AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0761790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761790 MtrunA17_Chr5g0412111 95.584 317 14 0 1 317 150 466 0.0 634
Msa0761790 MtrunA17_Chr5g0412131 79.062 320 63 2 1 317 156 474 3.13e-180 506
Msa0761790 MtrunA17_Chr5g0412101 77.188 320 70 1 1 317 156 475 2.46e-178 501
Msa0761790 MtrunA17_Chr7g0217881 42.014 288 164 3 27 312 175 461 1.06e-78 247
Msa0761790 MtrunA17_Chr6g0454121 40.063 317 182 4 1 310 161 476 8.53e-77 243
Msa0761790 MtrunA17_Chr6g0454401 40.404 297 174 3 18 312 185 480 5.26e-76 241
Msa0761790 MtrunA17_Chr5g0426401 42.951 305 165 7 18 316 13 314 5.38e-76 235
Msa0761790 MtrunA17_Chr6g0454141 38.558 319 188 4 1 312 162 479 7.96e-76 240
Msa0761790 MtrunA17_Chr6g0454261 37.461 323 184 5 2 312 163 479 4.96e-75 238
Msa0761790 MtrunA17_Chr6g0454291 39.394 297 177 3 18 312 181 476 5.32e-75 238
Msa0761790 MtrunA17_Chr6g0454201 38.255 298 179 4 18 312 185 480 7.25e-74 235
Msa0761790 MtrunA17_Chr5g0426431 42.568 296 165 5 18 310 182 475 2.12e-73 234
Msa0761790 MtrunA17_Chr6g0454151 39.062 320 175 6 3 310 164 475 4.67e-73 233
Msa0761790 MtrunA17_Chr6g0453961 39.655 290 172 3 25 312 201 489 5.70e-73 233
Msa0761790 MtrunA17_Chr6g0454191 40.067 297 175 3 18 312 185 480 8.23e-73 232
Msa0761790 MtrunA17_Chr3g0092641 40.566 318 179 6 3 312 162 477 1.06e-72 232
Msa0761790 MtrunA17_Chr6g0454361 38.095 294 179 3 18 309 185 477 1.85e-72 231
Msa0761790 MtrunA17_Chr6g0454271 38.542 288 165 3 32 312 4 286 1.99e-72 225
Msa0761790 MtrunA17_Chr6g0454131 39.185 319 182 5 1 310 161 476 4.65e-72 230
Msa0761790 MtrunA17_Chr5g0423981 38.966 290 174 3 25 312 156 444 5.10e-72 229
Msa0761790 MtrunA17_Chr8g0359821 39.796 294 172 5 22 312 186 477 7.74e-72 230
Msa0761790 MtrunA17_Chr6g0452771 37.812 320 189 5 1 312 162 479 1.58e-71 229
Msa0761790 MtrunA17_Chr6g0454181 38.721 297 179 3 18 312 184 479 2.35e-71 228
Msa0761790 MtrunA17_Chr6g0454301 40.893 291 168 4 25 312 441 730 6.31e-71 233
Msa0761790 MtrunA17_Chr6g0454301 42.982 228 124 3 87 310 2 227 9.53e-55 189
Msa0761790 MtrunA17_Chr6g0453951 39.000 300 174 5 18 312 231 526 7.76e-71 228
Msa0761790 MtrunA17_Chr2g0278711 42.053 302 166 7 18 312 177 476 3.52e-70 225
Msa0761790 MtrunA17_Chr6g0454331 37.710 297 182 3 18 312 183 478 6.97e-70 225
Msa0761790 MtrunA17_Chr6g0454211 38.721 297 179 3 18 312 471 766 3.26e-69 229
Msa0761790 MtrunA17_Chr6g0454211 35.745 235 115 4 2 231 33 236 6.87e-42 154
Msa0761790 MtrunA17_Chr8g0336331 39.175 291 173 4 25 312 187 476 4.71e-69 223
Msa0761790 MtrunA17_Chr6g0454341 38.754 289 173 4 25 310 188 475 1.23e-68 221
Msa0761790 MtrunA17_Chr3g0078841 38.062 289 175 4 25 310 188 475 2.04e-67 218
Msa0761790 MtrunA17_Chr3g0112771 37.500 320 182 7 1 315 148 454 1.10e-66 216
Msa0761790 MtrunA17_Chr4g0050341 39.394 297 162 6 25 309 197 487 1.70e-66 216
Msa0761790 MtrunA17_Chr6g0454351 37.248 298 165 5 18 312 186 464 1.87e-65 213
Msa0761790 MtrunA17_Chr3g0118691 36.760 321 190 6 3 312 164 482 9.61e-64 209
Msa0761790 MtrunA17_Chr6g0454321 37.676 284 163 4 25 295 188 470 1.38e-63 212
Msa0761790 MtrunA17_Chr3g0118661 37.107 318 188 6 3 310 162 477 1.26e-61 203
Msa0761790 MtrunA17_Chr3g0118701 35.644 303 185 6 15 310 181 480 1.89e-60 200
Msa0761790 MtrunA17_Chr3g0112761 37.888 322 181 8 1 315 143 452 3.85e-60 199
Msa0761790 MtrunA17_Chr3g0118771 35.855 304 185 6 14 310 186 486 5.99e-60 199
Msa0761790 MtrunA17_Chr4g0032331 38.413 315 167 10 10 316 158 453 6.29e-60 198
Msa0761790 MtrunA17_Chr3g0118721 36.111 288 175 5 32 312 4 289 7.16e-60 193
Msa0761790 MtrunA17_Chr6g0454221 43.172 227 126 3 87 310 2 228 9.40e-60 193
Msa0761790 MtrunA17_Chr3g0118671 34.000 300 192 4 15 309 172 470 1.82e-58 195
Msa0761790 MtrunA17_Chr3g0118711 35.667 300 169 7 27 312 191 480 3.73e-57 191
Msa0761790 MtrunA17_Chr6g0454171 36.842 266 146 4 51 310 58 307 2.83e-56 184
Msa0761790 MtrunA17_Chr8g0380531 36.027 297 179 8 24 313 166 458 1.18e-51 176
Msa0761790 MtrunA17_Chr6g0454251 40.741 216 126 2 18 232 181 395 5.02e-50 171
Msa0761790 MtrunA17_Chr8g0355011 33.333 297 153 6 18 312 108 361 2.29e-49 168
Msa0761790 MtrunA17_Chr7g0249981 33.793 290 179 6 32 315 184 466 4.56e-49 170
Msa0761790 MtrunA17_Chr6g0464871 36.039 308 178 9 9 309 168 463 1.03e-48 169
Msa0761790 MtrunA17_Chr7g0250001 32.740 281 179 5 35 309 168 444 2.01e-47 165
Msa0761790 MtrunA17_Chr8g0366391 35.275 309 184 8 22 316 175 481 2.96e-47 166
Msa0761790 MtrunA17_Chr6g0454371 44.118 170 93 2 145 312 1 170 1.16e-46 155
Msa0761790 MtrunA17_Chr3g0118751 32.226 301 171 6 14 310 171 442 3.34e-46 162
Msa0761790 MtrunA17_Chr3g0121991 35.256 312 182 8 24 316 239 549 3.57e-46 164
Msa0761790 MtrunA17_Chr1g0207981 32.268 313 200 7 6 312 166 472 8.65e-46 161
Msa0761790 MtrunA17_Chr8g0377921 32.680 306 185 8 25 312 161 463 1.23e-45 160
Msa0761790 MtrunA17_Chr6g0464921 34.494 316 173 11 9 309 156 452 1.68e-45 160
Msa0761790 MtrunA17_Chr7g0265041 34.386 285 152 8 56 312 211 488 1.09e-44 159
Msa0761790 MtrunA17_Chr7g0218811 31.661 319 184 8 1 311 156 448 1.15e-44 158
Msa0761790 MtrunA17_Chr7g0249961 35.865 237 142 5 87 317 32 264 1.34e-44 153
Msa0761790 MtrunA17_Chr7g0249931 31.379 290 186 5 32 315 201 483 1.61e-44 158
Msa0761790 MtrunA17_Chr6g0464881 33.446 296 176 10 25 309 166 451 1.94e-44 157
Msa0761790 MtrunA17_Chr7g0218831 31.975 319 183 7 1 311 146 438 2.45e-44 157
Msa0761790 MtrunA17_Chr7g0265151 36.237 287 154 9 52 312 200 483 2.64e-44 157
Msa0761790 MtrunA17_Chr1g0159551 36.466 266 143 5 65 312 202 459 3.34e-44 157
Msa0761790 MtrunA17_Chr5g0414331 33.657 309 179 12 18 312 157 453 1.57e-43 155
Msa0761790 MtrunA17_Chr1g0173121 37.594 266 139 6 65 312 206 462 1.91e-43 155
Msa0761790 MtrunA17_Chr7g0218821 33.103 290 161 7 36 313 183 451 2.41e-43 154
Msa0761790 MtrunA17_Chr6g0464841 33.546 313 179 9 9 309 156 451 3.43e-43 154
Msa0761790 MtrunA17_Chr4g0044511 32.166 314 185 11 21 314 201 506 4.95e-43 154
Msa0761790 MtrunA17_Chr6g0462531 32.468 308 176 8 20 310 170 462 6.61e-43 153
Msa0761790 MtrunA17_Chr8g0335141 36.604 265 135 8 65 308 212 464 1.36e-42 152
Msa0761790 MtrunA17_Chr3g0122001 34.295 312 177 7 24 312 646 952 2.12e-42 156
Msa0761790 MtrunA17_Chr3g0122001 32.692 312 191 6 24 316 166 477 2.85e-40 150
Msa0761790 MtrunA17_Chr5g0414321 32.390 318 183 13 9 312 152 451 3.10e-42 151
Msa0761790 MtrunA17_Chr4g0053321 34.646 254 153 6 67 309 225 476 4.41e-42 152
Msa0761790 MtrunA17_Chr8g0382021 37.175 269 139 10 65 312 229 488 4.67e-42 151
Msa0761790 MtrunA17_Chr7g0218841 33.216 283 167 6 36 311 172 439 8.45e-42 150
Msa0761790 MtrunA17_Chr8g0373301 32.609 322 167 13 16 308 162 462 9.84e-42 150
Msa0761790 MtrunA17_Chr8g0377941 34.868 304 165 10 25 312 175 461 1.53e-41 150
Msa0761790 MtrunA17_Chr1g0179901 32.416 327 186 12 17 315 177 496 1.58e-41 150
Msa0761790 MtrunA17_Chr7g0275681 34.050 279 156 7 56 312 208 480 1.83e-41 150
Msa0761790 MtrunA17_Chr4g0044501 32.808 317 188 10 16 315 170 478 1.99e-41 150
Msa0761790 MtrunA17_Chr6g0464861 32.595 316 178 11 9 309 155 450 2.00e-41 149
Msa0761790 MtrunA17_Chr8g0336261 46.324 136 72 1 145 279 1 136 2.55e-41 140
Msa0761790 MtrunA17_Chr8g0365811 31.379 290 177 6 40 314 677 959 3.72e-41 152
Msa0761790 MtrunA17_Chr8g0365811 33.051 236 135 7 67 285 218 447 1.26e-34 133
Msa0761790 MtrunA17_Chr3g0098111 33.846 260 156 5 67 314 216 471 5.65e-41 148
Msa0761790 MtrunA17_Chr8g0334861 32.593 270 145 5 65 309 203 460 6.14e-41 148
Msa0761790 MtrunA17_Chr8g0347281 33.766 308 164 11 24 308 178 468 8.31e-41 148
Msa0761790 MtrunA17_Chr7g0243631 31.529 314 189 9 25 315 179 489 9.20e-41 148
Msa0761790 MtrunA17_Chr1g0207951 34.646 254 151 5 67 313 326 571 2.10e-40 150
Msa0761790 MtrunA17_Chr1g0207951 33.088 272 162 7 49 312 849 1108 2.10e-39 147
Msa0761790 MtrunA17_Chr7g0243771 34.317 271 153 7 66 315 212 478 2.14e-40 147
Msa0761790 MtrunA17_Chr6g0454231 33.074 257 129 5 63 315 4 221 2.30e-40 147
Msa0761790 MtrunA17_Chr4g0060511 33.333 282 159 8 59 315 213 490 2.39e-40 147
Msa0761790 MtrunA17_Chr7g0243871 32.967 273 154 6 63 315 212 475 3.18e-40 146
Msa0761790 MtrunA17_Chr6g0462571 31.077 325 188 11 1 308 152 457 3.76e-40 146
Msa0761790 MtrunA17_Chr5g0401721 31.438 299 189 8 22 309 174 467 4.34e-40 146
Msa0761790 MtrunA17_Chr5g0419771 33.217 286 164 8 56 317 235 517 4.64e-40 147
Msa0761790 MtrunA17_Chr4g0053501 31.270 307 191 10 16 309 162 461 4.88e-40 146
Msa0761790 MtrunA17_Chr7g0265101 33.813 278 161 7 57 312 210 486 5.96e-40 146
Msa0761790 MtrunA17_Chr8g0336691 35.075 268 141 6 64 308 1118 1375 6.51e-40 149
Msa0761790 MtrunA17_Chr8g0336691 34.328 268 143 8 64 308 212 469 2.03e-39 147
Msa0761790 MtrunA17_Chr8g0336691 33.992 253 136 7 64 308 679 908 2.43e-36 139
Msa0761790 MtrunA17_Chr8g0335161 33.333 309 166 11 24 308 170 462 6.85e-40 145
Msa0761790 MtrunA17_Chr5g0419761 32.042 284 160 7 56 312 208 485 1.47e-39 145
Msa0761790 MtrunA17_Chr8g0336651 32.099 324 178 9 15 308 928 1239 1.52e-39 148
Msa0761790 MtrunA17_Chr8g0336651 32.852 277 144 9 41 308 527 770 4.12e-37 140
Msa0761790 MtrunA17_Chr8g0336651 35.821 268 135 12 65 308 206 460 1.15e-35 137
Msa0761790 MtrunA17_Chr8g0334851 34.237 295 149 8 49 316 197 473 1.61e-39 144
Msa0761790 MtrunA17_Chr6g0486251 32.903 310 165 12 24 308 169 460 1.84e-39 144
Msa0761790 MtrunA17_Chr6g0486201 32.903 310 165 12 24 308 169 460 1.84e-39 144
Msa0761790 MtrunA17_Chr7g0243801 33.948 271 154 7 66 315 213 479 1.90e-39 144
Msa0761790 MtrunA17_Chr4g0014061 33.808 281 162 7 57 315 197 475 1.96e-39 144
Msa0761790 MtrunA17_Chr1g0207971 32.283 254 158 5 67 313 208 454 2.02e-39 144
Msa0761790 MtrunA17_Chr7g0243931 32.028 281 168 7 57 315 214 493 4.62e-39 144
Msa0761790 MtrunA17_Chr7g0235051 33.962 265 153 6 66 309 187 450 5.69e-39 143
Msa0761790 MtrunA17_Chr4g0066151 32.180 289 167 7 52 313 194 480 6.35e-39 143
Msa0761790 MtrunA17_Chr7g0265051 35.252 278 156 8 57 312 209 484 6.85e-39 143
Msa0761790 MtrunA17_Chr8g0347271 34.701 268 138 8 64 308 216 469 8.26e-39 142
Msa0761790 MtrunA17_Chr5g0429711 32.381 315 177 10 15 312 166 461 8.85e-39 142
Msa0761790 MtrunA17_Chr1g0207861 33.846 260 156 5 67 314 215 470 1.51e-38 142
Msa0761790 MtrunA17_Chr7g0243681 33.088 272 154 7 66 315 217 482 1.55e-38 142
Msa0761790 MtrunA17_Chr4g0044521 31.068 309 182 10 25 310 164 464 2.15e-38 141
Msa0761790 MtrunA17_Chr1g0207931 32.819 259 158 5 67 313 244 498 2.17e-38 142
Msa0761790 MtrunA17_Chr1g0161351 33.333 261 158 5 67 315 244 500 2.20e-38 142
Msa0761790 MtrunA17_Chr6g0462541 31.068 309 174 11 20 308 170 459 2.28e-38 141
Msa0761790 MtrunA17_Chr5g0431441 31.250 320 196 9 3 312 160 465 2.56e-38 141
Msa0761790 MtrunA17_Chr4g0042891 34.082 267 141 8 65 310 211 463 2.84e-38 141
Msa0761790 MtrunA17_Chr7g0232401 31.250 272 160 4 49 301 193 456 3.14e-38 141
Msa0761790 MtrunA17_Chr8g0339601 33.712 264 137 10 64 300 66 318 3.48e-38 138
Msa0761790 MtrunA17_Chr7g0232411 31.786 280 151 8 55 308 196 461 4.54e-38 140
Msa0761790 MtrunA17_Chr8g0339451 33.829 269 140 10 64 305 199 456 9.65e-38 139
Msa0761790 MtrunA17_Chr7g0265141 32.384 281 159 8 56 310 208 483 1.43e-37 139
Msa0761790 MtrunA17_Chr7g0243781 30.515 272 159 6 66 315 215 478 1.57e-37 139
Msa0761790 MtrunA17_Chr7g0243951 31.429 280 170 7 57 315 208 486 1.71e-37 139
Msa0761790 MtrunA17_Chr8g0339461 33.439 314 168 13 16 301 160 460 2.05e-37 139
Msa0761790 MtrunA17_Chr1g0207831 31.518 257 158 4 67 313 216 464 2.24e-37 139
Msa0761790 MtrunA17_Chr4g0042931 33.333 270 147 7 63 310 203 461 2.36e-37 139
Msa0761790 MtrunA17_Chr6g0459311 31.596 307 173 10 24 308 176 467 2.76e-37 138
Msa0761790 MtrunA17_Chr4g0066221 31.673 281 163 8 62 315 205 483 2.85e-37 139
Msa0761790 MtrunA17_Chr7g0275511 35.793 271 137 11 63 308 213 471 2.85e-37 139
Msa0761790 MtrunA17_Chr8g0336741 34.944 269 136 11 65 308 213 467 2.86e-37 138
Msa0761790 MtrunA17_Chr4g0011051 33.569 283 161 9 57 315 211 490 3.25e-37 139
Msa0761790 MtrunA17_Chr3g0079731 32.979 282 143 8 63 310 209 478 4.72e-37 138
Msa0761790 MtrunA17_Chr4g0072761 32.292 288 168 8 29 314 192 454 4.97e-37 137
Msa0761790 MtrunA17_Chr4g0066281 32.362 309 171 10 35 313 167 467 7.82e-37 137
Msa0761790 MtrunA17_Chr7g0218791 33.198 247 143 6 64 305 211 440 8.77e-37 136
Msa0761790 MtrunA17_Chr6g0449931 32.384 281 147 8 64 316 206 471 1.16e-36 137
Msa0761790 MtrunA17_Chr7g0232391 32.331 266 148 7 65 308 206 461 2.19e-36 136
Msa0761790 MtrunA17_Chr5g0442581 30.625 320 174 10 25 312 173 476 2.48e-36 137
Msa0761790 MtrunA17_Chr7g0265111 33.968 315 183 7 25 314 203 517 2.56e-36 137
Msa0761790 MtrunA17_Chr8g0361371 31.746 315 168 12 24 309 171 467 2.74e-36 135
Msa0761790 MtrunA17_Chr5g0401851 31.317 281 170 7 57 315 207 486 2.75e-36 136
Msa0761790 MtrunA17_Chr7g0243711 32.400 250 149 5 85 315 71 319 4.27e-36 132
Msa0761790 MtrunA17_Chr7g0232331 31.636 275 155 8 65 316 206 470 4.30e-36 135
Msa0761790 MtrunA17_Chr8g0339441 38.647 207 103 7 122 305 217 422 5.10e-36 134
Msa0761790 MtrunA17_Chr6g0463891 31.985 272 165 5 63 315 217 487 5.35e-36 135
Msa0761790 MtrunA17_Chr6g0462551 30.744 309 177 9 20 308 169 460 6.91e-36 135
Msa0761790 MtrunA17_Chr1g0153451 33.333 267 142 10 65 308 206 459 7.40e-36 134
Msa0761790 MtrunA17_Chr6g0462521 30.097 309 173 8 20 310 165 448 8.96e-36 134
Msa0761790 MtrunA17_Chr7g0232341 30.719 306 162 10 39 316 187 470 1.24e-35 134
Msa0761790 MtrunA17_Chr8g0336731 30.887 327 182 12 12 309 176 487 1.28e-35 134
Msa0761790 MtrunA17_Chr4g0066261 30.877 285 169 6 57 315 202 484 1.33e-35 134
Msa0761790 MtrunA17_Chr4g0044481 34.177 237 148 6 21 254 166 397 2.28e-35 132
Msa0761790 MtrunA17_Chr6g0463861 31.338 284 160 9 57 310 193 471 2.59e-35 133
Msa0761790 MtrunA17_Chr7g0232311 32.836 268 144 10 65 309 206 460 2.74e-35 133
Msa0761790 MtrunA17_Chr5g0442491 32.143 280 146 8 64 312 208 474 3.32e-35 133
Msa0761790 MtrunA17_Chr8g0339631 33.080 263 139 11 64 301 207 457 3.38e-35 133
Msa0761790 MtrunA17_Chr7g0243851 32.721 272 160 8 66 315 175 445 3.53e-35 132
Msa0761790 MtrunA17_Chr4g0072771 32.283 254 156 6 63 314 228 467 6.00e-35 132
Msa0761790 MtrunA17_Chr8g0355221 29.348 276 169 7 63 315 217 489 6.60e-35 132
Msa0761790 MtrunA17_Chr1g0165701 31.557 244 150 4 89 315 243 486 7.91e-35 132
Msa0761790 MtrunA17_Chr5g0431361 29.904 311 189 7 16 314 162 455 7.93e-35 131
Msa0761790 MtrunA17_Chr5g0440421 32.624 282 156 10 61 315 222 496 9.51e-35 132
Msa0761790 MtrunA17_Chr7g0243861 30.605 281 172 7 57 315 211 490 1.12e-34 132
Msa0761790 MtrunA17_Chr5g0448521 32.492 317 162 14 36 312 163 467 1.96e-34 130
Msa0761790 MtrunA17_Chr5g0442521 32.509 283 145 9 63 312 206 475 2.19e-34 130
Msa0761790 MtrunA17_Chr5g0432731 31.474 251 158 5 16 265 3 240 2.69e-34 127
Msa0761790 MtrunA17_Chr7g0243761 37.313 201 100 5 123 315 275 457 2.86e-34 130
Msa0761790 MtrunA17_Chr5g0429681 32.215 298 179 9 25 309 209 496 3.23e-34 130
Msa0761790 MtrunA17_Chr4g0066131 29.866 298 169 9 51 315 187 477 4.79e-34 130
Msa0761790 MtrunA17_Chr5g0442601 30.530 321 171 12 25 312 574 875 6.72e-34 131
Msa0761790 MtrunA17_Chr5g0442601 35.676 185 85 7 90 252 164 336 8.56e-24 102
Msa0761790 MtrunA17_Chr8g0334831 30.864 324 168 12 24 309 170 475 7.33e-34 129
Msa0761790 MtrunA17_Chr7g0218311 30.508 295 171 9 50 315 197 486 1.65e-33 128
Msa0761790 MtrunA17_Chr4g0066201 31.142 289 160 10 57 315 198 477 1.79e-33 128
Msa0761790 MtrunA17_Chr5g0393591 31.683 202 121 3 119 316 251 439 1.85e-33 127
Msa0761790 MtrunA17_Chr2g0294921 30.375 293 175 7 50 315 343 633 5.14e-33 128
Msa0761790 MtrunA17_Chr1g0153461 33.981 206 117 4 122 308 3 208 6.07e-33 121
Msa0761790 MtrunA17_Chr5g0431401 29.836 305 185 8 22 314 163 450 9.65e-33 125
Msa0761790 MtrunA17_Chr5g0416741 28.881 277 179 4 57 315 210 486 1.05e-32 126
Msa0761790 MtrunA17_Chr2g0307961 31.985 272 164 9 52 312 207 468 1.08e-32 125
Msa0761790 MtrunA17_Chr3g0106231 28.662 314 186 9 16 312 159 451 1.13e-32 126
Msa0761790 MtrunA17_Chr8g0374901 31.597 288 152 11 63 315 204 481 1.21e-32 126
Msa0761790 MtrunA17_Chr2g0302991 30.195 308 182 9 25 310 164 460 1.26e-32 125
Msa0761790 MtrunA17_Chr8g0374941 31.387 274 159 8 63 309 1143 1414 1.27e-32 128
Msa0761790 MtrunA17_Chr8g0374941 30.258 271 145 11 63 295 205 469 3.57e-28 115
Msa0761790 MtrunA17_Chr8g0374941 31.034 261 147 9 63 294 670 926 2.04e-27 112
Msa0761790 MtrunA17_Chr2g0302961 30.303 264 157 7 66 310 208 463 1.51e-32 125
Msa0761790 MtrunA17_Chr7g0243611 35.897 195 118 4 66 254 78 271 1.86e-32 122
Msa0761790 MtrunA17_Chr6g0453981 37.853 177 106 3 18 192 54 228 1.89e-32 120
Msa0761790 MtrunA17_Chr5g0442561 29.063 320 177 11 25 312 171 472 2.65e-32 125
Msa0761790 MtrunA17_Chr5g0403641 30.208 288 152 9 53 305 222 495 2.85e-32 125
Msa0761790 MtrunA17_Chr2g0294931 30.035 283 170 7 57 313 202 482 3.94e-32 124
Msa0761790 MtrunA17_Chr8g0374971 30.282 284 163 8 62 315 205 483 5.01e-32 124
Msa0761790 MtrunA17_Chr5g0442541 29.245 318 181 10 24 312 163 465 5.20e-32 124
Msa0761790 MtrunA17_Chr5g0448551 29.670 273 181 5 1 272 147 409 6.32e-32 124
Msa0761790 MtrunA17_Chr5g0428081 30.000 280 168 6 62 315 205 482 8.41e-32 124
Msa0761790 MtrunA17_Chr4g0066171 30.903 288 162 9 57 315 200 479 1.32e-31 123
Msa0761790 MtrunA17_Chr8g0374931 29.431 299 177 9 50 317 194 489 1.49e-31 123
Msa0761790 MtrunA17_Chr5g0431431 32.271 251 136 7 8 249 99 324 1.68e-31 120
Msa0761790 MtrunA17_Chr6g0463851 29.377 337 179 14 15 313 168 483 2.62e-31 122
Msa0761790 MtrunA17_Chr5g0431421 30.519 308 179 9 22 314 163 450 4.06e-31 121
Msa0761790 MtrunA17_Chr8g0350881 31.250 288 163 9 56 313 199 481 4.81e-31 121
Msa0761790 MtrunA17_Chr8g0369341 30.189 265 159 9 66 316 220 472 1.97e-30 119
Msa0761790 MtrunA17_Chr7g0243911 33.990 203 121 4 116 307 15 215 3.15e-30 114
Msa0761790 MtrunA17_Chr5g0431371 30.357 280 169 6 47 314 185 450 3.27e-30 119
Msa0761790 MtrunA17_Chr5g0420801 30.682 264 158 8 66 316 211 462 4.97e-30 118
Msa0761790 MtrunA17_Chr5g0442511 31.071 280 151 10 64 313 227 494 5.21e-30 119
Msa0761790 MtrunA17_Chr2g0294941 33.028 218 131 6 62 266 105 320 5.49e-30 117
Msa0761790 MtrunA17_Chr3g0106251 28.387 310 188 9 14 312 7 293 1.01e-29 115
Msa0761790 MtrunA17_Chr2g0329111 32.828 198 114 5 62 248 213 402 2.49e-29 117
Msa0761790 MtrunA17_Chr8g0370941 28.523 298 151 10 63 312 205 488 2.81e-29 117
Msa0761790 MtrunA17_Chr5g0410941 29.932 294 171 9 50 313 202 490 2.84e-29 117
Msa0761790 MtrunA17_Chr8g0357361 33.654 208 122 5 58 258 55 253 8.91e-29 111
Msa0761790 MtrunA17_Chr6g0453941 37.870 169 103 2 18 185 106 273 9.80e-29 111
Msa0761790 MtrunA17_Chr5g0416821 28.929 280 163 8 57 315 212 476 3.24e-28 114
Msa0761790 MtrunA17_Chr6g0482061 28.475 295 179 9 25 300 186 467 1.24e-27 112
Msa0761790 MtrunA17_Chr7g0243811 33.333 195 117 5 63 252 187 373 4.12e-27 109
Msa0761790 MtrunA17_Chr7g0232351 36.957 184 88 6 65 231 206 378 1.33e-26 107
Msa0761790 MtrunA17_Chr5g0409591 30.242 248 140 9 66 284 212 455 3.13e-26 108
Msa0761790 MtrunA17_Chr8g0361411 28.958 259 171 6 66 315 202 456 1.22e-25 106
Msa0761790 MtrunA17_Chr7g0241781 34.518 197 116 6 121 313 239 426 1.34e-25 105
Msa0761790 MtrunA17_Chr5g0427571 43.651 126 66 4 125 246 105 229 4.96e-25 102
Msa0761790 MtrunA17_Chr7g0231631 29.961 257 170 5 66 315 9 262 5.56e-25 101
Msa0761790 MtrunA17_Chr6g0454111 34.752 141 91 1 25 165 44 183 6.64e-25 99.0
Msa0761790 MtrunA17_Chr3g0092031 40.476 126 73 2 124 248 5 129 6.90e-25 99.8
Msa0761790 MtrunA17_Chr8g0336321 43.939 132 68 5 120 246 265 395 7.05e-25 104
Msa0761790 MtrunA17_Chr7g0241801 34.054 185 97 5 121 304 239 399 8.92e-25 103
Msa0761790 MtrunA17_Chr8g0337381 39.062 128 73 2 192 315 2 128 3.68e-24 95.5
Msa0761790 MtrunA17_Chr4g0066141 37.107 159 83 4 174 315 196 354 5.14e-24 100
Msa0761790 MtrunA17_Chr8g0367221 37.297 185 100 8 125 298 1058 1237 6.36e-24 102
Msa0761790 MtrunA17_Chr8g0367221 41.085 129 70 3 125 248 271 398 3.41e-23 100
Msa0761790 MtrunA17_Chr8g0367221 40.310 129 71 3 125 248 1548 1675 5.45e-23 99.8
Msa0761790 MtrunA17_Chr8g0336251 39.695 131 75 3 120 246 265 395 7.30e-24 101
Msa0761790 MtrunA17_Chr3g0079711 34.595 185 97 7 149 310 3 186 1.04e-22 93.2
Msa0761790 MtrunA17_Chr2g0278721 33.721 172 105 5 124 288 784 953 1.78e-21 95.1
Msa0761790 MtrunA17_Chr2g0278721 40.800 125 72 2 125 248 274 397 4.04e-20 91.3
Msa0761790 MtrunA17_Chr6g0464091 40.800 125 72 2 125 248 279 402 4.44e-21 93.2
Msa0761790 MtrunA17_Chr1g0207881 32.680 153 96 1 168 313 233 385 9.27e-21 91.7
Msa0761790 MtrunA17_Chr6g0466831 31.250 176 112 5 124 292 271 444 1.25e-20 92.0
Msa0761790 MtrunA17_Chr2g0278741 40.800 125 72 2 125 248 356 479 2.12e-20 91.7
Msa0761790 MtrunA17_Chr6g0466841 38.095 126 76 2 124 248 271 395 2.83e-20 90.9
Msa0761790 MtrunA17_Chr4g0069611 36.508 126 78 2 124 248 268 392 7.43e-20 89.7
Msa0761790 MtrunA17_Chr4g0039881 38.095 126 76 2 124 248 245 369 1.67e-19 88.6
Msa0761790 MtrunA17_Chr2g0302851 37.302 126 77 2 124 248 269 393 3.72e-19 87.8
Msa0761790 MtrunA17_Chr8g0334841 33.537 164 87 5 25 180 1 150 4.45e-18 80.5
Msa0761790 MtrunA17_Chr4g0029131 33.813 139 84 4 125 256 257 394 2.25e-16 79.7
Msa0761790 MtrunA17_Chr4g0040691 27.843 255 157 9 71 310 217 459 5.85e-16 78.2
Msa0761790 MtrunA17_Chr1g0196851 28.249 177 113 6 119 283 292 466 1.16e-14 74.3
Msa0761790 MtrunA17_Chr4g0029151 32.857 140 86 4 125 257 265 403 1.67e-14 73.9
Msa0761790 MtrunA17_Chr4g0040711 28.507 221 138 7 71 283 217 425 2.12e-14 73.6
Msa0761790 MtrunA17_Chr2g0283041 25.373 201 141 3 123 315 256 455 4.28e-14 72.4
Msa0761790 MtrunA17_Chr6g0454391 33.929 112 59 3 208 312 13 116 6.41e-14 67.4
Msa0761790 MtrunA17_Chr7g0243731 43.056 72 41 0 185 256 2 73 8.64e-14 65.9
Msa0761790 MtrunA17_Chr7g0250021 29.032 155 106 3 35 188 176 327 1.78e-12 67.0
Msa0761790 MtrunA17_Chr5g0427561 32.955 88 50 3 230 312 1 84 1.84e-11 59.7
Msa0761790 MtrunA17_Chr5g0442501 30.000 150 85 4 25 169 169 303 2.24e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761790 AT1G22380.1 38.284 303 179 6 16 312 180 480 1.90e-66 216
Msa0761790 AT1G22400.1 36.824 296 181 5 19 309 184 478 6.33e-66 215
Msa0761790 AT3G11340.1 40.000 290 157 6 32 315 169 447 9.41e-66 213
Msa0761790 AT5G05890.1 38.629 321 173 10 1 314 151 454 3.12e-64 209
Msa0761790 AT1G22340.1 36.964 303 184 5 16 312 180 481 3.55e-64 210
Msa0761790 AT1G22360.1 36.275 306 181 6 16 312 177 477 9.99e-63 206
Msa0761790 AT5G05900.1 39.623 318 165 10 1 312 151 447 1.86e-62 205
Msa0761790 AT5G05880.1 38.438 320 175 7 1 314 147 450 2.98e-62 204
Msa0761790 AT1G78270.1 36.250 320 193 8 3 312 162 480 4.21e-61 202
Msa0761790 AT1G22360.2 36.066 305 171 7 16 312 177 465 7.32e-61 201
Msa0761790 AT1G22370.1 35.880 301 185 6 18 312 7 305 6.36e-60 194
Msa0761790 AT1G22370.2 35.127 316 197 6 3 312 162 475 9.63e-60 198
Msa0761790 AT3G46670.1 39.726 292 153 7 32 315 175 451 1.27e-59 197
Msa0761790 AT3G46660.1 38.699 292 157 6 32 315 181 458 3.36e-58 194
Msa0761790 AT3G46680.1 37.979 287 153 7 32 309 176 446 9.49e-58 192
Msa0761790 AT3G46700.1 38.144 291 158 7 32 314 170 446 3.64e-57 191
Msa0761790 AT5G05870.1 35.000 320 191 7 1 315 150 457 5.97e-56 188
Msa0761790 AT5G05860.1 39.103 312 162 9 10 312 155 447 2.29e-55 186
Msa0761790 AT5G59580.1 37.458 299 163 9 23 313 166 448 3.06e-55 186
Msa0761790 AT5G59590.1 37.671 292 158 8 26 309 171 446 6.13e-55 185
Msa0761790 AT5G38010.1 40.157 254 138 5 64 312 209 453 1.73e-53 181
Msa0761790 AT3G46690.1 39.116 294 151 8 32 314 175 451 2.09e-53 181
Msa0761790 AT5G38040.1 36.713 286 160 7 32 310 176 447 5.01e-53 180
Msa0761790 AT3G46720.1 40.708 226 120 4 90 314 230 442 7.07e-52 177
Msa0761790 AT3G55710.1 34.675 323 189 10 1 315 149 457 7.87e-52 177
Msa0761790 AT2G26480.1 34.028 288 172 7 32 312 169 445 4.41e-51 175
Msa0761790 AT3G55700.1 33.956 321 188 8 1 315 151 453 2.01e-50 174
Msa0761790 AT5G17040.2 33.007 306 186 8 15 315 49 340 3.54e-50 170
Msa0761790 AT3G46650.1 35.959 292 164 6 32 315 159 435 7.15e-50 171
Msa0761790 AT4G15480.1 35.686 255 148 4 67 310 227 476 1.04e-49 172
Msa0761790 AT2G43820.1 34.667 300 168 8 31 314 161 448 6.57e-49 169
Msa0761790 AT5G17050.1 32.787 305 184 7 16 315 171 459 7.98e-49 169
Msa0761790 AT2G43840.2 33.555 301 182 8 22 313 156 447 1.22e-48 169
Msa0761790 AT2G43840.1 33.553 304 178 9 22 313 156 447 1.62e-48 168
Msa0761790 AT5G17040.1 33.446 296 178 8 25 315 161 442 2.08e-48 168
Msa0761790 AT1G05675.1 35.517 290 168 5 31 309 168 449 6.26e-46 161
Msa0761790 AT5G17030.1 31.104 299 193 6 16 312 168 455 8.43e-46 161
Msa0761790 AT1G05680.1 35.135 296 161 9 31 309 168 449 1.00e-45 161
Msa0761790 AT2G23260.1 32.787 305 191 9 16 312 155 453 2.10e-45 160
Msa0761790 AT2G31750.1 34.375 256 151 8 68 312 205 454 1.14e-43 155
Msa0761790 AT2G31750.2 34.615 260 152 9 68 315 205 458 1.30e-43 156
Msa0761790 AT4G15500.1 32.248 307 186 5 16 309 162 459 1.31e-43 156
Msa0761790 AT2G15480.1 34.884 258 153 5 66 310 223 478 1.48e-43 156
Msa0761790 AT3G21560.1 31.034 319 187 10 9 310 168 470 2.93e-43 155
Msa0761790 AT3G53160.1 35.740 277 137 9 66 312 217 482 3.08e-43 155
Msa0761790 AT2G15490.3 35.907 259 149 7 66 310 220 475 3.09e-43 155
Msa0761790 AT2G23250.1 36.471 255 144 7 67 312 190 435 3.56e-43 154
Msa0761790 AT4G15490.1 33.577 274 158 7 49 309 201 463 6.56e-43 154
Msa0761790 AT2G15490.1 35.496 262 149 7 66 310 220 478 7.87e-43 154
Msa0761790 AT2G36760.1 35.870 276 150 7 66 316 223 496 8.48e-43 154
Msa0761790 AT5G26310.1 34.014 294 142 10 47 305 184 460 2.49e-42 152
Msa0761790 AT2G15480.2 33.209 268 154 5 66 310 223 488 6.12e-42 152
Msa0761790 AT1G30530.1 32.237 304 189 7 15 315 164 453 6.41e-42 151
Msa0761790 AT2G36780.1 33.803 284 161 8 56 316 213 492 1.13e-41 151
Msa0761790 AT4G15550.1 31.544 298 169 8 31 309 189 470 1.25e-41 150
Msa0761790 AT4G34131.1 32.117 274 170 6 54 314 211 481 2.30e-41 150
Msa0761790 AT2G28080.1 30.483 269 174 5 16 279 180 440 5.61e-41 149
Msa0761790 AT3G02100.1 36.797 231 128 5 88 314 245 461 9.87e-41 148
Msa0761790 AT4G01070.1 35.870 276 141 8 54 305 197 460 1.19e-40 148
Msa0761790 AT2G36770.1 33.217 286 160 9 56 314 213 494 1.49e-40 148
Msa0761790 AT2G36970.1 31.023 303 189 8 21 314 181 472 2.08e-40 147
Msa0761790 AT3G16520.3 31.333 300 179 9 24 310 172 457 7.06e-40 145
Msa0761790 AT1G05560.1 32.215 298 176 7 32 312 163 451 1.37e-39 145
Msa0761790 AT1G01420.1 36.029 272 133 11 63 308 206 462 1.70e-39 145
Msa0761790 AT1G01420.2 36.029 272 133 11 63 308 209 465 1.73e-39 145
Msa0761790 AT2G31790.1 28.713 303 197 6 22 312 161 456 1.85e-39 144
Msa0761790 AT3G16520.1 31.741 293 170 10 24 299 172 451 2.67e-39 144
Msa0761790 AT4G34138.1 34.940 249 145 6 66 301 223 467 2.90e-39 144
Msa0761790 AT1G05560.2 32.215 298 176 7 32 312 213 501 2.91e-39 145
Msa0761790 AT3G16520.2 33.607 244 141 7 24 258 172 403 5.98e-39 143
Msa0761790 AT2G36750.1 32.740 281 164 8 57 315 209 486 6.77e-39 143
Msa0761790 AT5G66690.1 32.601 273 138 6 60 301 197 454 7.84e-39 143
Msa0761790 AT3G50740.1 32.342 269 134 7 65 300 207 460 1.93e-38 142
Msa0761790 AT2G36800.1 32.509 283 164 9 57 316 213 491 2.06e-38 142
Msa0761790 AT1G05530.1 30.293 307 185 8 24 312 159 454 3.12e-38 141
Msa0761790 AT2G29730.1 27.532 316 203 7 12 317 168 467 7.48e-38 140
Msa0761790 AT2G29710.1 28.146 302 186 5 24 310 175 460 1.59e-37 139
Msa0761790 AT4G34135.1 32.721 272 168 5 56 314 214 483 7.94e-37 137
Msa0761790 AT1G01390.1 37.736 212 105 6 54 248 197 398 3.11e-36 136
Msa0761790 AT1G01390.2 37.736 212 105 6 54 248 214 415 3.58e-36 136
Msa0761790 AT2G36790.1 33.333 285 159 11 57 314 213 493 5.13e-35 133
Msa0761790 AT4G14090.1 31.034 290 177 8 31 309 175 452 6.28e-35 132
Msa0761790 AT4G36770.1 31.818 264 136 7 62 296 199 447 8.81e-35 132
Msa0761790 AT3G53150.1 30.675 326 177 11 25 310 191 507 1.80e-34 132
Msa0761790 AT1G07250.1 32.258 310 162 13 14 301 178 461 6.97e-34 129
Msa0761790 AT1G10400.1 32.857 280 158 11 42 309 198 459 7.09e-34 129
Msa0761790 AT2G18570.1 32.222 270 138 9 65 305 206 459 9.28e-34 129
Msa0761790 AT1G24100.1 36.318 201 119 3 118 312 261 458 1.42e-33 128
Msa0761790 AT1G73880.1 27.385 325 205 11 9 316 160 470 2.14e-33 128
Msa0761790 AT2G18560.1 31.481 270 140 9 65 305 116 369 1.11e-32 125
Msa0761790 AT1G07240.1 28.990 307 180 10 14 301 177 464 1.52e-31 123
Msa0761790 AT2G30140.2 28.435 313 183 11 16 312 163 450 5.15e-31 121
Msa0761790 AT2G30140.1 28.387 310 181 11 19 312 167 451 8.43e-31 120
Msa0761790 AT4G15280.1 29.577 284 161 7 55 310 199 471 8.63e-31 121
Msa0761790 AT4G15260.1 30.769 273 153 8 63 310 91 352 1.23e-30 119
Msa0761790 AT4G15280.2 29.577 284 161 7 55 310 231 503 1.62e-30 120
Msa0761790 AT1G07260.1 30.078 256 151 8 64 302 217 461 2.29e-30 120
Msa0761790 AT2G29740.1 27.483 302 187 8 24 309 186 471 5.14e-30 119
Msa0761790 AT5G37950.2 38.372 172 93 4 64 231 175 337 9.74e-30 116
Msa0761790 AT5G37950.1 38.372 172 93 4 64 231 181 343 1.10e-29 116
Msa0761790 AT5G03490.1 30.651 261 153 9 66 315 222 465 1.30e-29 117
Msa0761790 AT3G21780.1 34.146 205 113 5 66 257 207 402 2.04e-29 117
Msa0761790 AT5G14860.1 33.333 264 145 12 63 310 225 473 3.82e-29 117
Msa0761790 AT3G21800.1 36.364 209 104 7 65 257 211 406 4.33e-29 116
Msa0761790 AT5G12890.1 37.895 190 98 6 65 243 224 404 9.35e-29 115
Msa0761790 AT1G06000.1 30.515 272 161 9 57 309 168 430 1.36e-28 114
Msa0761790 AT3G21790.1 29.839 248 150 6 22 257 176 411 1.45e-28 115
Msa0761790 AT3G22250.1 32.609 184 116 4 88 268 242 420 1.50e-28 114
Msa0761790 AT2G29750.1 27.425 299 188 7 25 309 187 470 5.86e-28 113
Msa0761790 AT2G16890.2 28.364 275 169 8 50 310 205 465 1.15e-27 112
Msa0761790 AT2G30150.1 27.864 323 194 12 8 315 141 439 3.46e-27 110
Msa0761790 AT2G30150.2 27.864 323 194 12 8 315 157 455 4.90e-27 110
Msa0761790 AT3G21760.1 33.493 209 113 5 66 258 217 415 5.35e-27 110
Msa0761790 AT2G16890.3 31.905 210 124 6 50 254 205 400 2.19e-26 108
Msa0761790 AT1G51210.1 31.351 185 113 4 66 248 217 389 1.42e-25 106
Msa0761790 AT5G65550.1 42.105 133 74 3 125 256 270 400 3.58e-25 105
Msa0761790 AT3G21750.1 31.878 229 125 6 54 263 192 408 7.86e-25 104
Msa0761790 AT5G49690.1 33.846 195 105 8 125 312 267 444 3.05e-23 99.8
Msa0761790 AT2G22590.1 33.140 172 103 5 125 286 274 443 2.34e-18 85.9
Msa0761790 AT4G01070.2 37.815 119 61 3 54 169 197 305 2.69e-15 75.9
Msa0761790 AT5G53990.1 31.387 137 89 2 125 257 244 379 3.49e-15 76.3
Msa0761790 AT1G64910.1 30.435 138 89 4 125 257 244 379 2.11e-14 73.9
Msa0761790 AT5G54010.1 31.159 138 88 4 125 257 250 385 1.01e-12 68.9
Msa0761790 AT4G27560.1 30.657 137 88 4 125 256 250 384 1.02e-12 68.9
Msa0761790 AT4G27570.1 30.657 137 88 4 125 256 250 384 1.59e-12 68.2
Msa0761790 AT4G09500.2 32.308 130 81 4 132 256 251 378 8.31e-12 66.2
Msa0761790 AT4G09500.1 32.308 130 81 4 132 256 226 353 8.86e-12 65.9
Msa0761790 AT4G34135.2 32.174 115 75 2 56 169 214 326 1.72e-11 64.7
Msa0761790 AT1G50580.1 33.333 129 79 4 125 248 245 371 5.75e-11 63.5

Find 95 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5_2:+19361458 Msa0761790:five_prime_UTR
TCTATCCACTTTGAAGAAAT+TGG 0.151742 5_2:-19362878 None:intergenic
TGCTACTAAAATGGCGGATT+TGG 0.188389 5_2:+19363389 Msa0761790:CDS
TGGGGAAGTGGAGACGAATT+TGG 0.191985 5_2:-19362783 None:intergenic
AGGCTTACCATACATATTTA+TGG 0.193194 5_2:-19361409 None:intergenic
TTCAAAATCTGCTACTAAAA+TGG 0.200580 5_2:+19363380 Msa0761790:CDS
TAAGGAGAGAGGTTTGATTT+TGG 0.221542 5_2:+19363101 Msa0761790:CDS
CTAACCCAAGCATCACTTAA+AGG 0.264331 5_2:+19362709 Msa0761790:CDS
ACTGATTTGGCTGCTGAGTT+TGG 0.266869 5_2:+19361504 Msa0761790:five_prime_UTR
GAGAAGAAATACTTGAGTTT+TGG 0.290736 5_2:+19362980 Msa0761790:CDS
GGGGAAGTGGAGACGAATTT+GGG 0.316790 5_2:-19362782 None:intergenic
AAGGAGAAGCATCCTGGATT+TGG 0.317655 5_2:+19361360 Msa0761790:five_prime_UTR
GACGAATTTGGGAGAGAATT+GGG 0.319264 5_2:-19362771 None:intergenic
AAGATTTGATTCAGTATATA+AGG 0.326472 5_2:+19363457 Msa0761790:CDS
GTGCATAGCATTACCTCTAA+TGG 0.327258 5_2:-19361616 None:intergenic
TTTCGGTACATCAAACAAAA+TGG 0.331422 5_2:+19362657 Msa0761790:CDS
CTGATTTGGCTGCTGAGTTT+GGG 0.334780 5_2:+19361505 Msa0761790:five_prime_UTR
AGACGAATTTGGGAGAGAAT+TGG 0.348002 5_2:-19362772 None:intergenic
GTAAGTGAGGTTTGGAAGCT+TGG 0.358809 5_2:+19363276 Msa0761790:CDS
GGGCCAATAGTGTAGAGTTT+GGG 0.365185 5_2:-19362802 None:intergenic
CTGATCAACCACTTAATAGT+AGG 0.368297 5_2:+19363250 Msa0761790:CDS
CATTGCCTTTAAGTGATGCT+TGG 0.369928 5_2:-19362714 None:intergenic
TTATATTATGGTGAACAAAA+AGG 0.373675 5_2:+19363350 Msa0761790:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5_2:+19363217 Msa0761790:CDS
CAAAATAAGGAGAAGCATCC+TGG 0.377170 5_2:+19361354 Msa0761790:five_prime_UTR
AAACTTTATCTAAAACAATA+TGG 0.380820 5_2:-19362681 None:intergenic
GTTCTGTATGCCCAAGCTCT+TGG 0.383983 5_2:+19361578 Msa0761790:exon
GAATATGGTGAATTATATTA+TGG 0.384555 5_2:+19363338 Msa0761790:CDS
CAAATCTTGGAGGTTATTGT+AGG 0.399409 5_2:-19363442 None:intergenic
TGGGCCAATAGTGTAGAGTT+TGG 0.401252 5_2:-19362803 None:intergenic
TGGTGACCTTGCTACTGATT+TGG 0.401952 5_2:+19361491 Msa0761790:five_prime_UTR
TCGGAATGTTGTTGAGAATA+TGG 0.404862 5_2:+19363323 Msa0761790:CDS
ATTGCCTTTAAGTGATGCTT+GGG 0.413731 5_2:-19362713 None:intergenic
TAGTGTAGAGTTTGGGGAAG+TGG 0.414276 5_2:-19362795 None:intergenic
TTCCCCAAACTCTACACTAT+TGG 0.415394 5_2:+19362799 Msa0761790:CDS
CTCATTGCACTCCAAGAGCT+TGG 0.419151 5_2:-19361589 None:intergenic
TGCAATGAGCTTCCCATTAG+AGG 0.422593 5_2:+19361603 Msa0761790:CDS
TGTGGATGTACTCAGTGTTT+AGG 0.425236 5_2:-19361248 None:intergenic
ATGGTCTTGAATTGAAGCTT+AGG 0.425350 5_2:-19361321 None:intergenic
TTATATACTGAATCAAATCT+TGG 0.428359 5_2:-19363455 None:intergenic
TCAGTTGTATATGTTAGCTT+TGG 0.431301 5_2:+19362937 Msa0761790:CDS
TGAGGTTTGGAAGCTTGGAT+TGG 0.438209 5_2:+19363281 Msa0761790:CDS
GTAGGTTTGTAAGTGAGGTT+TGG 0.440134 5_2:+19363268 Msa0761790:CDS
CTTACAAACCTACTATTAAG+TGG 0.443768 5_2:-19363258 None:intergenic
TGCATAGCATTACCTCTAAT+GGG 0.444508 5_2:-19361615 None:intergenic
AAATAAGGCCAACAAATCAT+AGG 0.459700 5_2:-19363225 None:intergenic
TTCTTCTCTTGTCATTGTTG+TGG 0.462665 5_2:-19362965 None:intergenic
ACCATCAGGATTTACACTCT+TGG 0.464702 5_2:-19363415 None:intergenic
ACTTGAGGAAAGAACTAGTA+AGG 0.465489 5_2:+19363083 Msa0761790:CDS
CAACTCCAATTTCTTCAAAG+TGG 0.471156 5_2:+19362873 Msa0761790:CDS
TGTAGAGATCTTCCACGTTT+CGG 0.471834 5_2:+19362640 Msa0761790:CDS
ATTTCCTCCATAAATATGTA+TGG 0.483586 5_2:+19361402 Msa0761790:five_prime_UTR
CTGTTGCTGCTAGTAGCGTC+TGG 0.486057 5_2:+19361550 Msa0761790:five_prime_UTR
CGAATTATGTTCTCCATGCC+TGG 0.491483 5_2:-19362616 None:intergenic
TCATTGCACTCCAAGAGCTT+GGG 0.494921 5_2:-19361588 None:intergenic
ACTTTAGAGAGTGTGGTTTG+TGG 0.496972 5_2:+19363198 Msa0761790:CDS
GTGTTGACATGGCCTTGTGC+TGG 0.499910 5_2:-19361174 None:intergenic
CTATTAGCCCATAAAATATG+AGG 0.502418 5_2:+19363481 Msa0761790:exon
TGGTCTTGAATTGAAGCTTA+GGG 0.509318 5_2:-19361320 None:intergenic
TATACTGAATCAAATCTTGG+AGG 0.514232 5_2:-19363452 None:intergenic
ACAATAATATCTCTCAAAGA+AGG 0.522945 5_2:-19361429 None:intergenic
ATTTATAGGCGACGAGGACA+TGG 0.524524 5_2:+19362573 Msa0761790:intron
ACATGGCCTTGTGCTGGACA+TGG 0.525229 5_2:-19361168 None:intergenic
TTATTGTAGGAGGAACCATC+AGG 0.526435 5_2:-19363429 None:intergenic
GAAAGAACTAGTAAGGAGAG+AGG 0.530175 5_2:+19363090 Msa0761790:CDS
TAATAGTAGGTTTGTAAGTG+AGG 0.531816 5_2:+19363263 Msa0761790:CDS
ACGAATTTGGGAGAGAATTG+GGG 0.540729 5_2:-19362770 None:intergenic
CATAAGAAACGTGCCAGGCA+TGG 0.541357 5_2:+19362603 Msa0761790:CDS
ATCTTGGAGGTTATTGTAGG+AGG 0.543778 5_2:-19363439 None:intergenic
GTATTGAGGTGGTGGTGAAG+TGG 0.552097 5_2:-19362823 None:intergenic
AGAATCGAGCCATGTCATGC+AGG 0.553167 5_2:-19362902 None:intergenic
CAAGCATCACTTAAAGGCAA+TGG 0.555557 5_2:+19362715 Msa0761790:CDS
GAATTCTACTTTAGAGAGTG+TGG 0.575911 5_2:+19363191 Msa0761790:CDS
AGAACTAATAAAAGAACTTG+AGG 0.581885 5_2:+19363068 Msa0761790:CDS
TTTGGAGTGGGCTCCACAAG+AGG 0.583012 5_2:+19363119 Msa0761790:CDS
TGTGACAAAACTTCCTCTTG+TGG 0.586898 5_2:-19363132 None:intergenic
TATTGAGGTGGTGGTGAAGT+GGG 0.589759 5_2:-19362822 None:intergenic
TGGATAGAACCTGCATGACA+TGG 0.591199 5_2:+19362893 Msa0761790:CDS
ACATATACAACTGACTTCAA+CGG 0.597249 5_2:-19362928 None:intergenic
TCCAAGAGTGTAAATCCTGA+TGG 0.602064 5_2:+19363414 Msa0761790:CDS
CACATCATAAGAAACGTGCC+AGG 0.602381 5_2:+19362598 Msa0761790:CDS
ATCTTCCCATGTCCAGCACA+AGG 0.602792 5_2:+19361162 Msa0761790:five_prime_UTR
TTTAGTTTATCGAAGATGAG+TGG 0.602955 5_2:+19363698 Msa0761790:three_prime_UTR
AAAATCTGCTACTAAAATGG+CGG 0.603184 5_2:+19363383 Msa0761790:CDS
CATGGCCTTGTGCTGGACAT+GGG 0.603513 5_2:-19361167 None:intergenic
GCTTGAGCATTGTGTTGACA+TGG 0.604890 5_2:-19361185 None:intergenic
TCAAACTAATGAGTCTGTTG+TGG 0.611017 5_2:-19361266 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.621309 5_2:-19362801 None:intergenic
CTTACCATACATATTTATGG+AGG 0.622125 5_2:-19361406 None:intergenic
CAGCAGCCAAATCAGTAGCA+AGG 0.634571 5_2:-19361497 None:intergenic
ATATGAAAGATGTTTGTGAT+CGG 0.639488 5_2:+19363304 Msa0761790:CDS
TTGTTTGATGTACCGAAACG+TGG 0.645855 5_2:-19362652 None:intergenic
GTGGGTGATTAGACCAAACA+TGG 0.685305 5_2:+19363035 Msa0761790:CDS
TGTTTAATTTATAGGCGACG+AGG 0.686500 5_2:+19362567 Msa0761790:intron
CATGGGAAGATTAACACATG+TGG 0.740669 5_2:-19361150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAAATCAAGAAATTA+GGG - chr5_2:19361698-19361717 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG - chr5_2:19361699-19361718 None:intergenic 10.0%
!! AGATAAGTTTAAATAAAATA+AGG - chr5_2:19362261-19362280 None:intergenic 10.0%
!! ATTAAGTAAAAAAAATAGAA+AGG - chr5_2:19362490-19362509 None:intergenic 10.0%
!! TTAATTATTATACATATGCA+AGG + chr5_2:19361710-19361729 Msa0761790:intron 15.0%
!!! ACTTATCTTTAATTTTATGA+TGG + chr5_2:19362273-19362292 Msa0761790:intron 15.0%
!! TTATTAGATAAAACTTATGT+AGG - chr5_2:19362401-19362420 None:intergenic 15.0%
!!! AAACTTTATCTAAAACAATA+TGG - chr5_2:19362684-19362703 None:intergenic 15.0%
!! AAATTGAGATTGTTGAAAAA+TGG + chr5_2:19361122-19361141 Msa0761790:five_prime_UTR 20.0%
!!! GAAAATAAGTTGCATTATTT+TGG + chr5_2:19361458-19361477 Msa0761790:five_prime_UTR 20.0%
!! TTTAAATAAAATAAGGCATG+TGG - chr5_2:19362254-19362273 None:intergenic 20.0%
!!! GTTTTATCTAATAAAAGAGT+AGG + chr5_2:19362407-19362426 Msa0761790:intron 20.0%
!! TATAACTCATATTAGAATTG+TGG - chr5_2:19362534-19362553 None:intergenic 20.0%
!! GAATATGGTGAATTATATTA+TGG + chr5_2:19363338-19363357 Msa0761790:CDS 20.0%
!! TTATATTATGGTGAACAAAA+AGG + chr5_2:19363350-19363369 Msa0761790:CDS 20.0%
!! TTATATACTGAATCAAATCT+TGG - chr5_2:19363458-19363477 None:intergenic 20.0%
!! AAGATTTGATTCAGTATATA+AGG + chr5_2:19363457-19363476 Msa0761790:CDS 20.0%
!!! AAATATGAGAAGTTTTTAGT+AGG - chr5_2:19363523-19363542 None:intergenic 20.0%
!!! CTTATTTTGAAAATCAGAGA+TGG - chr5_2:19361343-19361362 None:intergenic 25.0%
!! CATCTCTGATTTTCAAAATA+AGG + chr5_2:19361341-19361360 Msa0761790:five_prime_UTR 25.0%
! ATTTCCTCCATAAATATGTA+TGG + chr5_2:19361402-19361421 Msa0761790:five_prime_UTR 25.0%
! ACAATAATATCTCTCAAAGA+AGG - chr5_2:19361432-19361451 None:intergenic 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG + chr5_2:19361462-19361481 Msa0761790:five_prime_UTR 25.0%
! ATCATGGGAAAATACTTAAT+TGG + chr5_2:19361883-19361902 Msa0761790:intron 25.0%
! TCATGGGAAAATACTTAATT+GGG + chr5_2:19361884-19361903 Msa0761790:intron 25.0%
! TAAGACTTTGTAAAAGAGAT+TGG + chr5_2:19362137-19362156 Msa0761790:intron 25.0%
! AAGACTTTGTAAAAGAGATT+GGG + chr5_2:19362138-19362157 Msa0761790:intron 25.0%
! AGCTTATTGAAATATGACAT+AGG - chr5_2:19362203-19362222 None:intergenic 25.0%
!! AGAAAGGTGTATAAAATAAG+AGG - chr5_2:19362474-19362493 None:intergenic 25.0%
!! GTTCTGGTTGTTTAATTTAT+AGG + chr5_2:19362559-19362578 Msa0761790:intron 25.0%
!!! TTGTTTTTTTCATGGTATTG+AGG - chr5_2:19362840-19362859 None:intergenic 25.0%
!!! TGATGATGTTGTTTTTTTCA+TGG - chr5_2:19362848-19362867 None:intergenic 25.0%
! AGAACTAATAAAAGAACTTG+AGG + chr5_2:19363068-19363087 Msa0761790:CDS 25.0%
! ATATGAAAGATGTTTGTGAT+CGG + chr5_2:19363304-19363323 Msa0761790:CDS 25.0%
! TTCAAAATCTGCTACTAAAA+TGG + chr5_2:19363380-19363399 Msa0761790:CDS 25.0%
!! TCTCTTTTGATACAAATAAG+TGG + chr5_2:19363770-19363789 Msa0761790:three_prime_UTR 25.0%
CTTACCATACATATTTATGG+AGG - chr5_2:19361409-19361428 None:intergenic 30.0%
AGGCTTACCATACATATTTA+TGG - chr5_2:19361412-19361431 None:intergenic 30.0%
!!! ATTATTTTGGATGGAGGTTT+TGG + chr5_2:19361471-19361490 Msa0761790:five_prime_UTR 30.0%
AATGTTATAGACGAACATCA+TGG + chr5_2:19361867-19361886 Msa0761790:intron 30.0%
ATGTTATAGACGAACATCAT+GGG + chr5_2:19361868-19361887 Msa0761790:intron 30.0%
AAATACTTAATTGGGCACAA+AGG + chr5_2:19361892-19361911 Msa0761790:intron 30.0%
TTTCGGTACATCAAACAAAA+TGG + chr5_2:19362657-19362676 Msa0761790:CDS 30.0%
!!! TTTTTTTCATGGTATTGAGG+TGG - chr5_2:19362837-19362856 None:intergenic 30.0%
! TCTATCCACTTTGAAGAAAT+TGG - chr5_2:19362881-19362900 None:intergenic 30.0%
! ACATATACAACTGACTTCAA+CGG - chr5_2:19362931-19362950 None:intergenic 30.0%
! TCAGTTGTATATGTTAGCTT+TGG + chr5_2:19362937-19362956 Msa0761790:CDS 30.0%
! GAGAAGAAATACTTGAGTTT+TGG + chr5_2:19362980-19362999 Msa0761790:CDS 30.0%
ACAGCAAAAAATCATTCTTG+TGG + chr5_2:19363016-19363035 Msa0761790:CDS 30.0%
CAGCAAAAAATCATTCTTGT+GGG + chr5_2:19363017-19363036 Msa0761790:CDS 30.0%
! TCTTTTTCTTGTACCATGTT+TGG - chr5_2:19363051-19363070 None:intergenic 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5_2:19363228-19363247 None:intergenic 30.0%
AGTGGTTGATCAGAAAAATA+AGG - chr5_2:19363243-19363262 None:intergenic 30.0%
CTTACAAACCTACTATTAAG+TGG - chr5_2:19363261-19363280 None:intergenic 30.0%
TAATAGTAGGTTTGTAAGTG+AGG + chr5_2:19363263-19363282 Msa0761790:CDS 30.0%
TATTATGGTGAACAAAAAGG+AGG + chr5_2:19363353-19363372 Msa0761790:CDS 30.0%
AAAATCTGCTACTAAAATGG+CGG + chr5_2:19363383-19363402 Msa0761790:CDS 30.0%
TATACTGAATCAAATCTTGG+AGG - chr5_2:19363455-19363474 None:intergenic 30.0%
CTATTAGCCCATAAAATATG+AGG + chr5_2:19363481-19363500 Msa0761790:exon 30.0%
!! TTTTTAGTAGGAGAATGGAA+GGG - chr5_2:19363511-19363530 None:intergenic 30.0%
!!! AGAAGTTTTTAGTAGGAGAA+TGG - chr5_2:19363516-19363535 None:intergenic 30.0%
TACATACTTCAAAAACATCG+AGG + chr5_2:19363584-19363603 Msa0761790:three_prime_UTR 30.0%
ACATACTTCAAAAACATCGA+GGG + chr5_2:19363585-19363604 Msa0761790:three_prime_UTR 30.0%
! TTTAGTTTATCGAAGATGAG+TGG + chr5_2:19363698-19363717 Msa0761790:three_prime_UTR 30.0%
!!! AGTGGTTTTGAGTCATTTTT+TGG + chr5_2:19363716-19363735 Msa0761790:three_prime_UTR 30.0%
TCAAACTAATGAGTCTGTTG+TGG - chr5_2:19361269-19361288 None:intergenic 35.0%
! TGGTCTTGAATTGAAGCTTA+GGG - chr5_2:19361323-19361342 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG - chr5_2:19361324-19361343 None:intergenic 35.0%
! ACAATGTTTTCTCCAAATCC+AGG - chr5_2:19361375-19361394 None:intergenic 35.0%
!!! AGTTGCATTATTTTGGATGG+AGG + chr5_2:19361465-19361484 Msa0761790:five_prime_UTR 35.0%
TGCATAGCATTACCTCTAAT+GGG - chr5_2:19361618-19361637 None:intergenic 35.0%
! CAAACTGCTCTTAGAGTTTT+TGG + chr5_2:19361758-19361777 Msa0761790:intron 35.0%
TTACTCTGAGCAATCTATGT+GGG + chr5_2:19362335-19362354 Msa0761790:intron 35.0%
TATGAGTTATATGCGTGTTC+TGG + chr5_2:19362543-19362562 Msa0761790:intron 35.0%
! TGTTTAATTTATAGGCGACG+AGG + chr5_2:19362567-19362586 Msa0761790:intron 35.0%
ATTGCCTTTAAGTGATGCTT+GGG - chr5_2:19362716-19362735 None:intergenic 35.0%
CAACTCCAATTTCTTCAAAG+TGG + chr5_2:19362873-19362892 Msa0761790:CDS 35.0%
TTCTTCTCTTGTCATTGTTG+TGG - chr5_2:19362968-19362987 None:intergenic 35.0%
!! GAAATACTTGAGTTTTGGCA+CGG + chr5_2:19362985-19363004 Msa0761790:CDS 35.0%
ACTTGAGGAAAGAACTAGTA+AGG + chr5_2:19363083-19363102 Msa0761790:CDS 35.0%
!! TAAGGAGAGAGGTTTGATTT+TGG + chr5_2:19363101-19363120 Msa0761790:CDS 35.0%
!! CATTTTTGACACATAGTGGA+TGG + chr5_2:19363169-19363188 Msa0761790:CDS 35.0%
! GAATTCTACTTTAGAGAGTG+TGG + chr5_2:19363191-19363210 Msa0761790:CDS 35.0%
CTGATCAACCACTTAATAGT+AGG + chr5_2:19363250-19363269 Msa0761790:CDS 35.0%
TCGGAATGTTGTTGAGAATA+TGG + chr5_2:19363323-19363342 Msa0761790:CDS 35.0%
CAAATCTTGGAGGTTATTGT+AGG - chr5_2:19363445-19363464 None:intergenic 35.0%
! TTTTAGTAGGAGAATGGAAG+GGG - chr5_2:19363510-19363529 None:intergenic 35.0%
!!! GTTTTTAGTAGGAGAATGGA+AGG - chr5_2:19363512-19363531 None:intergenic 35.0%
CATGGGAAGATTAACACATG+TGG - chr5_2:19361153-19361172 None:intergenic 40.0%
TGTGGATGTACTCAGTGTTT+AGG - chr5_2:19361251-19361270 None:intergenic 40.0%
!! CAAAATAAGGAGAAGCATCC+TGG + chr5_2:19361354-19361373 Msa0761790:five_prime_UTR 40.0%
GTGCATAGCATTACCTCTAA+TGG - chr5_2:19361619-19361638 None:intergenic 40.0%
ACTTGTACGTTAGATCCGTT+TGG + chr5_2:19362080-19362099 Msa0761790:intron 40.0%
TACGTTAGATCCGTTTGGAT+TGG + chr5_2:19362085-19362104 Msa0761790:intron 40.0%
GTAAGCTAAGCCAATCCAAA+CGG - chr5_2:19362098-19362117 None:intergenic 40.0%
AAGGCATGTGGAATGAGAAA+AGG - chr5_2:19362242-19362261 None:intergenic 40.0%
CTTACTCTGAGCAATCTATG+TGG + chr5_2:19362334-19362353 Msa0761790:intron 40.0%
! GTATAAAATAAGAGGAGCGC+TGG - chr5_2:19362466-19362485 None:intergenic 40.0%
TGTAGAGATCTTCCACGTTT+CGG + chr5_2:19362640-19362659 Msa0761790:CDS 40.0%
TTGTTTGATGTACCGAAACG+TGG - chr5_2:19362655-19362674 None:intergenic 40.0%
CTAACCCAAGCATCACTTAA+AGG + chr5_2:19362709-19362728 Msa0761790:CDS 40.0%
CATTGCCTTTAAGTGATGCT+TGG - chr5_2:19362717-19362736 None:intergenic 40.0%
CAAGCATCACTTAAAGGCAA+TGG + chr5_2:19362715-19362734 Msa0761790:CDS 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5_2:19362773-19362792 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5_2:19362774-19362793 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5_2:19362775-19362794 None:intergenic 40.0%
TTCCCCAAACTCTACACTAT+TGG + chr5_2:19362799-19362818 Msa0761790:CDS 40.0%
!! TTTTCATGGTATTGAGGTGG+TGG - chr5_2:19362834-19362853 None:intergenic 40.0%
GAAAGAACTAGTAAGGAGAG+AGG + chr5_2:19363090-19363109 Msa0761790:CDS 40.0%
!! AGAGAGGTTTGATTTTGGAG+TGG + chr5_2:19363106-19363125 Msa0761790:CDS 40.0%
!!! GAGAGGTTTGATTTTGGAGT+GGG + chr5_2:19363107-19363126 Msa0761790:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG - chr5_2:19363135-19363154 None:intergenic 40.0%
!! AGAGGAAGTTTTGTCACACA+AGG + chr5_2:19363137-19363156 Msa0761790:CDS 40.0%
! GTTTTGTCACACAAGGCAAT+TGG + chr5_2:19363144-19363163 Msa0761790:CDS 40.0%
! GGTGCATTTTTGACACATAG+TGG + chr5_2:19363165-19363184 Msa0761790:CDS 40.0%
! ACTTTAGAGAGTGTGGTTTG+TGG + chr5_2:19363198-19363217 Msa0761790:CDS 40.0%
GTAGGTTTGTAAGTGAGGTT+TGG + chr5_2:19363268-19363287 Msa0761790:CDS 40.0%
!! TGCTACTAAAATGGCGGATT+TGG + chr5_2:19363389-19363408 Msa0761790:CDS 40.0%
! TCCAAGAGTGTAAATCCTGA+TGG + chr5_2:19363414-19363433 Msa0761790:CDS 40.0%
ACCATCAGGATTTACACTCT+TGG - chr5_2:19363418-19363437 None:intergenic 40.0%
TTATTGTAGGAGGAACCATC+AGG - chr5_2:19363432-19363451 None:intergenic 40.0%
ATCTTGGAGGTTATTGTAGG+AGG - chr5_2:19363442-19363461 None:intergenic 40.0%
! GGGGAAGCCTCATATTTTAT+GGG - chr5_2:19363491-19363510 None:intergenic 40.0%
! AGGGGAAGCCTCATATTTTA+TGG - chr5_2:19363492-19363511 None:intergenic 40.0%
ACTTCAAAAACATCGAGGGA+CGG + chr5_2:19363589-19363608 Msa0761790:three_prime_UTR 40.0%
! GCTTGAGCATTGTGTTGACA+TGG - chr5_2:19361188-19361207 None:intergenic 45.0%
!! AAGGAGAAGCATCCTGGATT+TGG + chr5_2:19361360-19361379 Msa0761790:five_prime_UTR 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5_2:19361491-19361510 Msa0761790:five_prime_UTR 45.0%
!! ACTGATTTGGCTGCTGAGTT+TGG + chr5_2:19361504-19361523 Msa0761790:five_prime_UTR 45.0%
!! CTGATTTGGCTGCTGAGTTT+GGG + chr5_2:19361505-19361524 Msa0761790:five_prime_UTR 45.0%
TCATTGCACTCCAAGAGCTT+GGG - chr5_2:19361591-19361610 None:intergenic 45.0%
TGCAATGAGCTTCCCATTAG+AGG + chr5_2:19361603-19361622 Msa0761790:CDS 45.0%
!! TTGGATTGGCTTAGCTTACG+TGG + chr5_2:19362099-19362118 Msa0761790:intron 45.0%
!! TGGATTGGCTTAGCTTACGT+GGG + chr5_2:19362100-19362119 Msa0761790:intron 45.0%
ATTTATAGGCGACGAGGACA+TGG + chr5_2:19362573-19362592 Msa0761790:intron 45.0%
CACATCATAAGAAACGTGCC+AGG + chr5_2:19362598-19362617 Msa0761790:CDS 45.0%
CGAATTATGTTCTCCATGCC+TGG - chr5_2:19362619-19362638 None:intergenic 45.0%
TAGTGTAGAGTTTGGGGAAG+TGG - chr5_2:19362798-19362817 None:intergenic 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5_2:19362804-19362823 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5_2:19362805-19362824 None:intergenic 45.0%
TGGGCCAATAGTGTAGAGTT+TGG - chr5_2:19362806-19362825 None:intergenic 45.0%
! TATTGAGGTGGTGGTGAAGT+GGG - chr5_2:19362825-19362844 None:intergenic 45.0%
TGGATAGAACCTGCATGACA+TGG + chr5_2:19362893-19362912 Msa0761790:CDS 45.0%
GTGGGTGATTAGACCAAACA+TGG + chr5_2:19363035-19363054 Msa0761790:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5_2:19363217-19363236 Msa0761790:CDS 45.0%
GTAAGTGAGGTTTGGAAGCT+TGG + chr5_2:19363276-19363295 Msa0761790:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG + chr5_2:19363281-19363300 Msa0761790:CDS 45.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5_2:19361162-19361181 Msa0761790:five_prime_UTR 50.0%
CAGCAGCCAAATCAGTAGCA+AGG - chr5_2:19361500-19361519 None:intergenic 50.0%
GTTCTGTATGCCCAAGCTCT+TGG + chr5_2:19361578-19361597 Msa0761790:exon 50.0%
CTCATTGCACTCCAAGAGCT+TGG - chr5_2:19361592-19361611 None:intergenic 50.0%
GAAAAGGCAAAGCTCGCACT+AGG - chr5_2:19362226-19362245 None:intergenic 50.0%
CATAAGAAACGTGCCAGGCA+TGG + chr5_2:19362603-19362622 Msa0761790:CDS 50.0%
GGGGAAGTGGAGACGAATTT+GGG - chr5_2:19362785-19362804 None:intergenic 50.0%
TGGGGAAGTGGAGACGAATT+TGG - chr5_2:19362786-19362805 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+TGG - chr5_2:19362826-19362845 None:intergenic 50.0%
AGAATCGAGCCATGTCATGC+AGG - chr5_2:19362905-19362924 None:intergenic 50.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5_2:19361170-19361189 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5_2:19361171-19361190 None:intergenic 55.0%
!! GTGTTGACATGGCCTTGTGC+TGG - chr5_2:19361177-19361196 None:intergenic 55.0%
CTGTTGCTGCTAGTAGCGTC+TGG + chr5_2:19361550-19361569 Msa0761790:five_prime_UTR 55.0%
! TTTGGAGTGGGCTCCACAAG+AGG + chr5_2:19363119-19363138 Msa0761790:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 19361120 19363846 19361120 ID=Msa0761790;Name=Msa0761790
chr5_2 mRNA 19361120 19363846 19361120 ID=Msa0761790-mRNA-1;Parent=Msa0761790;Name=Msa0761790-mRNA-1;_AED=0.30;_eAED=0.30;_QI=465|1|1|1|0|0.5|2|352|317
chr5_2 exon 19361120 19361624 19361120 ID=Msa0761790-mRNA-1:exon:8285;Parent=Msa0761790-mRNA-1
chr5_2 exon 19362581 19363846 19362581 ID=Msa0761790-mRNA-1:exon:8286;Parent=Msa0761790-mRNA-1
chr5_2 five_prime_UTR 19361120 19361584 19361120 ID=Msa0761790-mRNA-1:five_prime_utr;Parent=Msa0761790-mRNA-1
chr5_2 CDS 19361585 19361624 19361585 ID=Msa0761790-mRNA-1:cds;Parent=Msa0761790-mRNA-1
chr5_2 CDS 19362581 19363494 19362581 ID=Msa0761790-mRNA-1:cds;Parent=Msa0761790-mRNA-1
chr5_2 three_prime_UTR 19363495 19363846 19363495 ID=Msa0761790-mRNA-1:three_prime_utr;Parent=Msa0761790-mRNA-1
Gene Sequence

>Msa0761790

ATGCCCAAGCTCTTGGAGTGCAATGAGCTTCCCATTAGAGGCGACGAGGACATGGATCACATCATAAGAAACGTGCCAGGCATGGAGAACATAATTCGATGTAGAGATCTTCCACGTTTCGGTACATCAAACAAAATGGACCATATTGTTTTAGATAAAGTTTTACAACTAACCCAAGCATCACTTAAAGGCAATGGAGTAATACTCAACACATTTGAAGATCTAGAGTCCCCAATTCTCTCCCAAATTCGTCTCCACTTCCCCAAACTCTACACTATTGGCCCACTTCACCACCACCTCAATACCATGAAAAAAACAACATCATCATCTTTCAACTCCAATTTCTTCAAAGTGGATAGAACCTGCATGACATGGCTCGATTCTCAACCGTTGAAGTCAGTTGTATATGTTAGCTTTGGAAGCACCACAACAATGACAAGAGAAGAAATACTTGAGTTTTGGCACGGTTTGATGAACAGCAAAAAATCATTCTTGTGGGTGATTAGACCAAACATGGTACAAGAAAAAGAACTAATAAAAGAACTTGAGGAAAGAACTAGTAAGGAGAGAGGTTTGATTTTGGAGTGGGCTCCACAAGAGGAAGTTTTGTCACACAAGGCAATTGGTGCATTTTTGACACATAGTGGATGGAATTCTACTTTAGAGAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTTCTGATCAACCACTTAATAGTAGGTTTGTAAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATCGGAATGTTGTTGAGAATATGGTGAATTATATTATGGTGAACAAAAAGGAGGAGTTTTCAAAATCTGCTACTAAAATGGCGGATTTGGCTTCCAAGAGTGTAAATCCTGATGGTTCCTCCTACAATAACCTCCAAGATTTGATTCAGTATATAAGGTCTATTAGCCCATAA
Protein sequence

>Msa0761790

MPKLLECNELPIRGDEDMDHIIRNVPGMENIIRCRDLPRFGTSNKMDHIVLDKVLQLTQASLKGNGVILNTFEDLESPILSQIRLHFPKLYTIGPLHHHLNTMKKTTSSSFNSNFFKVDRTCMTWLDSQPLKSVVYVSFGSTTTMTREEILEFWHGLMNSKKSFLWVIRPNMVQEKELIKELEERTSKERGLILEWAPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFSDQPLNSRFVSEVWKLGLDMKDVCDRNVVENMVNYIMVNKKEEFSKSATKMADLASKSVNPDGSSYNNLQDLIQYIRSISP*