AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1233630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233630 MtrunA17_Chr8g0342971 95.517 870 38 1 1 869 1 870 0.0 1724
Msa1233630 MtrunA17_Chr8g0342951 86.191 869 119 1 1 869 1 868 0.0 1552
Msa1233630 MtrunA17_Chr8g0344211 82.048 869 155 1 1 869 1 868 0.0 1503
Msa1233630 MtrunA17_Chr8g0343011 80.597 871 161 3 1 869 1 865 0.0 1456
Msa1233630 MtrunA17_Chr8g0342891 79.094 861 175 2 9 869 6 861 0.0 1455
Msa1233630 MtrunA17_Chr8g0342921 77.497 871 192 4 1 869 1 869 0.0 1414
Msa1233630 MtrunA17_Chr8g0342931 83.222 751 125 1 119 869 1 750 0.0 1330
Msa1233630 MtrunA17_Chr8g0342901 72.106 864 197 8 9 869 6 828 0.0 1276
Msa1233630 MtrunA17_Chr2g0329911 70.345 870 248 5 1 869 1 861 0.0 1270
Msa1233630 MtrunA17_Chr8g0342881 69.560 864 255 3 6 869 1 856 0.0 1257
Msa1233630 MtrunA17_Chr2g0329901 66.474 865 284 4 5 869 5 863 0.0 1197
Msa1233630 MtrunA17_Chr5g0406871 64.409 871 300 7 5 869 1 867 0.0 1189
Msa1233630 MtrunA17_Chr8g0343021 63.636 869 307 7 5 869 1 864 0.0 1161
Msa1233630 MtrunA17_Chr8g0343031 63.730 874 292 8 8 869 5 865 0.0 1157
Msa1233630 MtrunA17_Chr3g0120071 63.552 867 305 7 5 869 1 858 0.0 1149
Msa1233630 MtrunA17_Chr8g0343001 64.494 859 242 9 14 869 9 807 0.0 1119
Msa1233630 MtrunA17_Chr8g0342991 64.767 860 238 11 14 869 9 807 0.0 1115
Msa1233630 MtrunA17_Chr8g0342981 65.934 819 233 11 66 869 36 823 0.0 1080
Msa1233630 MtrunA17_Chr1g0191921 58.046 870 329 10 10 869 15 858 0.0 1000
Msa1233630 MtrunA17_Chr1g0205611 55.492 874 344 11 15 869 9 856 0.0 980
Msa1233630 MtrunA17_Chr7g0272791 55.543 884 350 12 5 869 8 867 0.0 976
Msa1233630 MtrunA17_Chr8g0344241 86.329 395 54 0 475 869 67 461 0.0 729
Msa1233630 MtrunA17_Chr8g0344241 76.667 60 14 0 295 354 9 68 1.10e-21 99.4
Msa1233630 MtrunA17_Chr8g0344201 46.229 822 424 12 57 868 113 926 0.0 723
Msa1233630 MtrunA17_Chr3g0118651 42.707 857 437 17 32 869 82 903 0.0 662
Msa1233630 MtrunA17_Chr3g0118641 44.929 779 405 15 105 869 134 902 0.0 644
Msa1233630 MtrunA17_Chr8g0338451 41.869 824 433 13 56 852 46 850 0.0 642
Msa1233630 MtrunA17_Chr8g0377101 43.702 778 408 14 109 869 152 916 0.0 630
Msa1233630 MtrunA17_Chr4g0033171 46.262 709 365 11 170 869 24 725 0.0 622
Msa1233630 MtrunA17_Chr3g0118621 45.525 771 397 14 112 869 105 865 0.0 610
Msa1233630 MtrunA17_Chr4g0047281 40.836 813 442 11 65 868 112 894 0.0 607
Msa1233630 MtrunA17_Chr6g0471951 40.637 502 255 5 333 830 18 480 6.03e-130 398
Msa1233630 MtrunA17_Chr7g0218231 59.677 124 49 1 516 638 9 132 2.26e-43 154
Msa1233630 MtrunA17_Chr6g0468081 57.303 89 37 1 551 638 1 89 3.97e-27 105
Msa1233630 MtrunA17_Chr4g0047271 37.363 91 57 0 778 868 1 91 5.17e-14 68.6
Msa1233630 MtrunA17_Chr3g0137991 33.600 125 67 3 745 869 1 109 3.27e-13 66.6
Msa1233630 MtrunA17_Chr7g0272781 42.857 63 35 1 761 823 8 69 1.44e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233630 AT1G55020.1 55.236 869 349 11 13 869 19 859 0.0 969
Msa1233630 AT3G22400.1 53.934 877 359 11 14 869 34 886 0.0 959
Msa1233630 AT1G72520.1 44.647 822 437 11 57 869 114 926 0.0 704
Msa1233630 AT1G17420.1 43.468 865 450 14 14 869 85 919 0.0 691
Msa1233630 AT3G45140.1 43.321 831 424 19 57 869 95 896 0.0 639
Msa1233630 AT3G45140.2 45.065 770 386 17 118 869 4 754 0.0 631
Msa1233630 AT1G67560.1 41.877 831 440 19 63 869 106 917 0.0 609

Find 226 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGAACAGTTTATTATTT+TGG 0.139486 8_2:+10484723 None:intergenic
CTTCATGCAGCAGTTAATTT+TGG 0.170722 8_2:-10483439 Msa1233630:CDS
CTTCAGATGGACTAGAAATA+TGG 0.251328 8_2:-10483672 Msa1233630:CDS
CCACAGTTCCCTTCACCTTT+TGG 0.267984 8_2:+10487111 None:intergenic
TAAATGTATTACACTATCTT+TGG 0.272059 8_2:+10487179 None:intergenic
AAAGAGTCCTTTAAAAGGTT+TGG 0.276421 8_2:-10483166 Msa1233630:CDS
TGGGTATCTAACTTGCTCTT+TGG 0.277731 8_2:+10484904 None:intergenic
AGCCAAAAGAGTCCTTTAAA+AGG 0.287289 8_2:-10483171 Msa1233630:CDS
CTTCCAAGAGATGAATCATT+TGG 0.295229 8_2:-10485505 Msa1233630:CDS
TATATACCTTGAATCACTTT+TGG 0.299777 8_2:+10485235 None:intergenic
ATTCTGAACTCCAAGCATTC+TGG 0.306722 8_2:-10483579 Msa1233630:CDS
TGTGTGTTATACCCTAATTT+TGG 0.308981 8_2:-10482819 Msa1233630:three_prime_UTR
GTTCCTTGAACAATGGTATT+GGG 0.343293 8_2:+10485299 None:intergenic
TATAGATATTCTTACCTTGT+TGG 0.346106 8_2:+10486246 None:intergenic
CTTTCAGTATTGAATTTGAA+TGG 0.347490 8_2:-10486444 Msa1233630:CDS
TCTTGTCTGTAGTACACTAA+TGG 0.349954 8_2:+10486097 None:intergenic
CTTCGGTGGTTTACAAGGAT+TGG 0.353950 8_2:-10484132 Msa1233630:CDS
AAGCTGATGGTTCCATGGTT+TGG 0.356775 8_2:+10486328 None:intergenic
TCACTTCGACTCTCACTCTT+AGG 0.357491 8_2:+10485538 None:intergenic
GCTTCAACACCTTCACTTGC+GGG 0.358789 8_2:+10484518 None:intergenic
TTGTCCTCAAATAGGTCTTT+TGG 0.360375 8_2:+10483314 None:intergenic
CACCCTCAAGGTGATAGTTT+TGG 0.371667 8_2:-10484563 Msa1233630:CDS
ACCCACTCTTTCCATATTTG+AGG 0.381779 8_2:-10484688 Msa1233630:CDS
AAGTTAGATACCCAACTCTT+TGG 0.384049 8_2:-10484895 Msa1233630:CDS
AGTTCCTTGAACAATGGTAT+TGG 0.384497 8_2:+10485298 None:intergenic
AAGCTTGCACCACCCTCATA+TGG 0.385554 8_2:-10483474 Msa1233630:CDS
TGGTGATAAGTCTCTTTGAT+AGG 0.386392 8_2:-10487136 Msa1233630:CDS
GCCTGACAAGAACGCTAGTT+TGG 0.391684 8_2:-10485984 Msa1233630:CDS
ACTTGCAGCCAAACATGGTT+GGG 0.391922 8_2:-10484843 Msa1233630:CDS
TTACGATGTCTACAATGATT+TGG 0.392319 8_2:-10486011 Msa1233630:CDS
TTCGGTGGTTTACAAGGATT+GGG 0.393860 8_2:-10484131 Msa1233630:CDS
GGAAGCAGAAGTTTATGAAT+AGG 0.393945 8_2:+10484265 None:intergenic
CATTCGTCATAGCAACAAAT+AGG 0.394550 8_2:-10484306 Msa1233630:CDS
ATTAGTGCTACCGTTGTTGA+TGG 0.397455 8_2:-10486930 Msa1233630:intron
CAAGTTCTTTCCAGAATGCT+TGG 0.398414 8_2:+10483569 None:intergenic
AGCATTAAAGATGAGTTCAT+TGG 0.402361 8_2:-10487156 Msa1233630:exon
TAGTATTTATAGTAGTTGAT+AGG 0.403852 8_2:+10487244 None:intergenic
AGTTTGGCTCGTCCTGTTGT+TGG 0.404465 8_2:-10485968 Msa1233630:CDS
TCAGCTTTGTTTGCAACTCA+TGG 0.409641 8_2:-10486312 Msa1233630:CDS
AAATAATAAACTGTTCATAC+TGG 0.414321 8_2:-10484720 Msa1233630:CDS
CTTGTGGGGAAAGTATGCTT+TGG 0.416561 8_2:-10484161 Msa1233630:CDS
GTCAGTAAGAGTATCATTCT+TGG 0.417058 8_2:+10483285 None:intergenic
TCCGCCGTTCTGTGGCTCTC+TGG 0.418784 8_2:-10486956 Msa1233630:CDS
ACAGTGACCCCAACCATGTT+TGG 0.421224 8_2:+10484835 None:intergenic
TGCCCAAATGATTCATCTCT+TGG 0.429332 8_2:+10485502 None:intergenic
GAGTTATAACCTTTCCTAGC+TGG 0.429507 8_2:+10485896 None:intergenic
GTCAATCCTTCCTCACTAGA+AGG 0.429867 8_2:+10483040 None:intergenic
TACGATGTCTACAATGATTT+GGG 0.430619 8_2:-10486010 Msa1233630:CDS
CAGAAGATTCATGCCTGAGC+AGG 0.431097 8_2:-10483371 Msa1233630:CDS
GCCAAACTAGCGTTCTTGTC+AGG 0.433304 8_2:+10485983 None:intergenic
GAAGGATGAAGCAGAGTGTA+AGG 0.434159 8_2:+10483058 None:intergenic
ATTACCTCCTTACCAACATT+GGG 0.436546 8_2:-10486481 Msa1233630:CDS
CTTAGCAAGTTCATCGTACT+CGG 0.436601 8_2:+10483342 None:intergenic
GAAGAACTGAAGACTTTAAG+AGG 0.437719 8_2:-10486076 Msa1233630:CDS
CAGCTTTGTTTGCAACTCAT+GGG 0.438633 8_2:-10486311 Msa1233630:CDS
AAGGTGTTGAAGCTTCAATT+TGG 0.440030 8_2:-10484508 Msa1233630:CDS
TTCCATCATCTTGCAAGAAA+AGG 0.440642 8_2:+10484621 None:intergenic
GGCAAGTAAACATTGCTAAC+AGG 0.445982 8_2:+10484539 None:intergenic
GGGAGTGATTGTCCTCAAAT+AGG 0.446127 8_2:+10483306 None:intergenic
GGCGCTGTCAAGTACATTAC+CGG 0.446591 8_2:+10486989 None:intergenic
GAAGCAGAAGTTTATGAATA+GGG 0.447872 8_2:+10484266 None:intergenic
GGTATTATTACCAAAGAGTT+GGG 0.448347 8_2:+10484885 None:intergenic
GTATCTAACTTGCTCTTTGG+TGG 0.450017 8_2:+10484907 None:intergenic
CCACCACCAAAAGTGATTCA+AGG 0.452144 8_2:-10485241 Msa1233630:intron
CCTAGACAAGACCTCTATAA+TGG 0.455935 8_2:+10483258 None:intergenic
AGAGAATTGAAGGTGATCTC+TGG 0.456616 8_2:-10483207 Msa1233630:CDS
TATTGAGTCAACTTTCTTGT+GGG 0.457686 8_2:-10484176 Msa1233630:CDS
TTCAATTTGGCTCCTTGCCA+AGG 0.457965 8_2:-10484495 Msa1233630:CDS
TAGCCCAATACCATTGTTCA+AGG 0.457988 8_2:-10485302 Msa1233630:CDS
TGATGGAACTTTGAAGCCAT+TGG 0.459325 8_2:-10484606 Msa1233630:CDS
TTCCAAGAGATGAATCATTT+GGG 0.462088 8_2:-10485504 Msa1233630:CDS
GGTTGGGGTCACTGTAGAAC+AGG 0.466115 8_2:-10484827 Msa1233630:intron
GTATGCTTTGGAAATGTCTT+CGG 0.467644 8_2:-10484149 Msa1233630:CDS
ATTTACAATTACGTAAGCCT+TGG 0.468480 8_2:+10484478 None:intergenic
ATCACCAACTTGTTAGCCAT+TGG 0.470645 8_2:-10484445 Msa1233630:intron
AATGTCTTCGGTGGTTTACA+AGG 0.470731 8_2:-10484137 Msa1233630:CDS
CGAAGACCATATGCATAAGT+AGG 0.472304 8_2:+10483721 None:intergenic
TTTATCTCCCAATGTTGGTA+AGG 0.474944 8_2:+10486474 None:intergenic
TTGGCTCGTCCTGTTGTTGG+AGG 0.477565 8_2:-10485965 Msa1233630:CDS
TTTCAGTATTGAATTTGAAT+GGG 0.479425 8_2:-10486443 Msa1233630:CDS
ACTTTAAGAGGAGATGGAAC+TGG 0.480496 8_2:-10486064 Msa1233630:CDS
TACCTTGGGGAGAGAATTGA+AGG 0.481053 8_2:-10483217 Msa1233630:CDS
CTTCTGATGAGCAATACCTT+GGG 0.481710 8_2:-10483231 Msa1233630:CDS
AACTTGCAGCCAAACATGGT+TGG 0.482429 8_2:-10484844 Msa1233630:CDS
CTGATGGTGAAGCGGCCCTT+AGG 0.483521 8_2:-10485267 Msa1233630:CDS
AGCCCCGGTGGTGTAATTGA+CGG 0.484854 8_2:-10487038 Msa1233630:CDS
GTGCTAGATCCTCCAACAAC+AGG 0.487764 8_2:+10485956 None:intergenic
CGCCTTGTTCCGCCGTTCTG+TGG 0.490680 8_2:-10486964 Msa1233630:CDS
GAGGACCCTACTTATGCATA+TGG 0.491131 8_2:-10483727 Msa1233630:CDS
TACCTAATGATCTAATCAAA+AGG 0.492577 8_2:-10484090 Msa1233630:intron
TTCAGATGGACTAGAAATAT+GGG 0.494445 8_2:-10483671 Msa1233630:CDS
AATGACTTATAATGCAAGAA+AGG 0.494616 8_2:+10482772 None:intergenic
AACTGGAGAGCGTAAGGAAT+GGG 0.501583 8_2:-10486047 Msa1233630:CDS
TTATTGAGTCAACTTTCTTG+TGG 0.503707 8_2:-10484177 Msa1233630:CDS
CATACCAATGGCTAACAAGT+TGG 0.505159 8_2:+10484441 None:intergenic
CTGAAGACTTTAAGAGGAGA+TGG 0.506033 8_2:-10486070 Msa1233630:CDS
TATTACCTCCTTACCAACAT+TGG 0.506824 8_2:-10486482 Msa1233630:CDS
TCAGTAAGAGTATCATTCTT+GGG 0.507336 8_2:+10483286 None:intergenic
AGCTTCAACACCTTCACTTG+CGG 0.510118 8_2:+10484517 None:intergenic
CGGAAAAGTTCCTTGAACAA+TGG 0.511486 8_2:+10485292 None:intergenic
TGCATTAGCACGAAATGTGT+TGG 0.511711 8_2:-10484215 Msa1233630:CDS
CTCTAGAGGAGTGGCTGCTG+AGG 0.513418 8_2:-10483746 Msa1233630:intron
TACTGACTTGACCATTATAG+AGG 0.518055 8_2:-10483269 Msa1233630:CDS
TCTAGTCCATCTGAAGCATA+CGG 0.518479 8_2:+10483679 None:intergenic
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8_2:+10486115 None:intergenic
AGCTTGTGTCTTGTAACCAT+GGG 0.519908 8_2:+10487215 None:intergenic
GCTTCTGATGAGCAATACCT+TGG 0.520099 8_2:-10483232 Msa1233630:CDS
GACCAAAACTATCACCTTGA+GGG 0.520938 8_2:+10484561 None:intergenic
TTTGCAAGGGAGATGATTGC+TGG 0.521676 8_2:-10485088 Msa1233630:CDS
AGCCACAGAACGGCGGAACA+AGG 0.523357 8_2:+10486962 None:intergenic
CTTCATCCTTCTAGTGAGGA+AGG 0.524569 8_2:-10483046 Msa1233630:CDS
TTCCTCAAATATGGAAAGAG+TGG 0.524733 8_2:+10484686 None:intergenic
GACAATGACATGGGAACTCC+AGG 0.526446 8_2:-10486421 Msa1233630:CDS
GTGCTGAAGCAATCCATATG+AGG 0.530017 8_2:+10483461 None:intergenic
TGGTATTATTACCAAAGAGT+TGG 0.532290 8_2:+10484884 None:intergenic
AGATGGAACTGGAGAGCGTA+AGG 0.532462 8_2:-10486053 Msa1233630:CDS
TCTCTTTGATAGGCACCAAA+AGG 0.532921 8_2:-10487126 Msa1233630:CDS
AAACAAAGCTGATGGTTCCA+TGG 0.534625 8_2:+10486323 None:intergenic
CTTCAAGAGTCAAGCTCACA+AGG 0.535265 8_2:+10486356 None:intergenic
CACCTTCCCTTACCCTCGAA+GGG 0.538349 8_2:-10485936 Msa1233630:CDS
AGAGTGTAAGGCATCTTCAC+TGG 0.540273 8_2:+10483070 None:intergenic
TTGCTTGTTCTCTAGAGGAG+TGG 0.540326 8_2:-10483755 Msa1233630:intron
TTTCCTAGCTGGTTTCCTGC+CGG 0.541247 8_2:+10485907 None:intergenic
GGGCCGCTTCACCATCAGTT+CGG 0.541561 8_2:+10485272 None:intergenic
CTATTTGTTGCTATGACGAA+TGG 0.543162 8_2:+10484307 None:intergenic
AAACTATCACCTTGAGGGTG+TGG 0.543185 8_2:+10484566 None:intergenic
CTCACTGCAGCTCAAAGCCC+CGG 0.548891 8_2:-10487053 Msa1233630:CDS
TGCTTTGGAAATGTCTTCGG+TGG 0.549908 8_2:-10484146 Msa1233630:CDS
CGAGTACGATGAACTTGCTA+AGG 0.550402 8_2:-10483341 Msa1233630:CDS
TGGTCTTCGACTTCTAATAG+AGG 0.551214 8_2:-10483707 Msa1233630:CDS
GCACCTTCCCTTACCCTCGA+AGG 0.551426 8_2:-10485937 Msa1233630:CDS
ATTACCAAAAGACCTATTTG+AGG 0.552422 8_2:-10483318 Msa1233630:CDS
AGAAAACTTGCAGCCAAACA+TGG 0.554723 8_2:-10484848 Msa1233630:CDS
ATAACATGACGATATACGTA+GGG 0.555664 8_2:+10482910 None:intergenic
GAACTGGAGAGCGTAAGGAA+TGG 0.556779 8_2:-10486048 Msa1233630:CDS
CAATTACGTAAGCCTTGGCA+AGG 0.558608 8_2:+10484483 None:intergenic
AGGAACTGGAAAAGGCAAAG+TGG 0.560594 8_2:-10486530 Msa1233630:CDS
CTACTTAGTTCAATCGCCAA+TGG 0.560986 8_2:+10484590 None:intergenic
CTGTAGTACACTAATGGAGC+TGG 0.564302 8_2:+10486103 None:intergenic
TTAGCAAGTTCATCGTACTC+GGG 0.565766 8_2:+10483343 None:intergenic
AAGGATGGTTCTAGTAGCAT+AGG 0.566048 8_2:+10484640 None:intergenic
CAAATGATTCATCTCTTGGA+AGG 0.568278 8_2:+10485506 None:intergenic
ATTGAGTCAACTTTCTTGTG+GGG 0.569927 8_2:-10484175 Msa1233630:CDS
TCTTCAAAAGTGTTTAACTC+AGG 0.570772 8_2:+10485382 None:intergenic
TATAGTAGTTGATAGGTGCA+AGG 0.572221 8_2:+10487251 None:intergenic
GAGCTGGTGTTTCACTTGGA+AGG 0.572257 8_2:+10486119 None:intergenic
GACTACCCGTATGCTTCAGA+TGG 0.572331 8_2:-10483685 Msa1233630:CDS
CCATTATAGAGGTCTTGTCT+AGG 0.575033 8_2:-10483258 Msa1233630:CDS
AGTAGCATAGGCCTTTGTCT+CGG 0.575323 8_2:+10484652 None:intergenic
AAGCTTGTGTCTTGTAACCA+TGG 0.575793 8_2:+10487214 None:intergenic
TCCTCAAATATGGAAAGAGT+GGG 0.575970 8_2:+10484687 None:intergenic
GTTTACTTGCCCGCAAGTGA+AGG 0.576493 8_2:-10484527 Msa1233630:CDS
GAACCGGCAGGAAACCAGCT+AGG 0.577160 8_2:-10485910 Msa1233630:CDS
AAACCGTCAATTACACCACC+GGG 0.577826 8_2:+10487035 None:intergenic
ATTTGAATGGGACAATGACA+TGG 0.578107 8_2:-10486431 Msa1233630:CDS
TGATAGGCACCAAAAGGTGA+AGG 0.578229 8_2:-10487120 Msa1233630:CDS
GATGTGCGCTCGCTCTATGA+AGG 0.579384 8_2:-10485361 Msa1233630:CDS
ATCTCCCAATGTTGGTAAGG+AGG 0.582864 8_2:+10486477 None:intergenic
AGTTCACTTAGTATTTCAGT+AGG 0.583265 8_2:+10485325 None:intergenic
AATAAATGCAACCGAGACAA+AGG 0.583456 8_2:-10484663 Msa1233630:CDS
CACCTTCAATTCTCTCCCCA+AGG 0.585110 8_2:+10483215 None:intergenic
CTTGAAGATGTTCCAAACCA+TGG 0.587012 8_2:-10486340 Msa1233630:CDS
TAGCAAGTTCATCGTACTCG+GGG 0.587322 8_2:+10483344 None:intergenic
CTAGTCCATCTGAAGCATAC+GGG 0.589626 8_2:+10483680 None:intergenic
GAAGACCATATGCATAAGTA+GGG 0.590733 8_2:+10483722 None:intergenic
AGAACGGCGGAACAAGGCGG+TGG 0.593953 8_2:+10486968 None:intergenic
ATCATCTTGCAAGAAAAGGA+TGG 0.594431 8_2:+10484625 None:intergenic
GTCGCTATTAATAAAAGATG+AGG 0.597656 8_2:-10482953 Msa1233630:three_prime_UTR
CATTGGCGATTGAACTAAGT+AGG 0.599237 8_2:-10484589 Msa1233630:CDS
GGAACTGGAAAAGGCAAAGT+GGG 0.599537 8_2:-10486529 Msa1233630:CDS
GAACTTGTAGAGGTCGGTCA+TGG 0.600852 8_2:-10483553 Msa1233630:CDS
CTTGCAGCCAAACATGGTTG+GGG 0.600907 8_2:-10484842 Msa1233630:CDS
TGAGTTGCAAACAAAGCTGA+TGG 0.602316 8_2:+10486315 None:intergenic
TTCATTGTGTCACGATAATG+TGG 0.604329 8_2:+10484244 None:intergenic
GTTGATGCAAAAGAATGTGT+TGG 0.605040 8_2:-10487087 Msa1233630:CDS
CTAAGTAGGCCACACCCTCA+AGG 0.605346 8_2:-10484575 Msa1233630:CDS
GTTTAAGATGCAAACTCGTG+TGG 0.607649 8_2:-10483506 Msa1233630:CDS
AGAAGATTCATGCCTGAGCA+GGG 0.609374 8_2:-10483370 Msa1233630:CDS
GAAACCGTCAATTACACCAC+CGG 0.610680 8_2:+10487034 None:intergenic
GGCAGGAAACCAGCTAGGAA+AGG 0.610843 8_2:-10485905 Msa1233630:intron
TATATCGAGAATTATCTGCA+AGG 0.612246 8_2:-10486391 Msa1233630:CDS
TTTCCGAACTGATGGTGAAG+CGG 0.613417 8_2:-10485275 Msa1233630:CDS
TATGGGCTGCTATTAAGACA+TGG 0.613774 8_2:-10483654 Msa1233630:CDS
GCTATTAATAAAAGATGAGG+AGG 0.615492 8_2:-10482950 Msa1233630:three_prime_UTR
AACAAATAGGCATCTTAGTG+TGG 0.616014 8_2:-10484293 Msa1233630:CDS
TGCTGAAGCAATCCATATGA+GGG 0.621259 8_2:+10483462 None:intergenic
TTTGGACAGTATCCGTATGG+AGG 0.621341 8_2:-10483421 Msa1233630:CDS
GAGGAAGGATTGACTTGCAG+AGG 0.621733 8_2:-10483031 Msa1233630:CDS
GTGCGCTCGCTCTATGAAGG+TGG 0.621984 8_2:-10485358 Msa1233630:CDS
TGGAAAGAACTTGTAGAGGT+CGG 0.622722 8_2:-10483559 Msa1233630:CDS
CACAATATAGCAATCAAACA+TGG 0.624714 8_2:+10482838 None:intergenic
GCCAGAGAGCCACAGAACGG+CGG 0.628448 8_2:+10486955 None:intergenic
ATGGGCTGCTATTAAGACAT+GGG 0.642500 8_2:-10483653 Msa1233630:CDS
CATAACATGACGATATACGT+AGG 0.643218 8_2:+10482909 None:intergenic
GGACCAAAACTATCACCTTG+AGG 0.648019 8_2:+10484560 None:intergenic
TTAACGATATATCCTCCATA+CGG 0.649622 8_2:+10483409 None:intergenic
AATGTGTTGGTTAATGCAGA+CGG 0.651002 8_2:-10484202 Msa1233630:CDS
ACCTTCCCTTACCCTCGAAG+GGG 0.651341 8_2:-10485935 Msa1233630:CDS
TGACTGATGATGAATTTGCA+AGG 0.653058 8_2:-10485102 Msa1233630:CDS
ATAAATACTAAGCATCCCCA+TGG 0.653984 8_2:-10487231 Msa1233630:five_prime_UTR
GATAGGCACCAAAAGGTGAA+GGG 0.655391 8_2:-10487119 Msa1233630:CDS
TTCTGATGAGCAATACCTTG+GGG 0.661690 8_2:-10483230 Msa1233630:CDS
TCTGCTTCATCCTTCTAGTG+AGG 0.662515 8_2:-10483050 Msa1233630:CDS
AATATGGAAAGAGTGGGTCG+TGG 0.664035 8_2:+10484693 None:intergenic
GACTGATGATGAATTTGCAA+GGG 0.664869 8_2:-10485101 Msa1233630:CDS
CATCACAAAATGTCATACCT+CGG 0.665067 8_2:-10485438 Msa1233630:CDS
TCAGCCAGAGAGCCACAGAA+CGG 0.665261 8_2:+10486952 None:intergenic
GAGCAGTGGATCATTCTGCA+TGG 0.669101 8_2:-10485126 Msa1233630:intron
ATTCTGGAAAGAACTTGTAG+AGG 0.670411 8_2:-10483563 Msa1233630:CDS
ACTGCAGCTCAAAGCCCCGG+TGG 0.677703 8_2:-10487050 Msa1233630:CDS
CCAAAAGGTGAAGGGAACTG+TGG 0.677832 8_2:-10487111 Msa1233630:CDS
TTTGAATGGGACAATGACAT+GGG 0.685221 8_2:-10486430 Msa1233630:CDS
GAGACACTGATGAATCGTAA+CGG 0.686774 8_2:-10483094 Msa1233630:CDS
GAAGTTGTTACCATCAACAA+CGG 0.700552 8_2:+10486920 None:intergenic
AGCAAGTTCATCGTACTCGG+GGG 0.701125 8_2:+10483345 None:intergenic
CACAGAACGGCGGAACAAGG+CGG 0.707322 8_2:+10486965 None:intergenic
CCTTCCCTTACCCTCGAAGG+GGG 0.709915 8_2:-10485934 Msa1233630:CDS
TAACATGACGATATACGTAG+GGG 0.724144 8_2:+10482911 None:intergenic
AACATGACGATATACGTAGG+GGG 0.738326 8_2:+10482912 None:intergenic
ATCGAGAATTATCTGCAAGG+CGG 0.739375 8_2:-10486388 Msa1233630:CDS
TGAAGCAATCCATATGAGGG+TGG 0.741108 8_2:+10483465 None:intergenic
ACTTGAAGAATGCAACGTGG+TGG 0.747843 8_2:-10483528 Msa1233630:CDS
GTAACTATAGATCTCAACCG+AGG 0.758551 8_2:+10485421 None:intergenic
AACCGTCAATTACACCACCG+GGG 0.780189 8_2:+10487036 None:intergenic
GCTTGTGTCTTGTAACCATG+GGG 0.785521 8_2:+10487216 None:intergenic
GTGACTTGAAGAATGCAACG+TGG 0.847242 8_2:-10483531 Msa1233630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAATGTCAAAATT+TGG + chr8_2:10483480-10483499 None:intergenic 10.0%
!!! AAATTTTGACATTTTTATAT+AGG - chr8_2:10483479-10483498 Msa1233630:CDS 10.0%
!!! ATCAATATCTTTTTAAAAAA+TGG + chr8_2:10485987-10486006 None:intergenic 10.0%
!! TATTATATTTCAAGAAACTT+TGG - chr8_2:10484189-10484208 Msa1233630:CDS 15.0%
!!! AAAAAATGACTAGTATTTTT+AGG + chr8_2:10487237-10487256 None:intergenic 15.0%
!! TAGTATTTATAGTAGTTGAT+AGG + chr8_2:10482788-10482807 None:intergenic 20.0%
!! TAAATGTATTACACTATCTT+TGG + chr8_2:10482853-10482872 None:intergenic 20.0%
!! TATATATATATTGTGATGTC+CGG - chr8_2:10483151-10483170 Msa1233630:CDS 20.0%
!!! TTAATATTTACTCATTGACT+CGG + chr8_2:10483292-10483311 None:intergenic 20.0%
!! TTATACTAATGTCAATCTAA+TGG + chr8_2:10483386-10483405 None:intergenic 20.0%
!!! GTATAAAGAACATCAAATTT+TGG - chr8_2:10483400-10483419 Msa1233630:CDS 20.0%
!!! TTTCAGTATTGAATTTGAAT+GGG - chr8_2:10483586-10483605 Msa1233630:CDS 20.0%
!! TTGGCAAAAATTAATTGATA+TGG - chr8_2:10484208-10484227 Msa1233630:CDS 20.0%
!! TAATGTAATTAAATCAGTGA+TGG - chr8_2:10484347-10484366 Msa1233630:intron 20.0%
!!! ATTTTTAATTAACCACATCT+TGG - chr8_2:10485079-10485098 Msa1233630:CDS 20.0%
!!! TAAATTTTATTTTGTGGAAC+AGG - chr8_2:10485279-10485298 Msa1233630:CDS 20.0%
!!! GTATGAACAGTTTATTATTT+TGG + chr8_2:10485309-10485328 None:intergenic 20.0%
!! AAATAATAAACTGTTCATAC+TGG - chr8_2:10485309-10485328 Msa1233630:CDS 20.0%
!! GGATTTAAACTATGTATTAT+AGG + chr8_2:10486158-10486177 None:intergenic 20.0%
!! TTGAAATAAAATAATTGGGA+AGG + chr8_2:10486225-10486244 None:intergenic 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG + chr8_2:10487224-10487243 None:intergenic 20.0%
! ATATATATATTGTGATGTCC+GGG - chr8_2:10483152-10483171 Msa1233630:CDS 25.0%
! ATATATATATGTTCGAATCC+CGG + chr8_2:10483173-10483192 None:intergenic 25.0%
!! TGACATTTTTATATAGGAAC+TGG - chr8_2:10483485-10483504 Msa1233630:CDS 25.0%
!! TTTTATATAGGAACTGGAAA+AGG - chr8_2:10483491-10483510 Msa1233630:CDS 25.0%
!! CTTTCAGTATTGAATTTGAA+TGG - chr8_2:10483585-10483604 Msa1233630:CDS 25.0%
! TATAGATATTCTTACCTTGT+TGG + chr8_2:10483786-10483805 None:intergenic 25.0%
! TACAAAATTGTAGTCATTGA+TGG + chr8_2:10483884-10483903 None:intergenic 25.0%
!! TATATACCTTGAATCACTTT+TGG + chr8_2:10484797-10484816 None:intergenic 25.0%
! AAATATATAGAGAAAGCTCA+TGG - chr8_2:10484857-10484876 Msa1233630:CDS 25.0%
! AAAATAAATGTACCAAGATG+TGG + chr8_2:10485094-10485113 None:intergenic 25.0%
!!! CATCTTGGTACATTTATTTT+AGG - chr8_2:10485094-10485113 Msa1233630:CDS 25.0%
!!! TGTGGCTAAATTTTATTTTG+TGG - chr8_2:10485273-10485292 Msa1233630:CDS 25.0%
!!! GCATTTATTTTCCTCAAATA+TGG + chr8_2:10485355-10485374 None:intergenic 25.0%
! ATAAACGAAATTCATACCAA+TGG + chr8_2:10485603-10485622 None:intergenic 25.0%
!!! TTTTGATTAGATCATTAGGT+AGG + chr8_2:10485940-10485959 None:intergenic 25.0%
! TACCTAATGATCTAATCAAA+AGG - chr8_2:10485939-10485958 Msa1233630:CDS 25.0%
!!! TACCTTTTGATTAGATCATT+AGG + chr8_2:10485944-10485963 None:intergenic 25.0%
! ATCTCAAATATAATACCATG+TGG - chr8_2:10486005-10486024 Msa1233630:CDS 25.0%
!!! GTTAAAGTTTGTTAGTATGT+AGG + chr8_2:10486122-10486141 None:intergenic 25.0%
! TATATAGAAATGTCTCTGAT+GGG + chr8_2:10486179-10486198 None:intergenic 25.0%
!!! GTATTTTTAGGTCCAAAATT+AGG + chr8_2:10487225-10487244 None:intergenic 25.0%
! AATGACTTATAATGCAAGAA+AGG + chr8_2:10487260-10487279 None:intergenic 25.0%
AGCATTAAAGATGAGTTCAT+TGG - chr8_2:10482873-10482892 Msa1233630:three_prime_UTR 30.0%
!! TAATGTCAATCTAATGGACT+CGG + chr8_2:10483380-10483399 None:intergenic 30.0%
!! TTTTGTTTATCTCCCAATGT+TGG + chr8_2:10483563-10483582 None:intergenic 30.0%
TATATCGAGAATTATCTGCA+AGG - chr8_2:10483638-10483657 Msa1233630:CDS 30.0%
!! CATTGATGGTATCAAGTTTT+TGG + chr8_2:10483870-10483889 None:intergenic 30.0%
TTACGATGTCTACAATGATT+TGG - chr8_2:10484018-10484037 Msa1233630:intron 30.0%
TACGATGTCTACAATGATTT+GGG - chr8_2:10484019-10484038 Msa1233630:intron 30.0%
AGTCTTAGTAAACAACATCA+GGG + chr8_2:10484288-10484307 None:intergenic 30.0%
AAGTCTTAGTAAACAACATC+AGG + chr8_2:10484289-10484308 None:intergenic 30.0%
! GTTTACTAAGACTTGCTTAA+TGG - chr8_2:10484295-10484314 Msa1233630:CDS 30.0%
TTCCAAGAGATGAATCATTT+GGG - chr8_2:10484525-10484544 Msa1233630:CDS 30.0%
!! TCTTCAAAAGTGTTTAACTC+AGG + chr8_2:10484650-10484669 None:intergenic 30.0%
AGTTCACTTAGTATTTCAGT+AGG + chr8_2:10484707-10484726 None:intergenic 30.0%
! TGAAATATTTTGCTAGGACT+AGG + chr8_2:10484832-10484851 None:intergenic 30.0%
! TTTGCGTGAAATATTTTGCT+AGG + chr8_2:10484838-10484857 None:intergenic 30.0%
AAATTTCTTACTATGAGCAG+TGG - chr8_2:10484889-10484908 Msa1233630:CDS 30.0%
ACACATCATCAAAAAACTCA+CGG - chr8_2:10484973-10484992 Msa1233630:intron 30.0%
TATAAACATGGCATGAAAAG+TGG + chr8_2:10485059-10485078 None:intergenic 30.0%
GGTATTATTACCAAAGAGTT+GGG + chr8_2:10485147-10485166 None:intergenic 30.0%
TGGTATTATTACCAAAGAGT+TGG + chr8_2:10485148-10485167 None:intergenic 30.0%
CTAAACAAATAACTCAACTG+TGG - chr8_2:10485255-10485274 Msa1233630:CDS 30.0%
ATTTACAATTACGTAAGCCT+TGG + chr8_2:10485554-10485573 None:intergenic 30.0%
! ATTTTTCTACAATGTGTGAC+AGG - chr8_2:10485675-10485694 Msa1233630:intron 30.0%
GAAGCAGAAGTTTATGAATA+GGG + chr8_2:10485766-10485785 None:intergenic 30.0%
TTATTGAGTCAACTTTCTTG+TGG - chr8_2:10485852-10485871 Msa1233630:intron 30.0%
TATTGAGTCAACTTTCTTGT+GGG - chr8_2:10485853-10485872 Msa1233630:intron 30.0%
!! TTCTCTACTAGCTCTATATA+CGG + chr8_2:10486064-10486083 None:intergenic 30.0%
!! AGGTAGTTTGTTGTTTGAAT+TGG + chr8_2:10486102-10486121 None:intergenic 30.0%
GTATATAGAAATGTCTCTGA+TGG + chr8_2:10486180-10486199 None:intergenic 30.0%
!! TTCAGATGGACTAGAAATAT+GGG - chr8_2:10486358-10486377 Msa1233630:CDS 30.0%
TTAACGATATATCCTCCATA+CGG + chr8_2:10486623-10486642 None:intergenic 30.0%
!! ATGAATCTTCTGCTTTTAGT+TGG + chr8_2:10486650-10486669 None:intergenic 30.0%
ATTACCAAAAGACCTATTTG+AGG - chr8_2:10486711-10486730 Msa1233630:intron 30.0%
!! TCAGTAAGAGTATCATTCTT+GGG + chr8_2:10486746-10486765 None:intergenic 30.0%
!! AACCTTTTAAAGGACTCTTT+TGG + chr8_2:10486863-10486882 None:intergenic 30.0%
! AAAGAGTCCTTTAAAAGGTT+TGG - chr8_2:10486863-10486882 Msa1233630:intron 30.0%
! CTTCTTTCCAAACCTTTTAA+AGG + chr8_2:10486873-10486892 None:intergenic 30.0%
TTGAGCAAAAACTCATTCAA+AGG - chr8_2:10486903-10486922 Msa1233630:intron 30.0%
GTCGCTATTAATAAAAGATG+AGG - chr8_2:10487076-10487095 Msa1233630:CDS 30.0%
GCTATTAATAAAAGATGAGG+AGG - chr8_2:10487079-10487098 Msa1233630:CDS 30.0%
ATAACATGACGATATACGTA+GGG + chr8_2:10487122-10487141 None:intergenic 30.0%
CACAATATAGCAATCAAACA+TGG + chr8_2:10487194-10487213 None:intergenic 30.0%
! TGTGTGTTATACCCTAATTT+TGG - chr8_2:10487210-10487229 Msa1233630:five_prime_UTR 30.0%
!! TATAGTAGTTGATAGGTGCA+AGG + chr8_2:10482781-10482800 None:intergenic 35.0%
ATAAATACTAAGCATCCCCA+TGG - chr8_2:10482798-10482817 Msa1233630:three_prime_UTR 35.0%
TGGTGATAAGTCTCTTTGAT+AGG - chr8_2:10482893-10482912 Msa1233630:three_prime_UTR 35.0%
GTTGATGCAAAAGAATGTGT+TGG - chr8_2:10482942-10482961 Msa1233630:three_prime_UTR 35.0%
GAAGTTGTTACCATCAACAA+CGG + chr8_2:10483112-10483131 None:intergenic 35.0%
GTTCAACAGAATTGAGCTAT+GGG - chr8_2:10483236-10483255 Msa1233630:CDS 35.0%
AATCGCAATAGACAAAAGTG+AGG + chr8_2:10483331-10483350 None:intergenic 35.0%
!! AATGTCAATCTAATGGACTC+GGG + chr8_2:10483379-10483398 None:intergenic 35.0%
TATTACCTCCTTACCAACAT+TGG - chr8_2:10483547-10483566 Msa1233630:CDS 35.0%
ATTACCTCCTTACCAACATT+GGG - chr8_2:10483548-10483567 Msa1233630:CDS 35.0%
TTTATCTCCCAATGTTGGTA+AGG + chr8_2:10483558-10483577 None:intergenic 35.0%
ATTTGAATGGGACAATGACA+TGG - chr8_2:10483598-10483617 Msa1233630:CDS 35.0%
TTTGAATGGGACAATGACAT+GGG - chr8_2:10483599-10483618 Msa1233630:CDS 35.0%
TTCTCGATATAAAAAGCTCC+TGG + chr8_2:10483629-10483648 None:intergenic 35.0%
TCTTGTCTGTAGTACACTAA+TGG + chr8_2:10483935-10483954 None:intergenic 35.0%
GAAGAACTGAAGACTTTAAG+AGG - chr8_2:10483953-10483972 Msa1233630:intron 35.0%
!!! CAGTGATGGATGACTAATTT+TGG - chr8_2:10484361-10484380 Msa1233630:intron 35.0%
! GCTTGTGATTCTAAAGAGTT+TGG - chr8_2:10484424-10484443 Msa1233630:intron 35.0%
CAAATGATTCATCTCTTGGA+AGG + chr8_2:10484526-10484545 None:intergenic 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_2:10484524-10484543 Msa1233630:CDS 35.0%
CATCACAAAATGTCATACCT+CGG - chr8_2:10484591-10484610 Msa1233630:CDS 35.0%
GTTCCTTGAACAATGGTATT+GGG + chr8_2:10484733-10484752 None:intergenic 35.0%
AGTTCCTTGAACAATGGTAT+TGG + chr8_2:10484734-10484753 None:intergenic 35.0%
!! ATACCTTGAATCACTTTTGG+TGG + chr8_2:10484794-10484813 None:intergenic 35.0%
! TGACTGATGATGAATTTGCA+AGG - chr8_2:10484927-10484946 Msa1233630:intron 35.0%
! GACTGATGATGAATTTGCAA+GGG - chr8_2:10484928-10484947 Msa1233630:intron 35.0%
!!! GTGAGTTTTTTGATGATGTG+TGG + chr8_2:10484974-10484993 None:intergenic 35.0%
AAGTTAGATACCCAACTCTT+TGG - chr8_2:10485134-10485153 Msa1233630:intron 35.0%
! CTGCAAGTTTTCTTTGGTTA+TGG + chr8_2:10485174-10485193 None:intergenic 35.0%
TCCTCAAATATGGAAAGAGT+GGG + chr8_2:10485345-10485364 None:intergenic 35.0%
TTCCTCAAATATGGAAAGAG+TGG + chr8_2:10485346-10485365 None:intergenic 35.0%
AATAAATGCAACCGAGACAA+AGG - chr8_2:10485366-10485385 Msa1233630:CDS 35.0%
ATCATCTTGCAAGAAAAGGA+TGG + chr8_2:10485407-10485426 None:intergenic 35.0%
! ATCCTTTTCTTGCAAGATGA+TGG - chr8_2:10485406-10485425 Msa1233630:CDS 35.0%
TTCCATCATCTTGCAAGAAA+AGG + chr8_2:10485411-10485430 None:intergenic 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG - chr8_2:10485521-10485540 Msa1233630:CDS 35.0%
! CTATTTGTTGCTATGACGAA+TGG + chr8_2:10485725-10485744 None:intergenic 35.0%
CATTCGTCATAGCAACAAAT+AGG - chr8_2:10485723-10485742 Msa1233630:intron 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_2:10485736-10485755 Msa1233630:intron 35.0%
GGAAGCAGAAGTTTATGAAT+AGG + chr8_2:10485767-10485786 None:intergenic 35.0%
TTCATTGTGTCACGATAATG+TGG + chr8_2:10485788-10485807 None:intergenic 35.0%
!! AATGTGTTGGTTAATGCAGA+CGG - chr8_2:10485827-10485846 Msa1233630:intron 35.0%
ATTGAGTCAACTTTCTTGTG+GGG - chr8_2:10485854-10485873 Msa1233630:intron 35.0%
!! GTATGCTTTGGAAATGTCTT+CGG - chr8_2:10485880-10485899 Msa1233630:intron 35.0%
GAAGACCATATGCATAAGTA+GGG + chr8_2:10486310-10486329 None:intergenic 35.0%
!! CTTCAGATGGACTAGAAATA+TGG - chr8_2:10486357-10486376 Msa1233630:CDS 35.0%
! ATTCTGGAAAGAACTTGTAG+AGG - chr8_2:10486466-10486485 Msa1233630:CDS 35.0%
! CTTCATGCAGCAGTTAATTT+TGG - chr8_2:10486590-10486609 Msa1233630:intron 35.0%
! AATTTTGGACAGTATCCGTA+TGG - chr8_2:10486605-10486624 Msa1233630:intron 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_2:10486646-10486665 None:intergenic 35.0%
! TTGTCCTCAAATAGGTCTTT+TGG + chr8_2:10486718-10486737 None:intergenic 35.0%
!! GTCAGTAAGAGTATCATTCT+TGG + chr8_2:10486747-10486766 None:intergenic 35.0%
!! TACTGACTTGACCATTATAG+AGG - chr8_2:10486760-10486779 Msa1233630:intron 35.0%
AGCCAAAAGAGTCCTTTAAA+AGG - chr8_2:10486858-10486877 Msa1233630:intron 35.0%
! TTTTAGATGGAGACACTGTT+GGG + chr8_2:10487028-10487047 None:intergenic 35.0%
! TTTTTAGATGGAGACACTGT+TGG + chr8_2:10487029-10487048 None:intergenic 35.0%
!!! CCACGACGATTTTTTTTAGA+TGG + chr8_2:10487041-10487060 None:intergenic 35.0%
CCATCTAAAAAAAATCGTCG+TGG - chr8_2:10487038-10487057 Msa1233630:CDS 35.0%
TAACATGACGATATACGTAG+GGG + chr8_2:10487121-10487140 None:intergenic 35.0%
CATAACATGACGATATACGT+AGG + chr8_2:10487123-10487142 None:intergenic 35.0%
AGCTTGTGTCTTGTAACCAT+GGG + chr8_2:10482817-10482836 None:intergenic 40.0%
AAGCTTGTGTCTTGTAACCA+TGG + chr8_2:10482818-10482837 None:intergenic 40.0%
TCTCTTTGATAGGCACCAAA+AGG - chr8_2:10482903-10482922 Msa1233630:three_prime_UTR 40.0%
ATTAGTGCTACCGTTGTTGA+TGG - chr8_2:10483099-10483118 Msa1233630:CDS 40.0%
CGTTCAACAGAATTGAGCTA+TGG - chr8_2:10483235-10483254 Msa1233630:CDS 40.0%
! GCTATGGGTTAAAGAGTTGA+AGG - chr8_2:10483251-10483270 Msa1233630:CDS 40.0%
GGGTTAAAGAGTTGAAGGTT+TGG - chr8_2:10483256-10483275 Msa1233630:CDS 40.0%
ATCGAGAATTATCTGCAAGG+CGG - chr8_2:10483641-10483660 Msa1233630:CDS 40.0%
CTTGAAGATGTTCCAAACCA+TGG - chr8_2:10483689-10483708 Msa1233630:CDS 40.0%
AAACAAAGCTGATGGTTCCA+TGG + chr8_2:10483709-10483728 None:intergenic 40.0%
TGAGTTGCAAACAAAGCTGA+TGG + chr8_2:10483717-10483736 None:intergenic 40.0%
!! TCAGCTTTGTTTGCAACTCA+TGG - chr8_2:10483717-10483736 Msa1233630:CDS 40.0%
!! CAGCTTTGTTTGCAACTCAT+GGG - chr8_2:10483718-10483737 Msa1233630:CDS 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_2:10483769-10483788 Msa1233630:intron 40.0%
! CTGAAGACTTTAAGAGGAGA+TGG - chr8_2:10483959-10483978 Msa1233630:intron 40.0%
! ACTTTAAGAGGAGATGGAAC+TGG - chr8_2:10483965-10483984 Msa1233630:intron 40.0%
GAGTTATAACCTTTCCTAGC+TGG + chr8_2:10484136-10484155 None:intergenic 40.0%
TGCCCAAATGATTCATCTCT+TGG + chr8_2:10484530-10484549 None:intergenic 40.0%
GTAACTATAGATCTCAACCG+AGG + chr8_2:10484611-10484630 None:intergenic 40.0%
TAGCCCAATACCATTGTTCA+AGG - chr8_2:10484727-10484746 Msa1233630:CDS 40.0%
CGGAAAAGTTCCTTGAACAA+TGG + chr8_2:10484740-10484759 None:intergenic 40.0%
! AAGGAACTTTTCCGAACTGA+TGG - chr8_2:10484746-10484765 Msa1233630:intron 40.0%
!!! TTTTGGTGGTGGAAACCTAA+GGG + chr8_2:10484780-10484799 None:intergenic 40.0%
!! GTATCTAACTTGCTCTTTGG+TGG + chr8_2:10485125-10485144 None:intergenic 40.0%
!! TGGGTATCTAACTTGCTCTT+TGG + chr8_2:10485128-10485147 None:intergenic 40.0%
! GTTTTCTTTGGTTATGGTGC+TGG + chr8_2:10485168-10485187 None:intergenic 40.0%
! GTTTGGCTGCAAGTTTTCTT+TGG + chr8_2:10485180-10485199 None:intergenic 40.0%
AGAAAACTTGCAGCCAAACA+TGG - chr8_2:10485181-10485200 Msa1233630:intron 40.0%
ACCCACTCTTTCCATATTTG+AGG - chr8_2:10485341-10485360 Msa1233630:CDS 40.0%
!! AAGGATGGTTCTAGTAGCAT+AGG + chr8_2:10485392-10485411 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_2:10485423-10485442 Msa1233630:CDS 40.0%
CTACTTAGTTCAATCGCCAA+TGG + chr8_2:10485442-10485461 None:intergenic 40.0%
CATTGGCGATTGAACTAAGT+AGG - chr8_2:10485440-10485459 Msa1233630:CDS 40.0%
GACCAAAACTATCACCTTGA+GGG + chr8_2:10485471-10485490 None:intergenic 40.0%
GGCAAGTAAACATTGCTAAC+AGG + chr8_2:10485493-10485512 None:intergenic 40.0%
!! ATCACCAACTTGTTAGCCAT+TGG - chr8_2:10485584-10485603 Msa1233630:intron 40.0%
CATACCAATGGCTAACAAGT+TGG + chr8_2:10485591-10485610 None:intergenic 40.0%
TGCATTAGCACGAAATGTGT+TGG - chr8_2:10485814-10485833 Msa1233630:intron 40.0%
AATGTCTTCGGTGGTTTACA+AGG - chr8_2:10485892-10485911 Msa1233630:intron 40.0%
TTCGGTGGTTTACAAGGATT+GGG - chr8_2:10485898-10485917 Msa1233630:intron 40.0%
TTCCTTTGCTTGTTCTCTAG+AGG - chr8_2:10486269-10486288 Msa1233630:CDS 40.0%
CGAAGACCATATGCATAAGT+AGG + chr8_2:10486311-10486330 None:intergenic 40.0%
TGGTCTTCGACTTCTAATAG+AGG - chr8_2:10486322-10486341 Msa1233630:CDS 40.0%
! TCTAGTCCATCTGAAGCATA+CGG + chr8_2:10486353-10486372 None:intergenic 40.0%
! TATGGGCTGCTATTAAGACA+TGG - chr8_2:10486375-10486394 Msa1233630:CDS 40.0%
! ATGGGCTGCTATTAAGACAT+GGG - chr8_2:10486376-10486395 Msa1233630:CDS 40.0%
ATTCTGAACTCCAAGCATTC+TGG - chr8_2:10486450-10486469 Msa1233630:CDS 40.0%
CAAGTTCTTTCCAGAATGCT+TGG + chr8_2:10486463-10486482 None:intergenic 40.0%
TGGAAAGAACTTGTAGAGGT+CGG - chr8_2:10486470-10486489 Msa1233630:CDS 40.0%
! GTTTAAGATGCAAACTCGTG+TGG - chr8_2:10486523-10486542 Msa1233630:CDS 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_2:10486570-10486589 None:intergenic 40.0%
TTAGCAAGTTCATCGTACTC+GGG + chr8_2:10486689-10486708 None:intergenic 40.0%
CTTAGCAAGTTCATCGTACT+CGG + chr8_2:10486690-10486709 None:intergenic 40.0%
CCTAGACAAGACCTCTATAA+TGG + chr8_2:10486774-10486793 None:intergenic 40.0%
! CCATTATAGAGGTCTTGTCT+AGG - chr8_2:10486771-10486790 Msa1233630:intron 40.0%
CTTCTGATGAGCAATACCTT+GGG - chr8_2:10486798-10486817 Msa1233630:intron 40.0%
TTCTGATGAGCAATACCTTG+GGG - chr8_2:10486799-10486818 Msa1233630:intron 40.0%
AGAGAATTGAAGGTGATCTC+TGG - chr8_2:10486822-10486841 Msa1233630:intron 40.0%
GAGACACTGATGAATCGTAA+CGG - chr8_2:10486935-10486954 Msa1233630:CDS 40.0%
AACATGACGATATACGTAGG+GGG + chr8_2:10487120-10487139 None:intergenic 40.0%
GCTTGTGTCTTGTAACCATG+GGG + chr8_2:10482816-10482835 None:intergenic 45.0%
TGATAGGCACCAAAAGGTGA+AGG - chr8_2:10482909-10482928 Msa1233630:three_prime_UTR 45.0%
GATAGGCACCAAAAGGTGAA+GGG - chr8_2:10482910-10482929 Msa1233630:three_prime_UTR 45.0%
AAACCGTCAATTACACCACC+GGG + chr8_2:10482997-10483016 None:intergenic 45.0%
GAAACCGTCAATTACACCAC+CGG + chr8_2:10482998-10483017 None:intergenic 45.0%
! GACGGTTTCTTCGATTTTGC+TGG - chr8_2:10483009-10483028 Msa1233630:CDS 45.0%
!! GATTTTGCTGGTGATGTTGC+CGG - chr8_2:10483021-10483040 Msa1233630:CDS 45.0%
TCACACACACTAGCATGCAA+TGG - chr8_2:10483201-10483220 Msa1233630:CDS 45.0%
CACACACACTAGCATGCAAT+GGG - chr8_2:10483202-10483221 Msa1233630:CDS 45.0%
AGGAACTGGAAAAGGCAAAG+TGG - chr8_2:10483499-10483518 Msa1233630:CDS 45.0%
GGAACTGGAAAAGGCAAAGT+GGG - chr8_2:10483500-10483519 Msa1233630:CDS 45.0%
! ATCTCCCAATGTTGGTAAGG+AGG + chr8_2:10483555-10483574 None:intergenic 45.0%
CTTCAAGAGTCAAGCTCACA+AGG + chr8_2:10483676-10483695 None:intergenic 45.0%
AAGCTGATGGTTCCATGGTT+TGG + chr8_2:10483704-10483723 None:intergenic 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_2:10483917-10483936 None:intergenic 45.0%
CTGTAGTACACTAATGGAGC+TGG + chr8_2:10483929-10483948 None:intergenic 45.0%
! AACTGGAGAGCGTAAGGAAT+GGG - chr8_2:10483982-10484001 Msa1233630:intron 45.0%
TCACTTCGACTCTCACTCTT+AGG + chr8_2:10484494-10484513 None:intergenic 45.0%
! TTTCCGAACTGATGGTGAAG+CGG - chr8_2:10484754-10484773 Msa1233630:intron 45.0%
!!! CTTTTGGTGGTGGAAACCTA+AGG + chr8_2:10484781-10484800 None:intergenic 45.0%
!! CCTTGAATCACTTTTGGTGG+TGG + chr8_2:10484791-10484810 None:intergenic 45.0%
CCACCACCAAAAGTGATTCA+AGG - chr8_2:10484788-10484807 Msa1233630:intron 45.0%
TTTGCAAGGGAGATGATTGC+TGG - chr8_2:10484941-10484960 Msa1233630:intron 45.0%
AACTTGCAGCCAAACATGGT+TGG - chr8_2:10485185-10485204 Msa1233630:intron 45.0%
ACTTGCAGCCAAACATGGTT+GGG - chr8_2:10485186-10485205 Msa1233630:intron 45.0%
AATATGGAAAGAGTGGGTCG+TGG + chr8_2:10485339-10485358 None:intergenic 45.0%
AGTAGCATAGGCCTTTGTCT+CGG + chr8_2:10485380-10485399 None:intergenic 45.0%
AAACTATCACCTTGAGGGTG+TGG + chr8_2:10485466-10485485 None:intergenic 45.0%
! CACCCTCAAGGTGATAGTTT+TGG - chr8_2:10485466-10485485 Msa1233630:CDS 45.0%
GGACCAAAACTATCACCTTG+AGG + chr8_2:10485472-10485491 None:intergenic 45.0%
AGCTTCAACACCTTCACTTG+CGG + chr8_2:10485515-10485534 None:intergenic 45.0%
! TTCAATTTGGCTCCTTGCCA+AGG - chr8_2:10485534-10485553 Msa1233630:CDS 45.0%
CAATTACGTAAGCCTTGGCA+AGG + chr8_2:10485549-10485568 None:intergenic 45.0%
! CTTGTGGGGAAAGTATGCTT+TGG - chr8_2:10485868-10485887 Msa1233630:intron 45.0%
!! TGCTTTGGAAATGTCTTCGG+TGG - chr8_2:10485883-10485902 Msa1233630:intron 45.0%
CTTCGGTGGTTTACAAGGAT+TGG - chr8_2:10485897-10485916 Msa1233630:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_2:10485914-10485933 Msa1233630:CDS 45.0%
ACCATGTGGTCTCAGTTCAA+TGG - chr8_2:10486019-10486038 Msa1233630:CDS 45.0%
ACCATTGAACTGAGACCACA+TGG + chr8_2:10486023-10486042 None:intergenic 45.0%
! CTCCTCTAGAGAACAAGCAA+AGG + chr8_2:10486274-10486293 None:intergenic 45.0%
! TTGCTTGTTCTCTAGAGGAG+TGG - chr8_2:10486274-10486293 Msa1233630:CDS 45.0%
GAGGACCCTACTTATGCATA+TGG - chr8_2:10486302-10486321 Msa1233630:CDS 45.0%
! CTAGTCCATCTGAAGCATAC+GGG + chr8_2:10486352-10486371 None:intergenic 45.0%
GTGACTTGAAGAATGCAACG+TGG - chr8_2:10486498-10486517 Msa1233630:CDS 45.0%
ACTTGAAGAATGCAACGTGG+TGG - chr8_2:10486501-10486520 Msa1233630:CDS 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_2:10486567-10486586 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_2:10486571-10486590 None:intergenic 45.0%
TTTGGACAGTATCCGTATGG+AGG - chr8_2:10486608-10486627 Msa1233630:intron 45.0%
AGAAGATTCATGCCTGAGCA+GGG - chr8_2:10486659-10486678 Msa1233630:intron 45.0%
TAGCAAGTTCATCGTACTCG+GGG + chr8_2:10486688-10486707 None:intergenic 45.0%
!! CGAGTACGATGAACTTGCTA+AGG - chr8_2:10486688-10486707 Msa1233630:intron 45.0%
GGGAGTGATTGTCCTCAAAT+AGG + chr8_2:10486726-10486745 None:intergenic 45.0%
GCTTCTGATGAGCAATACCT+TGG - chr8_2:10486797-10486816 Msa1233630:intron 45.0%
TACCTTGGGGAGAGAATTGA+AGG - chr8_2:10486812-10486831 Msa1233630:intron 45.0%
! AGAGTGTAAGGCATCTTCAC+TGG + chr8_2:10486962-10486981 None:intergenic 45.0%
GAAGGATGAAGCAGAGTGTA+AGG + chr8_2:10486974-10486993 None:intergenic 45.0%
TCTGCTTCATCCTTCTAGTG+AGG - chr8_2:10486979-10486998 Msa1233630:CDS 45.0%
CTTCATCCTTCTAGTGAGGA+AGG - chr8_2:10486983-10487002 Msa1233630:CDS 45.0%
GTCAATCCTTCCTCACTAGA+AGG + chr8_2:10486992-10487011 None:intergenic 45.0%
!! TTAATTAAAAATTATAAACA+TGG + chr8_2:10485071-10485090 None:intergenic 5.0%
!! AAAATTGAAATAAAATAATT+GGG + chr8_2:10486229-10486248 None:intergenic 5.0%
!! AAAAATTGAAATAAAATAAT+TGG + chr8_2:10486230-10486249 None:intergenic 5.0%
! CCACAGTTCCCTTCACCTTT+TGG + chr8_2:10482921-10482940 None:intergenic 50.0%
CCAAAAGGTGAAGGGAACTG+TGG - chr8_2:10482918-10482937 Msa1233630:three_prime_UTR 50.0%
AACCGTCAATTACACCACCG+GGG + chr8_2:10482996-10483015 None:intergenic 50.0%
GGCGCTGTCAAGTACATTAC+CGG + chr8_2:10483043-10483062 None:intergenic 50.0%
ACACACTAGCATGCAATGGG+CGG - chr8_2:10483205-10483224 Msa1233630:CDS 50.0%
GACAATGACATGGGAACTCC+AGG - chr8_2:10483608-10483627 Msa1233630:CDS 50.0%
GAGCTGGTGTTTCACTTGGA+AGG + chr8_2:10483913-10483932 None:intergenic 50.0%
! AGATGGAACTGGAGAGCGTA+AGG - chr8_2:10483976-10483995 Msa1233630:intron 50.0%
! GAACTGGAGAGCGTAAGGAA+TGG - chr8_2:10483981-10484000 Msa1233630:intron 50.0%
GCCTGACAAGAACGCTAGTT+TGG - chr8_2:10484045-10484064 Msa1233630:intron 50.0%
GCCAAACTAGCGTTCTTGTC+AGG + chr8_2:10484049-10484068 None:intergenic 50.0%
! AGTTTGGCTCGTCCTGTTGT+TGG - chr8_2:10484061-10484080 Msa1233630:intron 50.0%
GTGCTAGATCCTCCAACAAC+AGG + chr8_2:10484076-10484095 None:intergenic 50.0%
! TTTCCTAGCTGGTTTCCTGC+CGG + chr8_2:10484125-10484144 None:intergenic 50.0%
GAGCAGTGGATCATTCTGCA+TGG - chr8_2:10484903-10484922 Msa1233630:CDS 50.0%
CTTGCAGCCAAACATGGTTG+GGG - chr8_2:10485187-10485206 Msa1233630:intron 50.0%
ACAGTGACCCCAACCATGTT+TGG + chr8_2:10485197-10485216 None:intergenic 50.0%
GTTTACTTGCCCGCAAGTGA+AGG - chr8_2:10485502-10485521 Msa1233630:CDS 50.0%
GCTTCAACACCTTCACTTGC+GGG + chr8_2:10485514-10485533 None:intergenic 50.0%
GACTACCCGTATGCTTCAGA+TGG - chr8_2:10486344-10486363 Msa1233630:CDS 50.0%
GAACTTGTAGAGGTCGGTCA+TGG - chr8_2:10486476-10486495 Msa1233630:CDS 50.0%
AAGCTTGCACCACCCTCATA+TGG - chr8_2:10486555-10486574 Msa1233630:intron 50.0%
CAGAAGATTCATGCCTGAGC+AGG - chr8_2:10486658-10486677 Msa1233630:intron 50.0%
AGCAAGTTCATCGTACTCGG+GGG + chr8_2:10486687-10486706 None:intergenic 50.0%
CACCTTCAATTCTCTCCCCA+AGG + chr8_2:10486817-10486836 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_2:10486998-10487017 Msa1233630:CDS 50.0%
ACGATATACGTAGGGGGTGA+GGG + chr8_2:10487114-10487133 None:intergenic 50.0%
AGCCCCGGTGGTGTAATTGA+CGG - chr8_2:10482991-10483010 Msa1233630:exon 55.0%
TCAGCCAGAGAGCCACAGAA+CGG + chr8_2:10483080-10483099 None:intergenic 55.0%
CACACTAGCATGCAATGGGC+GGG - chr8_2:10483206-10483225 Msa1233630:CDS 55.0%
! TAGCATGCAATGGGCGGGTT+GGG - chr8_2:10483211-10483230 Msa1233630:CDS 55.0%
! TTGGCTCGTCCTGTTGTTGG+AGG - chr8_2:10484064-10484083 Msa1233630:intron 55.0%
CACCTTCCCTTACCCTCGAA+GGG - chr8_2:10484093-10484112 Msa1233630:CDS 55.0%
ACCTTCCCTTACCCTCGAAG+GGG - chr8_2:10484094-10484113 Msa1233630:CDS 55.0%
TTCTCCCCCTTCGAGGGTAA+GGG + chr8_2:10484102-10484121 None:intergenic 55.0%
GGCAGGAAACCAGCTAGGAA+AGG - chr8_2:10484124-10484143 Msa1233630:CDS 55.0%
GATGTGCGCTCGCTCTATGA+AGG - chr8_2:10484668-10484687 Msa1233630:CDS 55.0%
GGTTGGGGTCACTGTAGAAC+AGG - chr8_2:10485202-10485221 Msa1233630:intron 55.0%
CTAAGTAGGCCACACCCTCA+AGG - chr8_2:10485454-10485473 Msa1233630:CDS 55.0%
TACGTAGGGGGTGAGGGAAT+TGG + chr8_2:10487108-10487127 None:intergenic 55.0%
GACGATATACGTAGGGGGTG+AGG + chr8_2:10487115-10487134 None:intergenic 55.0%
CTCACTGCAGCTCAAAGCCC+CGG - chr8_2:10482976-10482995 Msa1233630:three_prime_UTR 60.0%
CACAGAACGGCGGAACAAGG+CGG + chr8_2:10483067-10483086 None:intergenic 60.0%
AGCCACAGAACGGCGGAACA+AGG + chr8_2:10483070-10483089 None:intergenic 60.0%
CTAGCATGCAATGGGCGGGT+TGG - chr8_2:10483210-10483229 Msa1233630:CDS 60.0%
GCACCTTCCCTTACCCTCGA+AGG - chr8_2:10484092-10484111 Msa1233630:CDS 60.0%
CCTTCCCTTACCCTCGAAGG+GGG - chr8_2:10484095-10484114 Msa1233630:CDS 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8_2:10484103-10484122 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - chr8_2:10484103-10484122 Msa1233630:CDS 60.0%
GAACCGGCAGGAAACCAGCT+AGG - chr8_2:10484119-10484138 Msa1233630:CDS 60.0%
GTGCGCTCGCTCTATGAAGG+TGG - chr8_2:10484671-10484690 Msa1233630:CDS 60.0%
GGGCCGCTTCACCATCAGTT+CGG + chr8_2:10484760-10484779 None:intergenic 60.0%
! CTGATGGTGAAGCGGCCCTT+AGG - chr8_2:10484762-10484781 Msa1233630:intron 60.0%
! CTCTAGAGGAGTGGCTGCTG+AGG - chr8_2:10486283-10486302 Msa1233630:CDS 60.0%
ACTGCAGCTCAAAGCCCCGG+TGG - chr8_2:10482979-10482998 Msa1233630:three_prime_UTR 65.0%
AGAACGGCGGAACAAGGCGG+TGG + chr8_2:10483064-10483083 None:intergenic 65.0%
! CGCCTTGTTCCGCCGTTCTG+TGG - chr8_2:10483065-10483084 Msa1233630:CDS 65.0%
TCCGCCGTTCTGTGGCTCTC+TGG - chr8_2:10483073-10483092 Msa1233630:CDS 65.0%
GCCAGAGAGCCACAGAACGG+CGG + chr8_2:10483077-10483096 None:intergenic 65.0%
CCCCCTTCGAGGGTAAGGGA+AGG + chr8_2:10484098-10484117 None:intergenic 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + chr8_2:10484108-10484127 None:intergenic 65.0%
TACTCGGGGGATCCCTGCTC+AGG + chr8_2:10486674-10486693 None:intergenic 65.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + chr8_2:10484109-10484128 None:intergenic 70.0%
CTCGAAGGGGGAGAACCGGC+AGG - chr8_2:10484107-10484126 Msa1233630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 10482743 10487308 10482743 ID=Msa1233630;Name=Msa1233630
chr8_2 mRNA 10482743 10487308 10482743 ID=Msa1233630-mRNA-1;Parent=Msa1233630;Name=Msa1233630-mRNA-1;_AED=0.28;_eAED=0.28;_QI=140|1|1|1|1|1|9|263|869
chr8_2 exon 10482743 10483762 10482743 ID=Msa1233630-mRNA-1:exon:4143;Parent=Msa1233630-mRNA-1
chr8_2 exon 10484091 10484354 10484091 ID=Msa1233630-mRNA-1:exon:4142;Parent=Msa1233630-mRNA-1
chr8_2 exon 10484446 10484750 10484446 ID=Msa1233630-mRNA-1:exon:4141;Parent=Msa1233630-mRNA-1
chr8_2 exon 10484828 10484935 10484828 ID=Msa1233630-mRNA-1:exon:4140;Parent=Msa1233630-mRNA-1
chr8_2 exon 10485057 10485142 10485057 ID=Msa1233630-mRNA-1:exon:4139;Parent=Msa1233630-mRNA-1
chr8_2 exon 10485242 10485562 10485242 ID=Msa1233630-mRNA-1:exon:4138;Parent=Msa1233630-mRNA-1
chr8_2 exon 10485906 10486146 10485906 ID=Msa1233630-mRNA-1:exon:4137;Parent=Msa1233630-mRNA-1
chr8_2 exon 10486261 10486550 10486261 ID=Msa1233630-mRNA-1:exon:4136;Parent=Msa1233630-mRNA-1
chr8_2 exon 10486931 10487308 10486931 ID=Msa1233630-mRNA-1:exon:4135;Parent=Msa1233630-mRNA-1
chr8_2 five_prime_UTR 10487169 10487308 10487169 ID=Msa1233630-mRNA-1:five_prime_utr;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10486931 10487168 10486931 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10486261 10486550 10486261 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10485906 10486146 10485906 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10485242 10485562 10485242 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10485057 10485142 10485057 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10484828 10484935 10484828 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10484446 10484750 10484446 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10484091 10484354 10484091 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 CDS 10483006 10483762 10483006 ID=Msa1233630-mRNA-1:cds;Parent=Msa1233630-mRNA-1
chr8_2 three_prime_UTR 10482743 10483005 10482743 ID=Msa1233630-mRNA-1:three_prime_utr;Parent=Msa1233630-mRNA-1
Gene Sequence

>Msa1233630

ATGAGTTCATTGGTGATAAGTCTCTTTGATAGGCACCAAAAGGTGAAGGGAACTGTGGTGTTGATGCAAAAGAATGTGTTGGACATTAACGAACTCACTGCAGCTCAAAGCCCCGGTGGTGTAATTGACGGTTTCTTCGATTTTGCTGGTGATGTTGCCGGTAATGTACTTGACAGCGCCACCGCCTTGTTCCGCCGTTCTGTGGCTCTCTGGCTGATTAGTGCTACCGTTGTTGATGGAACTGGAAAAGGCAAAGTGGGAGAGAAAACGTTTCTGAAATCTGTTATTACCTCCTTACCAACATTGGGAGATAAACAAAATGCTTTCAGTATTGAATTTGAATGGGACAATGACATGGGAACTCCAGGAGCTTTTTATATCGAGAATTATCTGCAAGGCGGTGAATTCTTCCTTGTGAGCTTGACTCTTGAAGATGTTCCAAACCATGGAACCATCAGCTTTGTTTGCAACTCATGGGTTTACAATGCTAAAAATTACAAAACTAAACGCATTTTCTTTGCCAACAAGACATACCTTCCAAGTGAAACACCAGCTCCATTAGTGTACTACAGACAAGAAGAACTGAAGACTTTAAGAGGAGATGGAACTGGAGAGCGTAAGGAATGGGAAAGAATATATGATTACGATGTCTACAATGATTTGGGTGAGCCTGACAAGAACGCTAGTTTGGCTCGTCCTGTTGTTGGAGGATCTAGCACCTTCCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAGGAAAGATCCTAAGAGTGAGAGTCGAAGTGACACTGTTTACCTTCCAAGAGATGAATCATTTGGGCACACAAAGTCATCAGACTTTCTTGTTCACATACTCAAATCTGCATCACAAAATGTCATACCTCGGTTGAGATCTATAGTTACATTACAATTCAATCAGCCTGAGTTAAACACTTTTGAAGATGTGCGCTCGCTCTATGAAGGTGGAATTAAGCTTCCTACTGAAATACTAAGTGAACTTAGCCCAATACCATTGTTCAAGGAACTTTTCCGAACTGATGGTGAAGCGGCCCTTAGGTTTCCACCACCAAAAGTGATTCAAGTGGATCATTCTGCATGGATGACTGATGATGAATTTGCAAGGGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAAACTCACGGAGTTTCCACCAAAGAGCAAGTTAGATACCCAACTCTTTGGTAATAATACCAGCACCATAACCAAAGAAAACTTGCAGCCAAACATGGTTGGGGTCACTGTAGAACAGGCTATCCAAAATAATAAACTGTTCATACTGGATCACCACGACCCACTCTTTCCATATTTGAGGAAAATAAATGCAACCGAGACAAAGGCCTATGCTACTAGAACCATCCTTTTCTTGCAAGATGATGGAACTTTGAAGCCATTGGCGATTGAACTAAGTAGGCCACACCCTCAAGGTGATAGTTTTGGTCCTGTTAGCAATGTTTACTTGCCCGCAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCCAAGGCTTACGTAATTGTAAATGATTCATGTTATCACCAACTTGTTAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCGTCATAGCAACAAATAGGCATCTTAGTGTGGTTCACCCTATTCATAAACTTCTGCTTCCACATTATCGTGACACAATGAACATAAATGCATTAGCACGAAATGTGTTGGTTAATGCAGACGGTATTATTGAGTCAACTTTCTTGTGGGGAAAGTATGCTTTGGAAATGTCTTCGGTGGTTTACAAGGATTGGGTTTTCACTGAGCAAGGCCTACCTAATGATCTAATCAAAAGAGGAGTGGCTGCTGAGGACCCTACTTATGCATATGGTCTTCGACTTCTAATAGAGGACTACCCGTATGCTTCAGATGGACTAGAAATATGGGCTGCTATTAAGACATGGGTTGATGAATATGTCAACTTCTACTACAAGTCAGATGCATCTATTGCACAAGATTCTGAACTCCAAGCATTCTGGAAAGAACTTGTAGAGGTCGGTCATGGTGACTTGAAGAATGCAACGTGGTGGTTTAAGATGCAAACTCGTGTGGAGTTGATTGAAGCTTGCACCACCCTCATATGGATTGCTTCAGCACTTCATGCAGCAGTTAATTTTGGACAGTATCCGTATGGAGGATATATCGTTAACCGACCAACTAAAAGCAGAAGATTCATGCCTGAGCAGGGATCCCCCGAGTACGATGAACTTGCTAAGGATTACCAAAAGACCTATTTGAGGACAATCACTCCCAAGAATGATACTCTTACTGACTTGACCATTATAGAGGTCTTGTCTAGGCATGCTTCTGATGAGCAATACCTTGGGGAGAGAATTGAAGGTGATCTCTGGACTTCTGATTCACAGCCAAAAGAGTCCTTTAAAAGGTTTGGAAAGAAGTTAGCTGAAATTGAGCAAAAACTCATTCAAAGGAACAACGATGAGACACTGATGAATCGTAACGGACCAGTGAAGATGCCTTACACTCTGCTTCATCCTTCTAGTGAGGAAGGATTGACTTGCAGAGGCATTCCCAACAGTGTCTCCATCTAA
Protein sequence

>Msa1233630

MSSLVISLFDRHQKVKGTVVLMQKNVLDINELTAAQSPGGVIDGFFDFAGDVAGNVLDSATALFRRSVALWLISATVVDGTGKGKVGEKTFLKSVITSLPTLGDKQNAFSIEFEWDNDMGTPGAFYIENYLQGGEFFLVSLTLEDVPNHGTISFVCNSWVYNAKNYKTKRIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGERKEWERIYDYDVYNDLGEPDKNASLARPVVGGSSTFPYPRRGRTGRKPARKDPKSESRSDTVYLPRDESFGHTKSSDFLVHILKSASQNVIPRLRSIVTLQFNQPELNTFEDVRSLYEGGIKLPTEILSELSPIPLFKELFRTDGEAALRFPPPKVIQVDHSAWMTDDEFAREMIAGVNPHIIKKLTEFPPKSKLDTQLFGNNTSTITKENLQPNMVGVTVEQAIQNNKLFILDHHDPLFPYLRKINATETKAYATRTILFLQDDGTLKPLAIELSRPHPQGDSFGPVSNVYLPASEGVEASIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNADGIIESTFLWGKYALEMSSVVYKDWVFTEQGLPNDLIKRGVAAEDPTYAYGLRLLIEDYPYASDGLEIWAAIKTWVDEYVNFYYKSDASIAQDSELQAFWKELVEVGHGDLKNATWWFKMQTRVELIEACTTLIWIASALHAAVNFGQYPYGGYIVNRPTKSRRFMPEQGSPEYDELAKDYQKTYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDLWTSDSQPKESFKRFGKKLAEIEQKLIQRNNDETLMNRNGPVKMPYTLLHPSSEEGLTCRGIPNSVSI*