Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303750 | sp|O65282|CH20_ARATH | 75.294 | 255 | 59 | 2 | 1 | 253 | 1 | 253 | 1.22e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303750 | G7JS70 | 95.257 | 253 | 12 | 0 | 1 | 253 | 1 | 253 | 5.61e-171 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1303750 | 0.804090 | 2.552150e-49 | -8.615850e-47 |
| Msa0017120 | Msa1303750 | 0.800201 | 1.610734e-48 | -8.615850e-47 |
| Msa0017940 | Msa1303750 | 0.823323 | 1.473218e-53 | -8.615850e-47 |
| Msa0043680 | Msa1303750 | 0.825046 | 5.801795e-54 | -8.615850e-47 |
| Msa0050580 | Msa1303750 | 0.831459 | 1.649063e-55 | -8.615850e-47 |
| Msa0065390 | Msa1303750 | 0.801164 | 1.024590e-48 | -8.615850e-47 |
| Msa0077910 | Msa1303750 | 0.824847 | 6.464439e-54 | -8.615850e-47 |
| Msa0078090 | Msa1303750 | 0.812778 | 3.572282e-51 | -8.615850e-47 |
| Msa0092180 | Msa1303750 | 0.867010 | 1.874798e-65 | -8.615850e-47 |
| Msa0092660 | Msa1303750 | 0.841413 | 4.824437e-58 | -8.615850e-47 |
| Msa0092680 | Msa1303750 | 0.822996 | 1.756658e-53 | -8.615850e-47 |
| Msa0092730 | Msa1303750 | 0.831922 | 1.268453e-55 | -8.615850e-47 |
| Msa0110710 | Msa1303750 | 0.807211 | 5.646642e-50 | -8.615850e-47 |
| Msa0639370 | Msa1303750 | 0.828895 | 6.970082e-55 | -8.615850e-47 |
| Msa0661470 | Msa1303750 | 0.857877 | 1.210096e-62 | -8.615850e-47 |
| Msa0667970 | Msa1303750 | 0.817191 | 3.747340e-52 | -8.615850e-47 |
| Msa0681890 | Msa1303750 | 0.801522 | 8.654285e-49 | -8.615850e-47 |
| Msa0682460 | Msa1303750 | 0.871543 | 6.308734e-67 | -8.615850e-47 |
| Msa0701320 | Msa1303750 | 0.801723 | 7.868621e-49 | -8.615850e-47 |
| Msa0703760 | Msa1303750 | 0.842781 | 2.096706e-58 | -8.615850e-47 |
| Msa0761790 | Msa1303750 | 0.828730 | 7.640321e-55 | -8.615850e-47 |
| Msa0790180 | Msa1303750 | 0.817682 | 2.904670e-52 | -8.615850e-47 |
| Msa0804110 | Msa1303750 | 0.818253 | 2.158136e-52 | -8.615850e-47 |
| Msa0842220 | Msa1303750 | 0.815356 | 9.641174e-52 | -8.615850e-47 |
| Msa0125800 | Msa1303750 | 0.827895 | 1.214926e-54 | -8.615850e-47 |
| Msa0131440 | Msa1303750 | 0.816083 | 6.639807e-52 | -8.615850e-47 |
| Msa0135980 | Msa1303750 | 0.814330 | 1.627616e-51 | -8.615850e-47 |
| Msa0137600 | Msa1303750 | 0.819996 | 8.660745e-53 | -8.615850e-47 |
| Msa0141830 | Msa1303750 | 0.841470 | 4.661456e-58 | -8.615850e-47 |
| Msa0157350 | Msa1303750 | 0.819163 | 1.341359e-52 | -8.615850e-47 |
| Msa0170440 | Msa1303750 | 0.825371 | 4.861150e-54 | -8.615850e-47 |
| Msa0177280 | Msa1303750 | 0.863370 | 2.612518e-64 | -8.615850e-47 |
| Msa0203520 | Msa1303750 | 0.855165 | 7.575471e-62 | -8.615850e-47 |
| Msa0223390 | Msa1303750 | 0.802340 | 5.876298e-49 | -8.615850e-47 |
| Msa1258940 | Msa1303750 | 0.816240 | 6.123150e-52 | -8.615850e-47 |
| Msa1271510 | Msa1303750 | 0.800649 | 1.305620e-48 | -8.615850e-47 |
| Msa1271600 | Msa1303750 | 0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa1276840 | Msa1303750 | 0.811042 | 8.530420e-51 | -8.615850e-47 |
| Msa1303750 | Msa1303810 | 0.981523 | 8.526109e-153 | -8.615850e-47 |
| Msa1303750 | Msa1325650 | 0.800716 | 1.264805e-48 | -8.615850e-47 |
| Msa1303750 | Msa1363080 | 0.988317 | 1.508316e-173 | -8.615850e-47 |
| Msa1303750 | Msa1365870 | 0.844413 | 7.677984e-59 | -8.615850e-47 |
| Msa1303750 | Msa1382310 | 0.803162 | 3.976301e-49 | -8.615850e-47 |
| Msa1303750 | Msa1398740 | 0.801057 | 1.077246e-48 | -8.615850e-47 |
| Msa1303750 | Msa1398840 | 0.839689 | 1.363848e-57 | -8.615850e-47 |
| Msa1303750 | Msa1405770 | 0.816455 | 5.482264e-52 | -8.615850e-47 |
| Msa1303750 | Msa1407710 | 0.826052 | 3.351063e-54 | -8.615850e-47 |
| Msa1303750 | Msa1416460 | 0.807668 | 4.516461e-50 | -8.615850e-47 |
| Msa1303750 | Msa1430270 | 0.801018 | 1.097474e-48 | -8.615850e-47 |
| Msa1303750 | Msa1438360 | 0.856215 | 3.740107e-62 | -8.615850e-47 |
| Msa1303750 | Msa1449880 | 0.803712 | 3.057849e-49 | -8.615850e-47 |
| Msa0367370 | Msa1303750 | 0.828821 | 7.264604e-55 | -8.615850e-47 |
| Msa0371720 | Msa1303750 | 0.841402 | 4.857703e-58 | -8.615850e-47 |
| Msa0382500 | Msa1303750 | 0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa0386270 | Msa1303750 | 0.843788 | 1.129382e-58 | -8.615850e-47 |
| Msa0417630 | Msa1303750 | 0.802853 | 4.605797e-49 | -8.615850e-47 |
| Msa0429270 | Msa1303750 | 0.824760 | 6.779922e-54 | -8.615850e-47 |
| Msa0432680 | Msa1303750 | 0.815153 | 1.069488e-51 | -8.615850e-47 |
| Msa0436090 | Msa1303750 | 0.855699 | 5.294490e-62 | -8.615850e-47 |
| Msa1027790 | Msa1303750 | 0.817501 | 3.191234e-52 | -8.615850e-47 |
| Msa1028460 | Msa1303750 | 0.805374 | 1.377023e-49 | -8.615850e-47 |
| Msa1032970 | Msa1303750 | 0.808070 | 3.709442e-50 | -8.615850e-47 |
| Msa1051300 | Msa1303750 | 0.800196 | 1.614462e-48 | -8.615850e-47 |
| Msa1072080 | Msa1303750 | 0.808384 | 3.180787e-50 | -8.615850e-47 |
| Msa1080620 | Msa1303750 | 0.804950 | 1.688769e-49 | -8.615850e-47 |
| Msa1084150 | Msa1303750 | 0.810601 | 1.063104e-50 | -8.615850e-47 |
| Msa1106560 | Msa1303750 | 0.811994 | 5.298289e-51 | -8.615850e-47 |
| Msa1106580 | Msa1303750 | 0.811384 | 7.190759e-51 | -8.615850e-47 |
| Msa0255990 | Msa1303750 | 0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa0257130 | Msa1303750 | 0.811439 | 6.998673e-51 | -8.615850e-47 |
| Msa0259980 | Msa1303750 | 0.802040 | 6.774248e-49 | -8.615850e-47 |
| Msa0280140 | Msa1303750 | 0.816331 | 5.843803e-52 | -8.615850e-47 |
| Msa0289780 | Msa1303750 | 0.804546 | 2.050863e-49 | -8.615850e-47 |
| Msa0317260 | Msa1303750 | 0.804123 | 2.512689e-49 | -8.615850e-47 |
| Msa0323990 | Msa1303750 | 0.831822 | 1.342255e-55 | -8.615850e-47 |
| Msa0327550 | Msa1303750 | 0.806684 | 7.297466e-50 | -8.615850e-47 |
| Msa0339860 | Msa1303750 | 0.804853 | 1.769576e-49 | -8.615850e-47 |
| Msa0342620 | Msa1303750 | 0.800805 | 1.213234e-48 | -8.615850e-47 |
| Msa1112610 | Msa1303750 | 0.803023 | 4.249013e-49 | -8.615850e-47 |
| Msa1126310 | Msa1303750 | 0.832662 | 8.318620e-56 | -8.615850e-47 |
| Msa1127510 | Msa1303750 | 0.817297 | 3.547650e-52 | -8.615850e-47 |
| Msa1131470 | Msa1303750 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa1167160 | Msa1303750 | 0.820142 | 8.018602e-53 | -8.615850e-47 |
| Msa1197110 | Msa1303750 | 0.821445 | 4.023605e-53 | -8.615850e-47 |
| Msa1209150 | Msa1303750 | 0.909624 | 4.636410e-82 | -8.615850e-47 |
| Msa1219250 | Msa1303750 | 0.829365 | 5.361642e-55 | -8.615850e-47 |
| Msa0482960 | Msa1303750 | 0.836273 | 1.030630e-56 | -8.615850e-47 |
| Msa0485280 | Msa1303750 | 0.814070 | 1.857594e-51 | -8.615850e-47 |
| Msa0506760 | Msa1303750 | 0.855987 | 4.360460e-62 | -8.615850e-47 |
| Msa0511940 | Msa1303750 | 0.834545 | 2.817136e-56 | -8.615850e-47 |
| Msa0532840 | Msa1303750 | 0.852731 | 3.809154e-61 | -8.615850e-47 |
| Msa0533010 | Msa1303750 | 0.843383 | 1.449292e-58 | -8.615850e-47 |
| Msa0555940 | Msa1303750 | 0.805372 | 1.378268e-49 | -8.615850e-47 |
| Msa0567290 | Msa1303750 | 0.845284 | 4.469795e-59 | -8.615850e-47 |
| Msa0581460 | Msa1303750 | 0.823279 | 1.508564e-53 | -8.615850e-47 |
| Msa0925160 | Msa1303750 | 0.805447 | 1.329076e-49 | -8.615850e-47 |
| Msa0931480 | Msa1303750 | 0.801667 | 8.081545e-49 | -8.615850e-47 |
| Msa0955260 | Msa1303750 | 0.802173 | 6.359680e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303750 | MtrunA17_Chr4g0070201 | 95.257 | 253 | 12 | 0 | 1 | 253 | 1 | 253 | 1.08e-174 | 481 |
| Msa1303750 | MtrunA17_Chr2g0301241 | 76.378 | 254 | 59 | 1 | 1 | 253 | 1 | 254 | 5.23e-142 | 398 |
| Msa1303750 | MtrunA17_Chr3g0139681 | 37.895 | 95 | 57 | 2 | 158 | 252 | 3 | 95 | 8.36e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303750 | AT5G20720.1 | 75.294 | 255 | 59 | 2 | 1 | 253 | 1 | 253 | 1.25e-135 | 382 |
| Msa1303750 | AT5G20720.2 | 75.294 | 255 | 59 | 2 | 1 | 253 | 1 | 253 | 1.25e-135 | 382 |
| Msa1303750 | AT5G20720.4 | 75.294 | 255 | 59 | 2 | 1 | 253 | 1 | 253 | 1.25e-135 | 382 |
| Msa1303750 | AT5G20720.3 | 75.294 | 255 | 59 | 2 | 1 | 253 | 1 | 253 | 1.25e-135 | 382 |
Find 75 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTATCCTCTCTTAATTT+TGG | 0.185301 | 8_3:-67020542 | Msa1303750:exon |
| ATAAAACCCAAATCTATCTT+AGG | 0.191322 | 8_3:-67022834 | Msa1303750:five_prime_UTR |
| GAAGTCATTCCCTGCATATT+TGG | 0.259970 | 8_3:+67020614 | None:intergenic |
| AACTGTATTCCCGGGTGAAA+TGG | 0.321202 | 8_3:+67020644 | None:intergenic |
| CCTCGTAACAATGCTAGAAT+TGG | 0.335567 | 8_3:-67022526 | Msa1303750:CDS |
| CACGAACGAAGCTTACAAAA+TGG | 0.352042 | 8_3:+67022787 | None:intergenic |
| TTCCCGGGTGAAATGGATAA+TGG | 0.363835 | 8_3:+67020651 | None:intergenic |
| CGTGGCACACTTTGTTGATA+AGG | 0.388179 | 8_3:-67022768 | Msa1303750:intron |
| TTTAAGATCTTTGACCTCTT+CGG | 0.402758 | 8_3:+67021387 | None:intergenic |
| AGGAACCTTTCTTCCTTTGA+AGG | 0.413360 | 8_3:-67022574 | Msa1303750:CDS |
| GGAGTACAAAACTGTATTCC+CGG | 0.420138 | 8_3:+67020635 | None:intergenic |
| TATCAAGACTCTGTCATTCA+AGG | 0.421253 | 8_3:+67021363 | None:intergenic |
| TAAAACCCAAATCTATCTTA+GGG | 0.442509 | 8_3:-67022833 | Msa1303750:five_prime_UTR |
| CCTTCGTCATCCACAGGCCC+TGG | 0.444066 | 8_3:+67020684 | None:intergenic |
| GGCTTTGATTGAGCAGTTGA+TGG | 0.449739 | 8_3:+67021674 | None:intergenic |
| CTGTTGCCTTCGTCATCCAC+AGG | 0.452383 | 8_3:+67020678 | None:intergenic |
| CAGGTGATAGCTGTTGGTCC+AGG | 0.460455 | 8_3:-67020702 | Msa1303750:CDS |
| GAATGACAGAGTCTTGATAA+AGG | 0.473936 | 8_3:-67021359 | Msa1303750:intron |
| TAATTTACTAAACATCCATC+TGG | 0.481409 | 8_3:+67020288 | None:intergenic |
| TTGGAGACGGGAAGACAGTT+GGG | 0.483437 | 8_3:-67021628 | Msa1303750:CDS |
| TTAAGAACAACACATTTCAA+TGG | 0.489464 | 8_3:-67022632 | Msa1303750:exon |
| GCAATCCTTCAAAGGAAGAA+AGG | 0.496887 | 8_3:+67022569 | None:intergenic |
| ACGAACGAAGCTTACAAAAT+GGG | 0.497890 | 8_3:+67022788 | None:intergenic |
| GCCAATGGATGGCTTATCCT+TGG | 0.505865 | 8_3:+67021125 | None:intergenic |
| AATGACTTCAAAGGCAAAGA+TGG | 0.508584 | 8_3:-67020600 | Msa1303750:CDS |
| GAGGTAGTTGCTGTTGGAGA+CGG | 0.521962 | 8_3:-67021641 | Msa1303750:CDS |
| GTTGGAGACGGGAAGACAGT+TGG | 0.523055 | 8_3:-67021629 | Msa1303750:CDS |
| TGCTGGTGGTTTGTTGCTCA+CGG | 0.524264 | 8_3:-67021154 | Msa1303750:CDS |
| ATCAAGACTCTGTCATTCAA+GGG | 0.529761 | 8_3:+67021364 | None:intergenic |
| CTGCTCAATCAAAGCCTCAA+GGG | 0.533192 | 8_3:-67021667 | Msa1303750:CDS |
| GAATCATATGCATGTTTGAT+CGG | 0.537354 | 8_3:-67020251 | Msa1303750:three_prime_UTR |
| AGGTAGTTGCTGTTGGAGAC+GGG | 0.539082 | 8_3:-67021640 | Msa1303750:CDS |
| AAGCTTACCGTGCCAATGGA+TGG | 0.542126 | 8_3:+67021114 | None:intergenic |
| AGAAAAGCTTACCGTGCCAA+TGG | 0.548046 | 8_3:+67021110 | None:intergenic |
| GGAACTGAAGTGGAGTTCAA+TGG | 0.549387 | 8_3:-67021460 | Msa1303750:CDS |
| AGCTGTTGGTCCAGGGCCTG+TGG | 0.552111 | 8_3:-67020694 | Msa1303750:CDS |
| GGAAGTTCGCAATCCTTCAA+AGG | 0.561777 | 8_3:+67022561 | None:intergenic |
| GCGGCTTTAACAACAATAGA+CGG | 0.565089 | 8_3:+67022481 | None:intergenic |
| TTCAAAACATCTTATACTGA+AGG | 0.568271 | 8_3:-67021437 | Msa1303750:CDS |
| CATACAACTGTCAAGCCACT+AGG | 0.568378 | 8_3:-67021758 | Msa1303750:CDS |
| ACCAAGGATAAGCCATCCAT+TGG | 0.568643 | 8_3:-67021126 | Msa1303750:CDS |
| TATGCAGGGAATGACTTCAA+AGG | 0.569312 | 8_3:-67020609 | Msa1303750:CDS |
| TTTGAGAGCCTCAGATGTCA+TGG | 0.571249 | 8_3:-67020562 | Msa1303750:CDS |
| GAGTACAAAACTGTATTCCC+GGG | 0.572521 | 8_3:+67020636 | None:intergenic |
| CTGAAGGATGATGACATCGT+TGG | 0.572824 | 8_3:-67021421 | Msa1303750:CDS |
| TGCTCAATCAAAGCCTCAAG+GGG | 0.578517 | 8_3:-67021666 | Msa1303750:CDS |
| AGGTGATAGCTGTTGGTCCA+GGG | 0.579593 | 8_3:-67020701 | Msa1303750:CDS |
| AAAGTATGCAGGAACTGAAG+TGG | 0.581171 | 8_3:-67021470 | Msa1303750:CDS |
| ACTGCTCAATCAAAGCCTCA+AGG | 0.582194 | 8_3:-67021668 | Msa1303750:CDS |
| GTTGTGTACTCAAAGTATGC+AGG | 0.590902 | 8_3:-67021481 | Msa1303750:CDS |
| AAACCATTATCCATTTCACC+CGG | 0.592297 | 8_3:-67020654 | Msa1303750:CDS |
| CGGCTTTAACAACAATAGAC+GGG | 0.595648 | 8_3:+67022482 | None:intergenic |
| GGATGCAGAAGAGAAAACTC+AGG | 0.597980 | 8_3:-67021711 | Msa1303750:CDS |
| ACCAGTACTCTATCACCTAG+TGG | 0.604909 | 8_3:+67021743 | None:intergenic |
| CAAAGTGGACATTAGTGTGA+AGG | 0.607471 | 8_3:-67021600 | Msa1303750:intron |
| GAATTGGTATTCTTACACAA+AGG | 0.614844 | 8_3:-67022510 | Msa1303750:CDS |
| CCAGGGCCTGTGGATGACGA+AGG | 0.620963 | 8_3:-67020684 | Msa1303750:CDS |
| AAAATAGCCAAAATTAAGAG+AGG | 0.622578 | 8_3:+67020535 | None:intergenic |
| GTTGCTCACGGAAGCAACCA+AGG | 0.626344 | 8_3:-67021142 | Msa1303750:CDS |
| GAGGATAGCCATGACATCTG+AGG | 0.634831 | 8_3:+67020554 | None:intergenic |
| AAAATGGGAAGAAACGTGAA+AGG | 0.640266 | 8_3:+67022803 | None:intergenic |
| CCAATTCTAGCATTGTTACG+AGG | 0.641555 | 8_3:+67022526 | None:intergenic |
| AACCATTATCCATTTCACCC+GGG | 0.641591 | 8_3:-67020653 | Msa1303750:CDS |
| GTTACGAGGAAAATGAATTG+CGG | 0.642882 | 8_3:+67022540 | None:intergenic |
| GGATAAGCCATCCATTGGCA+CGG | 0.647992 | 8_3:-67021121 | Msa1303750:intron |
| GATGCAACAGAGATTGTGCA+AGG | 0.653011 | 8_3:+67020411 | None:intergenic |
| CTGCTTCATCGATTTCTACG+AGG | 0.656045 | 8_3:-67022594 | Msa1303750:CDS |
| TGGTATTCTTGAAACCGAAG+AGG | 0.662324 | 8_3:-67021401 | Msa1303750:CDS |
| ATGCATTGAAAACCATGAGA+AGG | 0.671326 | 8_3:+67020357 | None:intergenic |
| GCTGCAGGTTGCAGAAGCTG+AGG | 0.680718 | 8_3:-67021184 | Msa1303750:intron |
| GATGCAGAAGAGAAAACTCA+GGG | 0.684794 | 8_3:-67021710 | Msa1303750:CDS |
| ATGTAACAGGTGATAGCTGT+TGG | 0.691284 | 8_3:-67020708 | Msa1303750:intron |
| GACAGTTGGGAAGAACAAAG+TGG | 0.692016 | 8_3:-67021615 | Msa1303750:CDS |
| GCAGAAGAGAAAACTCAGGG+TGG | 0.728959 | 8_3:-67021707 | Msa1303750:CDS |
| GCTCAATCAAAGCCTCAAGG+GGG | 0.730531 | 8_3:-67021665 | Msa1303750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAATACCTT+GGG | + | chr8_3:67020634-67020653 | None:intergenic | 10.0% |
| !! | AAAAAATAAAAATAATACCT+TGG | + | chr8_3:67020635-67020654 | None:intergenic | 10.0% |
| !!! | AAGGTATTATTTTTATTTTT+TGG | - | chr8_3:67020634-67020653 | Msa1303750:CDS | 10.0% |
| !!! | AGGTATTATTTTTATTTTTT+GGG | - | chr8_3:67020635-67020654 | Msa1303750:CDS | 10.0% |
| !!! | TTTTCAAAAAATTAAAACAA+TGG | - | chr8_3:67022105-67022124 | Msa1303750:intron | 10.0% |
| !! | AAAATAAAAATAATACCTTG+GGG | + | chr8_3:67020633-67020652 | None:intergenic | 15.0% |
| !! | CGAAAAATATTCATAAATAT+TGG | + | chr8_3:67021113-67021132 | None:intergenic | 15.0% |
| !! | GTTAAGACAAATAATTAAAT+GGG | + | chr8_3:67021799-67021818 | None:intergenic | 15.0% |
| !! | AACTGCTAAAAAATTGAAAA+TGG | + | chr8_3:67020426-67020445 | None:intergenic | 20.0% |
| !! | AAATAAAAATAATACCTTGG+GGG | + | chr8_3:67020632-67020651 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTTTTGGGTCA+TGG | - | chr8_3:67020641-67020660 | Msa1303750:CDS | 20.0% |
| !!! | TACATTTTCTCTTATACTAA+GGG | + | chr8_3:67020903-67020922 | None:intergenic | 20.0% |
| !! | TTCAGACCAATAAAAAAAAA+AGG | - | chr8_3:67021011-67021030 | Msa1303750:intron | 20.0% |
| !! | TCAGACCAATAAAAAAAAAA+GGG | - | chr8_3:67021012-67021031 | Msa1303750:intron | 20.0% |
| !! | GAAAAATATTCAAAAATGGT+GGG | + | chr8_3:67021087-67021106 | None:intergenic | 20.0% |
| !! | TGAAAAATATTCAAAAATGG+TGG | + | chr8_3:67021088-67021107 | None:intergenic | 20.0% |
| !! | GTCTGAAAAATATTCAAAAA+TGG | + | chr8_3:67021091-67021110 | None:intergenic | 20.0% |
| !! | ACAAGATGAAATTACTAATA+AGG | + | chr8_3:67021296-67021315 | None:intergenic | 20.0% |
| !! | GGTTAAGACAAATAATTAAA+TGG | + | chr8_3:67021800-67021819 | None:intergenic | 20.0% |
| !! | AAGTATACTGTTTCAAAAAA+AGG | + | chr8_3:67021997-67022016 | None:intergenic | 20.0% |
| !! | CAAAAAATTAAAACAATGGA+TGG | - | chr8_3:67022109-67022128 | Msa1303750:intron | 20.0% |
| !!! | TTTTTTTACATATATCCAGA+TGG | - | chr8_3:67022773-67022792 | Msa1303750:five_prime_UTR | 20.0% |
| !!! | AGATAGATTTGGGTTTTATT+GGG | + | chr8_3:67020241-67020260 | None:intergenic | 25.0% |
| !!! | AAGATAGATTTGGGTTTTAT+TGG | + | chr8_3:67020242-67020261 | None:intergenic | 25.0% |
| ! | ATAAAACCCAAATCTATCTT+AGG | - | chr8_3:67020242-67020261 | Msa1303750:three_prime_UTR | 25.0% |
| ! | TAAAACCCAAATCTATCTTA+GGG | - | chr8_3:67020243-67020262 | Msa1303750:three_prime_UTR | 25.0% |
| ! | AAAAACCCTAAGATAGATTT+GGG | + | chr8_3:67020251-67020270 | None:intergenic | 25.0% |
| ! | TAAAAACCCTAAGATAGATT+TGG | + | chr8_3:67020252-67020271 | None:intergenic | 25.0% |
| !!! | TGATTCTAAGATTAGGTTAA+AGG | + | chr8_3:67020344-67020363 | None:intergenic | 25.0% |
| ! | TTTCTACAAAATGTAAAGTG+CGG | + | chr8_3:67020370-67020389 | None:intergenic | 25.0% |
| ! | TTAAGAACAACACATTTCAA+TGG | - | chr8_3:67020444-67020463 | Msa1303750:three_prime_UTR | 25.0% |
| !! | ACATTTTCTCTTATACTAAG+GGG | + | chr8_3:67020902-67020921 | None:intergenic | 25.0% |
| !! | GTACATTTTCTCTTATACTA+AGG | + | chr8_3:67020904-67020923 | None:intergenic | 25.0% |
| ! | TGTAATGTATTTCTCTTTAC+AGG | - | chr8_3:67021561-67021580 | Msa1303750:intron | 25.0% |
| ! | TTCAAAACATCTTATACTGA+AGG | - | chr8_3:67021639-67021658 | Msa1303750:CDS | 25.0% |
| !! | CTTAACCATATTTTGCATTA+AGG | - | chr8_3:67021813-67021832 | Msa1303750:intron | 25.0% |
| ! | TAACACCTTAATGCAAAATA+TGG | + | chr8_3:67021821-67021840 | None:intergenic | 25.0% |
| !! | TTTATTTATTGCTTTAGCTC+AGG | - | chr8_3:67022251-67022270 | Msa1303750:intron | 25.0% |
| ! | AAAATAGCCAAAATTAAGAG+AGG | + | chr8_3:67022544-67022563 | None:intergenic | 25.0% |
| !! | TTGTAGAACCTAAATTTTTG+TGG | - | chr8_3:67022567-67022586 | Msa1303750:CDS | 25.0% |
| !!! | CAATTTTTTATTTTGCAACG+AGG | - | chr8_3:67022606-67022625 | Msa1303750:CDS | 25.0% |
| !! | GTGTTTTGTATTATTGTCAA+CGG | - | chr8_3:67022689-67022708 | Msa1303750:intron | 25.0% |
| ! | TAATTTACTAAACATCCATC+TGG | + | chr8_3:67022791-67022810 | None:intergenic | 25.0% |
| GAAAATGGAATTAATCTACG+AGG | + | chr8_3:67020411-67020430 | None:intergenic | 30.0% | |
| GAATTGGTATTCTTACACAA+AGG | - | chr8_3:67020566-67020585 | Msa1303750:CDS | 30.0% | |
| ! | TGGATTTTCTTCATTATCTG+CGG | - | chr8_3:67020661-67020680 | Msa1303750:CDS | 30.0% |
| GTTGTGTTTATAAGCTATCT+TGG | - | chr8_3:67020754-67020773 | Msa1303750:intron | 30.0% | |
| TTGAAAGAGCTTATAGCTTA+TGG | + | chr8_3:67020821-67020840 | None:intergenic | 30.0% | |
| !!! | GGTTGCCCTTTTTTTTTTAT+TGG | + | chr8_3:67021020-67021039 | None:intergenic | 30.0% |
| ATAAAAAAAAAAGGGCAACC+CGG | - | chr8_3:67021020-67021039 | Msa1303750:intron | 30.0% | |
| AACACTAGAAATAATCCCAT+GGG | + | chr8_3:67021237-67021256 | None:intergenic | 30.0% | |
| AAACACTAGAAATAATCCCA+TGG | + | chr8_3:67021238-67021257 | None:intergenic | 30.0% | |
| !! | TAGAGTACTGGTAAAAATCA+AGG | - | chr8_3:67021344-67021363 | Msa1303750:intron | 30.0% |
| CCAAAATAAAAGAAAGACCA+AGG | + | chr8_3:67021536-67021555 | None:intergenic | 30.0% | |
| !! | CCTTGGTCTTTCTTTTATTT+TGG | - | chr8_3:67021533-67021552 | Msa1303750:intron | 30.0% |
| ! | TTTAAGATCTTTGACCTCTT+CGG | + | chr8_3:67021692-67021711 | None:intergenic | 30.0% |
| ! | CATTAAGGTGTTACGTTTAA+AGG | - | chr8_3:67021828-67021847 | Msa1303750:intron | 30.0% |
| GCAATGTTATATCGTATGAA+GGG | - | chr8_3:67022046-67022065 | Msa1303750:intron | 30.0% | |
| AGAATTGCAAGAATGTGATT+TGG | - | chr8_3:67022078-67022097 | Msa1303750:intron | 30.0% | |
| GAATTGCAAGAATGTGATTT+GGG | - | chr8_3:67022079-67022098 | Msa1303750:intron | 30.0% | |
| AATTAAAACAATGGATGGTC+TGG | - | chr8_3:67022114-67022133 | Msa1303750:intron | 30.0% | |
| !!! | TTGTTTTGATCGAGTAGTTT+TGG | - | chr8_3:67022309-67022328 | Msa1303750:intron | 30.0% |
| GAATGGTTATTTACATACCT+AGG | + | chr8_3:67022336-67022355 | None:intergenic | 30.0% | |
| ! | AATAACCATTCTACTCCTTT+TGG | - | chr8_3:67022345-67022364 | Msa1303750:intron | 30.0% |
| ! | TTTTGTACTCCAAATATGCA+GGG | - | chr8_3:67022453-67022472 | Msa1303750:intron | 30.0% |
| !! | CTAAATTTTTGTGGTGTTGA+GGG | - | chr8_3:67022576-67022595 | Msa1303750:CDS | 30.0% |
| TGTAAAAAAACTGTTCTCGT+TGG | + | chr8_3:67022763-67022782 | None:intergenic | 30.0% | |
| GAATCATATGCATGTTTGAT+CGG | - | chr8_3:67022825-67022844 | Msa1303750:five_prime_UTR | 30.0% | |
| !!! | ATTTGGGTTTTATTGGGTGA+CGG | + | chr8_3:67020235-67020254 | None:intergenic | 35.0% |
| AAAATGGGAAGAAACGTGAA+AGG | + | chr8_3:67020276-67020295 | None:intergenic | 35.0% | |
| ACGAACGAAGCTTACAAAAT+GGG | + | chr8_3:67020291-67020310 | None:intergenic | 35.0% | |
| !! | GCGGTATTGATTCTAAGATT+AGG | + | chr8_3:67020351-67020370 | None:intergenic | 35.0% |
| GTTACGAGGAAAATGAATTG+CGG | + | chr8_3:67020539-67020558 | None:intergenic | 35.0% | |
| ATCTCATAATGCACTTGAGT+GGG | + | chr8_3:67020847-67020866 | None:intergenic | 35.0% | |
| TATCTCATAATGCACTTGAG+TGG | + | chr8_3:67020848-67020867 | None:intergenic | 35.0% | |
| TAAAGGATTCCATAAGCTAG+TGG | + | chr8_3:67021511-67021530 | None:intergenic | 35.0% | |
| TTATGGAATCCTTTAAGCCT+TGG | - | chr8_3:67021516-67021535 | Msa1303750:intron | 35.0% | |
| AAAGAAAGACCAAGGCTTAA+AGG | + | chr8_3:67021528-67021547 | None:intergenic | 35.0% | |
| ATGTATTTCTCTTTACAGGC+AGG | - | chr8_3:67021565-67021584 | Msa1303750:intron | 35.0% | |
| ATCAAGACTCTGTCATTCAA+GGG | + | chr8_3:67021715-67021734 | None:intergenic | 35.0% | |
| TATCAAGACTCTGTCATTCA+AGG | + | chr8_3:67021716-67021735 | None:intergenic | 35.0% | |
| GAATGACAGAGTCTTGATAA+AGG | - | chr8_3:67021717-67021736 | Msa1303750:CDS | 35.0% | |
| ACCTGCAGCATCATAATTAA+AGG | + | chr8_3:67021881-67021900 | None:intergenic | 35.0% | |
| ! | TAACACCACTCTTCTAAAAG+AGG | - | chr8_3:67022023-67022042 | Msa1303750:intron | 35.0% |
| ! | AACACCACTCTTCTAAAAGA+GGG | - | chr8_3:67022024-67022043 | Msa1303750:intron | 35.0% |
| GGCAATGTTATATCGTATGA+AGG | - | chr8_3:67022045-67022064 | Msa1303750:intron | 35.0% | |
| TGTTATATCGTATGAAGGGA+AGG | - | chr8_3:67022050-67022069 | Msa1303750:intron | 35.0% | |
| ACTAGCATTATCCCTTAAGA+CGG | - | chr8_3:67022192-67022211 | Msa1303750:intron | 35.0% | |
| AACACATTCTACCGTCTTAA+GGG | + | chr8_3:67022206-67022225 | None:intergenic | 35.0% | |
| TACATCCAAAAGGAGTAGAA+TGG | + | chr8_3:67022353-67022372 | None:intergenic | 35.0% | |
| TATCACCTGTTACATCCAAA+AGG | + | chr8_3:67022363-67022382 | None:intergenic | 35.0% | |
| AAACCATTATCCATTTCACC+CGG | - | chr8_3:67022422-67022441 | Msa1303750:intron | 35.0% | |
| ! | GTTTTGTACTCCAAATATGC+AGG | - | chr8_3:67022452-67022471 | Msa1303750:intron | 35.0% |
| AATGACTTCAAAGGCAAAGA+TGG | - | chr8_3:67022476-67022495 | Msa1303750:CDS | 35.0% | |
| ! | TGGCTATCCTCTCTTAATTT+TGG | - | chr8_3:67022534-67022553 | Msa1303750:CDS | 35.0% |
| CCTCAACACCACAAAAATTT+AGG | + | chr8_3:67022578-67022597 | None:intergenic | 35.0% | |
| !! | CCTAAATTTTTGTGGTGTTG+AGG | - | chr8_3:67022575-67022594 | Msa1303750:CDS | 35.0% |
| ATGCATTGAAAACCATGAGA+AGG | + | chr8_3:67022722-67022741 | None:intergenic | 35.0% | |
| CACGAACGAAGCTTACAAAA+TGG | + | chr8_3:67020292-67020311 | None:intergenic | 40.0% | |
| ! | CATTTTGTAAGCTTCGTTCG+TGG | - | chr8_3:67020290-67020309 | Msa1303750:three_prime_UTR | 40.0% |
| AGGAACCTTTCTTCCTTTGA+AGG | - | chr8_3:67020502-67020521 | Msa1303750:three_prime_UTR | 40.0% | |
| GCAATCCTTCAAAGGAAGAA+AGG | + | chr8_3:67020510-67020529 | None:intergenic | 40.0% | |
| CCAATTCTAGCATTGTTACG+AGG | + | chr8_3:67020553-67020572 | None:intergenic | 40.0% | |
| CCTCGTAACAATGCTAGAAT+TGG | - | chr8_3:67020550-67020569 | Msa1303750:CDS | 40.0% | |
| ! | CGGCTTTAACAACAATAGAC+GGG | + | chr8_3:67020597-67020616 | None:intergenic | 40.0% |
| ! | GCGGCTTTAACAACAATAGA+CGG | + | chr8_3:67020598-67020617 | None:intergenic | 40.0% |
| AGAAATAATCCCATGGGACA+GGG | + | chr8_3:67021231-67021250 | None:intergenic | 40.0% | |
| TAGAAATAATCCCATGGGAC+AGG | + | chr8_3:67021232-67021251 | None:intergenic | 40.0% | |
| GATGCAGAAGAGAAAACTCA+GGG | - | chr8_3:67021366-67021385 | Msa1303750:CDS | 40.0% | |
| CAAAGTGGACATTAGTGTGA+AGG | - | chr8_3:67021476-67021495 | Msa1303750:CDS | 40.0% | |
| GTTGTGTACTCAAAGTATGC+AGG | - | chr8_3:67021595-67021614 | Msa1303750:intron | 40.0% | |
| AAAGTATGCAGGAACTGAAG+TGG | - | chr8_3:67021606-67021625 | Msa1303750:CDS | 40.0% | |
| TGGTATTCTTGAAACCGAAG+AGG | - | chr8_3:67021675-67021694 | Msa1303750:CDS | 40.0% | |
| ACAGAGTCTTGATAAAGGTG+TGG | - | chr8_3:67021722-67021741 | Msa1303750:CDS | 40.0% | |
| GCCTTTAATTATGATGCTGC+AGG | - | chr8_3:67021877-67021896 | Msa1303750:intron | 40.0% | |
| !! | ATTGCCCTCTTTTAGAAGAG+TGG | + | chr8_3:67022031-67022050 | None:intergenic | 40.0% |
| CAACACATTCTACCGTCTTA+AGG | + | chr8_3:67022207-67022226 | None:intergenic | 40.0% | |
| ! | ATTGCTTTAGCTCAGGTCAT+TGG | - | chr8_3:67022258-67022277 | Msa1303750:intron | 40.0% |
| ! | TTTAGCTCAGGTCATTGGTT+TGG | - | chr8_3:67022263-67022282 | Msa1303750:intron | 40.0% |
| ! | CTACTCCTTTTGGATGTAAC+AGG | - | chr8_3:67022355-67022374 | Msa1303750:intron | 40.0% |
| ATGTAACAGGTGATAGCTGT+TGG | - | chr8_3:67022368-67022387 | Msa1303750:intron | 40.0% | |
| AACCATTATCCATTTCACCC+GGG | - | chr8_3:67022423-67022442 | Msa1303750:intron | 40.0% | |
| GAGTACAAAACTGTATTCCC+GGG | + | chr8_3:67022443-67022462 | None:intergenic | 40.0% | |
| GGAGTACAAAACTGTATTCC+CGG | + | chr8_3:67022444-67022463 | None:intergenic | 40.0% | |
| GAAGTCATTCCCTGCATATT+TGG | + | chr8_3:67022465-67022484 | None:intergenic | 40.0% | |
| TATGCAGGGAATGACTTCAA+AGG | - | chr8_3:67022467-67022486 | Msa1303750:CDS | 40.0% | |
| CGTGGCACACTTTGTTGATA+AGG | - | chr8_3:67020308-67020327 | Msa1303750:three_prime_UTR | 45.0% | |
| !! | CTGCTTCATCGATTTCTACG+AGG | - | chr8_3:67020482-67020501 | Msa1303750:three_prime_UTR | 45.0% |
| GGAAGTTCGCAATCCTTCAA+AGG | + | chr8_3:67020518-67020537 | None:intergenic | 45.0% | |
| CTACAGCGAGAGATCAAAGT+AGG | - | chr8_3:67020952-67020971 | Msa1303750:intron | 45.0% | |
| TATACATAAGCCCTGTCCCA+TGG | - | chr8_3:67021218-67021237 | Msa1303750:intron | 45.0% | |
| ATACATAAGCCCTGTCCCAT+GGG | - | chr8_3:67021219-67021238 | Msa1303750:intron | 45.0% | |
| CATACAACTGTCAAGCCACT+AGG | - | chr8_3:67021318-67021337 | Msa1303750:intron | 45.0% | |
| ACCAGTACTCTATCACCTAG+TGG | + | chr8_3:67021336-67021355 | None:intergenic | 45.0% | |
| GGATGCAGAAGAGAAAACTC+AGG | - | chr8_3:67021365-67021384 | Msa1303750:CDS | 45.0% | |
| ! | GGCTTTGATTGAGCAGTTGA+TGG | + | chr8_3:67021405-67021424 | None:intergenic | 45.0% |
| ACTGCTCAATCAAAGCCTCA+AGG | - | chr8_3:67021408-67021427 | Msa1303750:CDS | 45.0% | |
| CTGCTCAATCAAAGCCTCAA+GGG | - | chr8_3:67021409-67021428 | Msa1303750:CDS | 45.0% | |
| TGCTCAATCAAAGCCTCAAG+GGG | - | chr8_3:67021410-67021429 | Msa1303750:CDS | 45.0% | |
| GACAGTTGGGAAGAACAAAG+TGG | - | chr8_3:67021461-67021480 | Msa1303750:CDS | 45.0% | |
| ! | TGAGTGATGCCACTAGCTTA+TGG | - | chr8_3:67021499-67021518 | Msa1303750:intron | 45.0% |
| GGAACTGAAGTGGAGTTCAA+TGG | - | chr8_3:67021616-67021635 | Msa1303750:CDS | 45.0% | |
| CTGAAGGATGATGACATCGT+TGG | - | chr8_3:67021655-67021674 | Msa1303750:CDS | 45.0% | |
| GAAGCTGAGGAAAAAACTGC+TGG | - | chr8_3:67021905-67021924 | Msa1303750:intron | 45.0% | |
| ACCAAGGATAAGCCATCCAT+TGG | - | chr8_3:67021950-67021969 | Msa1303750:intron | 45.0% | |
| AGAAAAGCTTACCGTGCCAA+TGG | + | chr8_3:67021969-67021988 | None:intergenic | 45.0% | |
| GGGATAATGCTAGTTGCTAC+AGG | + | chr8_3:67022186-67022205 | None:intergenic | 45.0% | |
| !!! | GATCGAGTAGTTTTGGTCCT+AGG | - | chr8_3:67022316-67022335 | Msa1303750:intron | 45.0% |
| TTCCCGGGTGAAATGGATAA+TGG | + | chr8_3:67022428-67022447 | None:intergenic | 45.0% | |
| AACTGTATTCCCGGGTGAAA+TGG | + | chr8_3:67022435-67022454 | None:intergenic | 45.0% | |
| TTTGAGAGCCTCAGATGTCA+TGG | - | chr8_3:67022514-67022533 | Msa1303750:CDS | 45.0% | |
| GATGCAACAGAGATTGTGCA+AGG | + | chr8_3:67022668-67022687 | None:intergenic | 45.0% | |
| ! | AACGGCTTTTCACCTTCTCA+TGG | - | chr8_3:67022707-67022726 | Msa1303750:intron | 45.0% |
| TACCTTGGGGGTAACAACAG+TGG | + | chr8_3:67020620-67020639 | None:intergenic | 50.0% | |
| GCCACTAGGTGATAGAGTAC+TGG | - | chr8_3:67021332-67021351 | Msa1303750:intron | 50.0% | |
| GCAGAAGAGAAAACTCAGGG+TGG | - | chr8_3:67021369-67021388 | Msa1303750:CDS | 50.0% | |
| GCTCAATCAAAGCCTCAAGG+GGG | - | chr8_3:67021411-67021430 | Msa1303750:CDS | 50.0% | |
| ! | GAGGTAGTTGCTGTTGGAGA+CGG | - | chr8_3:67021435-67021454 | Msa1303750:CDS | 50.0% |
| ! | AGGTAGTTGCTGTTGGAGAC+GGG | - | chr8_3:67021436-67021455 | Msa1303750:CDS | 50.0% |
| TTGGAGACGGGAAGACAGTT+GGG | - | chr8_3:67021448-67021467 | Msa1303750:CDS | 50.0% | |
| GGGCAGATCATCAAGACAAC+TGG | + | chr8_3:67021779-67021798 | None:intergenic | 50.0% | |
| GCTGAGGAAAAAACTGCTGG+TGG | - | chr8_3:67021908-67021927 | Msa1303750:intron | 50.0% | |
| !! | TGCTGGTGGTTTGTTGCTCA+CGG | - | chr8_3:67021922-67021941 | Msa1303750:intron | 50.0% |
| GCCAATGGATGGCTTATCCT+TGG | + | chr8_3:67021954-67021973 | None:intergenic | 50.0% | |
| GGATAAGCCATCCATTGGCA+CGG | - | chr8_3:67021955-67021974 | Msa1303750:intron | 50.0% | |
| AAGCTTACCGTGCCAATGGA+TGG | + | chr8_3:67021965-67021984 | None:intergenic | 50.0% | |
| AGGTGATAGCTGTTGGTCCA+GGG | - | chr8_3:67022375-67022394 | Msa1303750:intron | 50.0% | |
| GAGGATAGCCATGACATCTG+AGG | + | chr8_3:67022525-67022544 | None:intergenic | 50.0% | |
| CTTGGGGGTAACAACAGTGG+CGG | + | chr8_3:67020617-67020636 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr8_3:67021042-67021061 | None:intergenic | 55.0% |
| CACTAAAGCTCCCGCATACG+CGG | - | chr8_3:67021045-67021064 | Msa1303750:intron | 55.0% | |
| ACTAAAGCTCCCGCATACGC+GGG | - | chr8_3:67021046-67021065 | Msa1303750:intron | 55.0% | |
| ATCAAAGCCTCAAGGGGGTG+AGG | - | chr8_3:67021416-67021435 | Msa1303750:CDS | 55.0% | |
| GTTGGAGACGGGAAGACAGT+TGG | - | chr8_3:67021447-67021466 | Msa1303750:CDS | 55.0% | |
| GTTGCTCACGGAAGCAACCA+AGG | - | chr8_3:67021934-67021953 | Msa1303750:intron | 55.0% | |
| CAGGTGATAGCTGTTGGTCC+AGG | - | chr8_3:67022374-67022393 | Msa1303750:intron | 55.0% | |
| CTGTTGCCTTCGTCATCCAC+AGG | + | chr8_3:67022401-67022420 | None:intergenic | 55.0% | |
| CGCCACTGTTGTTACCCCCA+AGG | - | chr8_3:67020615-67020634 | Msa1303750:CDS | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr8_3:67021041-67021060 | None:intergenic | 60.0% |
| CTAAAGCTCCCGCATACGCG+GGG | - | chr8_3:67021047-67021066 | Msa1303750:intron | 60.0% | |
| ! | AAATGGTGGGACCCCCTTCC+CGG | + | chr8_3:67021074-67021093 | None:intergenic | 60.0% |
| GCAACTACCTCACCCCCTTG+AGG | + | chr8_3:67021426-67021445 | None:intergenic | 60.0% | |
| GGGGGTGAGGTAGTTGCTGT+TGG | - | chr8_3:67021429-67021448 | Msa1303750:CDS | 60.0% | |
| GCTGCAGGTTGCAGAAGCTG+AGG | - | chr8_3:67021892-67021911 | Msa1303750:intron | 60.0% | |
| AGCTGTTGGTCCAGGGCCTG+TGG | - | chr8_3:67022382-67022401 | Msa1303750:intron | 65.0% | |
| CCTTCGTCATCCACAGGCCC+TGG | + | chr8_3:67022395-67022414 | None:intergenic | 65.0% | |
| CCAGGGCCTGTGGATGACGA+AGG | - | chr8_3:67022392-67022411 | Msa1303750:intron | 65.0% | |
| TTCCCGGACCCCGCGTATGC+GGG | + | chr8_3:67021058-67021077 | None:intergenic | 70.0% | |
| CTTCCCGGACCCCGCGTATG+CGG | + | chr8_3:67021059-67021078 | None:intergenic | 70.0% | |
| GCATACGCGGGGTCCGGGAA+GGG | - | chr8_3:67021058-67021077 | Msa1303750:intron | 70.0% | |
| CATACGCGGGGTCCGGGAAG+GGG | - | chr8_3:67021059-67021078 | Msa1303750:intron | 70.0% | |
| ATACGCGGGGTCCGGGAAGG+GGG | - | chr8_3:67021060-67021079 | Msa1303750:intron | 70.0% | |
| GCTCCCGCATACGCGGGGTC+CGG | - | chr8_3:67021052-67021071 | Msa1303750:intron | 75.0% | |
| CTCCCGCATACGCGGGGTCC+GGG | - | chr8_3:67021053-67021072 | Msa1303750:intron | 75.0% | |
| CGCATACGCGGGGTCCGGGA+AGG | - | chr8_3:67021057-67021076 | Msa1303750:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 67020227 | 67022871 | 67020227 | ID=Msa1303750;Name=Msa1303750 |
| chr8_3 | mRNA | 67020227 | 67022871 | 67020227 | ID=Msa1303750-mRNA-1;Parent=Msa1303750;Name=Msa1303750-mRNA-1;_AED=0.02;_eAED=0.02;_QI=125|1|1|1|0.8|0.66|6|321|253 |
| chr8_3 | exon | 67020227 | 67020721 | 67020227 | ID=Msa1303750-mRNA-1:exon:20449;Parent=Msa1303750-mRNA-1 |
| chr8_3 | exon | 67021122 | 67021199 | 67021122 | ID=Msa1303750-mRNA-1:exon:20448;Parent=Msa1303750-mRNA-1 |
| chr8_3 | exon | 67021360 | 67021515 | 67021360 | ID=Msa1303750-mRNA-1:exon:20447;Parent=Msa1303750-mRNA-1 |
| chr8_3 | exon | 67021601 | 67021780 | 67021601 | ID=Msa1303750-mRNA-1:exon:20446;Parent=Msa1303750-mRNA-1 |
| chr8_3 | exon | 67022462 | 67022657 | 67022462 | ID=Msa1303750-mRNA-1:exon:20445;Parent=Msa1303750-mRNA-1 |
| chr8_3 | exon | 67022769 | 67022871 | 67022769 | ID=Msa1303750-mRNA-1:exon:20444;Parent=Msa1303750-mRNA-1 |
| chr8_3 | five_prime_UTR | 67022769 | 67022871 | 67022769 | ID=Msa1303750-mRNA-1:five_prime_utr;Parent=Msa1303750-mRNA-1 |
| chr8_3 | five_prime_UTR | 67022636 | 67022657 | 67022636 | ID=Msa1303750-mRNA-1:five_prime_utr;Parent=Msa1303750-mRNA-1 |
| chr8_3 | CDS | 67022462 | 67022635 | 67022462 | ID=Msa1303750-mRNA-1:cds;Parent=Msa1303750-mRNA-1 |
| chr8_3 | CDS | 67021601 | 67021780 | 67021601 | ID=Msa1303750-mRNA-1:cds;Parent=Msa1303750-mRNA-1 |
| chr8_3 | CDS | 67021360 | 67021515 | 67021360 | ID=Msa1303750-mRNA-1:cds;Parent=Msa1303750-mRNA-1 |
| chr8_3 | CDS | 67021122 | 67021199 | 67021122 | ID=Msa1303750-mRNA-1:cds;Parent=Msa1303750-mRNA-1 |
| chr8_3 | CDS | 67020548 | 67020721 | 67020548 | ID=Msa1303750-mRNA-1:cds;Parent=Msa1303750-mRNA-1 |
| chr8_3 | three_prime_UTR | 67020227 | 67020547 | 67020227 | ID=Msa1303750-mRNA-1:three_prime_utr;Parent=Msa1303750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
