Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203520 | XP_013463580.1 | 97.638 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 3.90e-177 | 497 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203520 | sp|O65282|CH20_ARATH | 71.484 | 256 | 68 | 2 | 1 | 254 | 1 | 253 | 4.67e-128 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203520 | A0A072VHI1 | 97.638 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 1.86e-177 | 497 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0203520 | 0.807001 | 6.256049e-50 | -8.615850e-47 |
| Msa0003470 | Msa0203520 | 0.831466 | 1.643085e-55 | -8.615850e-47 |
| Msa0012460 | Msa0203520 | 0.808316 | 3.288674e-50 | -8.615850e-47 |
| Msa0017120 | Msa0203520 | 0.832170 | 1.101058e-55 | -8.615850e-47 |
| Msa0017940 | Msa0203520 | 0.842966 | 1.872252e-58 | -8.615850e-47 |
| Msa0021300 | Msa0203520 | 0.815288 | 9.983372e-52 | -8.615850e-47 |
| Msa0027540 | Msa0203520 | 0.823093 | 1.667522e-53 | -8.615850e-47 |
| Msa0030000 | Msa0203520 | 0.829404 | 5.247655e-55 | -8.615850e-47 |
| Msa0030730 | Msa0203520 | 0.836557 | 8.728867e-57 | -8.615850e-47 |
| Msa0031720 | Msa0203520 | 0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0032120 | Msa0203520 | 0.807794 | 4.246564e-50 | -8.615850e-47 |
| Msa0032400 | Msa0203520 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0041540 | Msa0203520 | 0.846618 | 1.940100e-59 | -8.615850e-47 |
| Msa0043680 | Msa0203520 | 0.888177 | 7.441764e-73 | -8.615850e-47 |
| Msa0049990 | Msa0203520 | 0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa0050580 | Msa0203520 | 0.820622 | 6.223853e-53 | -8.615850e-47 |
| Msa0059960 | Msa0203520 | -0.807070 | 6.048416e-50 | -8.615850e-47 |
| Msa0065390 | Msa0203520 | 0.836305 | 1.011398e-56 | -8.615850e-47 |
| Msa0075310 | Msa0203520 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
| Msa0077910 | Msa0203520 | 0.844529 | 7.146281e-59 | -8.615850e-47 |
| Msa0078090 | Msa0203520 | 0.838579 | 2.645047e-57 | -8.615850e-47 |
| Msa0084680 | Msa0203520 | 0.841584 | 4.349287e-58 | -8.615850e-47 |
| Msa0089210 | Msa0203520 | 0.812104 | 5.013733e-51 | -8.615850e-47 |
| Msa0090800 | Msa0203520 | 0.807309 | 5.382173e-50 | -8.615850e-47 |
| Msa0091550 | Msa0203520 | 0.821548 | 3.809067e-53 | -8.615850e-47 |
| Msa0092180 | Msa0203520 | 0.864957 | 8.362743e-65 | -8.615850e-47 |
| Msa0092660 | Msa0203520 | 0.901638 | 2.189028e-78 | -8.615850e-47 |
| Msa0092680 | Msa0203520 | 0.890352 | 1.065125e-73 | -8.615850e-47 |
| Msa0092710 | Msa0203520 | 0.800704 | 1.271992e-48 | -8.615850e-47 |
| Msa0092730 | Msa0203520 | 0.895913 | 6.094345e-76 | -8.615850e-47 |
| Msa0103780 | Msa0203520 | 0.813232 | 2.840770e-51 | -8.615850e-47 |
| Msa0110710 | Msa0203520 | 0.841359 | 4.985173e-58 | -8.615850e-47 |
| Msa0112290 | Msa0203520 | 0.821827 | 3.282224e-53 | -8.615850e-47 |
| Msa0125230 | Msa0203520 | 0.818570 | 1.829212e-52 | -8.615850e-47 |
| Msa0125800 | Msa0203520 | 0.854953 | 8.727383e-62 | -8.615850e-47 |
| Msa0130800 | Msa0203520 | 0.832175 | 1.098408e-55 | -8.615850e-47 |
| Msa0132590 | Msa0203520 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0135980 | Msa0203520 | 0.850853 | 1.297726e-60 | -8.615850e-47 |
| Msa0137600 | Msa0203520 | 0.890308 | 1.108376e-73 | -8.615850e-47 |
| Msa0139050 | Msa0203520 | 0.819607 | 1.062677e-52 | -8.615850e-47 |
| Msa0140220 | Msa0203520 | 0.802555 | 5.307222e-49 | -8.615850e-47 |
| Msa0141830 | Msa0203520 | 0.860587 | 1.861729e-63 | -8.615850e-47 |
| Msa0146470 | Msa0203520 | 0.816996 | 4.145123e-52 | -8.615850e-47 |
| Msa0150210 | Msa0203520 | 0.833257 | 5.915215e-56 | -8.615850e-47 |
| Msa0157020 | Msa0203520 | 0.841187 | 5.531068e-58 | -8.615850e-47 |
| Msa0157350 | Msa0203520 | 0.831586 | 1.534733e-55 | -8.615850e-47 |
| Msa0163550 | Msa0203520 | 0.802896 | 4.512015e-49 | -8.615850e-47 |
| Msa0170440 | Msa0203520 | 0.848490 | 5.929905e-60 | -8.615850e-47 |
| Msa0170680 | Msa0203520 | 0.810502 | 1.116699e-50 | -8.615850e-47 |
| Msa0175280 | Msa0203520 | 0.820851 | 5.512036e-53 | -8.615850e-47 |
| Msa0177280 | Msa0203520 | 0.863018 | 3.358537e-64 | -8.615850e-47 |
| Msa0183610 | Msa0203520 | 0.800093 | 1.694337e-48 | -8.615850e-47 |
| Msa0183620 | Msa0203520 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0185390 | Msa0203520 | 0.830905 | 2.256997e-55 | -8.615850e-47 |
| Msa0185550 | Msa0203520 | 0.816583 | 5.132218e-52 | -8.615850e-47 |
| Msa0185700 | Msa0203520 | 0.815129 | 1.082655e-51 | -8.615850e-47 |
| Msa0197900 | Msa0203520 | 0.807621 | 4.622510e-50 | -8.615850e-47 |
| Msa0203520 | Msa0204030 | 0.809004 | 2.344192e-50 | -8.615850e-47 |
| Msa0203520 | Msa0207000 | 0.839429 | 1.592788e-57 | -8.615850e-47 |
| Msa0203520 | Msa0209780 | 0.823123 | 1.640664e-53 | -8.615850e-47 |
| Msa0203520 | Msa0214730 | 0.811172 | 7.995604e-51 | -8.615850e-47 |
| Msa0203520 | Msa0215980 | 0.814710 | 1.341399e-51 | -8.615850e-47 |
| Msa0203520 | Msa0223280 | 0.825179 | 5.397711e-54 | -8.615850e-47 |
| Msa0203520 | Msa0223390 | 0.857797 | 1.277806e-62 | -8.615850e-47 |
| Msa0203520 | Msa0227020 | -0.823312 | 1.482021e-53 | -8.615850e-47 |
| Msa0203520 | Msa0230400 | 0.820828 | 5.579577e-53 | -8.615850e-47 |
| Msa0203520 | Msa0246690 | 0.829330 | 5.468069e-55 | -8.615850e-47 |
| Msa0203520 | Msa0247310 | 0.813312 | 2.727417e-51 | -8.615850e-47 |
| Msa0203520 | Msa0255990 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0203520 | Msa0257130 | 0.818538 | 1.859991e-52 | -8.615850e-47 |
| Msa0203520 | Msa0257310 | 0.822171 | 2.732681e-53 | -8.615850e-47 |
| Msa0203520 | Msa0259980 | 0.832183 | 1.093036e-55 | -8.615850e-47 |
| Msa0203520 | Msa0273550 | 0.800469 | 1.420469e-48 | -8.615850e-47 |
| Msa0203520 | Msa0274780 | 0.812745 | 3.632864e-51 | -8.615850e-47 |
| Msa0203520 | Msa0280140 | 0.867815 | 1.036132e-65 | -8.615850e-47 |
| Msa0203520 | Msa0285740 | 0.839179 | 1.849230e-57 | -8.615850e-47 |
| Msa0203520 | Msa0296000 | 0.826235 | 3.031788e-54 | -8.615850e-47 |
| Msa0203520 | Msa0296610 | 0.825362 | 4.884759e-54 | -8.615850e-47 |
| Msa0203520 | Msa0302660 | 0.859198 | 4.880734e-63 | -8.615850e-47 |
| Msa0203520 | Msa0308430 | 0.826229 | 3.042248e-54 | -8.615850e-47 |
| Msa0203520 | Msa0323990 | 0.875630 | 2.648533e-68 | -8.615850e-47 |
| Msa0203520 | Msa0333900 | 0.800273 | 1.557083e-48 | -8.615850e-47 |
| Msa0203520 | Msa0334020 | 0.813216 | 2.863302e-51 | -8.615850e-47 |
| Msa0203520 | Msa0339860 | 0.832170 | 1.101026e-55 | -8.615850e-47 |
| Msa0203520 | Msa0341460 | -0.832718 | 8.057617e-56 | -8.615850e-47 |
| Msa0203520 | Msa0342620 | 0.809068 | 2.271078e-50 | -8.615850e-47 |
| Msa0203520 | Msa0350910 | 0.806578 | 7.683390e-50 | -8.615850e-47 |
| Msa0203520 | Msa0352510 | 0.800424 | 1.450911e-48 | -8.615850e-47 |
| Msa0203520 | Msa0362840 | 0.800625 | 1.319839e-48 | -8.615850e-47 |
| Msa0203520 | Msa0367370 | 0.877800 | 4.698381e-69 | -8.615850e-47 |
| Msa0203520 | Msa0367490 | 0.804365 | 2.237466e-49 | -8.615850e-47 |
| Msa0203520 | Msa0370890 | 0.816978 | 4.183903e-52 | -8.615850e-47 |
| Msa0203520 | Msa0379450 | 0.820034 | 8.490033e-53 | -8.615850e-47 |
| Msa0203520 | Msa0380310 | 0.859809 | 3.199678e-63 | -8.615850e-47 |
| Msa0203520 | Msa0380360 | 0.806527 | 7.876836e-50 | -8.615850e-47 |
| Msa0203520 | Msa0380420 | 0.837808 | 4.176443e-57 | -8.615850e-47 |
| Msa0203520 | Msa0382500 | 0.844020 | 9.789374e-59 | -8.615850e-47 |
| Msa0203520 | Msa0396970 | 0.806243 | 9.042404e-50 | -8.615850e-47 |
| Msa0203520 | Msa0399180 | 0.829798 | 4.208198e-55 | -8.615850e-47 |
| Msa0203520 | Msa0415930 | 0.831452 | 1.655609e-55 | -8.615850e-47 |
| Msa0203520 | Msa0417630 | 0.850270 | 1.892838e-60 | -8.615850e-47 |
| Msa0203520 | Msa0421790 | 0.808279 | 3.348300e-50 | -8.615850e-47 |
| Msa0203520 | Msa0429270 | 0.825003 | 5.939076e-54 | -8.615850e-47 |
| Msa0203520 | Msa0432680 | 0.840968 | 6.314258e-58 | -8.615850e-47 |
| Msa0203520 | Msa0467800 | 0.827160 | 1.823829e-54 | -8.615850e-47 |
| Msa0203520 | Msa0467880 | 0.823756 | 1.167209e-53 | -8.615850e-47 |
| Msa0203520 | Msa0470030 | 0.800870 | 1.176809e-48 | -8.615850e-47 |
| Msa0203520 | Msa0476150 | 0.805561 | 1.257742e-49 | -8.615850e-47 |
| Msa0203520 | Msa0477780 | 0.800547 | 1.369523e-48 | -8.615850e-47 |
| Msa0203520 | Msa0480150 | 0.827600 | 1.430792e-54 | -8.615850e-47 |
| Msa0203520 | Msa0482960 | 0.818749 | 1.666240e-52 | -8.615850e-47 |
| Msa0203520 | Msa0485280 | 0.857261 | 1.841569e-62 | -8.615850e-47 |
| Msa0203520 | Msa0486200 | 0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0203520 | Msa0486570 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0203520 | Msa0504740 | 0.830853 | 2.323425e-55 | -8.615850e-47 |
| Msa0203520 | Msa0515090 | 0.806867 | 6.676275e-50 | -8.615850e-47 |
| Msa0203520 | Msa0518160 | 0.802099 | 6.589144e-49 | -8.615850e-47 |
| Msa0203520 | Msa0519200 | 0.806922 | 6.500821e-50 | -8.615850e-47 |
| Msa0203520 | Msa0524090 | 0.866947 | 1.963520e-65 | -8.615850e-47 |
| Msa0203520 | Msa0524120 | 0.847708 | 9.748533e-60 | -8.615850e-47 |
| Msa0203520 | Msa0528870 | 0.819594 | 1.069971e-52 | -8.615850e-47 |
| Msa0203520 | Msa0532840 | 0.835457 | 1.659502e-56 | -8.615850e-47 |
| Msa0203520 | Msa0533010 | 0.827680 | 1.368593e-54 | -8.615850e-47 |
| Msa0203520 | Msa0537270 | 0.824333 | 8.542300e-54 | -8.615850e-47 |
| Msa0203520 | Msa0546380 | 0.819401 | 1.184104e-52 | -8.615850e-47 |
| Msa0203520 | Msa0546740 | 0.840803 | 6.975842e-58 | -8.615850e-47 |
| Msa0203520 | Msa0555940 | 0.821094 | 4.846204e-53 | -8.615850e-47 |
| Msa0203520 | Msa0567290 | 0.852110 | 5.721552e-61 | -8.615850e-47 |
| Msa0203520 | Msa0576420 | 0.812588 | 3.931522e-51 | -8.615850e-47 |
| Msa0203520 | Msa0578900 | 0.800626 | 1.319354e-48 | -8.615850e-47 |
| Msa0203520 | Msa0581460 | 0.845342 | 4.310350e-59 | -8.615850e-47 |
| Msa0203520 | Msa0589290 | 0.804410 | 2.189235e-49 | -8.615850e-47 |
| Msa0203520 | Msa0593710 | 0.833991 | 3.878901e-56 | -8.615850e-47 |
| Msa0203520 | Msa0600390 | 0.809810 | 1.574279e-50 | -8.615850e-47 |
| Msa0203520 | Msa0604700 | 0.825185 | 5.381193e-54 | -8.615850e-47 |
| Msa0203520 | Msa0607300 | 0.806799 | 6.901288e-50 | -8.615850e-47 |
| Msa0203520 | Msa0610860 | 0.801468 | 8.878139e-49 | -8.615850e-47 |
| Msa0203520 | Msa0619330 | 0.832382 | 9.761161e-56 | -8.615850e-47 |
| Msa0203520 | Msa0633750 | 0.847585 | 1.053791e-59 | -8.615850e-47 |
| Msa0203520 | Msa0640880 | 0.817254 | 3.628088e-52 | -8.615850e-47 |
| Msa0203520 | Msa0642650 | 0.834211 | 3.417723e-56 | -8.615850e-47 |
| Msa0203520 | Msa0643800 | 0.808522 | 2.972342e-50 | -8.615850e-47 |
| Msa0203520 | Msa0659070 | 0.832522 | 9.008117e-56 | -8.615850e-47 |
| Msa0203520 | Msa0661470 | 0.801477 | 8.840462e-49 | -8.615850e-47 |
| Msa0203520 | Msa0667970 | 0.834820 | 2.402408e-56 | -8.615850e-47 |
| Msa0203520 | Msa0669220 | 0.820408 | 6.969086e-53 | -8.615850e-47 |
| Msa0203520 | Msa0681890 | 0.857340 | 1.744328e-62 | -8.615850e-47 |
| Msa0203520 | Msa0682460 | 0.904488 | 1.165026e-79 | -8.615850e-47 |
| Msa0203520 | Msa0685540 | 0.820964 | 5.192554e-53 | -8.615850e-47 |
| Msa0203520 | Msa0693570 | 0.813826 | 2.102439e-51 | -8.615850e-47 |
| Msa0203520 | Msa0703720 | 0.817667 | 2.928517e-52 | -8.615850e-47 |
| Msa0203520 | Msa0703760 | 0.878378 | 2.948718e-69 | -8.615850e-47 |
| Msa0203520 | Msa0706580 | 0.805250 | 1.461846e-49 | -8.615850e-47 |
| Msa0203520 | Msa0707780 | 0.810747 | 9.885960e-51 | -8.615850e-47 |
| Msa0203520 | Msa0709480 | 0.827274 | 1.712377e-54 | -8.615850e-47 |
| Msa0203520 | Msa0717090 | 0.817311 | 3.522473e-52 | -8.615850e-47 |
| Msa0203520 | Msa0726440 | 0.804632 | 1.967692e-49 | -8.615850e-47 |
| Msa0203520 | Msa0729550 | 0.808237 | 3.417476e-50 | -8.615850e-47 |
| Msa0203520 | Msa0730180 | 0.826728 | 2.313691e-54 | -8.615850e-47 |
| Msa0203520 | Msa0758860 | 0.801074 | 1.068940e-48 | -8.615850e-47 |
| Msa0203520 | Msa0761790 | 0.830582 | 2.707851e-55 | -8.615850e-47 |
| Msa0203520 | Msa0770430 | 0.816699 | 4.832628e-52 | -8.615850e-47 |
| Msa0203520 | Msa0780140 | 0.813564 | 2.401384e-51 | -8.615850e-47 |
| Msa0203520 | Msa0780750 | 0.833648 | 4.725567e-56 | -8.615850e-47 |
| Msa0203520 | Msa0790180 | 0.844929 | 5.576477e-59 | -8.615850e-47 |
| Msa0203520 | Msa0795850 | 0.811802 | 5.835003e-51 | -8.615850e-47 |
| Msa0203520 | Msa0802210 | 0.810593 | 1.067085e-50 | -8.615850e-47 |
| Msa0203520 | Msa0803130 | 0.814151 | 1.782700e-51 | -8.615850e-47 |
| Msa0203520 | Msa0804110 | 0.821060 | 4.934726e-53 | -8.615850e-47 |
| Msa0203520 | Msa0810370 | 0.806176 | 9.338852e-50 | -8.615850e-47 |
| Msa0203520 | Msa0811510 | 0.805039 | 1.617939e-49 | -8.615850e-47 |
| Msa0203520 | Msa0814760 | 0.803860 | 2.849831e-49 | -8.615850e-47 |
| Msa0203520 | Msa0841490 | 0.805987 | 1.023455e-49 | -8.615850e-47 |
| Msa0203520 | Msa0842220 | 0.809582 | 1.762334e-50 | -8.615850e-47 |
| Msa0203520 | Msa0843690 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0203520 | Msa0854590 | 0.812854 | 3.437619e-51 | -8.615850e-47 |
| Msa0203520 | Msa0864150 | 0.814901 | 1.216544e-51 | -8.615850e-47 |
| Msa0203520 | Msa0870010 | 0.839270 | 1.751586e-57 | -8.615850e-47 |
| Msa0203520 | Msa0875360 | 0.818384 | 2.016364e-52 | -8.615850e-47 |
| Msa0203520 | Msa0884730 | 0.801598 | 8.349355e-49 | -8.615850e-47 |
| Msa0203520 | Msa0890250 | 0.823350 | 1.452551e-53 | -8.615850e-47 |
| Msa0203520 | Msa0922770 | 0.802482 | 5.493821e-49 | -8.615850e-47 |
| Msa0203520 | Msa0925160 | 0.855783 | 5.002939e-62 | -8.615850e-47 |
| Msa0203520 | Msa0926860 | 0.819885 | 9.180710e-53 | -8.615850e-47 |
| Msa0203520 | Msa0930330 | 0.812630 | 3.848648e-51 | -8.615850e-47 |
| Msa0203520 | Msa0931480 | 0.802271 | 6.072271e-49 | -8.615850e-47 |
| Msa0203520 | Msa0946650 | 0.828143 | 1.059039e-54 | -8.615850e-47 |
| Msa0203520 | Msa0955260 | 0.866097 | 3.658212e-65 | -8.615850e-47 |
| Msa0203520 | Msa0958020 | 0.804993 | 1.654686e-49 | -8.615850e-47 |
| Msa0203520 | Msa0990520 | 0.824534 | 7.662683e-54 | -8.615850e-47 |
| Msa0203520 | Msa0992570 | 0.807460 | 4.999616e-50 | -8.615850e-47 |
| Msa0203520 | Msa0992590 | 0.829581 | 4.751344e-55 | -8.615850e-47 |
| Msa0203520 | Msa1002040 | 0.813437 | 2.560978e-51 | -8.615850e-47 |
| Msa0203520 | Msa1004500 | 0.814674 | 1.365975e-51 | -8.615850e-47 |
| Msa0203520 | Msa1004520 | 0.813203 | 2.882212e-51 | -8.615850e-47 |
| Msa0203520 | Msa1011210 | 0.825172 | 5.417573e-54 | -8.615850e-47 |
| Msa0203520 | Msa1013510 | 0.831166 | 1.947197e-55 | -8.615850e-47 |
| Msa0203520 | Msa1022310 | 0.814147 | 1.786651e-51 | -8.615850e-47 |
| Msa0203520 | Msa1027790 | 0.840703 | 7.410032e-58 | -8.615850e-47 |
| Msa0203520 | Msa1028460 | 0.886785 | 2.527844e-72 | -8.615850e-47 |
| Msa0203520 | Msa1029320 | 0.815394 | 9.453511e-52 | -8.615850e-47 |
| Msa0203520 | Msa1030870 | 0.814915 | 1.207771e-51 | -8.615850e-47 |
| Msa0203520 | Msa1032970 | 0.850204 | 1.974805e-60 | -8.615850e-47 |
| Msa0203520 | Msa1044340 | 0.800500 | 1.400052e-48 | -8.615850e-47 |
| Msa0203520 | Msa1061180 | 0.809889 | 1.513788e-50 | -8.615850e-47 |
| Msa0203520 | Msa1067430 | 0.813278 | 2.775431e-51 | -8.615850e-47 |
| Msa0203520 | Msa1072080 | 0.812230 | 4.706692e-51 | -8.615850e-47 |
| Msa0203520 | Msa1075120 | 0.800523 | 1.385173e-48 | -8.615850e-47 |
| Msa0203520 | Msa1080620 | 0.832550 | 8.867814e-56 | -8.615850e-47 |
| Msa0203520 | Msa1080690 | 0.829722 | 4.390015e-55 | -8.615850e-47 |
| Msa0203520 | Msa1084150 | 0.821986 | 3.015536e-53 | -8.615850e-47 |
| Msa0203520 | Msa1084490 | 0.839525 | 1.504148e-57 | -8.615850e-47 |
| Msa0203520 | Msa1097850 | 0.800100 | 1.688763e-48 | -8.615850e-47 |
| Msa0203520 | Msa1106560 | 0.843353 | 1.476781e-58 | -8.615850e-47 |
| Msa0203520 | Msa1106580 | 0.828399 | 9.187461e-55 | -8.615850e-47 |
| Msa0203520 | Msa1112610 | 0.834604 | 2.723122e-56 | -8.615850e-47 |
| Msa0203520 | Msa1117690 | 0.855082 | 8.007441e-62 | -8.615850e-47 |
| Msa0203520 | Msa1121630 | 0.823042 | 1.713459e-53 | -8.615850e-47 |
| Msa0203520 | Msa1125780 | 0.826112 | 3.243824e-54 | -8.615850e-47 |
| Msa0203520 | Msa1125950 | 0.828647 | 8.003055e-55 | -8.615850e-47 |
| Msa0203520 | Msa1126310 | 0.839423 | 1.599147e-57 | -8.615850e-47 |
| Msa0203520 | Msa1127510 | 0.818234 | 2.180110e-52 | -8.615850e-47 |
| Msa0203520 | Msa1129720 | 0.825446 | 4.667529e-54 | -8.615850e-47 |
| Msa0203520 | Msa1131470 | 0.887061 | 1.986330e-72 | -8.615850e-47 |
| Msa0203520 | Msa1132820 | 0.811806 | 5.823964e-51 | -8.615850e-47 |
| Msa0203520 | Msa1134400 | 0.802809 | 4.703560e-49 | -8.615850e-47 |
| Msa0203520 | Msa1148780 | 0.803752 | 3.001047e-49 | -8.615850e-47 |
| Msa0203520 | Msa1154670 | 0.814740 | 1.320922e-51 | -8.615850e-47 |
| Msa0203520 | Msa1156210 | 0.816445 | 5.509752e-52 | -8.615850e-47 |
| Msa0203520 | Msa1159100 | 0.824595 | 7.412873e-54 | -8.615850e-47 |
| Msa0203520 | Msa1166180 | 0.850863 | 1.289842e-60 | -8.615850e-47 |
| Msa0203520 | Msa1166280 | 0.847043 | 1.484385e-59 | -8.615850e-47 |
| Msa0203520 | Msa1167160 | 0.825740 | 3.975859e-54 | -8.615850e-47 |
| Msa0203520 | Msa1171340 | 0.835585 | 1.539929e-56 | -8.615850e-47 |
| Msa0203520 | Msa1175750 | 0.801792 | 7.619063e-49 | -8.615850e-47 |
| Msa0203520 | Msa1177240 | 0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa0203520 | Msa1183390 | 0.827567 | 1.456494e-54 | -8.615850e-47 |
| Msa0203520 | Msa1183610 | 0.859053 | 5.396271e-63 | -8.615850e-47 |
| Msa0203520 | Msa1183760 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
| Msa0203520 | Msa1194300 | 0.814554 | 1.451888e-51 | -8.615850e-47 |
| Msa0203520 | Msa1194330 | 0.822857 | 1.892785e-53 | -8.615850e-47 |
| Msa0203520 | Msa1197110 | 0.836049 | 1.174985e-56 | -8.615850e-47 |
| Msa0203520 | Msa1200920 | 0.818561 | 1.838662e-52 | -8.615850e-47 |
| Msa0203520 | Msa1208750 | 0.800528 | 1.381313e-48 | -8.615850e-47 |
| Msa0203520 | Msa1210770 | 0.832355 | 9.911471e-56 | -8.615850e-47 |
| Msa0203520 | Msa1219250 | 0.859649 | 3.573762e-63 | -8.615850e-47 |
| Msa0203520 | Msa1220450 | -0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0203520 | Msa1220460 | -0.808872 | 2.501234e-50 | -8.615850e-47 |
| Msa0203520 | Msa1220480 | -0.807876 | 4.079742e-50 | -8.615850e-47 |
| Msa0203520 | Msa1223840 | 0.849719 | 2.699706e-60 | -8.615850e-47 |
| Msa0203520 | Msa1224670 | 0.812598 | 3.912246e-51 | -8.615850e-47 |
| Msa0203520 | Msa1228950 | 0.816650 | 4.958463e-52 | -8.615850e-47 |
| Msa0203520 | Msa1229050 | 0.802996 | 4.302955e-49 | -8.615850e-47 |
| Msa0203520 | Msa1235890 | 0.802415 | 5.672104e-49 | -8.615850e-47 |
| Msa0203520 | Msa1243170 | 0.812293 | 4.560609e-51 | -8.615850e-47 |
| Msa0203520 | Msa1250670 | 0.802193 | 6.301089e-49 | -8.615850e-47 |
| Msa0203520 | Msa1258940 | 0.831559 | 1.558601e-55 | -8.615850e-47 |
| Msa0203520 | Msa1259470 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
| Msa0203520 | Msa1262310 | 0.824414 | 8.176850e-54 | -8.615850e-47 |
| Msa0203520 | Msa1263030 | 0.833624 | 4.792489e-56 | -8.615850e-47 |
| Msa0203520 | Msa1263590 | 0.808720 | 2.695676e-50 | -8.615850e-47 |
| Msa0203520 | Msa1263670 | 0.814202 | 1.737288e-51 | -8.615850e-47 |
| Msa0203520 | Msa1264110 | 0.859676 | 3.508856e-63 | -8.615850e-47 |
| Msa0203520 | Msa1264560 | 0.802511 | 5.419449e-49 | -8.615850e-47 |
| Msa0203520 | Msa1271490 | 0.800127 | 1.667277e-48 | -8.615850e-47 |
| Msa0203520 | Msa1271510 | 0.835773 | 1.380296e-56 | -8.615850e-47 |
| Msa0203520 | Msa1271600 | 0.869562 | 2.821843e-66 | -8.615850e-47 |
| Msa0203520 | Msa1274740 | 0.800464 | 1.423986e-48 | -8.615850e-47 |
| Msa0203520 | Msa1276840 | 0.802571 | 5.266124e-49 | -8.615850e-47 |
| Msa0203520 | Msa1279700 | 0.804583 | 2.014977e-49 | -8.615850e-47 |
| Msa0203520 | Msa1283770 | 0.801376 | 9.269675e-49 | -8.615850e-47 |
| Msa0203520 | Msa1284520 | 0.805215 | 1.486382e-49 | -8.615850e-47 |
| Msa0203520 | Msa1288190 | 0.840398 | 8.906611e-58 | -8.615850e-47 |
| Msa0203520 | Msa1293530 | 0.826340 | 2.862930e-54 | -8.615850e-47 |
| Msa0203520 | Msa1303750 | 0.855165 | 7.575471e-62 | -8.615850e-47 |
| Msa0203520 | Msa1303810 | 0.821913 | 3.135760e-53 | -8.615850e-47 |
| Msa0203520 | Msa1305520 | 0.809095 | 2.240979e-50 | -8.615850e-47 |
| Msa0203520 | Msa1305650 | 0.817898 | 2.597357e-52 | -8.615850e-47 |
| Msa0203520 | Msa1309240 | 0.826156 | 3.167100e-54 | -8.615850e-47 |
| Msa0203520 | Msa1309360 | 0.812235 | 4.694474e-51 | -8.615850e-47 |
| Msa0203520 | Msa1312730 | 0.803082 | 4.130635e-49 | -8.615850e-47 |
| Msa0203520 | Msa1315980 | 0.809427 | 1.902300e-50 | -8.615850e-47 |
| Msa0203520 | Msa1317030 | 0.806370 | 8.502613e-50 | -8.615850e-47 |
| Msa0203520 | Msa1325650 | 0.812215 | 4.742569e-51 | -8.615850e-47 |
| Msa0203520 | Msa1341930 | 0.805348 | 1.394426e-49 | -8.615850e-47 |
| Msa0203520 | Msa1344430 | 0.800862 | 1.180944e-48 | -8.615850e-47 |
| Msa0203520 | Msa1354040 | 0.810433 | 1.155267e-50 | -8.615850e-47 |
| Msa0203520 | Msa1356200 | 0.841086 | 5.882550e-58 | -8.615850e-47 |
| Msa0203520 | Msa1363080 | 0.848321 | 6.602921e-60 | -8.615850e-47 |
| Msa0203520 | Msa1365640 | -0.801827 | 7.492971e-49 | -8.615850e-47 |
| Msa0203520 | Msa1365870 | 0.871996 | 4.461969e-67 | -8.615850e-47 |
| Msa0203520 | Msa1375630 | 0.834563 | 2.788541e-56 | -8.615850e-47 |
| Msa0203520 | Msa1376400 | 0.805314 | 1.417400e-49 | -8.615850e-47 |
| Msa0203520 | Msa1376530 | 0.851029 | 1.157943e-60 | -8.615850e-47 |
| Msa0203520 | Msa1376590 | 0.830053 | 3.647321e-55 | -8.615850e-47 |
| Msa0203520 | Msa1376640 | 0.836745 | 7.813663e-57 | -8.615850e-47 |
| Msa0203520 | Msa1381130 | 0.830052 | 3.648510e-55 | -8.615850e-47 |
| Msa0203520 | Msa1382310 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0203520 | Msa1385620 | 0.801532 | 8.613916e-49 | -8.615850e-47 |
| Msa0203520 | Msa1391430 | 0.805956 | 1.039150e-49 | -8.615850e-47 |
| Msa0203520 | Msa1393530 | 0.808461 | 3.061649e-50 | -8.615850e-47 |
| Msa0203520 | Msa1398480 | 0.814760 | 1.307211e-51 | -8.615850e-47 |
| Msa0203520 | Msa1398740 | 0.805702 | 1.174837e-49 | -8.615850e-47 |
| Msa0203520 | Msa1398840 | 0.823319 | 1.477012e-53 | -8.615850e-47 |
| Msa0203520 | Msa1404370 | 0.802378 | 5.772630e-49 | -8.615850e-47 |
| Msa0203520 | Msa1405770 | 0.846866 | 1.659483e-59 | -8.615850e-47 |
| Msa0203520 | Msa1406880 | 0.807880 | 4.072956e-50 | -8.615850e-47 |
| Msa0203520 | Msa1407710 | 0.844384 | 7.817856e-59 | -8.615850e-47 |
| Msa0203520 | Msa1410170 | 0.850543 | 1.586812e-60 | -8.615850e-47 |
| Msa0203520 | Msa1412520 | 0.819368 | 1.205089e-52 | -8.615850e-47 |
| Msa0203520 | Msa1414970 | 0.812693 | 3.728567e-51 | -8.615850e-47 |
| Msa0203520 | Msa1415250 | 0.817044 | 4.044693e-52 | -8.615850e-47 |
| Msa0203520 | Msa1416460 | 0.804625 | 1.974179e-49 | -8.615850e-47 |
| Msa0203520 | Msa1418200 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
| Msa0203520 | Msa1418600 | 0.833346 | 5.621803e-56 | -8.615850e-47 |
| Msa0203520 | Msa1426290 | 0.821862 | 3.221114e-53 | -8.615850e-47 |
| Msa0203520 | Msa1430270 | 0.805564 | 1.256106e-49 | -8.615850e-47 |
| Msa0203520 | Msa1437320 | 0.831860 | 1.313742e-55 | -8.615850e-47 |
| Msa0203520 | Msa1442030 | 0.841572 | 4.381691e-58 | -8.615850e-47 |
| Msa0203520 | Msa1449600 | 0.825165 | 5.439900e-54 | -8.615850e-47 |
| Msa0203520 | Msa1449880 | 0.846157 | 2.589954e-59 | -8.615850e-47 |
| Msa0203520 | Msa1456830 | 0.813604 | 2.353032e-51 | -8.615850e-47 |
| Msa0203520 | Msa1458330 | 0.819585 | 1.074922e-52 | -8.615850e-47 |
| Msa0203520 | Msa1460650 | 0.861398 | 1.055107e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203520 | MtrunA17_Chr2g0301241 | 97.638 | 254 | 6 | 0 | 1 | 254 | 1 | 254 | 0.0 | 497 |
| Msa0203520 | MtrunA17_Chr4g0070201 | 75.294 | 255 | 60 | 2 | 1 | 254 | 1 | 253 | 1.02e-139 | 392 |
| Msa0203520 | MtrunA17_Chr3g0139681 | 38.947 | 95 | 56 | 2 | 159 | 253 | 3 | 95 | 4.64e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203520 | AT5G20720.1 | 71.484 | 256 | 68 | 2 | 1 | 254 | 1 | 253 | 4.75e-129 | 365 |
| Msa0203520 | AT5G20720.2 | 71.484 | 256 | 68 | 2 | 1 | 254 | 1 | 253 | 4.75e-129 | 365 |
| Msa0203520 | AT5G20720.4 | 71.484 | 256 | 68 | 2 | 1 | 254 | 1 | 253 | 4.75e-129 | 365 |
| Msa0203520 | AT5G20720.3 | 71.484 | 256 | 68 | 2 | 1 | 254 | 1 | 253 | 4.75e-129 | 365 |
Find 97 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTCATTACCGGCGTATT+TGG | 0.270458 | 2_1:-27436410 | None:intergenic |
| TTTCTCAAATATTGCTCATC+TGG | 0.297071 | 2_1:-27436675 | None:intergenic |
| CTCTCTCCAACAACAAATTA+AGG | 0.304689 | 2_1:+27433562 | Msa0203520:five_prime_UTR |
| CTTAAACTACTAACTAAAAC+TGG | 0.340415 | 2_1:-27436887 | None:intergenic |
| AAGTGATTCCTAACGGGAAC+TGG | 0.346232 | 2_1:+27436550 | Msa0203520:three_prime_UTR |
| GCAATATTTGAGAAACAAAT+AGG | 0.350657 | 2_1:+27436683 | Msa0203520:three_prime_UTR |
| TGTCATGGCTGTACTCTCTT+AGG | 0.357059 | 2_1:+27436477 | Msa0203520:CDS |
| CGATAAGATGCATTTGATAA+TGG | 0.373981 | 2_1:+27436781 | Msa0203520:three_prime_UTR |
| GTTGGAGAGAGTAGATAGAT+TGG | 0.376813 | 2_1:-27433550 | None:intergenic |
| TTCATTCTCCTCGACATGTT+AGG | 0.384514 | 2_1:+27433780 | Msa0203520:CDS |
| CTATCAAGCCTTTGGGTGAC+AGG | 0.400365 | 2_1:+27435062 | Msa0203520:CDS |
| AGGAGCTTTGCATCCTTTGA+AGG | 0.401756 | 2_1:+27433734 | Msa0203520:CDS |
| GTACACTGCTATCAAGCCTT+TGG | 0.402510 | 2_1:+27435054 | Msa0203520:intron |
| GGCTTTGTTTGAGCACTTGA+TGG | 0.405445 | 2_1:-27435139 | None:intergenic |
| GAACGATAGAGTTCTGATAA+AGG | 0.408424 | 2_1:+27435481 | Msa0203520:CDS |
| AAGCTTACTGTTCCAAATGA+AGG | 0.410647 | 2_1:-27436001 | None:intergenic |
| TTTGCCCTTGAAGTCATTAC+CGG | 0.412440 | 2_1:-27436419 | None:intergenic |
| TAATTGAAAGGTATCTATCT+TGG | 0.415866 | 2_1:+27436833 | Msa0203520:three_prime_UTR |
| TATCAGAACTCTATCGTTCA+AGG | 0.418147 | 2_1:-27435477 | None:intergenic |
| ACCAAGGAGAAACCTTCATT+TGG | 0.419164 | 2_1:+27435989 | Msa0203520:CDS |
| TGCTTACCTTAATTTGTTGT+TGG | 0.423268 | 2_1:-27433568 | None:intergenic |
| TCCTGCTCGTAGGTCCTTCA+AGG | 0.426073 | 2_1:+27433811 | Msa0203520:CDS |
| CCTTCACACTAATTTCAACT+TGG | 0.433049 | 2_1:-27435213 | None:intergenic |
| CCTTGATATCATCAGTTTCA+AGG | 0.440736 | 2_1:-27435445 | None:intergenic |
| CAGGTGGTAGCAGTTGGTCC+CGG | 0.442169 | 2_1:+27436322 | Msa0203520:intron |
| TGGTCCCGGGCTTGTGGATG+AGG | 0.443053 | 2_1:+27436336 | Msa0203520:CDS |
| TTGGACAGTGAAACTGTAAA+TGG | 0.445194 | 2_1:+27433676 | Msa0203520:intron |
| GCCTTCCTCATCCACAAGCC+CGG | 0.445614 | 2_1:-27436341 | None:intergenic |
| TTGGAGAGAGTAGATAGATT+GGG | 0.448206 | 2_1:-27433549 | None:intergenic |
| TCCAAATGAAGGTTTCTCCT+TGG | 0.449870 | 2_1:-27435990 | None:intergenic |
| GAATGAAACTGAACACTTGA+TGG | 0.466209 | 2_1:-27433764 | None:intergenic |
| TACACTGCTATCAAGCCTTT+GGG | 0.469733 | 2_1:+27435055 | Msa0203520:CDS |
| ATTACCAAGTGATTCCTAAC+GGG | 0.475609 | 2_1:+27436544 | Msa0203520:three_prime_UTR |
| ATAGATTGGGTTAGATAAAG+TGG | 0.476335 | 2_1:-27433536 | None:intergenic |
| CCTTGAAACTGATGATATCA+AGG | 0.481354 | 2_1:+27435445 | Msa0203520:CDS |
| AATGACTTCAAGGGCAAAGA+TGG | 0.482709 | 2_1:+27436424 | Msa0203520:CDS |
| ATACGCCGGTAATGACTTCA+AGG | 0.486053 | 2_1:+27436414 | Msa0203520:CDS |
| TTTGACAATCAAAGCCTTGA+AGG | 0.489756 | 2_1:-27433825 | None:intergenic |
| AATTGAAAGGTATCTATCTT+GGG | 0.489770 | 2_1:+27436834 | Msa0203520:three_prime_UTR |
| TTGAAAACCCAGTTCCCGTT+AGG | 0.491683 | 2_1:-27436558 | None:intergenic |
| TCTCCTCGACATGTTAGGAT+TGG | 0.500033 | 2_1:+27433785 | Msa0203520:CDS |
| AAACCTTTGACTGTTACTCC+TGG | 0.503322 | 2_1:+27436370 | Msa0203520:CDS |
| CTGAAGGATGATGACATTGT+TGG | 0.506319 | 2_1:+27435419 | Msa0203520:CDS |
| ATACATGCTGCAGATTGAAA+AGG | 0.520194 | 2_1:+27435925 | Msa0203520:intron |
| TTCAAAGTATGCTGGTACTG+AGG | 0.520573 | 2_1:+27435367 | Msa0203520:CDS |
| AGGTGGTAGCAGTTGGTCCC+GGG | 0.520936 | 2_1:+27436323 | Msa0203520:intron |
| GCCTTGAAGGACCTACGAGC+AGG | 0.526587 | 2_1:-27433812 | None:intergenic |
| AGCAGTTGGTCCCGGGCTTG+TGG | 0.527000 | 2_1:+27436330 | Msa0203520:CDS |
| GAGGTGGTTGCCGTTGGAGA+AGG | 0.528875 | 2_1:+27435172 | Msa0203520:CDS |
| CTTGAGGAGTTCAGATGTCA+TGG | 0.532308 | 2_1:+27436462 | Msa0203520:CDS |
| CAGCTCCAGGTATAATTGAA+AGG | 0.532327 | 2_1:+27436821 | Msa0203520:three_prime_UTR |
| GGTACTGAGGTGGACTTCAA+TGG | 0.535132 | 2_1:+27435380 | Msa0203520:CDS |
| ATCAGAACTCTATCGTTCAA+GGG | 0.538758 | 2_1:-27435476 | None:intergenic |
| GAGTACAGAACTGTGTTCCC+AGG | 0.548022 | 2_1:-27436388 | None:intergenic |
| TTCCCAGGAGTAACAGTCAA+AGG | 0.549921 | 2_1:-27436373 | None:intergenic |
| CTCAAATATTGCTCATCTGG+TGG | 0.553558 | 2_1:-27436672 | None:intergenic |
| CCCGGGCTTGTGGATGAGGA+AGG | 0.557286 | 2_1:+27436340 | Msa0203520:CDS |
| GTTGTCTATTCAAAGTATGC+TGG | 0.560205 | 2_1:+27435359 | Msa0203520:CDS |
| GGAGGTGAGGTGGTTGCCGT+TGG | 0.560930 | 2_1:+27435166 | Msa0203520:CDS |
| AACCTTTGACTGTTACTCCT+GGG | 0.561302 | 2_1:+27436371 | Msa0203520:CDS |
| CCAAGTTGAAATTAGTGTGA+AGG | 0.567424 | 2_1:+27435213 | Msa0203520:CDS |
| AGATACCTTTCAATTATACC+TGG | 0.567619 | 2_1:-27436826 | None:intergenic |
| AAGTGTCTTTCCTTCTCCAA+CGG | 0.569767 | 2_1:-27435182 | None:intergenic |
| CCTTCCTCATCCACAAGCCC+GGG | 0.573609 | 2_1:-27436340 | None:intergenic |
| TGAAAAGCATCTTATTCTGA+AGG | 0.574274 | 2_1:+27435403 | Msa0203520:CDS |
| GAATAGACAACTTGTGCACC+TGG | 0.575907 | 2_1:-27435347 | None:intergenic |
| GATTACCAAGTGATTCCTAA+CGG | 0.577576 | 2_1:+27436543 | Msa0203520:three_prime_UTR |
| GTTGGAGAAGGAAAGACACT+TGG | 0.579860 | 2_1:+27435184 | Msa0203520:CDS |
| AGTGATTCCTAACGGGAACT+GGG | 0.582781 | 2_1:+27436551 | Msa0203520:three_prime_UTR |
| AGGCGGTTTGTTTCTTACAG+AGG | 0.589539 | 2_1:+27435964 | Msa0203520:CDS |
| CAGAAGAGAAGACTCAGAGT+GGG | 0.589594 | 2_1:+27435107 | Msa0203520:CDS |
| ATGTCACAGGTGGTAGCAGT+TGG | 0.591495 | 2_1:+27436316 | Msa0203520:intron |
| TGATGGTCGAAGTCCTTCAA+AGG | 0.597517 | 2_1:-27433747 | None:intergenic |
| TATCAAGCCTTTGGGTGACA+GGG | 0.600106 | 2_1:+27435063 | Msa0203520:CDS |
| CATGACATCTGAACTCCTCA+AGG | 0.608574 | 2_1:-27436461 | None:intergenic |
| ATAAGTACCCTGTCACCCAA+AGG | 0.609358 | 2_1:-27435070 | None:intergenic |
| GTTTCTTACAGAGGCAACCA+AGG | 0.611857 | 2_1:+27435973 | Msa0203520:CDS |
| AACAAAGCCTCAAGGAGGTG+AGG | 0.613391 | 2_1:+27435153 | Msa0203520:CDS |
| AAAGTATGCTGGTACTGAGG+TGG | 0.625111 | 2_1:+27435370 | Msa0203520:CDS |
| TTTGATAATGGAAAATCATG+TGG | 0.627825 | 2_1:+27436793 | Msa0203520:three_prime_UTR |
| AGTTCCCGTTAGGAATCACT+TGG | 0.628468 | 2_1:-27436548 | None:intergenic |
| CATGCTGCAGATTGAAAAGG+CGG | 0.628631 | 2_1:+27435928 | Msa0203520:intron |
| GCAGAAGAGAAGACTCAGAG+TGG | 0.644549 | 2_1:+27435106 | Msa0203520:CDS |
| TTACCAATCCTAACATGTCG+AGG | 0.645053 | 2_1:-27433788 | None:intergenic |
| AGTGCTCAAACAAAGCCTCA+AGG | 0.651229 | 2_1:+27435145 | Msa0203520:CDS |
| GGATTGGTAATCCTGCTCGT+AGG | 0.652074 | 2_1:+27433801 | Msa0203520:CDS |
| TTGGAGAAGGAAAGACACTT+GGG | 0.658187 | 2_1:+27435185 | Msa0203520:CDS |
| TCTTATCTAATAAATGACAA+AGG | 0.658340 | 2_1:-27436639 | None:intergenic |
| GCAACCACCTCACCTCCTTG+AGG | 0.660430 | 2_1:-27435160 | None:intergenic |
| AAAGCCTCAAGGAGGTGAGG+TGG | 0.661356 | 2_1:+27435156 | Msa0203520:CDS |
| TGAAAGGTATCTATCTTGGG+AGG | 0.670598 | 2_1:+27436837 | Msa0203520:three_prime_UTR |
| ATCACTTGGTAATCAAAACA+AGG | 0.676030 | 2_1:-27436534 | None:intergenic |
| TACGCCGGTAATGACTTCAA+GGG | 0.678826 | 2_1:+27436415 | Msa0203520:CDS |
| GCTCAAACAAAGCCTCAAGG+AGG | 0.723993 | 2_1:+27435148 | Msa0203520:CDS |
| CAGCATCGTCAATTTCAACG+AGG | 0.727617 | 2_1:+27433714 | Msa0203520:CDS |
| GTTCTGTACTCCAAATACGC+CGG | 0.743437 | 2_1:+27436400 | Msa0203520:CDS |
| AGAATGAAAATAAACCTTGG+GGG | 0.751739 | 2_1:-27433864 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAACTAAATTAAATTAAA+TGG | - | chr2_1:27433999-27434018 | None:intergenic | 10.0% |
| !!! | GTATTTAAATTATAATTTGT+TGG | + | chr2_1:27434143-27434162 | Msa0203520:intron | 10.0% |
| !!! | TTGCTATTATAATGTTATTT+TGG | + | chr2_1:27433932-27433951 | Msa0203520:intron | 15.0% |
| !!! | TGCTATTATAATGTTATTTT+GGG | + | chr2_1:27433933-27433952 | Msa0203520:intron | 15.0% |
| !!! | ATCATTCTTTAATTTTTCTT+GGG | + | chr2_1:27435274-27435293 | Msa0203520:intron | 15.0% |
| !! | AAAAACATTATTGTAATACT+TGG | + | chr2_1:27436293-27436312 | Msa0203520:intron | 15.0% |
| !! | AAAGAATGAAAATAAACCTT+GGG | - | chr2_1:27433869-27433888 | None:intergenic | 20.0% |
| !! | AAAAGAATGAAAATAAACCT+TGG | - | chr2_1:27433870-27433889 | None:intergenic | 20.0% |
| !!! | TAATGTTATTTTGGGTTAAT+TGG | + | chr2_1:27433941-27433960 | Msa0203520:intron | 20.0% |
| !!! | AATGTTATTTTGGGTTAATT+GGG | + | chr2_1:27433942-27433961 | Msa0203520:intron | 20.0% |
| !! | ATAAAATTGCTCTTTCAAAT+TGG | + | chr2_1:27434193-27434212 | Msa0203520:intron | 20.0% |
| !! | TTTGATATTTGATAAATTCG+AGG | + | chr2_1:27434341-27434360 | Msa0203520:intron | 20.0% |
| !!! | TATAATTTTGATGTTGAATG+TGG | + | chr2_1:27434485-27434504 | Msa0203520:intron | 20.0% |
| !! | AATTAAAACAAAAAGACATC+TGG | - | chr2_1:27434761-27434780 | None:intergenic | 20.0% |
| !! | ATCATAAAATTGTGAAAAGT+CGG | - | chr2_1:27434993-27435012 | None:intergenic | 20.0% |
| !!! | GATCATTCTTTAATTTTTCT+TGG | + | chr2_1:27435273-27435292 | Msa0203520:intron | 20.0% |
| !! | ATACATTAACTATAGAGATA+AGG | - | chr2_1:27436139-27436158 | None:intergenic | 20.0% |
| !! | TCTTATCTAATAAATGACAA+AGG | - | chr2_1:27436642-27436661 | None:intergenic | 20.0% |
| !!! | TTGCATTGCAATTTTTTGTT+TGG | - | chr2_1:27433387-27433406 | None:intergenic | 25.0% |
| ! | ACAAAAAATTGCAATGCAAT+TGG | + | chr2_1:27433388-27433407 | Msa0203520:five_prime_UTR | 25.0% |
| ! | AAAAATGAATAAGATTGGGA+GGG | - | chr2_1:27433474-27433493 | None:intergenic | 25.0% |
| ! | TAAAAATGAATAAGATTGGG+AGG | - | chr2_1:27433475-27433494 | None:intergenic | 25.0% |
| !!! | TCCCAATCTTATTCATTTTT+AGG | + | chr2_1:27433474-27433493 | Msa0203520:five_prime_UTR | 25.0% |
| ! | CCCTAAAAATGAATAAGATT+GGG | - | chr2_1:27433478-27433497 | None:intergenic | 25.0% |
| !!! | CCCAATCTTATTCATTTTTA+GGG | + | chr2_1:27433475-27433494 | Msa0203520:five_prime_UTR | 25.0% |
| ! | ACCCTAAAAATGAATAAGAT+TGG | - | chr2_1:27433479-27433498 | None:intergenic | 25.0% |
| !!! | ATCCTTGTTATTTATTGTGT+TGG | + | chr2_1:27433657-27433676 | Msa0203520:intron | 25.0% |
| ! | AAGAATGAAAATAAACCTTG+GGG | - | chr2_1:27433868-27433887 | None:intergenic | 25.0% |
| !!! | ATTGAAGAAAGTTGTCATTT+TGG | + | chr2_1:27434030-27434049 | Msa0203520:intron | 25.0% |
| ! | ATTTGAGTAAATAAGCGATT+TGG | + | chr2_1:27434120-27434139 | Msa0203520:intron | 25.0% |
| ! | TTTGAGTAAATAAGCGATTT+GGG | + | chr2_1:27434121-27434140 | Msa0203520:intron | 25.0% |
| ! | TTTGATAAATTCGAGGTTAT+TGG | + | chr2_1:27434348-27434367 | Msa0203520:intron | 25.0% |
| !! | AAGCAAAATAACACCATTTT+GGG | - | chr2_1:27434395-27434414 | None:intergenic | 25.0% |
| !! | TAAGCAAAATAACACCATTT+TGG | - | chr2_1:27434396-27434415 | None:intergenic | 25.0% |
| !! | ATAATGAGTAGCATTTTACT+CGG | + | chr2_1:27434444-27434463 | Msa0203520:intron | 25.0% |
| ! | AACTGTGCATCAAAATTAAA+GGG | - | chr2_1:27434522-27434541 | None:intergenic | 25.0% |
| ! | AAACTGTGCATCAAAATTAA+AGG | - | chr2_1:27434523-27434542 | None:intergenic | 25.0% |
| ! | TTCAATGTAATTACAAGTGT+CGG | - | chr2_1:27434661-27434680 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr2_1:27434692-27434711 | Msa0203520:intron | 25.0% |
| ! | AAATCGCATAATTGTTGTAT+TGG | + | chr2_1:27434943-27434962 | Msa0203520:intron | 25.0% |
| !! | CAGGGTACTTATAAAAATAA+AGG | + | chr2_1:27435081-27435100 | Msa0203520:CDS | 25.0% |
| ! | AATTAAAGAATGATCATCGA+AGG | - | chr2_1:27435268-27435287 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTCTTGGGAAGA+AGG | + | chr2_1:27435281-27435300 | Msa0203520:intron | 25.0% |
| !! | TTAATTTTTCTTGGGAAGAA+GGG | + | chr2_1:27435282-27435301 | Msa0203520:intron | 25.0% |
| !! | ATATAAGCAAAACTCTAAAG+AGG | - | chr2_1:27435512-27435531 | None:intergenic | 25.0% |
| !! | AGTTTTGCTTATATTCTTGT+TGG | + | chr2_1:27435518-27435537 | Msa0203520:intron | 25.0% |
| ! | AGTGATGAAAACAAAATCAA+CGG | + | chr2_1:27435623-27435642 | Msa0203520:intron | 25.0% |
| ! | AGTTGAACAAAATATGACAT+GGG | - | chr2_1:27435807-27435826 | None:intergenic | 25.0% |
| ! | AAGTTGAACAAAATATGACA+TGG | - | chr2_1:27435808-27435827 | None:intergenic | 25.0% |
| !! | AACATGTTTTCAAACAAAGA+AGG | - | chr2_1:27436037-27436056 | None:intergenic | 25.0% |
| ! | TTAAATCTTAAGTGGATGTT+GGG | - | chr2_1:27436068-27436087 | None:intergenic | 25.0% |
| ! | TTTAAATCTTAAGTGGATGT+TGG | - | chr2_1:27436069-27436088 | None:intergenic | 25.0% |
| ! | TGCTACATTTAAATCTTAAG+TGG | - | chr2_1:27436076-27436095 | None:intergenic | 25.0% |
| !! | TATCCTATTTCTCATGAATA+TGG | + | chr2_1:27436247-27436266 | Msa0203520:intron | 25.0% |
| ! | GCAATATTTGAGAAACAAAT+AGG | + | chr2_1:27436683-27436702 | Msa0203520:three_prime_UTR | 25.0% |
| !!! | TTTGATAATGGAAAATCATG+TGG | + | chr2_1:27436793-27436812 | Msa0203520:three_prime_UTR | 25.0% |
| !!! | TAATTGAAAGGTATCTATCT+TGG | + | chr2_1:27436833-27436852 | Msa0203520:three_prime_UTR | 25.0% |
| !!! | AATTGAAAGGTATCTATCTT+GGG | + | chr2_1:27436834-27436853 | Msa0203520:three_prime_UTR | 25.0% |
| ! | ATAGATTGGGTTAGATAAAG+TGG | - | chr2_1:27433539-27433558 | None:intergenic | 30.0% |
| !! | TGCTTACCTTAATTTGTTGT+TGG | - | chr2_1:27433571-27433590 | None:intergenic | 30.0% |
| GTCCAACACAATAAATAACA+AGG | - | chr2_1:27433662-27433681 | None:intergenic | 30.0% | |
| AGAATGAAAATAAACCTTGG+GGG | - | chr2_1:27433867-27433886 | None:intergenic | 30.0% | |
| !!! | TCATTTTGGTTAGAAGAAAG+TGG | + | chr2_1:27434044-27434063 | Msa0203520:intron | 30.0% |
| ! | GTGCATTTGTGAATGTTTTA+AGG | + | chr2_1:27434084-27434103 | Msa0203520:intron | 30.0% |
| AAATAATTGTTTCACTCCGT+TGG | - | chr2_1:27434263-27434282 | None:intergenic | 30.0% | |
| TGAAACAATTATTTGAGCGT+GGG | + | chr2_1:27434269-27434288 | Msa0203520:intron | 30.0% | |
| TACAATTTCAAGACCCAAAA+TGG | + | chr2_1:27434379-27434398 | Msa0203520:intron | 30.0% | |
| ! | TAATGAGTAGCATTTTACTC+GGG | + | chr2_1:27434445-27434464 | Msa0203520:intron | 30.0% |
| ! | TGCTGTTTATTTATAACCAG+AGG | + | chr2_1:27434570-27434589 | Msa0203520:intron | 30.0% |
| TAATTGTTAACCACTTAGGT+TGG | + | chr2_1:27434811-27434830 | Msa0203520:intron | 30.0% | |
| !! | TGAAAAGCATCTTATTCTGA+AGG | + | chr2_1:27435403-27435422 | Msa0203520:CDS | 30.0% |
| !!! | TGAGATGTCTTACTTTTTAG+AGG | + | chr2_1:27435720-27435739 | Msa0203520:intron | 30.0% |
| ! | TTCAACTTTATTTCTCAGAC+AGG | + | chr2_1:27435820-27435839 | Msa0203520:intron | 30.0% |
| ! | ATGTTTTGCCAGAATATGTT+CGG | + | chr2_1:27436201-27436220 | Msa0203520:intron | 30.0% |
| GAACCATATTCATGAGAAAT+AGG | - | chr2_1:27436253-27436272 | None:intergenic | 30.0% | |
| ! | ATCACTTGGTAATCAAAACA+AGG | - | chr2_1:27436537-27436556 | None:intergenic | 30.0% |
| TTTCTCAAATATTGCTCATC+TGG | - | chr2_1:27436678-27436697 | None:intergenic | 30.0% | |
| CGATAAGATGCATTTGATAA+TGG | + | chr2_1:27436781-27436800 | Msa0203520:three_prime_UTR | 30.0% | |
| AGATACCTTTCAATTATACC+TGG | - | chr2_1:27436829-27436848 | None:intergenic | 30.0% | |
| TTGGAGAGAGTAGATAGATT+GGG | - | chr2_1:27433552-27433571 | None:intergenic | 35.0% | |
| CTCTCTCCAACAACAAATTA+AGG | + | chr2_1:27433562-27433581 | Msa0203520:five_prime_UTR | 35.0% | |
| TTGGACAGTGAAACTGTAAA+TGG | + | chr2_1:27433676-27433695 | Msa0203520:intron | 35.0% | |
| GAATGAAACTGAACACTTGA+TGG | - | chr2_1:27433767-27433786 | None:intergenic | 35.0% | |
| TTTGACAATCAAAGCCTTGA+AGG | - | chr2_1:27433828-27433847 | None:intergenic | 35.0% | |
| GTGAAACAATTATTTGAGCG+TGG | + | chr2_1:27434268-27434287 | Msa0203520:intron | 35.0% | |
| TTTACTCGGGCATATGTTTA+AGG | + | chr2_1:27434458-27434477 | Msa0203520:intron | 35.0% | |
| CGCATAATTGTTAACCACTT+AGG | + | chr2_1:27434807-27434826 | Msa0203520:intron | 35.0% | |
| TCGCATAATTGTTGTATTGG+AGG | + | chr2_1:27434946-27434965 | Msa0203520:intron | 35.0% | |
| ATTGTGAAAAGTCGGAACTT+TGG | - | chr2_1:27434985-27435004 | None:intergenic | 35.0% | |
| CCTTCACACTAATTTCAACT+TGG | - | chr2_1:27435216-27435235 | None:intergenic | 35.0% | |
| ! | CCAAGTTGAAATTAGTGTGA+AGG | + | chr2_1:27435213-27435232 | Msa0203520:CDS | 35.0% |
| GTTGTCTATTCAAAGTATGC+TGG | + | chr2_1:27435359-27435378 | Msa0203520:CDS | 35.0% | |
| CCTTGATATCATCAGTTTCA+AGG | - | chr2_1:27435448-27435467 | None:intergenic | 35.0% | |
| CCTTGAAACTGATGATATCA+AGG | + | chr2_1:27435445-27435464 | Msa0203520:CDS | 35.0% | |
| ATCAGAACTCTATCGTTCAA+GGG | - | chr2_1:27435479-27435498 | None:intergenic | 35.0% | |
| TATCAGAACTCTATCGTTCA+AGG | - | chr2_1:27435480-27435499 | None:intergenic | 35.0% | |
| ! | GAACGATAGAGTTCTGATAA+AGG | + | chr2_1:27435481-27435500 | Msa0203520:CDS | 35.0% |
| TATTCTTGTTGGATCCAAGT+TGG | + | chr2_1:27435529-27435548 | Msa0203520:intron | 35.0% | |
| CGAAATTGAACCACTGAATA+TGG | + | chr2_1:27435593-27435612 | Msa0203520:intron | 35.0% | |
| ACTCACTTATCCATATTCAG+TGG | - | chr2_1:27435606-27435625 | None:intergenic | 35.0% | |
| CACGCATGGATAACAATTTA+TGG | + | chr2_1:27435657-27435676 | Msa0203520:intron | 35.0% | |
| TGCAAATTATCTGATCGTCT+AGG | + | chr2_1:27435766-27435785 | Msa0203520:intron | 35.0% | |
| ! | TTTATTTCTCAGACAGGAGT+AGG | + | chr2_1:27435826-27435845 | Msa0203520:intron | 35.0% |
| AGTAGGATTCAAAGACACTA+TGG | + | chr2_1:27435843-27435862 | Msa0203520:intron | 35.0% | |
| AGACCTCAACAAAACATAAG+AGG | - | chr2_1:27435869-27435888 | None:intergenic | 35.0% | |
| ATACATGCTGCAGATTGAAA+AGG | + | chr2_1:27435925-27435944 | Msa0203520:intron | 35.0% | |
| AAGCTTACTGTTCCAAATGA+AGG | - | chr2_1:27436004-27436023 | None:intergenic | 35.0% | |
| ! | TTTTAATCAACGTCACTCGT+AGG | + | chr2_1:27436171-27436190 | Msa0203520:intron | 35.0% |
| TTGTAATACTTGGATGTCAC+AGG | + | chr2_1:27436303-27436322 | Msa0203520:intron | 35.0% | |
| !! | GTTTTGAGTACATTACCTTG+AGG | + | chr2_1:27436446-27436465 | Msa0203520:CDS | 35.0% |
| GATTACCAAGTGATTCCTAA+CGG | + | chr2_1:27436543-27436562 | Msa0203520:three_prime_UTR | 35.0% | |
| ATTACCAAGTGATTCCTAAC+GGG | + | chr2_1:27436544-27436563 | Msa0203520:three_prime_UTR | 35.0% | |
| GTTGGAGAGAGTAGATAGAT+TGG | - | chr2_1:27433553-27433572 | None:intergenic | 40.0% | |
| ! | TTGTTGTCACAGAGAGGTTT+TGG | - | chr2_1:27433613-27433632 | None:intergenic | 40.0% |
| ! | TTGTTGTTGTTGTCACAGAG+AGG | - | chr2_1:27433619-27433638 | None:intergenic | 40.0% |
| TTCATTCTCCTCGACATGTT+AGG | + | chr2_1:27433780-27433799 | Msa0203520:CDS | 40.0% | |
| TTACCAATCCTAACATGTCG+AGG | - | chr2_1:27433791-27433810 | None:intergenic | 40.0% | |
| GATATACACACCATCTCCAA+CGG | + | chr2_1:27434244-27434263 | Msa0203520:intron | 40.0% | |
| TATGAAGCACAGACACTACT+CGG | + | chr2_1:27434594-27434613 | Msa0203520:intron | 40.0% | |
| !! | GTAATTACAAGTGTCGGTGT+CGG | - | chr2_1:27434655-27434674 | None:intergenic | 40.0% |
| CACGGATACAAACACAAACA+CGG | - | chr2_1:27434729-27434748 | None:intergenic | 40.0% | |
| GGAAAATCGAATTCCTTGAG+AGG | - | chr2_1:27434872-27434891 | None:intergenic | 40.0% | |
| ! | TCAAGGAATTCGATTTTCCC+CGG | + | chr2_1:27434873-27434892 | Msa0203520:intron | 40.0% |
| TACACTGCTATCAAGCCTTT+GGG | + | chr2_1:27435055-27435074 | Msa0203520:CDS | 40.0% | |
| AAGTGTCTTTCCTTCTCCAA+CGG | - | chr2_1:27435185-27435204 | None:intergenic | 40.0% | |
| TTGGAGAAGGAAAGACACTT+GGG | + | chr2_1:27435185-27435204 | Msa0203520:CDS | 40.0% | |
| !!! | TGTGTTTTGTTTGTACAGCC+AGG | + | chr2_1:27435329-27435348 | Msa0203520:intron | 40.0% |
| TTCAAAGTATGCTGGTACTG+AGG | + | chr2_1:27435367-27435386 | Msa0203520:CDS | 40.0% | |
| CTGAAGGATGATGACATTGT+TGG | + | chr2_1:27435419-27435438 | Msa0203520:CDS | 40.0% | |
| !! | TGGCCTCTTATGTTTTGTTG+AGG | + | chr2_1:27435863-27435882 | Msa0203520:intron | 40.0% |
| TTTAGATGATAGCCACTGAC+TGG | + | chr2_1:27435898-27435917 | Msa0203520:intron | 40.0% | |
| GCATGTATTAAACCAGTCAG+TGG | - | chr2_1:27435913-27435932 | None:intergenic | 40.0% | |
| AAGGCGGAAGAAAAAACTTC+AGG | + | chr2_1:27435944-27435963 | Msa0203520:CDS | 40.0% | |
| ACCAAGGAGAAACCTTCATT+TGG | + | chr2_1:27435989-27436008 | Msa0203520:CDS | 40.0% | |
| TCCAAATGAAGGTTTCTCCT+TGG | - | chr2_1:27435993-27436012 | None:intergenic | 40.0% | |
| ! | TCAAACAAAGAAGGTACAGC+AGG | - | chr2_1:27436028-27436047 | None:intergenic | 40.0% |
| TAAACGTGCCGAACATATTC+TGG | - | chr2_1:27436212-27436231 | None:intergenic | 40.0% | |
| TAATACTTGGATGTCACAGG+TGG | + | chr2_1:27436306-27436325 | Msa0203520:intron | 40.0% | |
| AAACCTTTGACTGTTACTCC+TGG | + | chr2_1:27436370-27436389 | Msa0203520:CDS | 40.0% | |
| AACCTTTGACTGTTACTCCT+GGG | + | chr2_1:27436371-27436390 | Msa0203520:CDS | 40.0% | |
| TTTGCCCTTGAAGTCATTAC+CGG | - | chr2_1:27436422-27436441 | None:intergenic | 40.0% | |
| AATGACTTCAAGGGCAAAGA+TGG | + | chr2_1:27436424-27436443 | Msa0203520:CDS | 40.0% | |
| CTCAAATATTGCTCATCTGG+TGG | - | chr2_1:27436675-27436694 | None:intergenic | 40.0% | |
| CAGCTCCAGGTATAATTGAA+AGG | + | chr2_1:27436821-27436840 | Msa0203520:three_prime_UTR | 40.0% | |
| !! | TGAAAGGTATCTATCTTGGG+AGG | + | chr2_1:27436837-27436856 | Msa0203520:three_prime_UTR | 40.0% |
| CAGCATCGTCAATTTCAACG+AGG | + | chr2_1:27433714-27433733 | Msa0203520:CDS | 45.0% | |
| AGGAGCTTTGCATCCTTTGA+AGG | + | chr2_1:27433734-27433753 | Msa0203520:CDS | 45.0% | |
| TGATGGTCGAAGTCCTTCAA+AGG | - | chr2_1:27433750-27433769 | None:intergenic | 45.0% | |
| TCTCCTCGACATGTTAGGAT+TGG | + | chr2_1:27433785-27433804 | Msa0203520:CDS | 45.0% | |
| TTGTTTCACTCCGTTGGAGA+TGG | - | chr2_1:27434257-27434276 | None:intergenic | 45.0% | |
| GACATCTGGTCTATGAAGCA+CGG | - | chr2_1:27434747-27434766 | None:intergenic | 45.0% | |
| GCGATCTTTGTGTAGCAGTT+TGG | - | chr2_1:27434790-27434809 | None:intergenic | 45.0% | |
| !! | ATTTTCCCCGGTGCCAATTT+CGG | + | chr2_1:27434885-27434904 | Msa0203520:intron | 45.0% |
| ! | TTGATAGCAGTGTACTGCAC+AGG | - | chr2_1:27435049-27435068 | None:intergenic | 45.0% |
| GTACACTGCTATCAAGCCTT+TGG | + | chr2_1:27435054-27435073 | Msa0203520:intron | 45.0% | |
| TATCAAGCCTTTGGGTGACA+GGG | + | chr2_1:27435063-27435082 | Msa0203520:CDS | 45.0% | |
| ATAAGTACCCTGTCACCCAA+AGG | - | chr2_1:27435073-27435092 | None:intergenic | 45.0% | |
| CAGAAGAGAAGACTCAGAGT+GGG | + | chr2_1:27435107-27435126 | Msa0203520:CDS | 45.0% | |
| !! | GGCTTTGTTTGAGCACTTGA+TGG | - | chr2_1:27435142-27435161 | None:intergenic | 45.0% |
| AGTGCTCAAACAAAGCCTCA+AGG | + | chr2_1:27435145-27435164 | Msa0203520:CDS | 45.0% | |
| GTTGGAGAAGGAAAGACACT+TGG | + | chr2_1:27435184-27435203 | Msa0203520:CDS | 45.0% | |
| GAATAGACAACTTGTGCACC+TGG | - | chr2_1:27435350-27435369 | None:intergenic | 45.0% | |
| ! | AAAGTATGCTGGTACTGAGG+TGG | + | chr2_1:27435370-27435389 | Msa0203520:CDS | 45.0% |
| CATGCTGCAGATTGAAAAGG+CGG | + | chr2_1:27435928-27435947 | Msa0203520:intron | 45.0% | |
| GCGGAAGAAAAAACTTCAGG+CGG | + | chr2_1:27435947-27435966 | Msa0203520:CDS | 45.0% | |
| ! | AGGCGGTTTGTTTCTTACAG+AGG | + | chr2_1:27435964-27435983 | Msa0203520:CDS | 45.0% |
| GTTTCTTACAGAGGCAACCA+AGG | + | chr2_1:27435973-27435992 | Msa0203520:CDS | 45.0% | |
| TTCCCAGGAGTAACAGTCAA+AGG | - | chr2_1:27436376-27436395 | None:intergenic | 45.0% | |
| GTTCTGTACTCCAAATACGC+CGG | + | chr2_1:27436400-27436419 | Msa0203520:CDS | 45.0% | |
| GAAGTCATTACCGGCGTATT+TGG | - | chr2_1:27436413-27436432 | None:intergenic | 45.0% | |
| ATACGCCGGTAATGACTTCA+AGG | + | chr2_1:27436414-27436433 | Msa0203520:CDS | 45.0% | |
| TACGCCGGTAATGACTTCAA+GGG | + | chr2_1:27436415-27436434 | Msa0203520:CDS | 45.0% | |
| CATGACATCTGAACTCCTCA+AGG | - | chr2_1:27436464-27436483 | None:intergenic | 45.0% | |
| CTTGAGGAGTTCAGATGTCA+TGG | + | chr2_1:27436462-27436481 | Msa0203520:CDS | 45.0% | |
| TGTCATGGCTGTACTCTCTT+AGG | + | chr2_1:27436477-27436496 | Msa0203520:CDS | 45.0% | |
| AGTTCCCGTTAGGAATCACT+TGG | - | chr2_1:27436551-27436570 | None:intergenic | 45.0% | |
| AAGTGATTCCTAACGGGAAC+TGG | + | chr2_1:27436550-27436569 | Msa0203520:three_prime_UTR | 45.0% | |
| AGTGATTCCTAACGGGAACT+GGG | + | chr2_1:27436551-27436570 | Msa0203520:three_prime_UTR | 45.0% | |
| TTGAAAACCCAGTTCCCGTT+AGG | - | chr2_1:27436561-27436580 | None:intergenic | 45.0% | |
| !! | GAACTGGGTTTTCAAGCATC+TGG | + | chr2_1:27436566-27436585 | Msa0203520:three_prime_UTR | 45.0% |
| ! | GGATTGGTAATCCTGCTCGT+AGG | + | chr2_1:27433801-27433820 | Msa0203520:CDS | 50.0% |
| TGTCTGTGCTTCATAGCCTC+TGG | - | chr2_1:27434589-27434608 | None:intergenic | 50.0% | |
| GCACAGACACTACTCGGATT+AGG | + | chr2_1:27434600-27434619 | Msa0203520:intron | 50.0% | |
| ! | TACTCGGATTAGGCGTGTCT+CGG | + | chr2_1:27434610-27434629 | Msa0203520:intron | 50.0% |
| !! | GTTAACCACTTAGGTTGGCC+TGG | + | chr2_1:27434816-27434835 | Msa0203520:intron | 50.0% |
| ! | CTTGAGAGGAGCATACTCCA+AGG | - | chr2_1:27434858-27434877 | None:intergenic | 50.0% |
| CTTGGAGTATGCTCCTCTCA+AGG | + | chr2_1:27434856-27434875 | Msa0203520:intron | 50.0% | |
| CTCAACTAGCCCACCGAAAT+TGG | - | chr2_1:27434901-27434920 | None:intergenic | 50.0% | |
| CTATCAAGCCTTTGGGTGAC+AGG | + | chr2_1:27435062-27435081 | Msa0203520:CDS | 50.0% | |
| GCAGAAGAGAAGACTCAGAG+TGG | + | chr2_1:27435106-27435125 | Msa0203520:CDS | 50.0% | |
| GCTCAAACAAAGCCTCAAGG+AGG | + | chr2_1:27435148-27435167 | Msa0203520:CDS | 50.0% | |
| AACAAAGCCTCAAGGAGGTG+AGG | + | chr2_1:27435153-27435172 | Msa0203520:CDS | 50.0% | |
| ! | GGTACTGAGGTGGACTTCAA+TGG | + | chr2_1:27435380-27435399 | Msa0203520:CDS | 50.0% |
| ! | TGTTGGATCCAAGTTGGCGA+AGG | + | chr2_1:27435535-27435554 | Msa0203520:intron | 50.0% |
| ! | GTTGGATCCAAGTTGGCGAA+GGG | + | chr2_1:27435536-27435555 | Msa0203520:intron | 50.0% |
| ! | CGGTTGATATTGCACACGCA+TGG | + | chr2_1:27435643-27435662 | Msa0203520:intron | 50.0% |
| ATGTCACAGGTGGTAGCAGT+TGG | + | chr2_1:27436316-27436335 | Msa0203520:intron | 50.0% | |
| GAGTACAGAACTGTGTTCCC+AGG | - | chr2_1:27436391-27436410 | None:intergenic | 50.0% | |
| !! | TCATGTGGTTTTGCAGCTCC+AGG | + | chr2_1:27436808-27436827 | Msa0203520:three_prime_UTR | 50.0% |
| TCCTGCTCGTAGGTCCTTCA+AGG | + | chr2_1:27433811-27433830 | Msa0203520:CDS | 55.0% | |
| AACCTTGGGGGCAACAACAG+TGG | - | chr2_1:27433855-27433874 | None:intergenic | 55.0% | |
| TTGAGCGTGGGTTCGCTGAA+TGG | + | chr2_1:27434281-27434300 | Msa0203520:intron | 55.0% | |
| TGAGCGTGGGTTCGCTGAAT+GGG | + | chr2_1:27434282-27434301 | Msa0203520:intron | 55.0% | |
| !! | AACCACTTAGGTTGGCCTGG+TGG | + | chr2_1:27434819-27434838 | Msa0203520:intron | 55.0% |
| !! | TTAGGTTGGCCTGGTGGTGT+TGG | + | chr2_1:27434825-27434844 | Msa0203520:intron | 55.0% |
| TAGCCCACCGAAATTGGCAC+CGG | - | chr2_1:27434895-27434914 | None:intergenic | 55.0% | |
| AAAGCCTCAAGGAGGTGAGG+TGG | + | chr2_1:27435156-27435175 | Msa0203520:CDS | 55.0% | |
| GCCTTGAAGGACCTACGAGC+AGG | - | chr2_1:27433815-27433834 | None:intergenic | 60.0% | |
| CTTGGGGGCAACAACAGTGG+CGG | - | chr2_1:27433852-27433871 | None:intergenic | 60.0% | |
| GAGCGTGGGTTCGCTGAATG+GGG | + | chr2_1:27434283-27434302 | Msa0203520:intron | 60.0% | |
| CACCACCAGGCCAACCTAAG+TGG | - | chr2_1:27434824-27434843 | None:intergenic | 60.0% | |
| !! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr2_1:27434830-27434849 | Msa0203520:intron | 60.0% |
| !! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr2_1:27434831-27434850 | Msa0203520:intron | 60.0% |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | + | chr2_1:27434838-27434857 | Msa0203520:intron | 60.0% |
| ! | TTCCCCGGTGCCAATTTCGG+TGG | + | chr2_1:27434888-27434907 | Msa0203520:intron | 60.0% |
| ! | TCCCCGGTGCCAATTTCGGT+GGG | + | chr2_1:27434889-27434908 | Msa0203520:intron | 60.0% |
| AGCCCACCGAAATTGGCACC+GGG | - | chr2_1:27434894-27434913 | None:intergenic | 60.0% | |
| GCAACCACCTCACCTCCTTG+AGG | - | chr2_1:27435163-27435182 | None:intergenic | 60.0% | |
| GAGGTGGTTGCCGTTGGAGA+AGG | + | chr2_1:27435172-27435191 | Msa0203520:CDS | 60.0% | |
| ! | GGATCCAAGTTGGCGAAGGG+CGG | + | chr2_1:27435539-27435558 | Msa0203520:intron | 60.0% |
| CAGGTGGTAGCAGTTGGTCC+CGG | + | chr2_1:27436322-27436341 | Msa0203520:intron | 60.0% | |
| AGGTGGTAGCAGTTGGTCCC+GGG | + | chr2_1:27436323-27436342 | Msa0203520:intron | 60.0% | |
| CCTTCCTCATCCACAAGCCC+GGG | - | chr2_1:27436343-27436362 | None:intergenic | 60.0% | |
| GCCTTCCTCATCCACAAGCC+CGG | - | chr2_1:27436344-27436363 | None:intergenic | 60.0% | |
| CGCCACTGTTGTTGCCCCCA+AGG | + | chr2_1:27433850-27433869 | Msa0203520:CDS | 65.0% | |
| GGTCCCAAGCCAACACCACC+AGG | - | chr2_1:27434837-27434856 | None:intergenic | 65.0% | |
| GCCCACCGAAATTGGCACCG+GGG | - | chr2_1:27434893-27434912 | None:intergenic | 65.0% | |
| GGAGGTGAGGTGGTTGCCGT+TGG | + | chr2_1:27435166-27435185 | Msa0203520:CDS | 65.0% | |
| ! | TCCAAGTTGGCGAAGGGCGG+TGG | + | chr2_1:27435542-27435561 | Msa0203520:intron | 65.0% |
| ACCACCGCCCTTCGCCAACT+TGG | - | chr2_1:27435546-27435565 | None:intergenic | 65.0% | |
| AGCAGTTGGTCCCGGGCTTG+TGG | + | chr2_1:27436330-27436349 | Msa0203520:CDS | 65.0% | |
| TGGTCCCGGGCTTGTGGATG+AGG | + | chr2_1:27436336-27436355 | Msa0203520:CDS | 65.0% | |
| CCCGGGCTTGTGGATGAGGA+AGG | + | chr2_1:27436340-27436359 | Msa0203520:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 27433366 | 27436905 | 27433366 | ID=Msa0203520;Name=Msa0203520 |
| chr2_1 | mRNA | 27433366 | 27436905 | 27433366 | ID=Msa0203520-mRNA-1;Parent=Msa0203520;Name=Msa0203520-mRNA-1;_AED=0.03;_eAED=0.03;_QI=229|1|1|1|0.66|0.42|7|378|254 |
| chr2_1 | exon | 27433366 | 27433583 | 27433366 | ID=Msa0203520-mRNA-1:exon:10120;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27433684 | 27433871 | 27433684 | ID=Msa0203520-mRNA-1:exon:10121;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27435055 | 27435234 | 27435055 | ID=Msa0203520-mRNA-1:exon:10122;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27435347 | 27435502 | 27435347 | ID=Msa0203520-mRNA-1:exon:10123;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27435938 | 27436015 | 27435938 | ID=Msa0203520-mRNA-1:exon:10124;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27436325 | 27436750 | 27436325 | ID=Msa0203520-mRNA-1:exon:10125;Parent=Msa0203520-mRNA-1 |
| chr2_1 | exon | 27436780 | 27436905 | 27436780 | ID=Msa0203520-mRNA-1:exon:10126;Parent=Msa0203520-mRNA-1 |
| chr2_1 | five_prime_UTR | 27433366 | 27433583 | 27433366 | ID=Msa0203520-mRNA-1:five_prime_utr;Parent=Msa0203520-mRNA-1 |
| chr2_1 | five_prime_UTR | 27433684 | 27433694 | 27433684 | ID=Msa0203520-mRNA-1:five_prime_utr;Parent=Msa0203520-mRNA-1 |
| chr2_1 | CDS | 27433695 | 27433871 | 27433695 | ID=Msa0203520-mRNA-1:cds;Parent=Msa0203520-mRNA-1 |
| chr2_1 | CDS | 27435055 | 27435234 | 27435055 | ID=Msa0203520-mRNA-1:cds;Parent=Msa0203520-mRNA-1 |
| chr2_1 | CDS | 27435347 | 27435502 | 27435347 | ID=Msa0203520-mRNA-1:cds;Parent=Msa0203520-mRNA-1 |
| chr2_1 | CDS | 27435938 | 27436015 | 27435938 | ID=Msa0203520-mRNA-1:cds;Parent=Msa0203520-mRNA-1 |
| chr2_1 | CDS | 27436325 | 27436498 | 27436325 | ID=Msa0203520-mRNA-1:cds;Parent=Msa0203520-mRNA-1 |
| chr2_1 | three_prime_UTR | 27436499 | 27436750 | 27436499 | ID=Msa0203520-mRNA-1:three_prime_utr;Parent=Msa0203520-mRNA-1 |
| chr2_1 | three_prime_UTR | 27436780 | 27436905 | 27436780 | ID=Msa0203520-mRNA-1:three_prime_utr;Parent=Msa0203520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
