Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695370 | KEH31014.1 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695370 | A0A072UMK6 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0695370 | 0.802624 | 5.134861e-49 | -8.615850e-47 |
| Msa0012440 | Msa0695370 | 0.811592 | 6.482551e-51 | -8.615850e-47 |
| Msa0017120 | Msa0695370 | 0.814217 | 1.723720e-51 | -8.615850e-47 |
| Msa0029620 | Msa0695370 | 0.819518 | 1.113440e-52 | -8.615850e-47 |
| Msa0030000 | Msa0695370 | 0.828667 | 7.915880e-55 | -8.615850e-47 |
| Msa0030730 | Msa0695370 | 0.800995 | 1.109165e-48 | -8.615850e-47 |
| Msa0042220 | Msa0695370 | 0.831789 | 1.367820e-55 | -8.615850e-47 |
| Msa0055280 | Msa0695370 | 0.809784 | 1.594589e-50 | -8.615850e-47 |
| Msa0057240 | Msa0695370 | 0.805843 | 1.097420e-49 | -8.615850e-47 |
| Msa0060600 | Msa0695370 | 0.810914 | 9.093852e-51 | -8.615850e-47 |
| Msa0062750 | Msa0695370 | 0.814639 | 1.390898e-51 | -8.615850e-47 |
| Msa0065390 | Msa0695370 | 0.802012 | 6.864232e-49 | -8.615850e-47 |
| Msa0074230 | Msa0695370 | 0.827018 | 1.972385e-54 | -8.615850e-47 |
| Msa0075310 | Msa0695370 | 0.803048 | 4.197850e-49 | -8.615850e-47 |
| Msa0084680 | Msa0695370 | 0.802799 | 4.726325e-49 | -8.615850e-47 |
| Msa0091770 | Msa0695370 | 0.807302 | 5.402836e-50 | -8.615850e-47 |
| Msa0094420 | Msa0695370 | 0.829688 | 4.474821e-55 | -8.615850e-47 |
| Msa0105340 | Msa0695370 | 0.806385 | 8.439692e-50 | -8.615850e-47 |
| Msa0110710 | Msa0695370 | 0.802438 | 5.610966e-49 | -8.615850e-47 |
| Msa0605620 | Msa0695370 | 0.801965 | 7.019402e-49 | -8.615850e-47 |
| Msa0614230 | Msa0695370 | 0.809198 | 2.130172e-50 | -8.615850e-47 |
| Msa0619330 | Msa0695370 | 0.806006 | 1.014092e-49 | -8.615850e-47 |
| Msa0619980 | Msa0695370 | 0.828051 | 1.114613e-54 | -8.615850e-47 |
| Msa0620750 | Msa0695370 | 0.806360 | 8.541964e-50 | -8.615850e-47 |
| Msa0621890 | Msa0695370 | 0.820419 | 6.928885e-53 | -8.615850e-47 |
| Msa0622390 | Msa0695370 | 0.813227 | 2.847502e-51 | -8.615850e-47 |
| Msa0624730 | Msa0695370 | 0.802437 | 5.611883e-49 | -8.615850e-47 |
| Msa0626230 | Msa0695370 | 0.814437 | 1.541375e-51 | -8.615850e-47 |
| Msa0640880 | Msa0695370 | 0.802823 | 4.672777e-49 | -8.615850e-47 |
| Msa0642910 | Msa0695370 | 0.821580 | 3.743210e-53 | -8.615850e-47 |
| Msa0652980 | Msa0695370 | 0.902403 | 1.005041e-78 | -8.615850e-47 |
| Msa0653710 | Msa0695370 | 0.824043 | 9.993525e-54 | -8.615850e-47 |
| Msa0654060 | Msa0695370 | 0.836178 | 1.089584e-56 | -8.615850e-47 |
| Msa0663090 | Msa0695370 | 0.830197 | 3.363368e-55 | -8.615850e-47 |
| Msa0667220 | Msa0695370 | 0.807444 | 5.039109e-50 | -8.615850e-47 |
| Msa0674220 | Msa0695370 | 0.806007 | 1.013840e-49 | -8.615850e-47 |
| Msa0681890 | Msa0695370 | 0.812612 | 3.884688e-51 | -8.615850e-47 |
| Msa0693570 | Msa0695370 | 0.823357 | 1.447041e-53 | -8.615850e-47 |
| Msa0695370 | Msa0706370 | 0.821774 | 3.376837e-53 | -8.615850e-47 |
| Msa0695370 | Msa0707780 | 0.821385 | 4.152063e-53 | -8.615850e-47 |
| Msa0695370 | Msa0719340 | 0.826128 | 3.215081e-54 | -8.615850e-47 |
| Msa0695370 | Msa0724050 | 0.813693 | 2.249735e-51 | -8.615850e-47 |
| Msa0695370 | Msa0739610 | 0.806652 | 7.412391e-50 | -8.615850e-47 |
| Msa0695370 | Msa0740420 | 0.822440 | 2.365847e-53 | -8.615850e-47 |
| Msa0695370 | Msa0743640 | 0.823420 | 1.398698e-53 | -8.615850e-47 |
| Msa0695370 | Msa0763880 | 0.804869 | 1.756438e-49 | -8.615850e-47 |
| Msa0695370 | Msa0772020 | 0.820783 | 5.713624e-53 | -8.615850e-47 |
| Msa0695370 | Msa0772150 | 0.822806 | 1.945427e-53 | -8.615850e-47 |
| Msa0695370 | Msa0787720 | 0.808923 | 2.439897e-50 | -8.615850e-47 |
| Msa0695370 | Msa0807730 | 0.817552 | 3.107601e-52 | -8.615850e-47 |
| Msa0695370 | Msa0810020 | 0.819364 | 1.207422e-52 | -8.615850e-47 |
| Msa0695370 | Msa0811510 | 0.803910 | 2.782301e-49 | -8.615850e-47 |
| Msa0695370 | Msa0820670 | 0.843770 | 1.142394e-58 | -8.615850e-47 |
| Msa0695370 | Msa0824770 | 0.817853 | 2.658746e-52 | -8.615850e-47 |
| Msa0695370 | Msa0850500 | 0.806921 | 6.505156e-50 | -8.615850e-47 |
| Msa0695370 | Msa0851740 | 0.804339 | 2.265633e-49 | -8.615850e-47 |
| Msa0695370 | Msa0863760 | 0.823497 | 1.341715e-53 | -8.615850e-47 |
| Msa0695370 | Msa0873190 | 0.802461 | 5.549623e-49 | -8.615850e-47 |
| Msa0695370 | Msa0887070 | 0.801927 | 7.145413e-49 | -8.615850e-47 |
| Msa0695370 | Msa0903730 | 0.815168 | 1.061428e-51 | -8.615850e-47 |
| Msa0695370 | Msa0907700 | 0.820504 | 6.623628e-53 | -8.615850e-47 |
| Msa0695370 | Msa0925160 | 0.803315 | 3.696605e-49 | -8.615850e-47 |
| Msa0695370 | Msa0930330 | 0.837190 | 6.014932e-57 | -8.615850e-47 |
| Msa0695370 | Msa0951710 | 0.802525 | 5.382954e-49 | -8.615850e-47 |
| Msa0695370 | Msa0973230 | 0.807555 | 4.774518e-50 | -8.615850e-47 |
| Msa0695370 | Msa0975580 | 0.802582 | 5.240095e-49 | -8.615850e-47 |
| Msa0695370 | Msa0978000 | 0.807994 | 3.851520e-50 | -8.615850e-47 |
| Msa0695370 | Msa0988480 | 0.816187 | 6.293971e-52 | -8.615850e-47 |
| Msa0695370 | Msa0990520 | 0.801308 | 9.572518e-49 | -8.615850e-47 |
| Msa0695370 | Msa1002040 | 0.807392 | 5.168758e-50 | -8.615850e-47 |
| Msa0695370 | Msa1018790 | 0.809864 | 1.532698e-50 | -8.615850e-47 |
| Msa0695370 | Msa1032350 | 0.822336 | 2.501183e-53 | -8.615850e-47 |
| Msa0695370 | Msa1033560 | 0.802379 | 5.769289e-49 | -8.615850e-47 |
| Msa0695370 | Msa1038320 | 0.801535 | 8.602169e-49 | -8.615850e-47 |
| Msa0695370 | Msa1044040 | 0.826200 | 3.090174e-54 | -8.615850e-47 |
| Msa0695370 | Msa1048710 | 0.801761 | 7.730404e-49 | -8.615850e-47 |
| Msa0695370 | Msa1069300 | 0.807640 | 4.579748e-50 | -8.615850e-47 |
| Msa0695370 | Msa1072350 | 0.830783 | 2.417431e-55 | -8.615850e-47 |
| Msa0695370 | Msa1073350 | 0.806872 | 6.659551e-50 | -8.615850e-47 |
| Msa0695370 | Msa1100490 | 0.809995 | 1.436393e-50 | -8.615850e-47 |
| Msa0695370 | Msa1118140 | 0.842808 | 2.062263e-58 | -8.615850e-47 |
| Msa0695370 | Msa1125780 | 0.800155 | 1.645742e-48 | -8.615850e-47 |
| Msa0695370 | Msa1125950 | 0.803478 | 3.420355e-49 | -8.615850e-47 |
| Msa0695370 | Msa1159360 | 0.811937 | 5.451924e-51 | -8.615850e-47 |
| Msa0695370 | Msa1171340 | 0.804459 | 2.138286e-49 | -8.615850e-47 |
| Msa0695370 | Msa1201990 | 0.822458 | 2.343951e-53 | -8.615850e-47 |
| Msa0695370 | Msa1210770 | 0.818280 | 2.128557e-52 | -8.615850e-47 |
| Msa0695370 | Msa1213060 | 0.805815 | 1.112588e-49 | -8.615850e-47 |
| Msa0695370 | Msa1220230 | 0.809574 | 1.769407e-50 | -8.615850e-47 |
| Msa0695370 | Msa1220450 | -0.803839 | 2.878438e-49 | -8.615850e-47 |
| Msa0695370 | Msa1220460 | -0.803787 | 2.950187e-49 | -8.615850e-47 |
| Msa0695370 | Msa1220480 | -0.802793 | 4.740482e-49 | -8.615850e-47 |
| Msa0695370 | Msa1221260 | 0.804841 | 1.779837e-49 | -8.615850e-47 |
| Msa0695370 | Msa1254190 | 0.814279 | 1.670344e-51 | -8.615850e-47 |
| Msa0695370 | Msa1254770 | 0.818392 | 2.007736e-52 | -8.615850e-47 |
| Msa0695370 | Msa1254800 | 0.814278 | 1.671650e-51 | -8.615850e-47 |
| Msa0695370 | Msa1302150 | 0.803811 | 2.917204e-49 | -8.615850e-47 |
| Msa0695370 | Msa1327820 | 0.838089 | 3.537917e-57 | -8.615850e-47 |
| Msa0695370 | Msa1329990 | 0.808967 | 2.387714e-50 | -8.615850e-47 |
| Msa0695370 | Msa1352290 | 0.805041 | 1.616429e-49 | -8.615850e-47 |
| Msa0695370 | Msa1354040 | 0.805781 | 1.130906e-49 | -8.615850e-47 |
| Msa0695370 | Msa1366620 | 0.801313 | 9.549293e-49 | -8.615850e-47 |
| Msa0695370 | Msa1367940 | 0.812945 | 3.283653e-51 | -8.615850e-47 |
| Msa0695370 | Msa1381130 | 0.828800 | 7.351533e-55 | -8.615850e-47 |
| Msa0695370 | Msa1397540 | 0.814170 | 1.765579e-51 | -8.615850e-47 |
| Msa0695370 | Msa1418200 | 0.815112 | 1.092272e-51 | -8.615850e-47 |
| Msa0695370 | Msa1429420 | 0.801518 | 8.669140e-49 | -8.615850e-47 |
| Msa0695370 | Msa1431000 | 0.801220 | 9.979543e-49 | -8.615850e-47 |
| Msa0695370 | Msa1435040 | 0.800160 | 1.641617e-48 | -8.615850e-47 |
| Msa0695370 | Msa1435470 | 0.814404 | 1.567532e-51 | -8.615850e-47 |
| Msa0695370 | Msa1435670 | 0.813879 | 2.046807e-51 | -8.615850e-47 |
| Msa0695370 | Msa1445790 | 0.802794 | 4.737618e-49 | -8.615850e-47 |
| Msa0695370 | Msa1455620 | 0.807925 | 3.983679e-50 | -8.615850e-47 |
| Msa0695370 | Msa1456810 | 0.815973 | 7.024156e-52 | -8.615850e-47 |
| Msa0695370 | Msa1458920 | 0.822170 | 2.733777e-53 | -8.615850e-47 |
| Msa0695370 | Msa1464560 | 0.801779 | 7.664095e-49 | -8.615850e-47 |
| Msa0122180 | Msa0695370 | 0.800879 | 1.171422e-48 | -8.615850e-47 |
| Msa0125230 | Msa0695370 | 0.810487 | 1.125107e-50 | -8.615850e-47 |
| Msa0125440 | Msa0695370 | 0.800490 | 1.406511e-48 | -8.615850e-47 |
| Msa0133440 | Msa0695370 | 0.804821 | 1.797241e-49 | -8.615850e-47 |
| Msa0135980 | Msa0695370 | 0.806089 | 9.745314e-50 | -8.615850e-47 |
| Msa0141670 | Msa0695370 | 0.816723 | 4.775063e-52 | -8.615850e-47 |
| Msa0142870 | Msa0695370 | 0.844837 | 5.903656e-59 | -8.615850e-47 |
| Msa0147550 | Msa0695370 | 0.831583 | 1.537881e-55 | -8.615850e-47 |
| Msa0149500 | Msa0695370 | 0.801410 | 9.123877e-49 | -8.615850e-47 |
| Msa0149560 | Msa0695370 | 0.807006 | 6.241485e-50 | -8.615850e-47 |
| Msa0157020 | Msa0695370 | 0.806317 | 8.724989e-50 | -8.615850e-47 |
| Msa0169620 | Msa0695370 | 0.807269 | 5.490399e-50 | -8.615850e-47 |
| Msa0185390 | Msa0695370 | 0.831712 | 1.428702e-55 | -8.615850e-47 |
| Msa0194570 | Msa0695370 | 0.829863 | 4.057718e-55 | -8.615850e-47 |
| Msa0200970 | Msa0695370 | 0.805447 | 1.329160e-49 | -8.615850e-47 |
| Msa0207000 | Msa0695370 | 0.801765 | 7.713941e-49 | -8.615850e-47 |
| Msa0207180 | Msa0695370 | 0.818111 | 2.324378e-52 | -8.615850e-47 |
| Msa0227490 | Msa0695370 | 0.807552 | 4.781308e-50 | -8.615850e-47 |
| Msa0227500 | Msa0695370 | 0.821119 | 4.782337e-53 | -8.615850e-47 |
| Msa0227510 | Msa0695370 | 0.804992 | 1.655238e-49 | -8.615850e-47 |
| Msa0230400 | Msa0695370 | 0.823301 | 1.490740e-53 | -8.615850e-47 |
| Msa0235890 | Msa0695370 | 0.808852 | 2.525972e-50 | -8.615850e-47 |
| Msa0380920 | Msa0695370 | 0.804886 | 1.741994e-49 | -8.615850e-47 |
| Msa0382560 | Msa0695370 | 0.800503 | 1.397615e-48 | -8.615850e-47 |
| Msa0420070 | Msa0695370 | 0.806129 | 9.555244e-50 | -8.615850e-47 |
| Msa0421800 | Msa0695370 | 0.801284 | 9.683520e-49 | -8.615850e-47 |
| Msa0274780 | Msa0695370 | 0.817876 | 2.626711e-52 | -8.615850e-47 |
| Msa0281570 | Msa0695370 | 0.830737 | 2.481957e-55 | -8.615850e-47 |
| Msa0284780 | Msa0695370 | 0.801516 | 8.679774e-49 | -8.615850e-47 |
| Msa0284870 | Msa0695370 | 0.801250 | 9.837755e-49 | -8.615850e-47 |
| Msa0291040 | Msa0695370 | 0.814163 | 1.771559e-51 | -8.615850e-47 |
| Msa0295520 | Msa0695370 | 0.800095 | 1.692783e-48 | -8.615850e-47 |
| Msa0301180 | Msa0695370 | 0.812144 | 4.915093e-51 | -8.615850e-47 |
| Msa0314790 | Msa0695370 | 0.803108 | 4.079367e-49 | -8.615850e-47 |
| Msa0315480 | Msa0695370 | 0.811576 | 6.534501e-51 | -8.615850e-47 |
| Msa0320540 | Msa0695370 | 0.819713 | 1.005357e-52 | -8.615850e-47 |
| Msa0331140 | Msa0695370 | 0.801455 | 8.931105e-49 | -8.615850e-47 |
| Msa0331780 | Msa0695370 | 0.828786 | 7.406394e-55 | -8.615850e-47 |
| Msa0344070 | Msa0695370 | 0.817895 | 2.601370e-52 | -8.615850e-47 |
| Msa0514260 | Msa0695370 | 0.800438 | 1.440985e-48 | -8.615850e-47 |
| Msa0524090 | Msa0695370 | 0.818107 | 2.329182e-52 | -8.615850e-47 |
| Msa0524120 | Msa0695370 | 0.826664 | 2.395802e-54 | -8.615850e-47 |
| Msa0525240 | Msa0695370 | 0.807352 | 5.270267e-50 | -8.615850e-47 |
| Msa0546380 | Msa0695370 | 0.801072 | 1.070055e-48 | -8.615850e-47 |
| Msa0557630 | Msa0695370 | 0.927680 | 8.382792e-92 | -8.615850e-47 |
| Msa0558890 | Msa0695370 | 0.815260 | 1.012528e-51 | -8.615850e-47 |
| Msa0574170 | Msa0695370 | 0.808531 | 2.958071e-50 | -8.615850e-47 |
| Msa0576420 | Msa0695370 | 0.815298 | 9.929892e-52 | -8.615850e-47 |
| Msa0581340 | Msa0695370 | 0.801292 | 9.644547e-49 | -8.615850e-47 |
| Msa0598250 | Msa0695370 | 0.817385 | 3.389880e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695370 | MtrunA17_Chr4g0046891 | 97.026 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695370 | AT4G26415.1 | 45.299 | 234 | 61 | 10 | 3 | 192 | 7 | 217 | 3.22e-44 | 153 |
Find 64 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCCTCAAGAACTCTT+TGG | 0.228130 | 4_4:-64883587 | Msa0695370:CDS |
| TCAATGAATATAGTGGAATA+AGG | 0.272127 | 4_4:-64883318 | Msa0695370:CDS |
| TGGTGTTGTGGCAAAGTTAA+TGG | 0.280238 | 4_4:-64883062 | Msa0695370:CDS |
| GCCATTTGAGAGGCATGATT+TGG | 0.298125 | 4_4:-64882942 | Msa0695370:CDS |
| TCCATGTATAGGTCATCTTT+TGG | 0.313265 | 4_4:-64883202 | Msa0695370:CDS |
| TCTTATGCCTTTCTTCATCT+TGG | 0.319608 | 4_4:+64883561 | None:intergenic |
| TTTCTCCTCAAGAACTCTTT+GGG | 0.349291 | 4_4:-64883586 | Msa0695370:CDS |
| AACCAACAAAATAGTACTAT+TGG | 0.366556 | 4_4:-64883502 | Msa0695370:CDS |
| TGGATATTGTATTATGAAAC+CGG | 0.367697 | 4_4:-64882837 | Msa0695370:CDS |
| GGATGAGTAGTGTTGATTGT+AGG | 0.385703 | 4_4:-64882985 | Msa0695370:CDS |
| CAATGAATATAGTGGAATAA+GGG | 0.392950 | 4_4:-64883317 | Msa0695370:CDS |
| AGAACCAAAGCTTGATGAAA+AGG | 0.407802 | 4_4:-64883137 | Msa0695370:CDS |
| GCCATAGCTTCTAGAGAAAC+CGG | 0.424661 | 4_4:+64882818 | None:intergenic |
| GGTGTTGTGGCAAAGTTAAT+GGG | 0.432813 | 4_4:-64883061 | Msa0695370:CDS |
| TGTGGCAAAGTTAATGGGTT+TGG | 0.433784 | 4_4:-64883056 | Msa0695370:CDS |
| TCTTATACTACAATTAGAAA+TGG | 0.443850 | 4_4:-64883368 | Msa0695370:CDS |
| GTTAGAAGAAGAAATAGGTC+TGG | 0.472977 | 4_4:-64882875 | Msa0695370:CDS |
| AGTATAAGATCTTCTAATGT+TGG | 0.477524 | 4_4:+64883382 | None:intergenic |
| TCCAAATCATGCCTCTCAAA+TGG | 0.478781 | 4_4:+64882941 | None:intergenic |
| TGCTGCTTGTGATGTCAACT+TGG | 0.485632 | 4_4:+64883458 | None:intergenic |
| AGTACTATTGGCAATGGCAT+TGG | 0.489373 | 4_4:-64883490 | Msa0695370:CDS |
| AAAACTAGCAATGGACATGC+AGG | 0.491726 | 4_4:-64882915 | Msa0695370:CDS |
| CCCAAAAGATGACCTATACA+TGG | 0.498041 | 4_4:+64883201 | None:intergenic |
| TTGTGATGTCAACTTGGCTA+TGG | 0.503039 | 4_4:+64883464 | None:intergenic |
| TTCTCCCCAGCAACTGTTGG+TGG | 0.503702 | 4_4:+64883103 | None:intergenic |
| GTAGGAGACAAAATATAAGA+AGG | 0.511223 | 4_4:-64882967 | Msa0695370:CDS |
| ATGGAAGAGATTCCATGTAT+AGG | 0.512387 | 4_4:-64883213 | Msa0695370:CDS |
| ATTAACTTTGCCACAACACC+AGG | 0.513967 | 4_4:+64883064 | None:intergenic |
| ACCGGTTTCTCTAGAAGCTA+TGG | 0.522607 | 4_4:-64882819 | Msa0695370:CDS |
| TTGCTGGGGAGAACGTGGTT+TGG | 0.527912 | 4_4:-64883093 | Msa0695370:CDS |
| ACATTGTTAGAAGAAGAAAT+AGG | 0.529346 | 4_4:-64882880 | Msa0695370:CDS |
| ATGCTTTGAATCAATATCCA+AGG | 0.531501 | 4_4:-64883246 | Msa0695370:CDS |
| AAATGGAGGAAGAGATGGCA+AGG | 0.533678 | 4_4:-64883351 | Msa0695370:CDS |
| ATTAGAAATGGAGGAAGAGA+TGG | 0.541356 | 4_4:-64883356 | Msa0695370:CDS |
| GAGTTCTTGAGGAGAAAGAA+TGG | 0.549925 | 4_4:+64883592 | None:intergenic |
| TTGGGAGCCAAGATGAAGAA+AGG | 0.561593 | 4_4:-64883568 | Msa0695370:CDS |
| CAAAATAGTACTATTGGCAA+TGG | 0.563916 | 4_4:-64883496 | Msa0695370:CDS |
| GAACGATGACAGCAAAGGAA+AGG | 0.574751 | 4_4:-64882208 | Msa0695370:CDS |
| CTTCCATCAAGTGAAAACCT+TGG | 0.575355 | 4_4:+64883229 | None:intergenic |
| GCGGTGACGAACAGCGAACA+AGG | 0.578778 | 4_4:-64882261 | Msa0695370:CDS |
| AATGAATATAGTGGAATAAG+GGG | 0.579962 | 4_4:-64883316 | Msa0695370:CDS |
| TATACTACAATTAGAAATGG+AGG | 0.596710 | 4_4:-64883365 | Msa0695370:CDS |
| TGGCTCCCAAAGAGTTCTTG+AGG | 0.597986 | 4_4:+64883581 | None:intergenic |
| GAAGCTATTCCAGTGTCAGT+AGG | 0.605402 | 4_4:-64883034 | Msa0695370:CDS |
| TTTGGAGAGAAAACTAGCAA+TGG | 0.605568 | 4_4:-64882924 | Msa0695370:CDS |
| AACGTGGTTTGGTGTAAACC+TGG | 0.608504 | 4_4:-64883082 | Msa0695370:CDS |
| GTTTCTCTAGAAGCTATGGC+AGG | 0.610709 | 4_4:-64882815 | Msa0695370:CDS |
| AACAGTTGCTGGGGAGAACG+TGG | 0.612915 | 4_4:-64883098 | Msa0695370:CDS |
| TCTACAGCAAAGTGATGGTG+AGG | 0.612930 | 4_4:-64882301 | Msa0695370:CDS |
| AATATAGTGGAATAAGGGGA+AGG | 0.620558 | 4_4:-64883312 | Msa0695370:CDS |
| CTACAGCAAAGTGATGGTGA+GGG | 0.621022 | 4_4:-64882300 | Msa0695370:CDS |
| GGAGACAAAATATAAGAAGG+AGG | 0.626425 | 4_4:-64882964 | Msa0695370:CDS |
| CTCACTCTACAGCAAAGTGA+TGG | 0.627026 | 4_4:-64882306 | Msa0695370:CDS |
| TAAGAAGGAGGCCATTTGAG+AGG | 0.627512 | 4_4:-64882952 | Msa0695370:CDS |
| AGCGAACAAGGACAAAGGAA+CGG | 0.630453 | 4_4:-64882249 | Msa0695370:CDS |
| CGAACAGCGAACAAGGACAA+AGG | 0.637121 | 4_4:-64882254 | Msa0695370:CDS |
| CTGACATATTAAGATCTGCA+AGG | 0.639107 | 4_4:-64883270 | Msa0695370:CDS |
| AGTTGACATCACAAGCAGCA+AGG | 0.656859 | 4_4:-64883455 | Msa0695370:CDS |
| TACAGCAAAGTGATGGTGAG+GGG | 0.657076 | 4_4:-64882299 | Msa0695370:CDS |
| ACGTTCTCCCCAGCAACTGT+TGG | 0.657823 | 4_4:+64883100 | None:intergenic |
| TCTCTAGAAGCTATGGCAGG+AGG | 0.665560 | 4_4:-64882812 | Msa0695370:intron |
| TTGGTGTAAACCTGGTGTTG+TGG | 0.669247 | 4_4:-64883074 | Msa0695370:CDS |
| AAACTAGCAATGGACATGCA+GGG | 0.676573 | 4_4:-64882914 | Msa0695370:CDS |
| ACGATGAACGATGACAGCAA+AGG | 0.686291 | 4_4:-64882213 | Msa0695370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTATAGTTTTAGATTTAA+TGG | + | chr4_4:64883296-64883315 | None:intergenic | 15.0% |
| !! | TTTATGGTAAAAAAAAATGA+AGG | - | chr4_4:64883355-64883374 | Msa0695370:CDS | 15.0% |
| !!! | GTTTATAGTTTTAGATTTAA+TGG | + | chr4_4:64883296-64883315 | None:intergenic | 15.0% |
| !! | TTTATGGTAAAAAAAAATGA+AGG | - | chr4_4:64883355-64883374 | Msa0695370:CDS | 15.0% |
| !! | TCTTATACTACAATTAGAAA+TGG | - | chr4_4:64882424-64882443 | Msa0695370:intron | 20.0% |
| !! | AGATATGTTTAGATTAGAAT+TGG | - | chr4_4:64883025-64883044 | Msa0695370:CDS | 20.0% |
| !!! | ATATAGATTTGTTTTTGTTC+AGG | + | chr4_4:64883242-64883261 | None:intergenic | 20.0% |
| !! | ATAAACAAAATACACCTTAA+AGG | - | chr4_4:64883310-64883329 | Msa0695370:CDS | 20.0% |
| !! | TCTTATACTACAATTAGAAA+TGG | - | chr4_4:64882424-64882443 | Msa0695370:intron | 20.0% |
| !! | AGATATGTTTAGATTAGAAT+TGG | - | chr4_4:64883025-64883044 | Msa0695370:CDS | 20.0% |
| !!! | ATATAGATTTGTTTTTGTTC+AGG | + | chr4_4:64883242-64883261 | None:intergenic | 20.0% |
| !! | ATAAACAAAATACACCTTAA+AGG | - | chr4_4:64883310-64883329 | Msa0695370:CDS | 20.0% |
| ! | AACCAACAAAATAGTACTAT+TGG | - | chr4_4:64882290-64882309 | Msa0695370:CDS | 25.0% |
| ! | AGTATAAGATCTTCTAATGT+TGG | + | chr4_4:64882413-64882432 | None:intergenic | 25.0% |
| ! | TATACTACAATTAGAAATGG+AGG | - | chr4_4:64882427-64882446 | Msa0695370:intron | 25.0% |
| ! | GAAAAACTCAATGAATATAG+TGG | - | chr4_4:64882467-64882486 | Msa0695370:intron | 25.0% |
| !! | TCAATGAATATAGTGGAATA+AGG | - | chr4_4:64882474-64882493 | Msa0695370:intron | 25.0% |
| !! | CAATGAATATAGTGGAATAA+GGG | - | chr4_4:64882475-64882494 | Msa0695370:intron | 25.0% |
| !! | AATGAATATAGTGGAATAAG+GGG | - | chr4_4:64882476-64882495 | Msa0695370:intron | 25.0% |
| ! | ACATTGTTAGAAGAAGAAAT+AGG | - | chr4_4:64882912-64882931 | Msa0695370:CDS | 25.0% |
| ! | TGGATATTGTATTATGAAAC+CGG | - | chr4_4:64882955-64882974 | Msa0695370:CDS | 25.0% |
| !!! | ATAGTTTTAGATTTAATGGC+AGG | + | chr4_4:64883292-64883311 | None:intergenic | 25.0% |
| ! | AAAATACACCTTAAAGGATT+TGG | - | chr4_4:64883316-64883335 | Msa0695370:CDS | 25.0% |
| ! | CTGTGGATATTATAGATTTA+TGG | - | chr4_4:64883339-64883358 | Msa0695370:CDS | 25.0% |
| ! | GTAAAAAAAAATGAAGGAAG+TGG | - | chr4_4:64883361-64883380 | Msa0695370:CDS | 25.0% |
| ! | AACCAACAAAATAGTACTAT+TGG | - | chr4_4:64882290-64882309 | Msa0695370:CDS | 25.0% |
| ! | AGTATAAGATCTTCTAATGT+TGG | + | chr4_4:64882413-64882432 | None:intergenic | 25.0% |
| ! | TATACTACAATTAGAAATGG+AGG | - | chr4_4:64882427-64882446 | Msa0695370:intron | 25.0% |
| ! | GAAAAACTCAATGAATATAG+TGG | - | chr4_4:64882467-64882486 | Msa0695370:intron | 25.0% |
| !! | TCAATGAATATAGTGGAATA+AGG | - | chr4_4:64882474-64882493 | Msa0695370:intron | 25.0% |
| !! | CAATGAATATAGTGGAATAA+GGG | - | chr4_4:64882475-64882494 | Msa0695370:intron | 25.0% |
| !! | AATGAATATAGTGGAATAAG+GGG | - | chr4_4:64882476-64882495 | Msa0695370:intron | 25.0% |
| ! | ACATTGTTAGAAGAAGAAAT+AGG | - | chr4_4:64882912-64882931 | Msa0695370:CDS | 25.0% |
| ! | TGGATATTGTATTATGAAAC+CGG | - | chr4_4:64882955-64882974 | Msa0695370:CDS | 25.0% |
| !!! | ATAGTTTTAGATTTAATGGC+AGG | + | chr4_4:64883292-64883311 | None:intergenic | 25.0% |
| ! | AAAATACACCTTAAAGGATT+TGG | - | chr4_4:64883316-64883335 | Msa0695370:CDS | 25.0% |
| ! | CTGTGGATATTATAGATTTA+TGG | - | chr4_4:64883339-64883358 | Msa0695370:CDS | 25.0% |
| ! | GTAAAAAAAAATGAAGGAAG+TGG | - | chr4_4:64883361-64883380 | Msa0695370:CDS | 25.0% |
| !!! | ATTTTGTTGGTTTAGAGTTG+AGG | + | chr4_4:64882282-64882301 | None:intergenic | 30.0% |
| ! | TGCCAATAGTACTATTTTGT+TGG | + | chr4_4:64882295-64882314 | None:intergenic | 30.0% |
| CAAAATAGTACTATTGGCAA+TGG | - | chr4_4:64882296-64882315 | Msa0695370:CDS | 30.0% | |
| AGTTGTCACATTGCAAAAAA+GGG | + | chr4_4:64882370-64882389 | None:intergenic | 30.0% | |
| ! | ATGCTTTGAATCAATATCCA+AGG | - | chr4_4:64882546-64882565 | Msa0695370:intron | 30.0% |
| ! | ATAACCTTTTCATCAAGCTT+TGG | + | chr4_4:64882662-64882681 | None:intergenic | 30.0% |
| AAAGATCTGACAAAAAAGAG+AGG | - | chr4_4:64882786-64882805 | Msa0695370:intron | 30.0% | |
| GTAGGAGACAAAATATAAGA+AGG | - | chr4_4:64882825-64882844 | Msa0695370:CDS | 30.0% | |
| !!! | TCTGGTTTTTGCTCTAAAAA+TGG | - | chr4_4:64882935-64882954 | Msa0695370:CDS | 30.0% |
| CTAATCTAAACATATCTCCT+TGG | + | chr4_4:64883022-64883041 | None:intergenic | 30.0% | |
| ACATATAGCAATGCTCAAAA+TGG | + | chr4_4:64883161-64883180 | None:intergenic | 30.0% | |
| !!! | ATTTTGTTGGTTTAGAGTTG+AGG | + | chr4_4:64882282-64882301 | None:intergenic | 30.0% |
| ! | TGCCAATAGTACTATTTTGT+TGG | + | chr4_4:64882295-64882314 | None:intergenic | 30.0% |
| CAAAATAGTACTATTGGCAA+TGG | - | chr4_4:64882296-64882315 | Msa0695370:CDS | 30.0% | |
| AGTTGTCACATTGCAAAAAA+GGG | + | chr4_4:64882370-64882389 | None:intergenic | 30.0% | |
| ! | ATGCTTTGAATCAATATCCA+AGG | - | chr4_4:64882546-64882565 | Msa0695370:intron | 30.0% |
| ! | ATAACCTTTTCATCAAGCTT+TGG | + | chr4_4:64882662-64882681 | None:intergenic | 30.0% |
| AAAGATCTGACAAAAAAGAG+AGG | - | chr4_4:64882786-64882805 | Msa0695370:intron | 30.0% | |
| GTAGGAGACAAAATATAAGA+AGG | - | chr4_4:64882825-64882844 | Msa0695370:CDS | 30.0% | |
| !!! | TCTGGTTTTTGCTCTAAAAA+TGG | - | chr4_4:64882935-64882954 | Msa0695370:CDS | 30.0% |
| CTAATCTAAACATATCTCCT+TGG | + | chr4_4:64883022-64883041 | None:intergenic | 30.0% | |
| ACATATAGCAATGCTCAAAA+TGG | + | chr4_4:64883161-64883180 | None:intergenic | 30.0% | |
| TTTCTCCTCAAGAACTCTTT+GGG | - | chr4_4:64882206-64882225 | Msa0695370:CDS | 35.0% | |
| TCTTATGCCTTTCTTCATCT+TGG | + | chr4_4:64882234-64882253 | None:intergenic | 35.0% | |
| GTTGTCACATTGCAAAAAAG+GGG | + | chr4_4:64882369-64882388 | None:intergenic | 35.0% | |
| GAGTTGTCACATTGCAAAAA+AGG | + | chr4_4:64882371-64882390 | None:intergenic | 35.0% | |
| ATTAGAAATGGAGGAAGAGA+TGG | - | chr4_4:64882436-64882455 | Msa0695370:intron | 35.0% | |
| ! | AATATAGTGGAATAAGGGGA+AGG | - | chr4_4:64882480-64882499 | Msa0695370:intron | 35.0% |
| CTGACATATTAAGATCTGCA+AGG | - | chr4_4:64882522-64882541 | Msa0695370:intron | 35.0% | |
| ! | TATCCAAGGTTTTCACTTGA+TGG | - | chr4_4:64882560-64882579 | Msa0695370:intron | 35.0% |
| ATGGAAGAGATTCCATGTAT+AGG | - | chr4_4:64882579-64882598 | Msa0695370:intron | 35.0% | |
| ! | TCCATGTATAGGTCATCTTT+TGG | - | chr4_4:64882590-64882609 | Msa0695370:intron | 35.0% |
| ! | CCATGTATAGGTCATCTTTT+GGG | - | chr4_4:64882591-64882610 | Msa0695370:intron | 35.0% |
| !!! | TCATCTTTTGGGACTATAGA+AGG | - | chr4_4:64882602-64882621 | Msa0695370:intron | 35.0% |
| AGAACCAAAGCTTGATGAAA+AGG | - | chr4_4:64882655-64882674 | Msa0695370:intron | 35.0% | |
| GGAGACAAAATATAAGAAGG+AGG | - | chr4_4:64882828-64882847 | Msa0695370:CDS | 35.0% | |
| TTTGGAGAGAAAACTAGCAA+TGG | - | chr4_4:64882868-64882887 | Msa0695370:CDS | 35.0% | |
| GTTAGAAGAAGAAATAGGTC+TGG | - | chr4_4:64882917-64882936 | Msa0695370:CDS | 35.0% | |
| !! | ATGTGATTATTAGCCTTGTG+AGG | + | chr4_4:64883124-64883143 | None:intergenic | 35.0% |
| TAGCAATGCTCAAAATGGAA+TGG | + | chr4_4:64883156-64883175 | None:intergenic | 35.0% | |
| TTAGATTTAATGGCAGGACA+TGG | + | chr4_4:64883286-64883305 | None:intergenic | 35.0% | |
| ! | AAGTGGAGACTTTTAGTCAA+TGG | - | chr4_4:64883378-64883397 | Msa0695370:CDS | 35.0% |
| ! | AGTGGAGACTTTTAGTCAAT+GGG | - | chr4_4:64883379-64883398 | Msa0695370:CDS | 35.0% |
| GTATCTGAATTTGACTCAGT+TGG | + | chr4_4:64883405-64883424 | None:intergenic | 35.0% | |
| AAATAGACACTTGGTTCCAT+CGG | + | chr4_4:64883439-64883458 | None:intergenic | 35.0% | |
| TTTCTCCTCAAGAACTCTTT+GGG | - | chr4_4:64882206-64882225 | Msa0695370:CDS | 35.0% | |
| TCTTATGCCTTTCTTCATCT+TGG | + | chr4_4:64882234-64882253 | None:intergenic | 35.0% | |
| GTTGTCACATTGCAAAAAAG+GGG | + | chr4_4:64882369-64882388 | None:intergenic | 35.0% | |
| GAGTTGTCACATTGCAAAAA+AGG | + | chr4_4:64882371-64882390 | None:intergenic | 35.0% | |
| ATTAGAAATGGAGGAAGAGA+TGG | - | chr4_4:64882436-64882455 | Msa0695370:intron | 35.0% | |
| ! | AATATAGTGGAATAAGGGGA+AGG | - | chr4_4:64882480-64882499 | Msa0695370:intron | 35.0% |
| CTGACATATTAAGATCTGCA+AGG | - | chr4_4:64882522-64882541 | Msa0695370:intron | 35.0% | |
| ! | TATCCAAGGTTTTCACTTGA+TGG | - | chr4_4:64882560-64882579 | Msa0695370:intron | 35.0% |
| ATGGAAGAGATTCCATGTAT+AGG | - | chr4_4:64882579-64882598 | Msa0695370:intron | 35.0% | |
| ! | TCCATGTATAGGTCATCTTT+TGG | - | chr4_4:64882590-64882609 | Msa0695370:intron | 35.0% |
| ! | CCATGTATAGGTCATCTTTT+GGG | - | chr4_4:64882591-64882610 | Msa0695370:intron | 35.0% |
| !!! | TCATCTTTTGGGACTATAGA+AGG | - | chr4_4:64882602-64882621 | Msa0695370:intron | 35.0% |
| AGAACCAAAGCTTGATGAAA+AGG | - | chr4_4:64882655-64882674 | Msa0695370:intron | 35.0% | |
| GGAGACAAAATATAAGAAGG+AGG | - | chr4_4:64882828-64882847 | Msa0695370:CDS | 35.0% | |
| TTTGGAGAGAAAACTAGCAA+TGG | - | chr4_4:64882868-64882887 | Msa0695370:CDS | 35.0% | |
| GTTAGAAGAAGAAATAGGTC+TGG | - | chr4_4:64882917-64882936 | Msa0695370:CDS | 35.0% | |
| !! | ATGTGATTATTAGCCTTGTG+AGG | + | chr4_4:64883124-64883143 | None:intergenic | 35.0% |
| TAGCAATGCTCAAAATGGAA+TGG | + | chr4_4:64883156-64883175 | None:intergenic | 35.0% | |
| TTAGATTTAATGGCAGGACA+TGG | + | chr4_4:64883286-64883305 | None:intergenic | 35.0% | |
| ! | AAGTGGAGACTTTTAGTCAA+TGG | - | chr4_4:64883378-64883397 | Msa0695370:CDS | 35.0% |
| ! | AGTGGAGACTTTTAGTCAAT+GGG | - | chr4_4:64883379-64883398 | Msa0695370:CDS | 35.0% |
| GTATCTGAATTTGACTCAGT+TGG | + | chr4_4:64883405-64883424 | None:intergenic | 35.0% | |
| AAATAGACACTTGGTTCCAT+CGG | + | chr4_4:64883439-64883458 | None:intergenic | 35.0% | |
| GAGTTCTTGAGGAGAAAGAA+TGG | + | chr4_4:64882203-64882222 | None:intergenic | 40.0% | |
| CTTTCTCCTCAAGAACTCTT+TGG | - | chr4_4:64882205-64882224 | Msa0695370:CDS | 40.0% | |
| AGTACTATTGGCAATGGCAT+TGG | - | chr4_4:64882302-64882321 | Msa0695370:CDS | 40.0% | |
| TTGTGATGTCAACTTGGCTA+TGG | + | chr4_4:64882331-64882350 | None:intergenic | 40.0% | |
| CTTCCATCAAGTGAAAACCT+TGG | + | chr4_4:64882566-64882585 | None:intergenic | 40.0% | |
| CCCAAAAGATGACCTATACA+TGG | + | chr4_4:64882594-64882613 | None:intergenic | 40.0% | |
| ATTAACTTTGCCACAACACC+AGG | + | chr4_4:64882731-64882750 | None:intergenic | 40.0% | |
| !! | TGGTGTTGTGGCAAAGTTAA+TGG | - | chr4_4:64882730-64882749 | Msa0695370:intron | 40.0% |
| ! | GGTGTTGTGGCAAAGTTAAT+GGG | - | chr4_4:64882731-64882750 | Msa0695370:intron | 40.0% |
| !! | TGTGGCAAAGTTAATGGGTT+TGG | - | chr4_4:64882736-64882755 | Msa0695370:intron | 40.0% |
| ! | CTTTTTCTACCTACTGACAC+TGG | + | chr4_4:64882770-64882789 | None:intergenic | 40.0% |
| !! | GGATGAGTAGTGTTGATTGT+AGG | - | chr4_4:64882807-64882826 | Msa0695370:intron | 40.0% |
| TCCAAATCATGCCTCTCAAA+TGG | + | chr4_4:64882854-64882873 | None:intergenic | 40.0% | |
| AAAACTAGCAATGGACATGC+AGG | - | chr4_4:64882877-64882896 | Msa0695370:CDS | 40.0% | |
| AAACTAGCAATGGACATGCA+GGG | - | chr4_4:64882878-64882897 | Msa0695370:CDS | 40.0% | |
| AATGCATGTAATGCCTCACA+AGG | - | chr4_4:64883108-64883127 | Msa0695370:CDS | 40.0% | |
| !!! | TTTGTTTTTGTTCAGGCAGC+AGG | + | chr4_4:64883235-64883254 | None:intergenic | 40.0% |
| ATCCACAGCCAAATCCTTTA+AGG | + | chr4_4:64883327-64883346 | None:intergenic | 40.0% | |
| GATACATATAGTGCAACCGA+TGG | - | chr4_4:64883420-64883439 | Msa0695370:CDS | 40.0% | |
| GAACCAAGTGTCTATTTCGA+TGG | - | chr4_4:64883442-64883461 | Msa0695370:CDS | 40.0% | |
| !! | TGTCTATTTCGATGGTGGAT+AGG | - | chr4_4:64883450-64883469 | Msa0695370:CDS | 40.0% |
| GAGTTCTTGAGGAGAAAGAA+TGG | + | chr4_4:64882203-64882222 | None:intergenic | 40.0% | |
| CTTTCTCCTCAAGAACTCTT+TGG | - | chr4_4:64882205-64882224 | Msa0695370:CDS | 40.0% | |
| AGTACTATTGGCAATGGCAT+TGG | - | chr4_4:64882302-64882321 | Msa0695370:CDS | 40.0% | |
| TTGTGATGTCAACTTGGCTA+TGG | + | chr4_4:64882331-64882350 | None:intergenic | 40.0% | |
| CTTCCATCAAGTGAAAACCT+TGG | + | chr4_4:64882566-64882585 | None:intergenic | 40.0% | |
| CCCAAAAGATGACCTATACA+TGG | + | chr4_4:64882594-64882613 | None:intergenic | 40.0% | |
| ATTAACTTTGCCACAACACC+AGG | + | chr4_4:64882731-64882750 | None:intergenic | 40.0% | |
| !! | TGGTGTTGTGGCAAAGTTAA+TGG | - | chr4_4:64882730-64882749 | Msa0695370:intron | 40.0% |
| ! | GGTGTTGTGGCAAAGTTAAT+GGG | - | chr4_4:64882731-64882750 | Msa0695370:intron | 40.0% |
| !! | TGTGGCAAAGTTAATGGGTT+TGG | - | chr4_4:64882736-64882755 | Msa0695370:intron | 40.0% |
| ! | CTTTTTCTACCTACTGACAC+TGG | + | chr4_4:64882770-64882789 | None:intergenic | 40.0% |
| !! | GGATGAGTAGTGTTGATTGT+AGG | - | chr4_4:64882807-64882826 | Msa0695370:intron | 40.0% |
| TCCAAATCATGCCTCTCAAA+TGG | + | chr4_4:64882854-64882873 | None:intergenic | 40.0% | |
| AAAACTAGCAATGGACATGC+AGG | - | chr4_4:64882877-64882896 | Msa0695370:CDS | 40.0% | |
| AAACTAGCAATGGACATGCA+GGG | - | chr4_4:64882878-64882897 | Msa0695370:CDS | 40.0% | |
| AATGCATGTAATGCCTCACA+AGG | - | chr4_4:64883108-64883127 | Msa0695370:CDS | 40.0% | |
| !!! | TTTGTTTTTGTTCAGGCAGC+AGG | + | chr4_4:64883235-64883254 | None:intergenic | 40.0% |
| ATCCACAGCCAAATCCTTTA+AGG | + | chr4_4:64883327-64883346 | None:intergenic | 40.0% | |
| GATACATATAGTGCAACCGA+TGG | - | chr4_4:64883420-64883439 | Msa0695370:CDS | 40.0% | |
| GAACCAAGTGTCTATTTCGA+TGG | - | chr4_4:64883442-64883461 | Msa0695370:CDS | 40.0% | |
| !! | TGTCTATTTCGATGGTGGAT+AGG | - | chr4_4:64883450-64883469 | Msa0695370:CDS | 40.0% |
| TTGGGAGCCAAGATGAAGAA+AGG | - | chr4_4:64882224-64882243 | Msa0695370:CDS | 45.0% | |
| ! | TGCTGCTTGTGATGTCAACT+TGG | + | chr4_4:64882337-64882356 | None:intergenic | 45.0% |
| AGTTGACATCACAAGCAGCA+AGG | - | chr4_4:64882337-64882356 | Msa0695370:intron | 45.0% | |
| AAATGGAGGAAGAGATGGCA+AGG | - | chr4_4:64882441-64882460 | Msa0695370:intron | 45.0% | |
| ! | TGTTTTCCACCAACAGTTGC+TGG | - | chr4_4:64882683-64882702 | Msa0695370:intron | 45.0% |
| ! | GTTTTCCACCAACAGTTGCT+GGG | - | chr4_4:64882684-64882703 | Msa0695370:intron | 45.0% |
| ! | TTTTCCACCAACAGTTGCTG+GGG | - | chr4_4:64882685-64882704 | Msa0695370:intron | 45.0% |
| !! | AACGTGGTTTGGTGTAAACC+TGG | - | chr4_4:64882710-64882729 | Msa0695370:intron | 45.0% |
| ! | TTGGTGTAAACCTGGTGTTG+TGG | - | chr4_4:64882718-64882737 | Msa0695370:intron | 45.0% |
| GAAGCTATTCCAGTGTCAGT+AGG | - | chr4_4:64882758-64882777 | Msa0695370:intron | 45.0% | |
| TAAGAAGGAGGCCATTTGAG+AGG | - | chr4_4:64882840-64882859 | Msa0695370:CDS | 45.0% | |
| ! | GCCATTTGAGAGGCATGATT+TGG | - | chr4_4:64882850-64882869 | Msa0695370:CDS | 45.0% |
| ! | ACCGGTTTCTCTAGAAGCTA+TGG | - | chr4_4:64882973-64882992 | Msa0695370:CDS | 45.0% |
| ! | GCCATAGCTTCTAGAGAAAC+CGG | + | chr4_4:64882977-64882996 | None:intergenic | 45.0% |
| ! | GTTTCTCTAGAAGCTATGGC+AGG | - | chr4_4:64882977-64882996 | Msa0695370:CDS | 45.0% |
| ATGGAGAAAAGCTGAGTGCA+TGG | + | chr4_4:64883267-64883286 | None:intergenic | 45.0% | |
| CACCTTAAAGGATTTGGCTG+TGG | - | chr4_4:64883322-64883341 | Msa0695370:CDS | 45.0% | |
| CCACCATCGAAATAGACACT+TGG | + | chr4_4:64883448-64883467 | None:intergenic | 45.0% | |
| CCAAGTGTCTATTTCGATGG+TGG | - | chr4_4:64883445-64883464 | Msa0695370:CDS | 45.0% | |
| CTCACTCTACAGCAAAGTGA+TGG | - | chr4_4:64883486-64883505 | Msa0695370:CDS | 45.0% | |
| ! | TCTACAGCAAAGTGATGGTG+AGG | - | chr4_4:64883491-64883510 | Msa0695370:CDS | 45.0% |
| ! | CTACAGCAAAGTGATGGTGA+GGG | - | chr4_4:64883492-64883511 | Msa0695370:CDS | 45.0% |
| ! | TACAGCAAAGTGATGGTGAG+GGG | - | chr4_4:64883493-64883512 | Msa0695370:CDS | 45.0% |
| !! | TGAGGGGTTTTGTGATGGAA+TGG | - | chr4_4:64883509-64883528 | Msa0695370:CDS | 45.0% |
| AGCGAACAAGGACAAAGGAA+CGG | - | chr4_4:64883543-64883562 | Msa0695370:CDS | 45.0% | |
| ACGATGAACGATGACAGCAA+AGG | - | chr4_4:64883579-64883598 | Msa0695370:CDS | 45.0% | |
| GAACGATGACAGCAAAGGAA+AGG | - | chr4_4:64883584-64883603 | Msa0695370:CDS | 45.0% | |
| TTGGGAGCCAAGATGAAGAA+AGG | - | chr4_4:64882224-64882243 | Msa0695370:CDS | 45.0% | |
| ! | TGCTGCTTGTGATGTCAACT+TGG | + | chr4_4:64882337-64882356 | None:intergenic | 45.0% |
| AGTTGACATCACAAGCAGCA+AGG | - | chr4_4:64882337-64882356 | Msa0695370:intron | 45.0% | |
| AAATGGAGGAAGAGATGGCA+AGG | - | chr4_4:64882441-64882460 | Msa0695370:intron | 45.0% | |
| ! | TGTTTTCCACCAACAGTTGC+TGG | - | chr4_4:64882683-64882702 | Msa0695370:intron | 45.0% |
| ! | GTTTTCCACCAACAGTTGCT+GGG | - | chr4_4:64882684-64882703 | Msa0695370:intron | 45.0% |
| ! | TTTTCCACCAACAGTTGCTG+GGG | - | chr4_4:64882685-64882704 | Msa0695370:intron | 45.0% |
| !! | AACGTGGTTTGGTGTAAACC+TGG | - | chr4_4:64882710-64882729 | Msa0695370:intron | 45.0% |
| ! | TTGGTGTAAACCTGGTGTTG+TGG | - | chr4_4:64882718-64882737 | Msa0695370:intron | 45.0% |
| GAAGCTATTCCAGTGTCAGT+AGG | - | chr4_4:64882758-64882777 | Msa0695370:intron | 45.0% | |
| TAAGAAGGAGGCCATTTGAG+AGG | - | chr4_4:64882840-64882859 | Msa0695370:CDS | 45.0% | |
| ! | GCCATTTGAGAGGCATGATT+TGG | - | chr4_4:64882850-64882869 | Msa0695370:CDS | 45.0% |
| ! | ACCGGTTTCTCTAGAAGCTA+TGG | - | chr4_4:64882973-64882992 | Msa0695370:CDS | 45.0% |
| ! | GCCATAGCTTCTAGAGAAAC+CGG | + | chr4_4:64882977-64882996 | None:intergenic | 45.0% |
| ! | GTTTCTCTAGAAGCTATGGC+AGG | - | chr4_4:64882977-64882996 | Msa0695370:CDS | 45.0% |
| ATGGAGAAAAGCTGAGTGCA+TGG | + | chr4_4:64883267-64883286 | None:intergenic | 45.0% | |
| CACCTTAAAGGATTTGGCTG+TGG | - | chr4_4:64883322-64883341 | Msa0695370:CDS | 45.0% | |
| CCACCATCGAAATAGACACT+TGG | + | chr4_4:64883448-64883467 | None:intergenic | 45.0% | |
| CCAAGTGTCTATTTCGATGG+TGG | - | chr4_4:64883445-64883464 | Msa0695370:CDS | 45.0% | |
| CTCACTCTACAGCAAAGTGA+TGG | - | chr4_4:64883486-64883505 | Msa0695370:CDS | 45.0% | |
| ! | TCTACAGCAAAGTGATGGTG+AGG | - | chr4_4:64883491-64883510 | Msa0695370:CDS | 45.0% |
| ! | CTACAGCAAAGTGATGGTGA+GGG | - | chr4_4:64883492-64883511 | Msa0695370:CDS | 45.0% |
| ! | TACAGCAAAGTGATGGTGAG+GGG | - | chr4_4:64883493-64883512 | Msa0695370:CDS | 45.0% |
| !! | TGAGGGGTTTTGTGATGGAA+TGG | - | chr4_4:64883509-64883528 | Msa0695370:CDS | 45.0% |
| AGCGAACAAGGACAAAGGAA+CGG | - | chr4_4:64883543-64883562 | Msa0695370:CDS | 45.0% | |
| ACGATGAACGATGACAGCAA+AGG | - | chr4_4:64883579-64883598 | Msa0695370:CDS | 45.0% | |
| GAACGATGACAGCAAAGGAA+AGG | - | chr4_4:64883584-64883603 | Msa0695370:CDS | 45.0% | |
| TGGCTCCCAAAGAGTTCTTG+AGG | + | chr4_4:64882214-64882233 | None:intergenic | 50.0% | |
| ! | TCTCTAGAAGCTATGGCAGG+AGG | - | chr4_4:64882980-64882999 | Msa0695370:CDS | 50.0% |
| GTCCTAGTAGTTGGCAACCA+AGG | - | chr4_4:64883002-64883021 | Msa0695370:CDS | 50.0% | |
| CTCCTTGGTTGCCAACTACT+AGG | + | chr4_4:64883007-64883026 | None:intergenic | 50.0% | |
| !! | GATGGTGAGGGGTTTTGTGA+TGG | - | chr4_4:64883504-64883523 | Msa0695370:CDS | 50.0% |
| !! | GGGGTTTTGTGATGGAATGG+CGG | - | chr4_4:64883512-64883531 | Msa0695370:CDS | 50.0% |
| CGAACAGCGAACAAGGACAA+AGG | - | chr4_4:64883538-64883557 | Msa0695370:CDS | 50.0% | |
| TGGCTCCCAAAGAGTTCTTG+AGG | + | chr4_4:64882214-64882233 | None:intergenic | 50.0% | |
| ! | TCTCTAGAAGCTATGGCAGG+AGG | - | chr4_4:64882980-64882999 | Msa0695370:CDS | 50.0% |
| GTCCTAGTAGTTGGCAACCA+AGG | - | chr4_4:64883002-64883021 | Msa0695370:CDS | 50.0% | |
| CTCCTTGGTTGCCAACTACT+AGG | + | chr4_4:64883007-64883026 | None:intergenic | 50.0% | |
| !! | GATGGTGAGGGGTTTTGTGA+TGG | - | chr4_4:64883504-64883523 | Msa0695370:CDS | 50.0% |
| !! | GGGGTTTTGTGATGGAATGG+CGG | - | chr4_4:64883512-64883531 | Msa0695370:CDS | 50.0% |
| CGAACAGCGAACAAGGACAA+AGG | - | chr4_4:64883538-64883557 | Msa0695370:CDS | 50.0% | |
| TTCTCCCCAGCAACTGTTGG+TGG | + | chr4_4:64882692-64882711 | None:intergenic | 55.0% | |
| ACGTTCTCCCCAGCAACTGT+TGG | + | chr4_4:64882695-64882714 | None:intergenic | 55.0% | |
| AACAGTTGCTGGGGAGAACG+TGG | - | chr4_4:64882694-64882713 | Msa0695370:intron | 55.0% | |
| TTGCTGGGGAGAACGTGGTT+TGG | - | chr4_4:64882699-64882718 | Msa0695370:intron | 55.0% | |
| TGGCAGGAGGTCCTAGTAGT+TGG | - | chr4_4:64882993-64883012 | Msa0695370:CDS | 55.0% | |
| TTCTCCCCAGCAACTGTTGG+TGG | + | chr4_4:64882692-64882711 | None:intergenic | 55.0% | |
| ACGTTCTCCCCAGCAACTGT+TGG | + | chr4_4:64882695-64882714 | None:intergenic | 55.0% | |
| AACAGTTGCTGGGGAGAACG+TGG | - | chr4_4:64882694-64882713 | Msa0695370:intron | 55.0% | |
| TTGCTGGGGAGAACGTGGTT+TGG | - | chr4_4:64882699-64882718 | Msa0695370:intron | 55.0% | |
| TGGCAGGAGGTCCTAGTAGT+TGG | - | chr4_4:64882993-64883012 | Msa0695370:CDS | 55.0% | |
| GCGGTGACGAACAGCGAACA+AGG | - | chr4_4:64883531-64883550 | Msa0695370:CDS | 60.0% | |
| GCGGTGACGAACAGCGAACA+AGG | - | chr4_4:64883531-64883550 | Msa0695370:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 64882197 | 64883617 | 64882197 | ID=Msa0695370;Name=Msa0695370 |
| chr4_4 | mRNA | 64882197 | 64883617 | 64882197 | ID=Msa0695370-mRNA-1;Parent=Msa0695370;Name=Msa0695370-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.5|1|1|2|0|316 |
| chr4_4 | exon | 64882813 | 64883617 | 64882813 | ID=Msa0695370-mRNA-1:exon:18645;Parent=Msa0695370-mRNA-1 |
| chr4_4 | exon | 64882197 | 64882342 | 64882197 | ID=Msa0695370-mRNA-1:exon:18644;Parent=Msa0695370-mRNA-1 |
| chr4_4 | CDS | 64882813 | 64883617 | 64882813 | ID=Msa0695370-mRNA-1:cds;Parent=Msa0695370-mRNA-1 |
| chr4_4 | CDS | 64882197 | 64882342 | 64882197 | ID=Msa0695370-mRNA-1:cds;Parent=Msa0695370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
