AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0621770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621770 MtrunA17_Chr2g0322221 90.047 211 2 2 1 208 1 195 3.12e-138 384
Msa0621770 MtrunA17_Chr4g0025361 63.592 206 46 7 3 208 1 177 2.46e-72 217
Msa0621770 MtrunA17_Chr4g0063931 54.011 187 65 3 9 195 11 176 1.28e-58 182
Msa0621770 MtrunA17_Chr4g0011841 46.977 215 66 8 14 208 25 211 5.39e-47 154
Msa0621770 MtrunA17_Chr4g0056521 44.344 221 69 7 12 208 18 208 2.69e-45 149
Msa0621770 MtrunA17_Chr5g0413381 47.429 175 59 4 12 177 12 162 1.77e-43 144
Msa0621770 MtrunA17_Chr5g0419871 40.449 178 75 5 1 176 7 155 2.31e-32 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621770 AT1G08465.1 57.075 212 59 7 1 208 1 184 7.21e-72 216
Msa0621770 AT2G26580.2 56.477 193 52 7 3 193 1 163 8.07e-58 180
Msa0621770 AT2G26580.1 56.477 193 52 7 3 193 1 163 8.07e-58 180
Msa0621770 AT2G45190.1 46.479 213 80 6 12 208 23 217 1.01e-49 161
Msa0621770 AT4G00180.1 44.298 228 81 6 9 208 20 229 6.31e-45 149
Msa0621770 AT4G00180.2 46.465 198 76 5 39 208 3 198 9.77e-40 135
Msa0621770 AT2G45190.2 69.565 92 24 3 121 208 62 153 9.63e-37 126
Msa0621770 AT1G23420.1 40.957 188 64 5 13 180 20 180 4.44e-35 124
Msa0621770 AT1G23420.2 40.957 188 64 5 13 180 51 211 1.36e-34 124
Msa0621770 AT1G69180.1 39.645 169 67 4 12 176 19 156 6.95e-29 106

Find 73 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATTGATACACATAAAA+TGG 0.222387 4_2:+74014719 Msa0621770:exon
CGACGAATTGGAGGAGTTCT+AGG 0.259388 4_2:-74010959 None:intergenic
AATCACAATAAAATCATTAT+AGG 0.286499 4_2:-74014909 None:intergenic
TCAAAGAATCTGTCATTAAT+AGG 0.305950 4_2:-74010415 None:intergenic
GCTTCCCTGTGACTGATATC+TGG 0.320339 4_2:-74013749 None:intergenic
CAAAGTTGGACCATGGGGTT+GGG 0.322720 4_2:+74014672 Msa0621770:CDS
GTAAAATTAATTATTATAAG+TGG 0.347625 4_2:-74008515 None:intergenic
GGAGGAAATACAAAGAATTA+AGG 0.364362 4_2:+74013718 Msa0621770:CDS
CATTCACTTTGGGTTAAAGT+TGG 0.389082 4_2:+74014634 Msa0621770:CDS
GTGTTCCTTCTGCTTATAAT+CGG 0.399754 4_2:+74012853 Msa0621770:CDS
TATTAATGACAGATTCTTTG+AGG 0.415658 4_2:+74010417 Msa0621770:CDS
AAAACAAGATATTAATAAGT+AGG 0.445391 4_2:-74008538 None:intergenic
GGAACACGTTGTCTCTTCTC+TGG 0.447042 4_2:-74012837 None:intergenic
TAAAATTAATTATTATAAGT+GGG 0.450249 4_2:-74008514 None:intergenic
TTAACTATTATGTTGAACTT+AGG 0.452739 4_2:+74014935 Msa0621770:three_prime_UTR
AATAAAATCATTATAGGAAA+GGG 0.456164 4_2:-74014903 None:intergenic
GAGTGAGACTCACGACGAAT+TGG 0.463921 4_2:-74010971 None:intergenic
TTAAACAAGGTGAGGGGAAG+AGG 0.466176 4_2:-74014859 None:intergenic
TCCCATTCACATTATTGCAT+GGG 0.466920 4_2:+74014817 Msa0621770:three_prime_UTR
TCCCCATGCAATAATGTGAA+TGG 0.467250 4_2:-74014819 None:intergenic
GCAAAGTTGGACCATGGGGT+TGG 0.469067 4_2:+74014671 Msa0621770:CDS
AGAAGAGAGTGGGTGTAGTG+TGG 0.476783 4_2:-74008401 None:intergenic
CCCCATGCAATAATGTGAAT+GGG 0.480101 4_2:-74014818 None:intergenic
TAATTTGCTTTCTGTTAACA+TGG 0.488657 4_2:+74010587 Msa0621770:CDS
AAACAAGATATTAATAAGTA+GGG 0.497233 4_2:-74008537 None:intergenic
CTAGGTTGCTCATGGACTAA+AGG 0.498311 4_2:-74010941 None:intergenic
GAAGAGAGTGGGTGTAGTGT+GGG 0.499825 4_2:-74008400 None:intergenic
GAGGAGTTCTAGGTTGCTCA+TGG 0.501712 4_2:-74010949 None:intergenic
CACTTTGGGTTAAAGTTGGA+TGG 0.502249 4_2:+74014638 Msa0621770:CDS
AAAATTGTGAATGGTTAGGA+TGG 0.505764 4_2:-74008578 None:intergenic
TTCCCATTCACATTATTGCA+TGG 0.506840 4_2:+74014816 Msa0621770:three_prime_UTR
AAAGTTGGACCATGGGGTTG+GGG 0.506917 4_2:+74014673 Msa0621770:CDS
GAAAGCAGGAAGGAAGTTGT+AGG 0.512942 4_2:+74010878 Msa0621770:CDS
CTATATAATTATCGATCAGT+TGG 0.513589 4_2:+74014750 Msa0621770:three_prime_UTR
AGCAAGCAAAGTTGGACCAT+GGG 0.525967 4_2:+74014666 Msa0621770:CDS
AGGATGGGACTAGACTGGTC+GGG 0.530217 4_2:-74008562 None:intergenic
TGGTAGCAAGCAAGCAAAGT+TGG 0.534431 4_2:+74014658 Msa0621770:CDS
CAATAAAATCATTATAGGAA+AGG 0.538888 4_2:-74014904 None:intergenic
GAGTAGCTTCCCCAACCCCA+TGG 0.548405 4_2:-74014682 None:intergenic
ACTGTCATCAAGAAGAAAGC+AGG 0.549205 4_2:+74010864 Msa0621770:CDS
GTACAAAATTGTGAATGGTT+AGG 0.550311 4_2:-74008582 None:intergenic
GTCAATGGATATGAATATGA+TGG 0.554037 4_2:+74008852 Msa0621770:CDS
CCCATTCACATTATTGCATG+GGG 0.555248 4_2:+74014818 Msa0621770:three_prime_UTR
TGAGACTCACGACGAATTGG+AGG 0.556210 4_2:-74010968 None:intergenic
GTAATCCAGATATCAGTCAC+AGG 0.560520 4_2:+74013744 Msa0621770:CDS
ACTATTACTTAAACAAGGTG+AGG 0.570487 4_2:-74014867 None:intergenic
AATTTGCTTTCTGTTAACAT+GGG 0.574518 4_2:+74010588 Msa0621770:CDS
TGGTTAGGATGGGACTAGAC+TGG 0.575256 4_2:-74008567 None:intergenic
AAGAATCTGTCATTAATAGG+AGG 0.579774 4_2:-74010412 None:intergenic
TCCTCAACAAGATCACCCTC+AGG 0.589143 4_2:+74010635 Msa0621770:CDS
CTATTACTTAAACAAGGTGA+GGG 0.592239 4_2:-74014866 None:intergenic
GATGTGTACAAAATTGTGAA+TGG 0.592715 4_2:-74008587 None:intergenic
GGATGGGACTAGACTGGTCG+GGG 0.594813 4_2:-74008561 None:intergenic
ATGAACCGATTATAAGCAGA+AGG 0.594934 4_2:-74012858 None:intergenic
GAAGCTACTCAAAAGTCTAA+CGG 0.596651 4_2:+74014695 Msa0621770:CDS
ACCTGAGGGTGATCTTGTTG+AGG 0.596718 4_2:-74010636 None:intergenic
TAGGATGGGACTAGACTGGT+CGG 0.607600 4_2:-74008563 None:intergenic
AAGCAAGCAAAGTTGGACCA+TGG 0.609079 4_2:+74014665 Msa0621770:CDS
GATTTATAAGCAGATCAAAG+AGG 0.614597 4_2:-74008775 None:intergenic
ATAGTCAGCAAGCTACTGCA+TGG 0.620983 4_2:-74010537 None:intergenic
TTTAACCCAAAGTGAATGTG+AGG 0.621756 4_2:-74014629 None:intergenic
AAATTGTGAATGGTTAGGAT+GGG 0.621819 4_2:-74008577 None:intergenic
TCTACTATAAGCACAAACAA+AGG 0.622531 4_2:+74008796 Msa0621770:five_prime_UTR
CGCGTGTAAAAGAAGAGAGT+GGG 0.631190 4_2:-74008411 None:intergenic
AAGAGAGTGGGTGTAGTGTG+GGG 0.651837 4_2:-74008399 None:intergenic
GCAAGCAAAGTTGGACCATG+GGG 0.655051 4_2:+74014667 Msa0621770:CDS
TAATCCAGATATCAGTCACA+GGG 0.666315 4_2:+74013745 Msa0621770:CDS
ATTATACTATTACTTAAACA+AGG 0.668209 4_2:-74014872 None:intergenic
TCATCAAGAAGAAAGCAGGA+AGG 0.669010 4_2:+74010868 Msa0621770:CDS
GCGCGTGTAAAAGAAGAGAG+TGG 0.677200 4_2:-74008412 None:intergenic
ACTATAGTGACAGTTAGATG+TGG 0.681695 4_2:+74010555 Msa0621770:CDS
CTTCTGCAACACTACTCTAG+CGG 0.702590 4_2:+74008909 Msa0621770:CDS
TATTACTTAAACAAGGTGAG+GGG 0.704141 4_2:-74014865 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAATTAATTATTATAAG+TGG - chr4_2:74008518-74008537 None:intergenic 10.0%
!!! ATTGATTTATTTAATTATTC+AGG + chr4_2:74009358-74009377 Msa0621770:intron 10.0%
!! AAAAAAAATAAAGATGAAAT+AGG - chr4_2:74009634-74009653 None:intergenic 10.0%
!! TAACTCTTAAATATATAAAA+AGG + chr4_2:74011297-74011316 Msa0621770:intron 10.0%
!! ATAAAAAAAAATTCTATGTT+TGG + chr4_2:74011417-74011436 Msa0621770:intron 10.0%
!!! TCATTTTAATAAATTTTTTG+GGG + chr4_2:74011651-74011670 Msa0621770:intron 10.0%
!! TATTTGTATGAAATTATTTA+TGG - chr4_2:74013133-74013152 None:intergenic 10.0%
!!! TAACTTTTAAAACTAATTTT+AGG + chr4_2:74013417-74013436 Msa0621770:intron 10.0%
!! TCTTAAATATATATTGTATA+GGG + chr4_2:74013607-74013626 Msa0621770:intron 10.0%
!!! TTTTTATTTTTTTTATGACA+AGG + chr4_2:74014109-74014128 Msa0621770:intron 10.0%
!! AAACAAGATATTAATAAGTA+GGG - chr4_2:74008540-74008559 None:intergenic 15.0%
!! AAAACAAGATATTAATAAGT+AGG - chr4_2:74008541-74008560 None:intergenic 15.0%
!!! TTCTTGTTATTAAGAAATAT+AGG - chr4_2:74009006-74009025 None:intergenic 15.0%
!!! TTTCTATCTTTTATCATATA+TGG + chr4_2:74009922-74009941 Msa0621770:intron 15.0%
!!! TTCATGTTATTTTTTTGAAA+AGG - chr4_2:74011111-74011130 None:intergenic 15.0%
!!! CATAGAATTTTTTTTTATAG+AGG - chr4_2:74011415-74011434 None:intergenic 15.0%
!!! CATTTTAATATGTTTGAATT+TGG - chr4_2:74011555-74011574 None:intergenic 15.0%
!! ATTATTTAATGATTGGATAT+TGG + chr4_2:74011849-74011868 Msa0621770:intron 15.0%
!! TTATTTAATGATTGGATATT+GGG + chr4_2:74011850-74011869 Msa0621770:intron 15.0%
!! TTATATCATGTTTAACATTA+TGG - chr4_2:74011906-74011925 None:intergenic 15.0%
!!! AATAAATATGATTTTTTTCC+AGG - chr4_2:74012712-74012731 None:intergenic 15.0%
!!! ATGATTTTCTTTTCTTTTTT+TGG - chr4_2:74012739-74012758 None:intergenic 15.0%
!!! TTGCATATAATCTTTTTATT+AGG - chr4_2:74013226-74013245 None:intergenic 15.0%
!! ATTATATGCAAAATAAGTAT+TGG + chr4_2:74013235-74013254 Msa0621770:intron 15.0%
!! AGATGAAATGAAATAATAAT+AGG + chr4_2:74013359-74013378 Msa0621770:intron 15.0%
!! GTCTTAAATATATATTGTAT+AGG + chr4_2:74013606-74013625 Msa0621770:intron 15.0%
!!! AATTTTTCAATATTAACCTT+TGG - chr4_2:74013972-74013991 None:intergenic 15.0%
!! AAATTGAGGTATATATATAA+AGG + chr4_2:74013987-74014006 Msa0621770:intron 15.0%
!! AATTGAGGTATATATATAAA+GGG + chr4_2:74013988-74014007 Msa0621770:intron 15.0%
!! TTATAGTCATATTATATTGA+GGG - chr4_2:74014452-74014471 None:intergenic 15.0%
!! AACTATATATATAGATTGAA+GGG - chr4_2:74014517-74014536 None:intergenic 15.0%
!! ATTATACTATTACTTAAACA+AGG - chr4_2:74014875-74014894 None:intergenic 15.0%
!! AATAAAATCATTATAGGAAA+GGG - chr4_2:74014906-74014925 None:intergenic 15.0%
!! AATCACAATAAAATCATTAT+AGG - chr4_2:74014912-74014931 None:intergenic 15.0%
!! AGAAAGAAAAAAAATGTCAA+TGG + chr4_2:74008837-74008856 Msa0621770:exon 20.0%
!! GTATATATAGTAGAGTTTAT+AGG - chr4_2:74009122-74009141 None:intergenic 20.0%
!! AATCAATTTAAAAAGGGAAA+GGG - chr4_2:74009345-74009364 None:intergenic 20.0%
!! AAATCAATTTAAAAAGGGAA+AGG - chr4_2:74009346-74009365 None:intergenic 20.0%
!!! TCAAGTTTTTTTCACAATTT+TGG + chr4_2:74009545-74009564 Msa0621770:intron 20.0%
!! AACAAGTTATTATTATAGCA+AGG - chr4_2:74010055-74010074 None:intergenic 20.0%
!! ATTGAAAACATAAACAAAAG+AGG - chr4_2:74010184-74010203 None:intergenic 20.0%
!!! AATGCTTTAATTTCATACTT+TGG - chr4_2:74010332-74010351 None:intergenic 20.0%
!!! ACTGATTTTAGTTTAGTTTA+TGG + chr4_2:74010447-74010466 Msa0621770:intron 20.0%
!!! ATTTTAGTTTAGTTTATGGT+AGG + chr4_2:74010451-74010470 Msa0621770:intron 20.0%
!!! GTAATAAAGTTTTAATTTGC+AGG + chr4_2:74010506-74010525 Msa0621770:intron 20.0%
!! AAATGAAATTATATACCTGA+GGG - chr4_2:74010653-74010672 None:intergenic 20.0%
!! AAAATGAAATTATATACCTG+AGG - chr4_2:74010654-74010673 None:intergenic 20.0%
!!! CTTAAATTGTTCTTAATTTG+TGG + chr4_2:74010680-74010699 Msa0621770:intron 20.0%
!! TGGTAAATGATTTCTATATA+TGG + chr4_2:74010700-74010719 Msa0621770:intron 20.0%
!! ATCAAAAGGTTAATCAATTT+AGG - chr4_2:74011026-74011045 None:intergenic 20.0%
!!! TTTTTAACTAGTAGATCAAA+AGG - chr4_2:74011040-74011059 None:intergenic 20.0%
!! AAATATCTCATCTAATTCTA+TGG + chr4_2:74011129-74011148 Msa0621770:intron 20.0%
!!! TATCACTCTTTCTTTTTTTT+TGG + chr4_2:74011248-74011267 Msa0621770:intron 20.0%
!! AAATAAAATTGCGGTAAATA+TGG - chr4_2:74011477-74011496 None:intergenic 20.0%
!! AGCTTCATAAAATAAAATTG+CGG - chr4_2:74011486-74011505 None:intergenic 20.0%
!!! TAGTTTTATGTTGTATTACA+AGG + chr4_2:74011679-74011698 Msa0621770:intron 20.0%
!! TACTCATGTTATATAGAATA+GGG - chr4_2:74011725-74011744 None:intergenic 20.0%
!! TTACTCATGTTATATAGAAT+AGG - chr4_2:74011726-74011745 None:intergenic 20.0%
!! AGTAAATAGGTAAATGTATT+TGG - chr4_2:74011998-74012017 None:intergenic 20.0%
!! TGTCTTACATATAAGTAAAT+AGG - chr4_2:74012011-74012030 None:intergenic 20.0%
!! TTACTTATATGTAAGACAAT+AGG + chr4_2:74012013-74012032 Msa0621770:intron 20.0%
!! TACTTATATGTAAGACAATA+GGG + chr4_2:74012014-74012033 Msa0621770:intron 20.0%
!!! TGAAAAATACTCAGTTTTTT+AGG - chr4_2:74012257-74012276 None:intergenic 20.0%
!! ATTGCAATAAATTGAAGAAT+GGG - chr4_2:74012411-74012430 None:intergenic 20.0%
!! GTAAATTAATTATCATTGAG+TGG - chr4_2:74012511-74012530 None:intergenic 20.0%
!!! TTCATGTATTTTTGTGTTTT+TGG + chr4_2:74012932-74012951 Msa0621770:intron 20.0%
!!! TCATGTATTTTTGTGTTTTT+GGG + chr4_2:74012933-74012952 Msa0621770:intron 20.0%
!! CTATATTCATTAATTAGAAG+AGG - chr4_2:74012965-74012984 None:intergenic 20.0%
!!! AATCTTTTTATTAGGATTAG+AGG - chr4_2:74013218-74013237 None:intergenic 20.0%
!!! AAACTCAGCATTATTTTAAA+AGG + chr4_2:74013258-74013277 Msa0621770:intron 20.0%
!! AGGTTAATATTGAAAAATTG+AGG + chr4_2:74013973-74013992 Msa0621770:intron 20.0%
!! TAATTGTGATGTAAAGAAAA+AGG - chr4_2:74014148-74014167 None:intergenic 20.0%
!!! TTTTTCTTTACATCACAATT+AGG + chr4_2:74014147-74014166 Msa0621770:intron 20.0%
!!! CCTCATTTTCTATTAAAAAT+TGG - chr4_2:74014179-74014198 None:intergenic 20.0%
!!! CCAATTTTTAATAGAAAATG+AGG + chr4_2:74014176-74014195 Msa0621770:intron 20.0%
!! GTTATAGTCATATTATATTG+AGG - chr4_2:74014453-74014472 None:intergenic 20.0%
!! CAACTATATATATAGATTGA+AGG - chr4_2:74014518-74014537 None:intergenic 20.0%
!! CTTCAATCTATATATATAGT+TGG + chr4_2:74014516-74014535 Msa0621770:intron 20.0%
!! AAATATGAATATATATGCAG+TGG + chr4_2:74014597-74014616 Msa0621770:intron 20.0%
!! AATATGAATATATATGCAGT+GGG + chr4_2:74014598-74014617 Msa0621770:intron 20.0%
!! TTCTATTGATACACATAAAA+TGG + chr4_2:74014719-74014738 Msa0621770:exon 20.0%
!! CAATAAAATCATTATAGGAA+AGG - chr4_2:74014907-74014926 None:intergenic 20.0%
!! TTAACTATTATGTTGAACTT+AGG + chr4_2:74014935-74014954 Msa0621770:three_prime_UTR 20.0%
! TGATGAAAGACATAATAACA+AGG - chr4_2:74008965-74008984 None:intergenic 25.0%
! ATAACAAGAAATAAGTGAAG+TGG + chr4_2:74009016-74009035 Msa0621770:intron 25.0%
! TACATATAGTGCTAATTTGA+AGG + chr4_2:74009155-74009174 Msa0621770:intron 25.0%
! ACATATAGTGCTAATTTGAA+GGG + chr4_2:74009156-74009175 Msa0621770:intron 25.0%
! ATCCAAAATGCATAATTTGA+AGG + chr4_2:74009250-74009269 Msa0621770:intron 25.0%
!!! TAGGTTTTTTTCTTTCTTTC+TGG - chr4_2:74009615-74009634 None:intergenic 25.0%
! AAGTTATTATTATAGCAAGG+AGG - chr4_2:74010052-74010071 None:intergenic 25.0%
! TTGTACTAATATATTGACAG+TGG + chr4_2:74010288-74010307 Msa0621770:intron 25.0%
! TGTACTAATATATTGACAGT+GGG + chr4_2:74010289-74010308 Msa0621770:intron 25.0%
! ATATCTCTATCCTCTTAATT+GGG - chr4_2:74010361-74010380 None:intergenic 25.0%
! TCAAAGAATCTGTCATTAAT+AGG - chr4_2:74010418-74010437 None:intergenic 25.0%
! TATTAATGACAGATTCTTTG+AGG + chr4_2:74010417-74010436 Msa0621770:CDS 25.0%
!!! TAATTTGCTTTCTGTTAACA+TGG + chr4_2:74010587-74010606 Msa0621770:CDS 25.0%
!! AATTTGCTTTCTGTTAACAT+GGG + chr4_2:74010588-74010607 Msa0621770:CDS 25.0%
! AAAAGGTTAATCAATTTAGG+AGG - chr4_2:74011023-74011042 None:intergenic 25.0%
! TTATTACCCAATAAAACCTA+AGG + chr4_2:74011877-74011896 Msa0621770:intron 25.0%
! TTTAACATTATGGTATCCTT+AGG - chr4_2:74011896-74011915 None:intergenic 25.0%
! ACCTTTGCTTATATTTAAGA+CGG - chr4_2:74011949-74011968 None:intergenic 25.0%
! ATATGAATAAAGTTAACCTG+CGG + chr4_2:74012092-74012111 Msa0621770:intron 25.0%
!! AATGATGATGTGAAGATAAT+AGG - chr4_2:74012344-74012363 None:intergenic 25.0%
! TTGCAATAAATTGAAGAATG+GGG - chr4_2:74012410-74012429 None:intergenic 25.0%
! GATTGCAATAAATTGAAGAA+TGG - chr4_2:74012412-74012431 None:intergenic 25.0%
!! ACTAATTTGCACATGTATAT+TGG - chr4_2:74012456-74012475 None:intergenic 25.0%
! GAGGAATTACTATCATTATA+GGG - chr4_2:74012641-74012660 None:intergenic 25.0%
! TTGATCTTAGAATTGCAAAT+TGG - chr4_2:74012901-74012920 None:intergenic 25.0%
! CACAAAAATACATGAATAGA+TGG - chr4_2:74012928-74012947 None:intergenic 25.0%
! TGATTCAATTGATATAGTGT+TGG + chr4_2:74013054-74013073 Msa0621770:intron 25.0%
!! TCCAAACTTTTCTAATACAT+GGG - chr4_2:74013484-74013503 None:intergenic 25.0%
!! ATCCAAACTTTTCTAATACA+TGG - chr4_2:74013485-74013504 None:intergenic 25.0%
! ATGTATGTATATGCTGAAAA+AGG - chr4_2:74013829-74013848 None:intergenic 25.0%
! AAGCACTTGAAGTATATTAT+TGG - chr4_2:74014017-74014036 None:intergenic 25.0%
!! TGTTCTTATTTAAGCAACTA+TGG + chr4_2:74014051-74014070 Msa0621770:intron 25.0%
! AAAATGAGGTAAAGTTATAG+TGG + chr4_2:74014190-74014209 Msa0621770:intron 25.0%
!! ATCAAAAGGAAAGCATAAAA+TGG - chr4_2:74014243-74014262 None:intergenic 25.0%
! AGTTGCATAATATCATCAAA+AGG - chr4_2:74014257-74014276 None:intergenic 25.0%
! GATGATATTATGCAACTATA+AGG + chr4_2:74014260-74014279 Msa0621770:intron 25.0%
! AAATGCTAGTAATGTATTGA+GGG - chr4_2:74014354-74014373 None:intergenic 25.0%
! AAAATGCTAGTAATGTATTG+AGG - chr4_2:74014355-74014374 None:intergenic 25.0%
! CTATATAATTATCGATCAGT+TGG + chr4_2:74014750-74014769 Msa0621770:three_prime_UTR 25.0%
AAATTGTGAATGGTTAGGAT+GGG - chr4_2:74008580-74008599 None:intergenic 30.0%
AAAATTGTGAATGGTTAGGA+TGG - chr4_2:74008581-74008600 None:intergenic 30.0%
GTACAAAATTGTGAATGGTT+AGG - chr4_2:74008585-74008604 None:intergenic 30.0%
GATGTGTACAAAATTGTGAA+TGG - chr4_2:74008590-74008609 None:intergenic 30.0%
AGAATTTATAGACTAGCAAG+AGG - chr4_2:74008714-74008733 None:intergenic 30.0%
GATTTATAAGCAGATCAAAG+AGG - chr4_2:74008778-74008797 None:intergenic 30.0%
TCTACTATAAGCACAAACAA+AGG + chr4_2:74008796-74008815 Msa0621770:five_prime_UTR 30.0%
GTCAATGGATATGAATATGA+TGG + chr4_2:74008852-74008871 Msa0621770:CDS 30.0%
!! ATTTTATGAGAAAGTGCAAC+TGG + chr4_2:74009088-74009107 Msa0621770:intron 30.0%
!! TTTTATGAGAAAGTGCAACT+GGG + chr4_2:74009089-74009108 Msa0621770:intron 30.0%
TTCTAAACAAACAAACACCT+TGG - chr4_2:74009224-74009243 None:intergenic 30.0%
! AGCCTTCAAATTATGCATTT+TGG - chr4_2:74009255-74009274 None:intergenic 30.0%
! GAGAAAGAGATTTCTTTTCA+TGG - chr4_2:74009452-74009471 None:intergenic 30.0%
GTATTCTGTTCATCATGATT+TGG + chr4_2:74009496-74009515 Msa0621770:intron 30.0%
AAAGATGGTGCTTTCTTAAA+AGG - chr4_2:74009694-74009713 None:intergenic 30.0%
TTTCAACAGAGAAAGAAAGA+TGG - chr4_2:74009709-74009728 None:intergenic 30.0%
AGATCAAAGGATAGCATATA+GGG - chr4_2:74009809-74009828 None:intergenic 30.0%
AAAAGCTATAGACAGATCAA+AGG - chr4_2:74009822-74009841 None:intergenic 30.0%
AACAAAAGAGGACAAATAAG+AGG - chr4_2:74010172-74010191 None:intergenic 30.0%
!!! GTTGCATTAGTTTTCAAAGT+TGG + chr4_2:74010221-74010240 Msa0621770:intron 30.0%
!!! TAGTTTTCAAAGTTGGTGTT+TGG + chr4_2:74010228-74010247 Msa0621770:intron 30.0%
CATATCTCTATCCTCTTAAT+TGG - chr4_2:74010362-74010381 None:intergenic 30.0%
GGATAGAGATATGACTATAT+AGG + chr4_2:74010369-74010388 Msa0621770:intron 30.0%
AAGAATCTGTCATTAATAGG+AGG - chr4_2:74010415-74010434 None:intergenic 30.0%
AAGGAGACATTTCATGTTAT+TGG - chr4_2:74011092-74011111 None:intergenic 30.0%
CGATATTCTTCATCTATGTT+TGG + chr4_2:74011385-74011404 Msa0621770:intron 30.0%
AAATTGCGGTAAATATGGAT+TGG - chr4_2:74011472-74011491 None:intergenic 30.0%
!!! TGGTATCCTTAGGTTTTATT+GGG - chr4_2:74011886-74011905 None:intergenic 30.0%
!! ATGGTATCCTTAGGTTTTAT+TGG - chr4_2:74011887-74011906 None:intergenic 30.0%
TCCGTCTTAAATATAAGCAA+AGG + chr4_2:74011945-74011964 Msa0621770:intron 30.0%
TATGAATAAAGTTAACCTGC+GGG + chr4_2:74012093-74012112 Msa0621770:intron 30.0%
CTGAACAATTTCGTTACATA+AGG + chr4_2:74012139-74012158 Msa0621770:intron 30.0%
! CTGAGTATTTTTCATAAGAG+TGG + chr4_2:74012263-74012282 Msa0621770:intron 30.0%
!! AGTTTTGTACCTAAAGAAAG+TGG - chr4_2:74012309-74012328 None:intergenic 30.0%
! GAAGATAATAGGCCAATTTT+GGG - chr4_2:74012333-74012352 None:intergenic 30.0%
! TGAAGATAATAGGCCAATTT+TGG - chr4_2:74012334-74012353 None:intergenic 30.0%
!! TGTATATTGGTCTAGTTCTA+GGG - chr4_2:74012443-74012462 None:intergenic 30.0%
!! ATGTATATTGGTCTAGTTCT+AGG - chr4_2:74012444-74012463 None:intergenic 30.0%
TACCAATAAGAATCATCATG+AGG - chr4_2:74012584-74012603 None:intergenic 30.0%
ATGATGATTCTTATTGGTAG+TGG + chr4_2:74012585-74012604 Msa0621770:intron 30.0%
GGAGGAATTACTATCATTAT+AGG - chr4_2:74012642-74012661 None:intergenic 30.0%
ATAGTAATTCCTCCAACTAA+TGG + chr4_2:74012648-74012667 Msa0621770:intron 30.0%
TAGTAATTCCTCCAACTAAT+GGG + chr4_2:74012649-74012668 Msa0621770:intron 30.0%
!! AGGCATACAATTGATTTTCT+TGG + chr4_2:74013379-74013398 Msa0621770:intron 30.0%
TCCCATGTATTAGAAAAGTT+TGG + chr4_2:74013480-74013499 Msa0621770:intron 30.0%
ATAAGCTCAAGATGCATATA+GGG - chr4_2:74013570-74013589 None:intergenic 30.0%
AATAAGCTCAAGATGCATAT+AGG - chr4_2:74013571-74013590 None:intergenic 30.0%
GGAGGAAATACAAAGAATTA+AGG + chr4_2:74013718-74013737 Msa0621770:CDS 30.0%
TTCAGCATATACATACATTC+TGG + chr4_2:74013831-74013850 Msa0621770:intron 30.0%
! TGTGATGGGAAAAATTGATA+TGG - chr4_2:74013877-74013896 None:intergenic 30.0%
! ATTTGCTAGCTATATAGACA+AGG + chr4_2:74014403-74014422 Msa0621770:intron 30.0%
TTTGCTAGCTATATAGACAA+GGG + chr4_2:74014404-74014423 Msa0621770:intron 30.0%
TAGTCATATTATATTGAGGG+TGG - chr4_2:74014449-74014468 None:intergenic 30.0%
! ATTTTCCTCACATTCACTTT+GGG + chr4_2:74014624-74014643 Msa0621770:CDS 30.0%
!!! CATTTTTTTACGTCAAGAAC+AGG - chr4_2:74014782-74014801 None:intergenic 30.0%
GTTCTTGACGTAAAAAAATG+AGG + chr4_2:74014782-74014801 Msa0621770:three_prime_UTR 30.0%
TATTACTTAAACAAGGTGAG+GGG - chr4_2:74014868-74014887 None:intergenic 30.0%
CTATTACTTAAACAAGGTGA+GGG - chr4_2:74014869-74014888 None:intergenic 30.0%
ACTATTACTTAAACAAGGTG+AGG - chr4_2:74014870-74014889 None:intergenic 30.0%
TATAGTGCTAATTTGAAGGG+TGG + chr4_2:74009159-74009178 Msa0621770:intron 35.0%
TTTGAAGGCTGTGAATGAAT+AGG + chr4_2:74009265-74009284 Msa0621770:intron 35.0%
! ACTCACAGAGAAGGTATATT+AGG + chr4_2:74009297-74009316 Msa0621770:intron 35.0%
! CTCACAGAGAAGGTATATTA+GGG + chr4_2:74009298-74009317 Msa0621770:intron 35.0%
TCTGATATGTCTGTCAAAGT+TGG + chr4_2:74009470-74009489 Msa0621770:intron 35.0%
CTGATATGTCTGTCAAAGTT+GGG + chr4_2:74009471-74009490 Msa0621770:intron 35.0%
CAGATCAAAGGATAGCATAT+AGG - chr4_2:74009810-74009829 None:intergenic 35.0%
AAAAGTTAGCACTCTCACAA+TGG - chr4_2:74009983-74010002 None:intergenic 35.0%
GGATCTGACAAATATGACAT+TGG - chr4_2:74010018-74010037 None:intergenic 35.0%
TGTGTGTACTGTACAAGTAT+AGG - chr4_2:74010124-74010143 None:intergenic 35.0%
CATTGAGAATCCCAATTAAG+AGG + chr4_2:74010348-74010367 Msa0621770:intron 35.0%
ACTATAGTGACAGTTAGATG+TGG + chr4_2:74010555-74010574 Msa0621770:CDS 35.0%
TAGTACCTAGCAAAAGTTTG+GGG - chr4_2:74011759-74011778 None:intergenic 35.0%
CTAGTACCTAGCAAAAGTTT+GGG - chr4_2:74011760-74011779 None:intergenic 35.0%
ACTAGTACCTAGCAAAAGTT+TGG - chr4_2:74011761-74011780 None:intergenic 35.0%
ATGAATAAAGTTAACCTGCG+GGG + chr4_2:74012094-74012113 Msa0621770:intron 35.0%
TAACGAAATTGTTCAGTCTG+TGG - chr4_2:74012135-74012154 None:intergenic 35.0%
CAATTTCGTTACATAAGGTC+AGG + chr4_2:74012144-74012163 Msa0621770:intron 35.0%
CTAGTTAGTTACTACACAAC+AGG + chr4_2:74012190-74012209 Msa0621770:intron 35.0%
GGCAGAAGTTAATGAAAGTA+AGG + chr4_2:74012211-74012230 Msa0621770:intron 35.0%
TGAAAGTAAGGTCATGATTG+AGG + chr4_2:74012223-74012242 Msa0621770:intron 35.0%
!!! ACTCAGTTTTTTAGGACAAG+TGG - chr4_2:74012249-74012268 None:intergenic 35.0%
TCTGAGTATCCACTTTCTTT+AGG + chr4_2:74012297-74012316 Msa0621770:intron 35.0%
GGTACAAAACTACCCAAAAT+TGG + chr4_2:74012318-74012337 Msa0621770:intron 35.0%
CACCTCATGATGATTCTTAT+TGG + chr4_2:74012579-74012598 Msa0621770:intron 35.0%
TGGTACTTCAATACCATTAG+TGG + chr4_2:74012605-74012624 Msa0621770:intron 35.0%
GGTACTTCAATACCATTAGT+GGG + chr4_2:74012606-74012625 Msa0621770:intron 35.0%
! GGGCTAAAGTATTTAACAAC+AGG - chr4_2:74012675-74012694 None:intergenic 35.0%
GTGTTCCTTCTGCTTATAAT+CGG + chr4_2:74012853-74012872 Msa0621770:CDS 35.0%
ATGAACCGATTATAAGCAGA+AGG - chr4_2:74012861-74012880 None:intergenic 35.0%
! TTGAAGAGCCTTCTATCTTT+TGG + chr4_2:74013689-74013708 Msa0621770:intron 35.0%
!!! CCTTCTATCTTTTGGTTTCA+GGG + chr4_2:74013697-74013716 Msa0621770:intron 35.0%
TAATCCAGATATCAGTCACA+GGG + chr4_2:74013745-74013764 Msa0621770:CDS 35.0%
! AATTTTTCCCATCACATGTG+TGG + chr4_2:74013881-74013900 Msa0621770:intron 35.0%
TGTTGAGACTTTACCATTCA+AGG + chr4_2:74013946-74013965 Msa0621770:intron 35.0%
!! TATTAACCTTTGGCCTTGAA+TGG - chr4_2:74013962-74013981 None:intergenic 35.0%
ATAAGAACAACCCTCGTTAT+AGG - chr4_2:74014040-74014059 None:intergenic 35.0%
! ATCACGTATGTACTAGTCTA+GGG - chr4_2:74014216-74014235 None:intergenic 35.0%
! TAAGGTTGACTTTGTGATTG+AGG + chr4_2:74014278-74014297 Msa0621770:intron 35.0%
! ATAGATTGAAGGGTGCAAAT+TGG - chr4_2:74014507-74014526 None:intergenic 35.0%
ATTTAAACGAGACAATCAGC+TGG - chr4_2:74014581-74014600 None:intergenic 35.0%
! CATTTTCCTCACATTCACTT+TGG + chr4_2:74014623-74014642 Msa0621770:CDS 35.0%
TTTAACCCAAAGTGAATGTG+AGG - chr4_2:74014632-74014651 None:intergenic 35.0%
! CATTCACTTTGGGTTAAAGT+TGG + chr4_2:74014634-74014653 Msa0621770:CDS 35.0%
GAAGCTACTCAAAAGTCTAA+CGG + chr4_2:74014695-74014714 Msa0621770:CDS 35.0%
TTCCCATTCACATTATTGCA+TGG + chr4_2:74014816-74014835 Msa0621770:three_prime_UTR 35.0%
TCCCATTCACATTATTGCAT+GGG + chr4_2:74014817-74014836 Msa0621770:three_prime_UTR 35.0%
GGTTGAATGAAGCAATTCCA+AGG + chr4_2:74009204-74009223 Msa0621770:intron 40.0%
AAGGCTGTGAATGAATAGGT+AGG + chr4_2:74009269-74009288 Msa0621770:intron 40.0%
AGGCTGTGAATGAATAGGTA+GGG + chr4_2:74009270-74009289 Msa0621770:intron 40.0%
ATATGTCTGTCAAAGTTGGG+TGG + chr4_2:74009474-74009493 Msa0621770:intron 40.0%
! CATCATGATTTGGCAGTGAA+TGG + chr4_2:74009506-74009525 Msa0621770:intron 40.0%
!! AGCAAGGAGGAAGCATTTAT+AGG - chr4_2:74010039-74010058 None:intergenic 40.0%
CAGTGGGATGAAGAAAATGA+TGG + chr4_2:74010305-74010324 Msa0621770:intron 40.0%
ACTGTCATCAAGAAGAAAGC+AGG + chr4_2:74010864-74010883 Msa0621770:CDS 40.0%
TCATCAAGAAGAAAGCAGGA+AGG + chr4_2:74010868-74010887 Msa0621770:CDS 40.0%
GTTACTACATAGTGTCATCG+AGG + chr4_2:74011523-74011542 Msa0621770:intron 40.0%
! TGATACCCCAAACTTTTGCT+AGG + chr4_2:74011751-74011770 Msa0621770:intron 40.0%
TTACATAAGGTCAGGCTTGA+AGG + chr4_2:74012152-74012171 Msa0621770:intron 40.0%
TGGATACTCAGAGAGATGAA+CGG - chr4_2:74012289-74012308 None:intergenic 40.0%
TTAACAACAGGCCCATTAGT+TGG - chr4_2:74012663-74012682 None:intergenic 40.0%
! ACTTTAGCCCCACTTGATTT+TGG + chr4_2:74012685-74012704 Msa0621770:intron 40.0%
TTCCAGGACCAAAATCAAGT+GGG - chr4_2:74012696-74012715 None:intergenic 40.0%
TTTCCAGGACCAAAATCAAG+TGG - chr4_2:74012697-74012716 None:intergenic 40.0%
TATTGTATAGGGCTACCTAG+AGG + chr4_2:74013618-74013637 Msa0621770:intron 40.0%
! TCTGATAAAGTGCTACCTCT+AGG - chr4_2:74013636-74013655 None:intergenic 40.0%
!!! GCCTTCTATCTTTTGGTTTC+AGG + chr4_2:74013696-74013715 Msa0621770:intron 40.0%
CCCTGAAACCAAAAGATAGA+AGG - chr4_2:74013700-74013719 None:intergenic 40.0%
!!! TCTATCTTTTGGTTTCAGGG+AGG + chr4_2:74013700-74013719 Msa0621770:intron 40.0%
GTAATCCAGATATCAGTCAC+AGG + chr4_2:74013744-74013763 Msa0621770:CDS 40.0%
ACTTTACCATTCAAGGCCAA+AGG + chr4_2:74013953-74013972 Msa0621770:intron 40.0%
TTCAAGTGCTTCCTATAACG+AGG + chr4_2:74014026-74014045 Msa0621770:intron 40.0%
TCAAGTGCTTCCTATAACGA+GGG + chr4_2:74014027-74014046 Msa0621770:intron 40.0%
! GATCACGTATGTACTAGTCT+AGG - chr4_2:74014217-74014236 None:intergenic 40.0%
TGCTAGTAATGTATTGAGGG+TGG - chr4_2:74014351-74014370 None:intergenic 40.0%
GAATTGCAACTGCTAGATTG+TGG + chr4_2:74014538-74014557 Msa0621770:intron 40.0%
! CACTTTGGGTTAAAGTTGGA+TGG + chr4_2:74014638-74014657 Msa0621770:CDS 40.0%
CCCCATGCAATAATGTGAAT+GGG - chr4_2:74014821-74014840 None:intergenic 40.0%
CCCATTCACATTATTGCATG+GGG + chr4_2:74014818-74014837 Msa0621770:three_prime_UTR 40.0%
TCCCCATGCAATAATGTGAA+TGG - chr4_2:74014822-74014841 None:intergenic 40.0%
CGCGTGTAAAAGAAGAGAGT+GGG - chr4_2:74008414-74008433 None:intergenic 45.0%
AGAGAGAGAGAAAGAGAGAG+AGG - chr4_2:74008612-74008631 None:intergenic 45.0%
CTTCTGCAACACTACTCTAG+CGG + chr4_2:74008909-74008928 Msa0621770:CDS 45.0%
GAGACTTGAGAGAGAAAGAG+AGG - chr4_2:74010147-74010166 None:intergenic 45.0%
ATAGTCAGCAAGCTACTGCA+TGG - chr4_2:74010540-74010559 None:intergenic 45.0%
GAAAGCAGGAAGGAAGTTGT+AGG + chr4_2:74010878-74010897 Msa0621770:CDS 45.0%
! CTAGGTTGCTCATGGACTAA+AGG - chr4_2:74010944-74010963 None:intergenic 45.0%
AAGTTAACCTGCGGGGTAAT+AGG + chr4_2:74012101-74012120 Msa0621770:intron 45.0%
TCCAGGACCAAAATCAAGTG+GGG - chr4_2:74012695-74012714 None:intergenic 45.0%
GTGTAAGCCACACATGTGAT+GGG - chr4_2:74013891-74013910 None:intergenic 45.0%
TGTGTAAGCCACACATGTGA+TGG - chr4_2:74013892-74013911 None:intergenic 45.0%
TGTAAACGTGCATGCAAAGC+TGG + chr4_2:74014081-74014100 Msa0621770:intron 45.0%
GTAAACGTGCATGCAAAGCT+GGG + chr4_2:74014082-74014101 Msa0621770:intron 45.0%
GCTAGCTATATAGACAAGGG+AGG + chr4_2:74014407-74014426 Msa0621770:intron 45.0%
CAAGGGAGGTGATGATACTT+TGG + chr4_2:74014421-74014440 Msa0621770:intron 45.0%
TCAGCTGGCAGAAAAATCAG+TGG - chr4_2:74014566-74014585 None:intergenic 45.0%
TGGTAGCAAGCAAGCAAAGT+TGG + chr4_2:74014658-74014677 Msa0621770:CDS 45.0%
AAGCAAGCAAAGTTGGACCA+TGG + chr4_2:74014665-74014684 Msa0621770:CDS 45.0%
AGCAAGCAAAGTTGGACCAT+GGG + chr4_2:74014666-74014685 Msa0621770:CDS 45.0%
TTAAACAAGGTGAGGGGAAG+AGG - chr4_2:74014862-74014881 None:intergenic 45.0%
!! TAAAATTAATTATTATAAGT+GGG - chr4_2:74008517-74008536 None:intergenic 5.0%
!! AAAAAATAATTATATATATG+AGG + chr4_2:74009183-74009202 Msa0621770:intron 5.0%
!! TAAATAAATCAATTTAAAAA+GGG - chr4_2:74009351-74009370 None:intergenic 5.0%
!! TTAAATAAATCAATTTAAAA+AGG - chr4_2:74009352-74009371 None:intergenic 5.0%
!!! ATAAATAAATATGTTAATTT+TGG - chr4_2:74009414-74009433 None:intergenic 5.0%
!!! TATCATTTTAATAAATTTTT+TGG + chr4_2:74011649-74011668 Msa0621770:intron 5.0%
!!! ATCATTTTAATAAATTTTTT+GGG + chr4_2:74011650-74011669 Msa0621770:intron 5.0%
!! ATTATATATTATTTAATGAT+TGG + chr4_2:74011842-74011861 Msa0621770:intron 5.0%
!!! TTGTTAAAATATTTTTAATA+GGG - chr4_2:74014378-74014397 None:intergenic 5.0%
!!! ATTGTTAAAATATTTTTAAT+AGG - chr4_2:74014379-74014398 None:intergenic 5.0%
AAGAGAGTGGGTGTAGTGTG+GGG - chr4_2:74008402-74008421 None:intergenic 50.0%
GAAGAGAGTGGGTGTAGTGT+GGG - chr4_2:74008403-74008422 None:intergenic 50.0%
AGAAGAGAGTGGGTGTAGTG+TGG - chr4_2:74008404-74008423 None:intergenic 50.0%
GCGCGTGTAAAAGAAGAGAG+TGG - chr4_2:74008415-74008434 None:intergenic 50.0%
TAGGATGGGACTAGACTGGT+CGG - chr4_2:74008566-74008585 None:intergenic 50.0%
TGGTTAGGATGGGACTAGAC+TGG - chr4_2:74008570-74008589 None:intergenic 50.0%
TAGGGCTAGACTCACAGAGA+AGG + chr4_2:74009288-74009307 Msa0621770:intron 50.0%
TCCTCAACAAGATCACCCTC+AGG + chr4_2:74010635-74010654 Msa0621770:CDS 50.0%
ACCTGAGGGTGATCTTGTTG+AGG - chr4_2:74010639-74010658 None:intergenic 50.0%
!! GAGGAGTTCTAGGTTGCTCA+TGG - chr4_2:74010952-74010971 None:intergenic 50.0%
CGACGAATTGGAGGAGTTCT+AGG - chr4_2:74010962-74010981 None:intergenic 50.0%
TGAGACTCACGACGAATTGG+AGG - chr4_2:74010971-74010990 None:intergenic 50.0%
GAGTGAGACTCACGACGAAT+TGG - chr4_2:74010974-74010993 None:intergenic 50.0%
!! CAATAGGGAGAGAGCACTTG+AGG + chr4_2:74012029-74012048 Msa0621770:intron 50.0%
CTAACTTCCTATTACCCCGC+AGG - chr4_2:74012111-74012130 None:intergenic 50.0%
CTGCGGGGTAATAGGAAGTT+AGG + chr4_2:74012109-74012128 Msa0621770:intron 50.0%
GGGCAAACTCAACCCACTAA+TGG - chr4_2:74012621-74012640 None:intergenic 50.0%
ACAACAGGCCCATTAGTTGG+AGG - chr4_2:74012660-74012679 None:intergenic 50.0%
GGAACACGTTGTCTCTTCTC+TGG - chr4_2:74012840-74012859 None:intergenic 50.0%
GCTTCCCTGTGACTGATATC+TGG - chr4_2:74013752-74013771 None:intergenic 50.0%
GCAAGCAAAGTTGGACCATG+GGG + chr4_2:74014667-74014686 Msa0621770:CDS 50.0%
CAAAGTTGGACCATGGGGTT+GGG + chr4_2:74014672-74014691 Msa0621770:CDS 50.0%
AAAGTTGGACCATGGGGTTG+GGG + chr4_2:74014673-74014692 Msa0621770:CDS 50.0%
! AGGATGGGACTAGACTGGTC+GGG - chr4_2:74008565-74008584 None:intergenic 55.0%
!! GCCCCACTTGATTTTGGTCC+TGG + chr4_2:74012691-74012710 Msa0621770:intron 55.0%
GCAAAGTTGGACCATGGGGT+TGG + chr4_2:74014671-74014690 Msa0621770:CDS 55.0%
! GGATGGGACTAGACTGGTCG+GGG - chr4_2:74008564-74008583 None:intergenic 60.0%
GAGTAGCTTCCCCAACCCCA+TGG - chr4_2:74014685-74014704 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74008380 74015010 74008380 ID=Msa0621770;Name=Msa0621770
chr4_2 mRNA 74008380 74015010 74008380 ID=Msa0621770-mRNA-1;Parent=Msa0621770;Name=Msa0621770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=310|0.85|0.87|1|0.85|0.75|8|283|208
chr4_2 exon 74008380 74008600 74008380 ID=Msa0621770-mRNA-1:exon:22257;Parent=Msa0621770-mRNA-1
chr4_2 exon 74008761 74008930 74008761 ID=Msa0621770-mRNA-1:exon:22258;Parent=Msa0621770-mRNA-1
chr4_2 exon 74010391 74010438 74010391 ID=Msa0621770-mRNA-1:exon:22259;Parent=Msa0621770-mRNA-1
chr4_2 exon 74010528 74010656 74010528 ID=Msa0621770-mRNA-1:exon:22260;Parent=Msa0621770-mRNA-1
chr4_2 exon 74010848 74010980 74010848 ID=Msa0621770-mRNA-1:exon:22261;Parent=Msa0621770-mRNA-1
chr4_2 exon 74012835 74012883 74012835 ID=Msa0621770-mRNA-1:exon:22262;Parent=Msa0621770-mRNA-1
chr4_2 exon 74013718 74013793 74013718 ID=Msa0621770-mRNA-1:exon:22263;Parent=Msa0621770-mRNA-1
chr4_2 exon 74014617 74015010 74014617 ID=Msa0621770-mRNA-1:exon:22264;Parent=Msa0621770-mRNA-1
chr4_2 five_prime_UTR 74008380 74008600 74008380 ID=Msa0621770-mRNA-1:five_prime_utr;Parent=Msa0621770-mRNA-1
chr4_2 five_prime_UTR 74008761 74008849 74008761 ID=Msa0621770-mRNA-1:five_prime_utr;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74008850 74008930 74008850 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74010391 74010438 74010391 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74010528 74010656 74010528 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74010848 74010980 74010848 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74012835 74012883 74012835 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74013718 74013793 74013718 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 CDS 74014617 74014727 74014617 ID=Msa0621770-mRNA-1:cds;Parent=Msa0621770-mRNA-1
chr4_2 three_prime_UTR 74014728 74015010 74014728 ID=Msa0621770-mRNA-1:three_prime_utr;Parent=Msa0621770-mRNA-1
Gene Sequence

>Msa0621770

ATGTCAATGGATATGAATATGATGGCAACAAATGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACTACTCTAGCGGCTTGTAGCTTTCTTTCTGTTCCTCCTATTAATGACAGATTCTTTGAGGTTAGTGTTCCATGCAGTAGCTTGCTGACTATAGTGACAGTTAGATGTGGTCATTGTGCTAATTTGCTTTCTGTTAACATGGGAGCAGCATCACTTCAATCTTTTACTCCTCAACAAGATCACCCTCAGAAACAGCAGCTTATAAACTGTCATCAAGAAGAAAGCAGGAAGGAAGTTGTAGGATCATCATCATCTTCTTCTTCAAAATGCAAAGCATTTCAGCCTTTAGTCCATGAGCAACCTAGAACTCCTCCAATTCGTCCTCCAGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCTAGTAATCCAGATATCAGTCACAGGGAAGCATTTAGCACAGCAGCTAAAAACTGGGCACATTTTCCTCACATTCACTTTGGGTTAAAGTTGGATGGTAGCAAGCAAGCAAAGTTGGACCATGGGGTTGGGGAAGCTACTCAAAAGTCTAACGGATTCTATTGA

Protein sequence

>Msa0621770

MSMDMNMMATNERVCYVHCNFCNTTLAACSFLSVPPINDRFFEVSVPCSSLLTIVTVRCGHCANLLSVNMGAASLQSFTPQQDHPQKQQLINCHQEESRKEVVGSSSSSSSKCKAFQPLVHEQPRTPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDHGVGEATQKSNGFY*