Msa1144980 | Msa1181330 | 0.801829 | 7.485379e-49 | -8.615850e-47 |
| Msa1144980 | Msa1228590 | 0.803301 | 3.720590e-49 | -8.615850e-47 |
| Msa1144980 | Msa1253020 | 0.808687 | 2.740564e-50 | -8.615850e-47 |
| Msa1144980 | Msa1294820 | 0.801650 | 8.148044e-49 | -8.615850e-47 |
| Msa1144980 | Msa1296760 | 0.800534 | 1.377809e-48 | -8.615850e-47 |
| Msa1144980 | Msa1305660 | 0.823320 | 1.476146e-53 | -8.615850e-47 |
| Msa1144980 | Msa1306840 | 0.803415 | 3.524472e-49 | -8.615850e-47 |
| Msa1144980 | Msa1327680 | 0.812271 | 4.611369e-51 | -8.615850e-47 |
| Msa1144980 | Msa1331320 | 0.800851 | 1.186966e-48 | -8.615850e-47 |
| Msa1144980 | Msa1353470 | 0.800864 | 1.179863e-48 | -8.615850e-47 |
| Msa1144980 | Msa1353980 | 0.820614 | 6.249192e-53 | -8.615850e-47 |
| Msa1144980 | Msa1356440 | 0.800948 | 1.133988e-48 | -8.615850e-47 |
| Msa1144980 | Msa1377820 | 0.803245 | 3.822300e-49 | -8.615850e-47 |
| Msa1144980 | Msa1394380 | 0.804568 | 2.029903e-49 | -8.615850e-47 |
| Msa1144980 | Msa1397120 | 0.820791 | 5.692423e-53 | -8.615850e-47 |
| Msa1144980 | Msa1403890 | 0.815495 | 8.976278e-52 | -8.615850e-47 |
| Msa1144980 | Msa1411020 | 0.815547 | 8.740631e-52 | -8.615850e-47 |
| Msa1144980 | Msa1420490 | 0.829044 | 6.414008e-55 | -8.615850e-47 |
| Msa1144980 | Msa1423390 | 0.829012 | 6.529531e-55 | -8.615850e-47 |
| Msa1144980 | Msa1424290 | 0.812427 | 4.262627e-51 | -8.615850e-47 |
| Msa1144980 | Msa1424450 | 0.828388 | 9.243938e-55 | -8.615850e-47 |
| Msa1144980 | Msa1432420 | 0.804914 | 1.718716e-49 | -8.615850e-47 |
| Msa1144980 | Msa1433390 | 0.809051 | 2.290418e-50 | -8.615850e-47 |
| Msa1144980 | Msa1434350 | 0.813259 | 2.802052e-51 | -8.615850e-47 |
| Msa1144980 | Msa1439320 | 0.811723 | 6.069312e-51 | -8.615850e-47 |
| Msa1144980 | Msa1440370 | 0.827269 | 1.717203e-54 | -8.615850e-47 |
| Msa1144980 | Msa1440810 | 0.826361 | 2.830542e-54 | -8.615850e-47 |
| Msa1144980 | Msa1444740 | 0.812750 | 3.623659e-51 | -8.615850e-47 |
| Msa1144980 | Msa1452240 | 0.816874 | 4.416781e-52 | -8.615850e-47 |
| Msa1144980 | Msa1457920 | 0.809090 | 2.246328e-50 | -8.615850e-47 |
| Msa1144980 | Msa1460050 | 0.809315 | 2.011019e-50 | -8.615850e-47 |
| Msa1144980 | Msa1462290 | 0.803425 | 3.507705e-49 | -8.615850e-47 |
| Msa1144980 | Msa1463900 | 0.803389 | 3.568191e-49 | -8.615850e-47 |
| Msa1144980 | Msa1466540 | 0.805623 | 1.221037e-49 | -8.615850e-47 |
| Msa0484780 | Msa1144980 | 0.807077 | 6.027019e-50 | -8.615850e-47 |
| Msa0493630 | Msa1144980 | 0.809925 | 1.486801e-50 | -8.615850e-47 |
| Msa0529890 | Msa1144980 | 0.807689 | 4.470330e-50 | -8.615850e-47 |
| Msa0545070 | Msa1144980 | 0.802450 | 5.577721e-49 | -8.615850e-47 |
| Msa0548240 | Msa1144980 | 0.823437 | 1.385522e-53 | -8.615850e-47 |
| Msa0575700 | Msa1144980 | 0.838033 | 3.656741e-57 | -8.615850e-47 |
| Msa0577500 | Msa1144980 | 0.800163 | 1.639604e-48 | -8.615850e-47 |
| Msa0585560 | Msa1144980 | 0.802934 | 4.433219e-49 | -8.615850e-47 |
| Msa0861090 | Msa1144980 | 0.806392 | 8.413364e-50 | -8.615850e-47 |
| Msa0929910 | Msa1144980 | 0.812167 | 4.858432e-51 | -8.615850e-47 |
| Msa0963270 | Msa1144980 | 0.831219 | 1.889883e-55 | -8.615850e-47 |
| Msa0964310 | Msa1144980 | 0.808966 | 2.387998e-50 | -8.615850e-47 |
| Msa0970030 | Msa1144980 | 0.803329 | 3.671798e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1144980 | MtrunA17_Chr8g0392931 | 97.717 | 219 | 3 | 2 | 1 | 218 | 1 | 218 | 6.72e-156 | 430 |
| Msa1144980 | MtrunA17_Chr6g0482721 | 77.251 | 211 | 48 | 0 | 8 | 218 | 5 | 215 | 3.21e-121 | 342 |
| Msa1144980 | MtrunA17_Chr4g0046261 | 58.019 | 212 | 85 | 2 | 9 | 218 | 7 | 216 | 1.22e-84 | 250 |
| Msa1144980 | MtrunA17_Chr2g0283131 | 57.075 | 212 | 87 | 2 | 9 | 218 | 7 | 216 | 6.31e-84 | 248 |
| Msa1144980 | MtrunA17_Chr4g0040781 | 57.075 | 212 | 87 | 2 | 9 | 218 | 7 | 216 | 7.43e-84 | 248 |
| Msa1144980 | MtrunA17_Chr2g0325091 | 56.398 | 211 | 89 | 2 | 9 | 218 | 5 | 213 | 2.59e-82 | 244 |
| Msa1144980 | MtrunA17_Chr2g0315551 | 55.714 | 210 | 93 | 0 | 9 | 218 | 7 | 216 | 5.71e-81 | 241 |
| Msa1144980 | MtrunA17_Chr3g0112681 | 53.810 | 210 | 97 | 0 | 9 | 218 | 6 | 215 | 1.27e-79 | 237 |
| Msa1144980 | MtrunA17_Chr2g0276941 | 54.460 | 213 | 96 | 1 | 7 | 218 | 7 | 219 | 1.65e-79 | 237 |
| Msa1144980 | MtrunA17_Chr4g0032201 | 54.286 | 210 | 95 | 1 | 9 | 218 | 6 | 214 | 6.83e-79 | 235 |
| Msa1144980 | MtrunA17_Chr3g0123821 | 53.271 | 214 | 93 | 3 | 9 | 217 | 10 | 221 | 5.10e-77 | 231 |
| Msa1144980 | MtrunA17_Chr2g0319951 | 53.555 | 211 | 97 | 1 | 9 | 218 | 7 | 217 | 2.43e-76 | 229 |
| Msa1144980 | MtrunA17_Chr8g0381841 | 53.704 | 216 | 90 | 4 | 9 | 217 | 11 | 223 | 4.19e-75 | 226 |
| Msa1144980 | MtrunA17_Chr7g0231131 | 50.000 | 212 | 104 | 1 | 8 | 217 | 8 | 219 | 1.43e-73 | 222 |
| Msa1144980 | MtrunA17_Chr7g0275991 | 51.174 | 213 | 100 | 1 | 10 | 218 | 15 | 227 | 7.22e-73 | 220 |
| Msa1144980 | MtrunA17_Chr1g0174281 | 47.907 | 215 | 107 | 2 | 8 | 217 | 8 | 222 | 4.01e-72 | 218 |
| Msa1144980 | MtrunA17_Chr1g0189361 | 53.052 | 213 | 92 | 3 | 13 | 218 | 12 | 223 | 4.10e-72 | 218 |
| Msa1144980 | MtrunA17_Chr7g0214241 | 52.153 | 209 | 94 | 2 | 14 | 218 | 14 | 220 | 7.16e-71 | 215 |
| Msa1144980 | MtrunA17_Chr8g0346421 | 48.214 | 224 | 104 | 3 | 3 | 218 | 12 | 231 | 5.03e-69 | 211 |
| Msa1144980 | MtrunA17_Chr7g0234201 | 52.113 | 213 | 85 | 3 | 14 | 218 | 12 | 215 | 4.05e-67 | 205 |
| Msa1144980 | MtrunA17_Chr8g0351861 | 47.345 | 226 | 105 | 4 | 1 | 218 | 8 | 227 | 5.75e-66 | 203 |
| Msa1144980 | MtrunA17_Chr7g0250531 | 46.919 | 211 | 102 | 2 | 8 | 218 | 1 | 201 | 5.83e-59 | 184 |
| Msa1144980 | MtrunA17_Chr4g0055651 | 47.170 | 212 | 100 | 4 | 8 | 218 | 1 | 201 | 7.48e-57 | 179 |
| Msa1144980 | MtrunA17_Chr2g0290891 | 50.847 | 177 | 79 | 1 | 14 | 182 | 5 | 181 | 4.72e-56 | 177 |
| Msa1144980 | MtrunA17_Chr6g0458081 | 44.712 | 208 | 113 | 1 | 13 | 218 | 4 | 211 | 6.76e-56 | 177 |
| Msa1144980 | MtrunA17_Chr2g0276931 | 51.807 | 166 | 80 | 0 | 11 | 176 | 5 | 170 | 2.30e-54 | 172 |
| Msa1144980 | MtrunA17_Chr8g0349711 | 48.603 | 179 | 91 | 1 | 14 | 192 | 5 | 182 | 1.01e-53 | 171 |
| Msa1144980 | MtrunA17_Chr8g0335471 | 45.755 | 212 | 104 | 3 | 8 | 218 | 1 | 202 | 1.72e-53 | 170 |
| Msa1144980 | MtrunA17_Chr1g0212521 | 43.204 | 206 | 112 | 2 | 13 | 217 | 13 | 214 | 1.53e-51 | 166 |
| Msa1144980 | MtrunA17_Chr1g0182321 | 43.689 | 206 | 111 | 2 | 13 | 217 | 13 | 214 | 1.59e-51 | 166 |
| Msa1144980 | MtrunA17_Chr8g0349681 | 51.829 | 164 | 79 | 0 | 14 | 177 | 383 | 546 | 2.54e-51 | 174 |
| Msa1144980 | MtrunA17_Chr8g0349681 | 44.693 | 179 | 98 | 1 | 14 | 192 | 174 | 351 | 7.61e-47 | 162 |
| Msa1144980 | MtrunA17_Chr8g0349681 | 48.428 | 159 | 82 | 0 | 14 | 172 | 12 | 170 | 3.51e-45 | 158 |
| Msa1144980 | MtrunA17_Chr1g0182301 | 43.204 | 206 | 112 | 2 | 13 | 217 | 13 | 214 | 4.56e-51 | 164 |
| Msa1144980 | MtrunA17_Chr4g0030911 | 44.175 | 206 | 109 | 3 | 13 | 217 | 13 | 213 | 3.38e-50 | 162 |
| Msa1144980 | MtrunA17_Chr7g0263071 | 44.175 | 206 | 110 | 2 | 13 | 217 | 13 | 214 | 3.58e-50 | 162 |
| Msa1144980 | MtrunA17_Chr2g0327911 | 41.232 | 211 | 115 | 5 | 9 | 217 | 9 | 212 | 1.42e-46 | 153 |
| Msa1144980 | MtrunA17_Chr8g0384311 | 45.614 | 171 | 90 | 3 | 10 | 178 | 8 | 177 | 1.60e-45 | 150 |
| Msa1144980 | MtrunA17_Chr1g0159481 | 47.059 | 170 | 87 | 3 | 11 | 178 | 13 | 181 | 2.14e-45 | 150 |
| Msa1144980 | MtrunA17_Chr3g0109721 | 39.604 | 202 | 109 | 2 | 17 | 218 | 12 | 200 | 1.21e-44 | 147 |
| Msa1144980 | MtrunA17_Chr5g0433561 | 38.614 | 202 | 111 | 2 | 17 | 218 | 12 | 200 | 2.10e-43 | 144 |
| Msa1144980 | MtrunA17_Chr3g0130271 | 44.767 | 172 | 91 | 4 | 10 | 178 | 7 | 177 | 5.28e-42 | 141 |
| Msa1144980 | MtrunA17_Chr1g0197331 | 42.473 | 186 | 104 | 3 | 1 | 183 | 1 | 186 | 5.77e-41 | 139 |
| Msa1144980 | MtrunA17_Chr3g0123971 | 36.364 | 176 | 109 | 1 | 16 | 191 | 10 | 182 | 1.45e-40 | 137 |
| Msa1144980 | MtrunA17_Chr8g0382221 | 35.912 | 181 | 115 | 1 | 16 | 196 | 10 | 189 | 2.04e-40 | 137 |
| Msa1144980 | MtrunA17_Chr1g0199331 | 45.455 | 154 | 83 | 1 | 17 | 169 | 33 | 186 | 2.74e-40 | 136 |
| Msa1144980 | MtrunA17_Chr7g0265001 | 41.346 | 208 | 113 | 4 | 13 | 218 | 14 | 214 | 2.76e-40 | 137 |
| Msa1144980 | MtrunA17_Chr4g0055081 | 37.662 | 154 | 96 | 0 | 16 | 169 | 10 | 163 | 4.85e-38 | 131 |
| Msa1144980 | MtrunA17_Chr5g0400131 | 37.662 | 154 | 96 | 0 | 16 | 169 | 10 | 163 | 7.11e-38 | 130 |
| Msa1144980 | MtrunA17_Chr1g0180291 | 43.275 | 171 | 94 | 3 | 13 | 181 | 12 | 181 | 2.95e-37 | 129 |
| Msa1144980 | MtrunA17_Chr6g0466301 | 36.022 | 186 | 110 | 4 | 15 | 193 | 8 | 191 | 2.24e-36 | 127 |
| Msa1144980 | MtrunA17_Chr6g0465491 | 36.022 | 186 | 110 | 4 | 15 | 193 | 8 | 191 | 2.24e-36 | 127 |
| Msa1144980 | MtrunA17_Chr8g0390561 | 35.838 | 173 | 111 | 0 | 17 | 189 | 11 | 183 | 8.05e-36 | 125 |
| Msa1144980 | MtrunA17_Chr4g0034871 | 37.037 | 162 | 95 | 3 | 15 | 169 | 8 | 169 | 1.37e-34 | 122 |
| Msa1144980 | MtrunA17_Chr1g0201121 | 35.484 | 186 | 111 | 4 | 15 | 193 | 8 | 191 | 1.87e-34 | 122 |
| Msa1144980 | MtrunA17_Chr2g0331691 | 38.272 | 162 | 93 | 3 | 15 | 169 | 10 | 171 | 3.74e-34 | 121 |
| Msa1144980 | MtrunA17_Chr8g0383261 | 37.423 | 163 | 95 | 4 | 15 | 170 | 12 | 174 | 3.27e-33 | 119 |
| Msa1144980 | MtrunA17_Chr4g0004661 | 37.654 | 162 | 94 | 3 | 15 | 169 | 64 | 225 | 3.94e-33 | 120 |
| Msa1144980 | MtrunA17_Chr6g0466161 | 33.696 | 184 | 112 | 5 | 30 | 205 | 5 | 186 | 2.59e-26 | 100 |
| Msa1144980 | MtrunA17_Chr6g0465471 | 35.404 | 161 | 95 | 4 | 30 | 183 | 5 | 163 | 1.09e-25 | 99.4 |
| Msa1144980 | MtrunA17_Chr3g0138101 | 29.703 | 202 | 135 | 5 | 16 | 214 | 14 | 211 | 1.12e-23 | 94.4 |
| Msa1144980 | MtrunA17_Chr3g0138121 | 33.758 | 157 | 101 | 3 | 16 | 172 | 14 | 167 | 1.54e-23 | 94.0 |
| Msa1144980 | MtrunA17_Chr3g0138111 | 33.758 | 157 | 101 | 3 | 16 | 172 | 14 | 167 | 1.73e-23 | 94.0 |
| Msa1144980 | MtrunA17_Chr2g0325101 | 31.737 | 167 | 100 | 5 | 15 | 169 | 6 | 170 | 5.44e-21 | 86.7 |
| Msa1144980 | MtrunA17_Chr4g0037021 | 30.387 | 181 | 112 | 5 | 15 | 183 | 6 | 184 | 9.74e-20 | 83.2 |
| Msa1144980 | MtrunA17_Chr6g0486041 | 31.016 | 187 | 113 | 6 | 15 | 188 | 6 | 189 | 9.78e-20 | 83.6 |
| Msa1144980 | MtrunA17_Chr5g0405791 | 30.539 | 167 | 102 | 5 | 15 | 169 | 6 | 170 | 2.57e-19 | 82.0 |
| Msa1144980 | MtrunA17_Chr8g0371501 | 31.138 | 167 | 101 | 5 | 15 | 169 | 6 | 170 | 3.04e-19 | 82.0 |
| Msa1144980 | MtrunA17_Chr4g0046211 | 33.065 | 124 | 80 | 3 | 15 | 137 | 6 | 127 | 4.88e-18 | 77.4 |
| Msa1144980 | MtrunA17_Chr3g0117931 | 32.335 | 167 | 99 | 5 | 15 | 169 | 8 | 172 | 9.56e-18 | 78.2 |
| Msa1144980 | MtrunA17_Chr6g0466431 | 35.644 | 101 | 56 | 1 | 15 | 115 | 8 | 99 | 1.35e-16 | 72.4 |
| Msa1144980 | MtrunA17_Chr6g0465611 | 35.644 | 101 | 56 | 1 | 15 | 115 | 8 | 99 | 1.35e-16 | 72.4 |
| Msa1144980 | MtrunA17_Chr1g0178291 | 36.000 | 150 | 89 | 4 | 20 | 169 | 433 | 575 | 1.24e-15 | 75.1 |
| Msa1144980 | MtrunA17_Chr2g0331841 | 46.552 | 58 | 31 | 0 | 84 | 141 | 2 | 59 | 1.25e-12 | 61.6 |
| Msa1144980 | MtrunA17_Chr5g0443631 | 24.194 | 186 | 135 | 2 | 16 | 196 | 105 | 289 | 1.11e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1144980 | AT1G18200.1 | 65.766 | 222 | 64 | 3 | 8 | 217 | 6 | 227 | 4.03e-98 | 285 |
| Msa1144980 | AT1G73640.1 | 64.159 | 226 | 65 | 4 | 8 | 217 | 6 | 231 | 3.47e-96 | 280 |
| Msa1144980 | AT5G60860.1 | 57.075 | 212 | 87 | 2 | 9 | 218 | 7 | 216 | 2.10e-84 | 249 |
| Msa1144980 | AT4G18430.1 | 58.019 | 212 | 85 | 2 | 9 | 218 | 7 | 216 | 2.95e-84 | 249 |
| Msa1144980 | AT5G45750.1 | 59.048 | 210 | 85 | 1 | 9 | 218 | 7 | 215 | 5.56e-84 | 248 |
| Msa1144980 | AT1G09630.1 | 54.762 | 210 | 95 | 0 | 9 | 218 | 6 | 215 | 3.27e-83 | 246 |
| Msa1144980 | AT1G16920.1 | 57.143 | 210 | 89 | 1 | 9 | 218 | 7 | 215 | 9.74e-83 | 245 |
| Msa1144980 | AT4G18800.1 | 57.619 | 210 | 86 | 2 | 9 | 218 | 7 | 213 | 2.63e-82 | 244 |
| Msa1144980 | AT2G33870.1 | 55.660 | 212 | 91 | 2 | 9 | 218 | 7 | 217 | 1.34e-81 | 243 |
| Msa1144980 | AT3G15060.1 | 56.132 | 212 | 89 | 2 | 9 | 218 | 7 | 216 | 1.63e-81 | 242 |
| Msa1144980 | AT1G06400.1 | 57.143 | 210 | 89 | 1 | 9 | 218 | 7 | 215 | 3.91e-81 | 241 |
| Msa1144980 | AT1G28550.1 | 54.717 | 212 | 93 | 2 | 9 | 218 | 7 | 217 | 6.63e-80 | 238 |
| Msa1144980 | AT1G07410.1 | 55.189 | 212 | 91 | 3 | 8 | 218 | 5 | 213 | 1.80e-78 | 234 |
| Msa1144980 | AT5G65270.1 | 53.953 | 215 | 92 | 3 | 10 | 218 | 12 | 225 | 5.24e-77 | 231 |
| Msa1144980 | AT3G12160.1 | 52.358 | 212 | 99 | 1 | 8 | 217 | 8 | 219 | 8.95e-77 | 230 |
| Msa1144980 | AT4G39990.1 | 54.028 | 211 | 93 | 2 | 11 | 218 | 13 | 222 | 1.46e-76 | 230 |
| Msa1144980 | AT5G47520.1 | 54.930 | 213 | 93 | 2 | 9 | 218 | 8 | 220 | 5.42e-76 | 228 |
| Msa1144980 | AT5G47960.1 | 53.521 | 213 | 96 | 1 | 8 | 217 | 8 | 220 | 1.56e-75 | 227 |
| Msa1144980 | AT3G46830.1 | 53.555 | 211 | 97 | 1 | 9 | 218 | 6 | 216 | 2.37e-73 | 221 |
| Msa1144980 | AT3G46830.2 | 53.555 | 211 | 97 | 1 | 9 | 218 | 6 | 216 | 2.37e-73 | 221 |
| Msa1144980 | AT2G31680.1 | 52.632 | 209 | 95 | 2 | 13 | 218 | 10 | 217 | 4.77e-72 | 218 |
| Msa1144980 | AT5G59150.1 | 52.358 | 212 | 98 | 2 | 9 | 218 | 6 | 216 | 6.47e-72 | 218 |
| Msa1144980 | AT1G05810.1 | 53.081 | 211 | 90 | 3 | 13 | 218 | 10 | 216 | 6.83e-71 | 215 |
| Msa1144980 | AT1G05810.2 | 53.081 | 211 | 90 | 3 | 13 | 218 | 56 | 262 | 1.42e-70 | 216 |
| Msa1144980 | AT2G43130.1 | 51.942 | 206 | 97 | 1 | 13 | 218 | 10 | 213 | 1.09e-68 | 209 |
| Msa1144980 | AT3G07410.1 | 52.174 | 207 | 98 | 1 | 13 | 218 | 10 | 216 | 1.32e-67 | 207 |
| Msa1144980 | AT1G01200.1 | 48.165 | 218 | 100 | 4 | 10 | 218 | 23 | 236 | 2.67e-64 | 199 |
| Msa1144980 | AT4G35860.1 | 44.231 | 208 | 114 | 1 | 13 | 218 | 4 | 211 | 2.01e-56 | 178 |
| Msa1144980 | AT4G17170.1 | 50.847 | 177 | 79 | 1 | 14 | 182 | 5 | 181 | 3.32e-56 | 178 |
| Msa1144980 | AT1G02130.1 | 46.226 | 212 | 103 | 3 | 8 | 218 | 1 | 202 | 1.02e-55 | 176 |
| Msa1144980 | AT4G17530.1 | 45.024 | 211 | 106 | 2 | 8 | 218 | 1 | 201 | 2.06e-55 | 176 |
| Msa1144980 | AT4G17160.1 | 48.876 | 178 | 87 | 1 | 14 | 191 | 5 | 178 | 6.99e-54 | 172 |
| Msa1144980 | AT5G47200.1 | 44.076 | 211 | 108 | 2 | 8 | 218 | 1 | 201 | 2.35e-53 | 170 |
| Msa1144980 | AT5G59840.1 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 1.04e-52 | 169 |
| Msa1144980 | AT3G53610.2 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 1.24e-52 | 169 |
| Msa1144980 | AT3G53610.3 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 1.24e-52 | 169 |
| Msa1144980 | AT3G53610.1 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 1.24e-52 | 169 |
| Msa1144980 | AT3G46060.2 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 9.22e-52 | 167 |
| Msa1144980 | AT3G46060.3 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 9.22e-52 | 167 |
| Msa1144980 | AT3G46060.1 | 44.660 | 206 | 109 | 2 | 13 | 217 | 13 | 214 | 9.22e-52 | 167 |
| Msa1144980 | AT5G03520.1 | 45.894 | 207 | 106 | 3 | 13 | 218 | 13 | 214 | 1.11e-50 | 164 |
| Msa1144980 | AT3G11730.1 | 51.852 | 162 | 78 | 0 | 11 | 172 | 4 | 165 | 2.14e-50 | 163 |
| Msa1144980 | AT3G09900.1 | 44.231 | 208 | 110 | 3 | 13 | 218 | 13 | 216 | 1.03e-49 | 161 |
| Msa1144980 | AT5G59150.2 | 48.171 | 164 | 82 | 2 | 57 | 218 | 3 | 165 | 1.80e-46 | 151 |
| Msa1144980 | AT4G19640.1 | 44.872 | 156 | 86 | 0 | 17 | 172 | 12 | 167 | 4.75e-45 | 149 |
| Msa1144980 | AT1G43890.3 | 46.471 | 170 | 88 | 3 | 11 | 178 | 9 | 177 | 1.55e-44 | 148 |
| Msa1144980 | AT1G43890.1 | 46.471 | 170 | 88 | 3 | 11 | 178 | 9 | 177 | 1.55e-44 | 148 |
| Msa1144980 | AT1G43890.2 | 46.471 | 170 | 88 | 3 | 11 | 178 | 9 | 177 | 1.55e-44 | 148 |
| Msa1144980 | AT5G45130.1 | 45.513 | 156 | 85 | 0 | 17 | 172 | 12 | 167 | 3.23e-44 | 147 |
| Msa1144980 | AT5G45130.2 | 45.455 | 154 | 84 | 0 | 19 | 172 | 22 | 175 | 1.99e-43 | 145 |
| Msa1144980 | AT3G54840.2 | 46.753 | 154 | 81 | 1 | 17 | 169 | 35 | 188 | 9.09e-42 | 140 |
| Msa1144980 | AT3G54840.1 | 46.753 | 154 | 81 | 1 | 17 | 169 | 35 | 188 | 1.48e-41 | 140 |
| Msa1144980 | AT3G54840.3 | 46.711 | 152 | 80 | 1 | 19 | 169 | 3 | 154 | 1.52e-41 | 139 |
| Msa1144980 | AT4G39890.1 | 36.723 | 177 | 110 | 2 | 16 | 191 | 10 | 185 | 1.37e-40 | 138 |
| Msa1144980 | AT5G03530.2 | 41.827 | 208 | 111 | 5 | 13 | 218 | 11 | 210 | 2.55e-40 | 137 |
| Msa1144980 | AT5G03530.1 | 41.827 | 208 | 111 | 5 | 13 | 218 | 11 | 210 | 2.55e-40 | 137 |
| Msa1144980 | AT4G35860.2 | 41.718 | 163 | 93 | 1 | 57 | 217 | 2 | 164 | 4.17e-40 | 135 |
| Msa1144980 | AT2G44610.1 | 34.483 | 203 | 128 | 2 | 16 | 218 | 10 | 207 | 3.11e-39 | 134 |
| Msa1144980 | AT5G10260.1 | 37.580 | 157 | 98 | 0 | 16 | 172 | 10 | 166 | 5.13e-39 | 134 |
| Msa1144980 | AT2G22290.1 | 37.580 | 157 | 98 | 0 | 16 | 172 | 10 | 166 | 7.66e-38 | 130 |
| Msa1144980 | AT5G03520.2 | 42.353 | 170 | 92 | 3 | 50 | 218 | 40 | 204 | 2.05e-37 | 129 |
| Msa1144980 | AT5G64990.1 | 32.836 | 201 | 131 | 2 | 16 | 216 | 8 | 204 | 1.35e-36 | 127 |
| Msa1144980 | AT4G19640.3 | 45.038 | 131 | 72 | 0 | 17 | 147 | 12 | 142 | 1.91e-36 | 127 |
| Msa1144980 | AT4G19640.2 | 45.238 | 126 | 69 | 0 | 17 | 142 | 12 | 137 | 1.26e-35 | 123 |
| Msa1144980 | AT1G22740.1 | 37.989 | 179 | 102 | 4 | 15 | 186 | 8 | 184 | 4.88e-35 | 123 |
| Msa1144980 | AT3G18820.1 | 38.272 | 162 | 93 | 3 | 15 | 169 | 8 | 169 | 1.82e-34 | 122 |
| Msa1144980 | AT1G49300.2 | 37.126 | 167 | 98 | 3 | 15 | 174 | 8 | 174 | 4.88e-34 | 121 |
| Msa1144980 | AT1G49300.1 | 37.126 | 167 | 98 | 3 | 15 | 174 | 8 | 174 | 4.88e-34 | 121 |
| Msa1144980 | AT5G64990.2 | 31.731 | 208 | 131 | 3 | 16 | 216 | 8 | 211 | 8.81e-34 | 120 |
| Msa1144980 | AT4G09720.1 | 34.896 | 192 | 112 | 4 | 15 | 193 | 8 | 199 | 2.10e-33 | 119 |
| Msa1144980 | AT1G52280.1 | 36.420 | 162 | 96 | 3 | 15 | 169 | 8 | 169 | 4.40e-33 | 118 |
| Msa1144980 | AT3G09910.3 | 42.105 | 171 | 96 | 3 | 13 | 181 | 11 | 180 | 5.37e-33 | 118 |
| Msa1144980 | AT3G09910.1 | 42.105 | 171 | 96 | 3 | 13 | 181 | 11 | 180 | 5.37e-33 | 118 |
| Msa1144980 | AT3G09910.2 | 42.105 | 171 | 96 | 3 | 13 | 181 | 11 | 180 | 5.37e-33 | 118 |
| Msa1144980 | AT2G21880.1 | 36.364 | 165 | 98 | 4 | 15 | 172 | 9 | 173 | 2.95e-32 | 116 |
| Msa1144980 | AT3G09910.5 | 43.827 | 162 | 88 | 3 | 13 | 172 | 11 | 171 | 3.27e-32 | 116 |
| Msa1144980 | AT3G09910.4 | 43.827 | 162 | 88 | 3 | 13 | 172 | 11 | 171 | 3.27e-32 | 116 |
| Msa1144980 | AT4G09720.4 | 34.518 | 197 | 111 | 5 | 15 | 193 | 8 | 204 | 3.30e-32 | 116 |
| Msa1144980 | AT4G09720.3 | 33.005 | 203 | 112 | 4 | 15 | 193 | 8 | 210 | 6.09e-32 | 116 |
| Msa1144980 | AT3G16100.1 | 36.420 | 162 | 96 | 3 | 15 | 169 | 8 | 169 | 6.28e-32 | 115 |
| Msa1144980 | AT5G39620.1 | 35.955 | 178 | 105 | 4 | 16 | 186 | 6 | 181 | 5.18e-31 | 113 |
| Msa1144980 | AT5G46025.1 | 47.664 | 107 | 54 | 2 | 77 | 181 | 6 | 112 | 6.45e-27 | 100 |
| Msa1144980 | AT5G55080.1 | 32.298 | 161 | 106 | 3 | 16 | 176 | 14 | 171 | 2.93e-26 | 101 |
| Msa1144980 | AT2G21880.4 | 33.784 | 148 | 91 | 4 | 32 | 172 | 1 | 148 | 6.47e-24 | 94.4 |
| Msa1144980 | AT2G21880.3 | 33.784 | 148 | 91 | 4 | 32 | 172 | 1 | 148 | 6.47e-24 | 94.4 |
| Msa1144980 | AT5G20010.1 | 31.771 | 192 | 123 | 4 | 16 | 207 | 14 | 197 | 1.11e-23 | 94.7 |
| Msa1144980 | AT4G09720.6 | 34.568 | 162 | 93 | 4 | 45 | 193 | 4 | 165 | 1.68e-23 | 92.8 |
| Msa1144980 | AT4G09720.5 | 34.568 | 162 | 93 | 4 | 45 | 193 | 4 | 165 | 1.68e-23 | 92.8 |
| Msa1144980 | AT4G09720.2 | 34.568 | 162 | 93 | 4 | 45 | 193 | 4 | 165 | 1.68e-23 | 92.8 |
| Msa1144980 | AT5G20020.1 | 33.758 | 157 | 101 | 3 | 16 | 172 | 14 | 167 | 2.00e-23 | 94.0 |
| Msa1144980 | AT5G55190.1 | 33.758 | 157 | 101 | 3 | 16 | 172 | 14 | 167 | 2.46e-23 | 93.6 |
| Msa1144980 | AT2G21880.2 | 31.515 | 165 | 98 | 5 | 15 | 172 | 9 | 165 | 1.75e-22 | 91.3 |
| Msa1144980 | AT4G35020.1 | 32.571 | 175 | 104 | 5 | 15 | 177 | 6 | 178 | 2.00e-20 | 85.5 |
| Msa1144980 | AT4G35020.2 | 32.571 | 175 | 104 | 5 | 15 | 177 | 6 | 178 | 2.00e-20 | 85.5 |
| Msa1144980 | AT4G35020.3 | 32.571 | 175 | 104 | 5 | 15 | 177 | 6 | 178 | 2.00e-20 | 85.5 |
| Msa1144980 | AT2G44690.1 | 30.286 | 175 | 108 | 4 | 15 | 177 | 18 | 190 | 1.95e-19 | 83.2 |
| Msa1144980 | AT4G28950.1 | 27.624 | 181 | 119 | 4 | 15 | 185 | 6 | 184 | 1.44e-18 | 80.9 |
| Msa1144980 | AT3G51300.1 | 30.303 | 165 | 101 | 5 | 17 | 169 | 8 | 170 | 2.72e-18 | 79.7 |
| Msa1144980 | AT2G17800.2 | 29.940 | 167 | 103 | 5 | 15 | 169 | 6 | 170 | 3.91e-18 | 79.3 |
| Msa1144980 | AT2G17800.1 | 29.940 | 167 | 103 | 5 | 15 | 169 | 6 | 170 | 3.91e-18 | 79.3 |
| Msa1144980 | AT4G35950.1 | 30.769 | 169 | 99 | 5 | 15 | 169 | 6 | 170 | 4.12e-18 | 79.3 |
| Msa1144980 | AT5G45970.1 | 29.940 | 167 | 103 | 5 | 15 | 169 | 6 | 170 | 5.27e-18 | 79.3 |
| Msa1144980 | AT1G75840.1 | 29.940 | 167 | 103 | 5 | 15 | 169 | 6 | 170 | 5.70e-18 | 79.0 |
| Msa1144980 | AT1G20090.1 | 28.571 | 175 | 111 | 5 | 15 | 177 | 5 | 177 | 7.79e-18 | 78.6 |
| Msa1144980 | AT3G48040.2 | 35.484 | 124 | 77 | 3 | 15 | 137 | 8 | 129 | 1.39e-17 | 77.4 |
| Msa1144980 | AT3G48040.1 | 35.484 | 124 | 77 | 3 | 15 | 137 | 8 | 129 | 1.70e-17 | 77.8 |
| Msa1144980 | AT5G62880.2 | 34.677 | 124 | 78 | 3 | 15 | 137 | 8 | 129 | 5.70e-17 | 76.3 |
| Msa1144980 | AT5G62880.1 | 30.539 | 167 | 102 | 5 | 15 | 169 | 8 | 172 | 6.61e-17 | 76.6 |
| Msa1144980 | AT4G35020.4 | 37.719 | 114 | 68 | 3 | 17 | 129 | 8 | 119 | 4.33e-16 | 72.8 |
| Msa1144980 | AT4G35020.5 | 37.719 | 114 | 68 | 3 | 17 | 129 | 8 | 119 | 4.33e-16 | 72.8 |
Find 63 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGTGTCTCATCCATTT+TGG | 0.207851 | 7_4:+21468905 | None:intergenic |
| AACTCATCAAAGCTCAAATA+TGG | 0.208455 | 7_4:-21470956 | Msa1144980:CDS |
| TTCCAAAGAGAAGGTTATTC+TGG | 0.244361 | 7_4:+21471210 | None:intergenic |
| TTCCCGTTAGATAGATTAAT+TGG | 0.245574 | 7_4:+21468888 | None:intergenic |
| GGAAGGGAAGTTACCTTTCT+TGG | 0.267002 | 7_4:+21470922 | None:intergenic |
| AAGAAAGATATATATATTAA+TGG | 0.275635 | 7_4:-21471159 | Msa1144980:exon |
| TCATGATCGATGAGAGGTTT+TGG | 0.313341 | 7_4:-21468813 | Msa1144980:exon |
| GGTTTGCAAAAGATGAATTC+AGG | 0.331846 | 7_4:-21471040 | Msa1144980:CDS |
| GAGAAGTTTGGATGCCAAAA+TGG | 0.334979 | 7_4:-21468919 | Msa1144980:CDS |
| GTCCAGAATAACCTTCTCTT+TGG | 0.334985 | 7_4:-21471212 | Msa1144980:five_prime_UTR |
| GCAGTGCTGATTGGTGATTC+TGG | 0.349436 | 7_4:-21471089 | Msa1144980:CDS |
| GGAAATCAAATCTGCTTTCA+AGG | 0.357132 | 7_4:-21471061 | Msa1144980:CDS |
| CATCACAAACCAGAGAAGTT+TGG | 0.359508 | 7_4:-21468931 | Msa1144980:CDS |
| TCCCACTTGTTCATTCATTA+CGG | 0.361929 | 7_4:-21468764 | Msa1144980:three_prime_UTR |
| AAGGGATCACTTATATCAAA+TGG | 0.363707 | 7_4:+21468681 | None:intergenic |
| TGAAGTTACCGCAACTAAAC+AGG | 0.414506 | 7_4:-21468847 | Msa1144980:CDS |
| GAGATGGTAGTTATTCTAGT+TGG | 0.421619 | 7_4:-21469107 | Msa1144980:CDS |
| TTCGTATTATAGAGGAGCCT+TGG | 0.423636 | 7_4:-21469219 | Msa1144980:CDS |
| GCAAATTCAACTCCTATAGT+TGG | 0.428034 | 7_4:+21471005 | None:intergenic |
| TTAGTGGAGCTACGAGAGTT+TGG | 0.450057 | 7_4:-21469137 | Msa1144980:CDS |
| CACCAATTAATCTATCTAAC+GGG | 0.454761 | 7_4:-21468890 | Msa1144980:CDS |
| TTGGATTCAAAGCCAACTAT+AGG | 0.457514 | 7_4:-21471017 | Msa1144980:CDS |
| AGAGTGTGATTACTTGTTCA+AGG | 0.462038 | 7_4:-21471111 | Msa1144980:CDS |
| GAGTGTAGGCAGATGGTTAG+TGG | 0.473378 | 7_4:-21469153 | Msa1144980:CDS |
| CTGATTGGTGATTCTGGAGT+TGG | 0.474745 | 7_4:-21471083 | Msa1144980:CDS |
| TTGAGGAAGAAGAAGCGAAA+GGG | 0.477892 | 7_4:-21469052 | Msa1144980:CDS |
| ATTGGTAATTCGTTATGAAA+CGG | 0.481750 | 7_4:-21468729 | Msa1144980:three_prime_UTR |
| GTTGGAAACAAATGTGATCT+TGG | 0.485814 | 7_4:-21469089 | Msa1144980:CDS |
| TCGTATTATAGAGGAGCCTT+GGG | 0.495142 | 7_4:-21469218 | Msa1144980:CDS |
| ATCACAAGTTCGTATTATAG+AGG | 0.496020 | 7_4:-21469227 | Msa1144980:CDS |
| ACTCATCAAAGCTCAAATAT+GGG | 0.497816 | 7_4:-21470955 | Msa1144980:CDS |
| GGTACAAAATCATCATGGTC+AGG | 0.506784 | 7_4:+21468703 | None:intergenic |
| ATCCCTTGATGTTGCTAGCT+AGG | 0.510337 | 7_4:-21468665 | Msa1144980:three_prime_UTR |
| AAAGGGTTTGCAGAGGCAGA+AGG | 0.511447 | 7_4:-21469035 | Msa1144980:CDS |
| TACAATAAGTTCCAAAGAGA+AGG | 0.512569 | 7_4:+21471201 | None:intergenic |
| CATCCTAGCTAGCAACATCA+AGG | 0.517895 | 7_4:+21468662 | None:intergenic |
| TGATTGGTGATTCTGGAGTT+GGG | 0.520899 | 7_4:-21471082 | Msa1144980:CDS |
| AGGGATCACTTATATCAAAT+GGG | 0.525694 | 7_4:+21468682 | None:intergenic |
| GGGACACTGCCGGCCAAGAA+AGG | 0.528856 | 7_4:-21470935 | Msa1144980:intron |
| TTGTTCAAGGCAGTGCTGAT+TGG | 0.534857 | 7_4:-21471098 | Msa1144980:CDS |
| TGCAAAAGATGAATTCAGGT+TGG | 0.536108 | 7_4:-21471036 | Msa1144980:CDS |
| GGGAAGTTACCTTTCTTGGC+CGG | 0.553345 | 7_4:+21470926 | None:intergenic |
| ACACCAATTAATCTATCTAA+CGG | 0.555332 | 7_4:-21468891 | Msa1144980:CDS |
| ATACACTAGCAATGCTCCCA+AGG | 0.558289 | 7_4:+21469202 | None:intergenic |
| GTGGAGCTACGAGAGTTTGG+TGG | 0.563302 | 7_4:-21469134 | Msa1144980:CDS |
| TGGTGAATCAAGAGAAGTTG+AGG | 0.568427 | 7_4:-21469069 | Msa1144980:CDS |
| AACCGTAATGAATGAACAAG+TGG | 0.573201 | 7_4:+21468762 | None:intergenic |
| ATTTGCATACAGAAACATCA+AGG | 0.574857 | 7_4:-21470988 | Msa1144980:CDS |
| GTTGAGGAAGAAGAAGCGAA+AGG | 0.577995 | 7_4:-21469053 | Msa1144980:CDS |
| GCTCAAATATGGGACACTGC+CGG | 0.581270 | 7_4:-21470945 | Msa1144980:CDS |
| GTTCAGATTCTTCAAAGCAG+AGG | 0.583572 | 7_4:+21468995 | None:intergenic |
| TGTTGTTCATGATCGATGAG+AGG | 0.584982 | 7_4:-21468819 | Msa1144980:exon |
| AAATGGGTACAAAATCATCA+TGG | 0.590917 | 7_4:+21468698 | None:intergenic |
| AGAGTTTGGTGGCAAAGAGA+TGG | 0.594242 | 7_4:-21469123 | Msa1144980:CDS |
| CGATCAAGTTATGAGAGTGT+AGG | 0.595817 | 7_4:-21469167 | Msa1144980:CDS |
| GTTATGAGAGTGTAGGCAGA+TGG | 0.605062 | 7_4:-21469160 | Msa1144980:CDS |
| ACAAGGAGCCTGTTTAGTTG+CGG | 0.617033 | 7_4:+21468839 | None:intergenic |
| AAGGGTTTGCAGAGGCAGAA+GGG | 0.631053 | 7_4:-21469034 | Msa1144980:CDS |
| ATCCTAGCTAGCAACATCAA+GGG | 0.631981 | 7_4:+21468663 | None:intergenic |
| ACCGTAATGAATGAACAAGT+GGG | 0.638024 | 7_4:+21468763 | None:intergenic |
| AGAAGCGAAAGGGTTTGCAG+AGG | 0.645160 | 7_4:-21469042 | Msa1144980:CDS |
| CTCATCGATCATGAACAACA+AGG | 0.664580 | 7_4:+21468822 | None:intergenic |
| TGCTAGTGTATGACATAACG+AGG | 0.677719 | 7_4:-21469190 | Msa1144980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAGATATATATATTAA+TGG | - | chr7_4:21468694-21468713 | Msa1144980:three_prime_UTR | 10.0% |
| !!! | TAATTTTATTCAGAACTTTA+TGG | + | chr7_4:21469027-21469046 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTAACTTGTTAA+CGG | - | chr7_4:21469527-21469546 | Msa1144980:intron | 15.0% |
| !!! | TAAGCTTTCTTTTTATAAAT+CGG | - | chr7_4:21469679-21469698 | Msa1144980:intron | 15.0% |
| !!! | AATAGTGCAATTATTTTTAT+GGG | + | chr7_4:21469845-21469864 | None:intergenic | 15.0% |
| !!! | AAATAGTGCAATTATTTTTA+TGG | + | chr7_4:21469846-21469865 | None:intergenic | 15.0% |
| !! | TTACATTATTATTTACATGA+TGG | + | chr7_4:21470057-21470076 | None:intergenic | 15.0% |
| !! | TTTCTAATCATATAAAACTT+AGG | - | chr7_4:21470244-21470263 | Msa1144980:intron | 15.0% |
| !!! | ATATTGATTAATTAATTGTG+TGG | - | chr7_4:21470584-21470603 | Msa1144980:intron | 15.0% |
| !!! | CTAATTTTGTCAAATTCAAT+TGG | + | chr7_4:21469418-21469437 | None:intergenic | 20.0% |
| !! | GAAAAGAAAACTAAAGATAA+AGG | + | chr7_4:21469897-21469916 | None:intergenic | 20.0% |
| !! | CTACAAAAATATACTACTAT+AGG | + | chr7_4:21470333-21470352 | None:intergenic | 20.0% |
| !! | ACTATAACAAATATATGGAT+GGG | - | chr7_4:21470555-21470574 | Msa1144980:intron | 20.0% |
| !!! | TTACGGTTTTGAATTTTTAT+TGG | - | chr7_4:21471106-21471125 | Msa1144980:CDS | 20.0% |
| !!! | TTTTGTTTTCCAATTCAAAG+TGG | - | chr7_4:21469144-21469163 | Msa1144980:CDS | 25.0% |
| !!! | TTTGTTTTCCAATTCAAAGT+GGG | - | chr7_4:21469145-21469164 | Msa1144980:CDS | 25.0% |
| ! | AAGATAAGATATCATCATCA+CGG | + | chr7_4:21469368-21469387 | None:intergenic | 25.0% |
| ! | TTAAAAAACAAAACCACAGT+TGG | + | chr7_4:21469519-21469538 | None:intergenic | 25.0% |
| ! | GAATTGCTTAATCTCTTTAT+TGG | - | chr7_4:21469571-21469590 | Msa1144980:intron | 25.0% |
| ! | CTTAATCTCTTTATTGGAAT+TGG | - | chr7_4:21469577-21469596 | Msa1144980:intron | 25.0% |
| ! | AAGCTTAAAAGTAGAAAGTT+GGG | + | chr7_4:21469666-21469685 | None:intergenic | 25.0% |
| ! | AAAGCTTAAAAGTAGAAAGT+TGG | + | chr7_4:21469667-21469686 | None:intergenic | 25.0% |
| ! | TAAATGAATAGCGTAACTAT+TGG | - | chr7_4:21470085-21470104 | Msa1144980:intron | 25.0% |
| ! | AAATGAATAGCGTAACTATT+GGG | - | chr7_4:21470086-21470105 | Msa1144980:intron | 25.0% |
| ! | GATTAGAAAGATGAAATTGT+TGG | + | chr7_4:21470233-21470252 | None:intergenic | 25.0% |
| ! | TATAAAACTTAGGTATTCCA+TGG | - | chr7_4:21470254-21470273 | Msa1144980:intron | 25.0% |
| !! | ATGAAATATTTGTTAGACCT+CGG | - | chr7_4:21470416-21470435 | Msa1144980:intron | 25.0% |
| ! | GACTCACTATAACAAATATA+TGG | - | chr7_4:21470550-21470569 | Msa1144980:intron | 25.0% |
| ! | CACTATAACAAATATATGGA+TGG | - | chr7_4:21470554-21470573 | Msa1144980:intron | 25.0% |
| ! | CTATAACAAATATATGGATG+GGG | - | chr7_4:21470556-21470575 | Msa1144980:intron | 25.0% |
| ! | TATAACAAATATATGGATGG+GGG | - | chr7_4:21470557-21470576 | Msa1144980:intron | 25.0% |
| ! | ACACCAATTAATCTATCTAA+CGG | - | chr7_4:21470962-21470981 | Msa1144980:CDS | 25.0% |
| !! | ATTGGTAATTCGTTATGAAA+CGG | - | chr7_4:21471124-21471143 | Msa1144980:CDS | 25.0% |
| GAGCGAAGAAAGTAAAAATA+GGG | + | chr7_4:21468610-21468629 | None:intergenic | 30.0% | |
| AGAGCGAAGAAAGTAAAAAT+AGG | + | chr7_4:21468611-21468630 | None:intergenic | 30.0% | |
| TACAATAAGTTCCAAAGAGA+AGG | + | chr7_4:21468655-21468674 | None:intergenic | 30.0% | |
| ATTTGCATACAGAAACATCA+AGG | - | chr7_4:21468865-21468884 | Msa1144980:CDS | 30.0% | |
| AACTCATCAAAGCTCAAATA+TGG | - | chr7_4:21468897-21468916 | Msa1144980:CDS | 30.0% | |
| ACTCATCAAAGCTCAAATAT+GGG | - | chr7_4:21468898-21468917 | Msa1144980:CDS | 30.0% | |
| ! | AGAAAGACTGATTCTTTGAT+TGG | + | chr7_4:21468955-21468974 | None:intergenic | 30.0% |
| TTATGGATTTCGTTCATCAT+TGG | + | chr7_4:21469010-21469029 | None:intergenic | 30.0% | |
| ! | TTGTTTTCCAATTCAAAGTG+GGG | - | chr7_4:21469146-21469165 | Msa1144980:CDS | 30.0% |
| TTATGATCTTAGTGTCTTCA+GGG | + | chr7_4:21469480-21469499 | None:intergenic | 30.0% | |
| ATTATGATCTTAGTGTCTTC+AGG | + | chr7_4:21469481-21469500 | None:intergenic | 30.0% | |
| TCTCTTTATTGGAATTGGAA+TGG | - | chr7_4:21469582-21469601 | Msa1144980:intron | 30.0% | |
| AGCTTAAAAGTAGAAAGTTG+GGG | + | chr7_4:21469665-21469684 | None:intergenic | 30.0% | |
| !! | TCTCTAGAATAAGTTGAACA+AGG | + | chr7_4:21470133-21470152 | None:intergenic | 30.0% |
| ATACCTCATACTTAGTCTAA+AGG | - | chr7_4:21470371-21470390 | Msa1144980:intron | 30.0% | |
| GTAAAACATATTGAGAGCAA+TGG | + | chr7_4:21470517-21470536 | None:intergenic | 30.0% | |
| ATAACAAATATATGGATGGG+GGG | - | chr7_4:21470558-21470577 | Msa1144980:intron | 30.0% | |
| ATTAATTAATTGTGTGGCAC+TGG | - | chr7_4:21470590-21470609 | Msa1144980:intron | 30.0% | |
| ATCACAAGTTCGTATTATAG+AGG | - | chr7_4:21470626-21470645 | Msa1144980:intron | 30.0% | |
| CACCAATTAATCTATCTAAC+GGG | - | chr7_4:21470963-21470982 | Msa1144980:CDS | 30.0% | |
| TTCCCGTTAGATAGATTAAT+TGG | + | chr7_4:21470968-21470987 | None:intergenic | 30.0% | |
| AATGAACAAGTGGGAAAAAT+TGG | + | chr7_4:21471084-21471103 | None:intergenic | 30.0% | |
| AAATGGGTACAAAATCATCA+TGG | + | chr7_4:21471158-21471177 | None:intergenic | 30.0% | |
| AGGGATCACTTATATCAAAT+GGG | + | chr7_4:21471174-21471193 | None:intergenic | 30.0% | |
| AAGGGATCACTTATATCAAA+TGG | + | chr7_4:21471175-21471194 | None:intergenic | 30.0% | |
| TTCCAAAGAGAAGGTTATTC+TGG | + | chr7_4:21468646-21468665 | None:intergenic | 35.0% | |
| AGAGTGTGATTACTTGTTCA+AGG | - | chr7_4:21468742-21468761 | Msa1144980:three_prime_UTR | 35.0% | |
| GGAAATCAAATCTGCTTTCA+AGG | - | chr7_4:21468792-21468811 | Msa1144980:three_prime_UTR | 35.0% | |
| GGTTTGCAAAAGATGAATTC+AGG | - | chr7_4:21468813-21468832 | Msa1144980:exon | 35.0% | |
| TGCAAAAGATGAATTCAGGT+TGG | - | chr7_4:21468817-21468836 | Msa1144980:exon | 35.0% | |
| TTGGATTCAAAGCCAACTAT+AGG | - | chr7_4:21468836-21468855 | Msa1144980:CDS | 35.0% | |
| GCAAATTCAACTCCTATAGT+TGG | + | chr7_4:21468851-21468870 | None:intergenic | 35.0% | |
| ! | GACTGATTCTTTGATTGGAA+GGG | + | chr7_4:21468950-21468969 | None:intergenic | 35.0% |
| ! | AGACTGATTCTTTGATTGGA+AGG | + | chr7_4:21468951-21468970 | None:intergenic | 35.0% |
| ATATTCATTCGCAAACCCAT+TGG | + | chr7_4:21469173-21469192 | None:intergenic | 35.0% | |
| TAACTAGAATTCAATCCGAG+TGG | - | chr7_4:21469452-21469471 | Msa1144980:intron | 35.0% | |
| AACTAGAATTCAATCCGAGT+GGG | - | chr7_4:21469453-21469472 | Msa1144980:intron | 35.0% | |
| CACAGTTGGAATTCAATTCA+CGG | + | chr7_4:21469505-21469524 | None:intergenic | 35.0% | |
| ACGGAATGTAATACTGCTTA+AGG | - | chr7_4:21469546-21469565 | Msa1144980:intron | 35.0% | |
| CGGAATGTAATACTGCTTAA+GGG | - | chr7_4:21469547-21469566 | Msa1144980:intron | 35.0% | |
| ATTGGAATTGGAATGGAAAG+TGG | - | chr7_4:21469589-21469608 | Msa1144980:intron | 35.0% | |
| AAGTAGAAAGTTGGGGAAAA+AGG | + | chr7_4:21469658-21469677 | None:intergenic | 35.0% | |
| ! | TTTCTCATGATGAAAGTGCA+AGG | + | chr7_4:21469919-21469938 | None:intergenic | 35.0% |
| ATGATGTGAGTTCAAAGAGT+AGG | - | chr7_4:21469979-21469998 | Msa1144980:intron | 35.0% | |
| AAGAGCAGATAGACAATCAA+TGG | - | chr7_4:21470181-21470200 | Msa1144980:intron | 35.0% | |
| ATAGACAATCAATGGATGTG+AGG | - | chr7_4:21470189-21470208 | Msa1144980:intron | 35.0% | |
| AGTCCTTTAGACTAAGTATG+AGG | + | chr7_4:21470377-21470396 | None:intergenic | 35.0% | |
| ! | AGATTTCAGTCCTTTTGATC+TGG | + | chr7_4:21470443-21470462 | None:intergenic | 35.0% |
| AAAGGACTGAAATCTCATGT+CGG | - | chr7_4:21470448-21470467 | Msa1144980:intron | 35.0% | |
| ATTGAGAGCAATGGTTTGAT+GGG | + | chr7_4:21470508-21470527 | None:intergenic | 35.0% | |
| TATTGAGAGCAATGGTTTGA+TGG | + | chr7_4:21470509-21470528 | None:intergenic | 35.0% | |
| GAGATGGTAGTTATTCTAGT+TGG | - | chr7_4:21470746-21470765 | Msa1144980:intron | 35.0% | |
| GTTGGAAACAAATGTGATCT+TGG | - | chr7_4:21470764-21470783 | Msa1144980:intron | 35.0% | |
| !! | AATTGGTGTCTCATCCATTT+TGG | + | chr7_4:21470951-21470970 | None:intergenic | 35.0% |
| TCCCACTTGTTCATTCATTA+CGG | - | chr7_4:21471089-21471108 | Msa1144980:CDS | 35.0% | |
| ACCGTAATGAATGAACAAGT+GGG | + | chr7_4:21471093-21471112 | None:intergenic | 35.0% | |
| AACCGTAATGAATGAACAAG+TGG | + | chr7_4:21471094-21471113 | None:intergenic | 35.0% | |
| GTCCAGAATAACCTTCTCTT+TGG | - | chr7_4:21468641-21468660 | Msa1144980:three_prime_UTR | 40.0% | |
| !! | TGATTGGTGATTCTGGAGTT+GGG | - | chr7_4:21468771-21468790 | Msa1144980:three_prime_UTR | 40.0% |
| AATTCAAAGTGGGGTCCAAT+GGG | - | chr7_4:21469155-21469174 | Msa1144980:CDS | 40.0% | |
| CGTGAATTGAATTCCAACTG+TGG | - | chr7_4:21469503-21469522 | Msa1144980:intron | 40.0% | |
| TTTAATCACTCCGAGTGATG+TGG | - | chr7_4:21469733-21469752 | Msa1144980:intron | 40.0% | |
| CAAAGAGTAGGATTCACTCT+TGG | - | chr7_4:21469991-21470010 | Msa1144980:intron | 40.0% | |
| TAGGTATTCCATGGAGTTAG+AGG | - | chr7_4:21470263-21470282 | Msa1144980:intron | 40.0% | |
| ! | CTGAGTATATTGGTTATGGC+TGG | + | chr7_4:21470485-21470504 | None:intergenic | 40.0% |
| ! | TGGGCTGAGTATATTGGTTA+TGG | + | chr7_4:21470489-21470508 | None:intergenic | 40.0% |
| !! | GTTTGATGGGCTGAGTATAT+TGG | + | chr7_4:21470495-21470514 | None:intergenic | 40.0% |
| TTCGTATTATAGAGGAGCCT+TGG | - | chr7_4:21470634-21470653 | Msa1144980:intron | 40.0% | |
| TCGTATTATAGAGGAGCCTT+GGG | - | chr7_4:21470635-21470654 | Msa1144980:intron | 40.0% | |
| TGCTAGTGTATGACATAACG+AGG | - | chr7_4:21470663-21470682 | Msa1144980:intron | 40.0% | |
| ! | CGATCAAGTTATGAGAGTGT+AGG | - | chr7_4:21470686-21470705 | Msa1144980:intron | 40.0% |
| TGGTGAATCAAGAGAAGTTG+AGG | - | chr7_4:21470784-21470803 | Msa1144980:intron | 40.0% | |
| TTGAGGAAGAAGAAGCGAAA+GGG | - | chr7_4:21470801-21470820 | Msa1144980:intron | 40.0% | |
| GTTCAGATTCTTCAAAGCAG+AGG | + | chr7_4:21470861-21470880 | None:intergenic | 40.0% | |
| CATCACAAACCAGAGAAGTT+TGG | - | chr7_4:21470922-21470941 | Msa1144980:intron | 40.0% | |
| ! | TTTTGGCATCCAAACTTCTC+TGG | + | chr7_4:21470934-21470953 | None:intergenic | 40.0% |
| GAGAAGTTTGGATGCCAAAA+TGG | - | chr7_4:21470934-21470953 | Msa1144980:intron | 40.0% | |
| TGAAGTTACCGCAACTAAAC+AGG | - | chr7_4:21471006-21471025 | Msa1144980:CDS | 40.0% | |
| CTCATCGATCATGAACAACA+AGG | + | chr7_4:21471034-21471053 | None:intergenic | 40.0% | |
| TGTTGTTCATGATCGATGAG+AGG | - | chr7_4:21471034-21471053 | Msa1144980:CDS | 40.0% | |
| ! | TCATGATCGATGAGAGGTTT+TGG | - | chr7_4:21471040-21471059 | Msa1144980:CDS | 40.0% |
| GGTACAAAATCATCATGGTC+AGG | + | chr7_4:21471153-21471172 | None:intergenic | 40.0% | |
| ATCCTAGCTAGCAACATCAA+GGG | + | chr7_4:21471193-21471212 | None:intergenic | 40.0% | |
| !! | TTGTTCAAGGCAGTGCTGAT+TGG | - | chr7_4:21468755-21468774 | Msa1144980:three_prime_UTR | 45.0% |
| !! | CTGATTGGTGATTCTGGAGT+TGG | - | chr7_4:21468770-21468789 | Msa1144980:three_prime_UTR | 45.0% |
| GGAAGGGAAGTTACCTTTCT+TGG | + | chr7_4:21468934-21468953 | None:intergenic | 45.0% | |
| CATTGGACCCCACTTTGAAT+TGG | + | chr7_4:21469156-21469175 | None:intergenic | 45.0% | |
| CAATTCAAAGTGGGGTCCAA+TGG | - | chr7_4:21469154-21469173 | Msa1144980:CDS | 45.0% | |
| CACAGCAAAGGAGGAAATCA+CGG | + | chr7_4:21469622-21469641 | None:intergenic | 45.0% | |
| ! | GTGATTTCCTCCTTTGCTGT+GGG | - | chr7_4:21469621-21469640 | Msa1144980:intron | 45.0% |
| AAGGGTTCATCCACATCACT+CGG | + | chr7_4:21469746-21469765 | None:intergenic | 45.0% | |
| AGCGTAACTATTGGGAGAAG+CGG | - | chr7_4:21470094-21470113 | Msa1144980:intron | 45.0% | |
| AGTTGAACAAGGCCATGTCA+TGG | + | chr7_4:21470122-21470141 | None:intergenic | 45.0% | |
| GACAATCAATGGATGTGAGG+TGG | - | chr7_4:21470192-21470211 | Msa1144980:intron | 45.0% | |
| ! | ATGTGAGGTGGTGAAGGTTT+TGG | - | chr7_4:21470204-21470223 | Msa1144980:intron | 45.0% |
| !! | ATTAATTGTGTGGCACTGGC+AGG | - | chr7_4:21470594-21470613 | Msa1144980:intron | 45.0% |
| ATACACTAGCAATGCTCCCA+AGG | + | chr7_4:21470654-21470673 | None:intergenic | 45.0% | |
| ! | GTTATGAGAGTGTAGGCAGA+TGG | - | chr7_4:21470693-21470712 | Msa1144980:intron | 45.0% |
| TTAGTGGAGCTACGAGAGTT+TGG | - | chr7_4:21470716-21470735 | Msa1144980:intron | 45.0% | |
| ! | AGAGTTTGGTGGCAAAGAGA+TGG | - | chr7_4:21470730-21470749 | Msa1144980:intron | 45.0% |
| GTTGAGGAAGAAGAAGCGAA+AGG | - | chr7_4:21470800-21470819 | Msa1144980:intron | 45.0% | |
| ! | GGCAGAAGGGTTGTGTTTTA+TGG | - | chr7_4:21470832-21470851 | Msa1144980:intron | 45.0% |
| ACAAGGAGCCTGTTTAGTTG+CGG | + | chr7_4:21471017-21471036 | None:intergenic | 45.0% | |
| ATCCCTTGATGTTGCTAGCT+AGG | - | chr7_4:21471188-21471207 | Msa1144980:five_prime_UTR | 45.0% | |
| CATCCTAGCTAGCAACATCA+AGG | + | chr7_4:21471194-21471213 | None:intergenic | 45.0% | |
| !! | AATATAAAATTATCTTAAAA+GGG | + | chr7_4:21469764-21469783 | None:intergenic | 5.0% |
| !! | AAATATAAAATTATCTTAAA+AGG | + | chr7_4:21469765-21469784 | None:intergenic | 5.0% |
| !! | GCAGTGCTGATTGGTGATTC+TGG | - | chr7_4:21468764-21468783 | Msa1144980:three_prime_UTR | 50.0% |
| GCTCAAATATGGGACACTGC+CGG | - | chr7_4:21468908-21468927 | Msa1144980:CDS | 50.0% | |
| GGGAAGTTACCTTTCTTGGC+CGG | + | chr7_4:21468930-21468949 | None:intergenic | 50.0% | |
| CGTGATTTCCTCCTTTGCTG+TGG | - | chr7_4:21469620-21469639 | Msa1144980:intron | 50.0% | |
| !! | ACAAGAAGCACCCACAGCAA+AGG | + | chr7_4:21469634-21469653 | None:intergenic | 50.0% |
| GCGTAACTATTGGGAGAAGC+GGG | - | chr7_4:21470095-21470114 | Msa1144980:intron | 50.0% | |
| CAATGGATGTGAGGTGGTGA+AGG | - | chr7_4:21470198-21470217 | Msa1144980:intron | 50.0% | |
| GAGACACACCTCTAACTCCA+TGG | + | chr7_4:21470274-21470293 | None:intergenic | 50.0% | |
| AGACCTCGGACCAGATCAAA+AGG | - | chr7_4:21470430-21470449 | Msa1144980:intron | 50.0% | |
| ! | AGTCCTTTTGATCTGGTCCG+AGG | + | chr7_4:21470436-21470455 | None:intergenic | 50.0% |
| GAGTGTAGGCAGATGGTTAG+TGG | - | chr7_4:21470700-21470719 | Msa1144980:intron | 50.0% | |
| AGAAGCGAAAGGGTTTGCAG+AGG | - | chr7_4:21470811-21470830 | Msa1144980:intron | 50.0% | |
| AAAGGGTTTGCAGAGGCAGA+AGG | - | chr7_4:21470818-21470837 | Msa1144980:intron | 50.0% | |
| AAGGGTTTGCAGAGGCAGAA+GGG | - | chr7_4:21470819-21470838 | Msa1144980:intron | 50.0% | |
| AGTGTCTTCAGGGTCCCACT+CGG | + | chr7_4:21469470-21469489 | None:intergenic | 55.0% | |
| !! | AGAAGCACCCACAGCAAAGG+AGG | + | chr7_4:21469631-21469650 | None:intergenic | 55.0% |
| GTGGAGCTACGAGAGTTTGG+TGG | - | chr7_4:21470719-21470738 | Msa1144980:intron | 55.0% | |
| GGAGAAGCGGGTCCATGACA+TGG | - | chr7_4:21470107-21470126 | Msa1144980:intron | 60.0% | |
| GGGACACTGCCGGCCAAGAA+AGG | - | chr7_4:21468918-21468937 | Msa1144980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 21468600 | 21471275 | 21468600 | ID=Msa1144980;Name=Msa1144980 |
| chr7_4 | mRNA | 21468600 | 21471275 | 21468600 | ID=Msa1144980-mRNA-1;Parent=Msa1144980;Name=Msa1144980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=113|1|1|1|1|1|2|230|218 |
| chr7_4 | exon | 21468600 | 21469259 | 21468600 | ID=Msa1144980-mRNA-1:exon:5179;Parent=Msa1144980-mRNA-1 |
| chr7_4 | exon | 21470936 | 21471275 | 21470936 | ID=Msa1144980-mRNA-1:exon:5178;Parent=Msa1144980-mRNA-1 |
| chr7_4 | five_prime_UTR | 21471163 | 21471275 | 21471163 | ID=Msa1144980-mRNA-1:five_prime_utr;Parent=Msa1144980-mRNA-1 |
| chr7_4 | CDS | 21470936 | 21471162 | 21470936 | ID=Msa1144980-mRNA-1:cds;Parent=Msa1144980-mRNA-1 |
| chr7_4 | CDS | 21468830 | 21469259 | 21468830 | ID=Msa1144980-mRNA-1:cds;Parent=Msa1144980-mRNA-1 |
| chr7_4 | three_prime_UTR | 21468600 | 21468829 | 21468600 | ID=Msa1144980-mRNA-1:three_prime_utr;Parent=Msa1144980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
