Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327550 | XP_013464135.1 | 87.903 | 124 | 14 | 1 | 1 | 124 | 1 | 123 | 9.40e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018220 | Msa0327550 | 0.811653 | 6.287965e-51 | -8.615850e-47 |
| Msa0030730 | Msa0327550 | 0.826063 | 3.332229e-54 | -8.615850e-47 |
| Msa0031720 | Msa0327550 | 0.804800 | 1.815054e-49 | -8.615850e-47 |
| Msa0032120 | Msa0327550 | 0.803425 | 3.507719e-49 | -8.615850e-47 |
| Msa0043680 | Msa0327550 | 0.818032 | 2.421779e-52 | -8.615850e-47 |
| Msa0044810 | Msa0327550 | 0.820341 | 7.221338e-53 | -8.615850e-47 |
| Msa0073820 | Msa0327550 | 0.849378 | 3.361425e-60 | -8.615850e-47 |
| Msa0078090 | Msa0327550 | 0.809763 | 1.611502e-50 | -8.615850e-47 |
| Msa0084680 | Msa0327550 | 0.813223 | 2.853348e-51 | -8.615850e-47 |
| Msa0091550 | Msa0327550 | 0.822654 | 2.109720e-53 | -8.615850e-47 |
| Msa0092660 | Msa0327550 | 0.852771 | 3.710468e-61 | -8.615850e-47 |
| Msa0092680 | Msa0327550 | 0.824550 | 7.596748e-54 | -8.615850e-47 |
| Msa0092730 | Msa0327550 | 0.851457 | 8.766064e-61 | -8.615850e-47 |
| Msa0097050 | Msa0327550 | 0.807026 | 6.179602e-50 | -8.615850e-47 |
| Msa0135980 | Msa0327550 | 0.834121 | 3.598465e-56 | -8.615850e-47 |
| Msa0137600 | Msa0327550 | 0.844322 | 8.122201e-59 | -8.615850e-47 |
| Msa0139900 | Msa0327550 | 0.822086 | 2.859362e-53 | -8.615850e-47 |
| Msa0141430 | Msa0327550 | 0.803137 | 4.024779e-49 | -8.615850e-47 |
| Msa0141830 | Msa0327550 | 0.802997 | 4.301821e-49 | -8.615850e-47 |
| Msa0150210 | Msa0327550 | 0.803752 | 2.999851e-49 | -8.615850e-47 |
| Msa0165680 | Msa0327550 | 0.810920 | 9.067099e-51 | -8.615850e-47 |
| Msa0171780 | Msa0327550 | 0.822818 | 1.932487e-53 | -8.615850e-47 |
| Msa0171930 | Msa0327550 | 0.822254 | 2.613838e-53 | -8.615850e-47 |
| Msa0185700 | Msa0327550 | 0.803011 | 4.273546e-49 | -8.615850e-47 |
| Msa0207000 | Msa0327550 | 0.805227 | 1.477739e-49 | -8.615850e-47 |
| Msa0223280 | Msa0327550 | 0.802163 | 6.392612e-49 | -8.615850e-47 |
| Msa0223390 | Msa0327550 | 0.814439 | 1.540075e-51 | -8.615850e-47 |
| Msa0227020 | Msa0327550 | -0.838004 | 3.720626e-57 | -8.615850e-47 |
| Msa0239660 | Msa0327550 | 0.802776 | 4.778176e-49 | -8.615850e-47 |
| Msa0246690 | Msa0327550 | 0.820798 | 5.669299e-53 | -8.615850e-47 |
| Msa0247310 | Msa0327550 | 0.808180 | 3.515707e-50 | -8.615850e-47 |
| Msa0255990 | Msa0327550 | 0.805635 | 1.213528e-49 | -8.615850e-47 |
| Msa0257130 | Msa0327550 | 0.801263 | 9.780021e-49 | -8.615850e-47 |
| Msa0259980 | Msa0327550 | 0.800236 | 1.584307e-48 | -8.615850e-47 |
| Msa0280140 | Msa0327550 | 0.812707 | 3.702155e-51 | -8.615850e-47 |
| Msa0285740 | Msa0327550 | 0.820913 | 5.333485e-53 | -8.615850e-47 |
| Msa0289780 | Msa0327550 | 0.994668 | 3.563973e-209 | -8.615850e-47 |
| Msa0298970 | Msa0327550 | 0.812142 | 4.920406e-51 | -8.615850e-47 |
| Msa0305340 | Msa0327550 | -0.815662 | 8.242222e-52 | -8.615850e-47 |
| Msa0317260 | Msa0327550 | 0.812958 | 3.262665e-51 | -8.615850e-47 |
| Msa0323990 | Msa0327550 | 0.853831 | 1.842239e-61 | -8.615850e-47 |
| Msa0327550 | Msa0339860 | 0.813585 | 2.376077e-51 | -8.615850e-47 |
| Msa0327550 | Msa0341460 | -0.850818 | 1.327400e-60 | -8.615850e-47 |
| Msa0327550 | Msa0367370 | 0.855942 | 4.495965e-62 | -8.615850e-47 |
| Msa0327550 | Msa0370890 | 0.810081 | 1.376158e-50 | -8.615850e-47 |
| Msa0327550 | Msa0374070 | 0.806067 | 9.846085e-50 | -8.615850e-47 |
| Msa0327550 | Msa0382500 | 0.803337 | 3.658386e-49 | -8.615850e-47 |
| Msa0327550 | Msa0386270 | 0.807182 | 5.727439e-50 | -8.615850e-47 |
| Msa0327550 | Msa0423250 | 0.805803 | 1.119113e-49 | -8.615850e-47 |
| Msa0327550 | Msa0428510 | -0.824340 | 8.513606e-54 | -8.615850e-47 |
| Msa0327550 | Msa0432680 | 0.808871 | 2.503083e-50 | -8.615850e-47 |
| Msa0327550 | Msa0436090 | 0.824440 | 8.061503e-54 | -8.615850e-47 |
| Msa0327550 | Msa0469390 | 0.801756 | 7.747907e-49 | -8.615850e-47 |
| Msa0327550 | Msa0506760 | 0.830020 | 3.715462e-55 | -8.615850e-47 |
| Msa0327550 | Msa0511870 | 0.811909 | 5.531139e-51 | -8.615850e-47 |
| Msa0327550 | Msa0515090 | 0.825751 | 3.950607e-54 | -8.615850e-47 |
| Msa0327550 | Msa0524230 | 0.800353 | 1.499655e-48 | -8.615850e-47 |
| Msa0327550 | Msa0532840 | 0.823331 | 1.467266e-53 | -8.615850e-47 |
| Msa0327550 | Msa0533010 | 0.813789 | 2.142976e-51 | -8.615850e-47 |
| Msa0327550 | Msa0538570 | 0.824145 | 9.457968e-54 | -8.615850e-47 |
| Msa0327550 | Msa0550110 | 0.801972 | 6.997666e-49 | -8.615850e-47 |
| Msa0327550 | Msa0561510 | 0.824354 | 8.445662e-54 | -8.615850e-47 |
| Msa0327550 | Msa0563530 | 0.821566 | 3.771428e-53 | -8.615850e-47 |
| Msa0327550 | Msa0567290 | 0.819469 | 1.142740e-52 | -8.615850e-47 |
| Msa0327550 | Msa0578900 | 0.824036 | 1.003362e-53 | -8.615850e-47 |
| Msa0327550 | Msa0594390 | 0.816836 | 4.503753e-52 | -8.615850e-47 |
| Msa0327550 | Msa0605620 | 0.800457 | 1.428211e-48 | -8.615850e-47 |
| Msa0327550 | Msa0607480 | 0.804438 | 2.160602e-49 | -8.615850e-47 |
| Msa0327550 | Msa0607600 | -0.807773 | 4.291803e-50 | -8.615850e-47 |
| Msa0327550 | Msa0610860 | 0.822974 | 1.777084e-53 | -8.615850e-47 |
| Msa0327550 | Msa0619330 | 0.802748 | 4.843248e-49 | -8.615850e-47 |
| Msa0327550 | Msa0620020 | 0.806764 | 7.022042e-50 | -8.615850e-47 |
| Msa0327550 | Msa0629290 | 0.822135 | 2.784456e-53 | -8.615850e-47 |
| Msa0327550 | Msa0634270 | 0.804092 | 2.549504e-49 | -8.615850e-47 |
| Msa0327550 | Msa0639370 | 0.831753 | 1.396295e-55 | -8.615850e-47 |
| Msa0327550 | Msa0651350 | 0.815098 | 1.099952e-51 | -8.615850e-47 |
| Msa0327550 | Msa0659800 | -0.810394 | 1.178399e-50 | -8.615850e-47 |
| Msa0327550 | Msa0661470 | 0.828440 | 8.978391e-55 | -8.615850e-47 |
| Msa0327550 | Msa0667970 | 0.820887 | 5.408084e-53 | -8.615850e-47 |
| Msa0327550 | Msa0681890 | 0.800390 | 1.474042e-48 | -8.615850e-47 |
| Msa0327550 | Msa0682460 | 0.831672 | 1.461685e-55 | -8.615850e-47 |
| Msa0327550 | Msa0685540 | 0.803115 | 4.067189e-49 | -8.615850e-47 |
| Msa0327550 | Msa0687860 | -0.808992 | 2.358322e-50 | -8.615850e-47 |
| Msa0327550 | Msa0690170 | 0.818393 | 2.007082e-52 | -8.615850e-47 |
| Msa0327550 | Msa0703720 | 0.832488 | 9.187197e-56 | -8.615850e-47 |
| Msa0327550 | Msa0703760 | 0.865759 | 4.677480e-65 | -8.615850e-47 |
| Msa0327550 | Msa0709760 | 0.809683 | 1.676064e-50 | -8.615850e-47 |
| Msa0327550 | Msa0717920 | -0.800371 | 1.487360e-48 | -8.615850e-47 |
| Msa0327550 | Msa0720270 | 0.801380 | 9.255658e-49 | -8.615850e-47 |
| Msa0327550 | Msa0730180 | 0.802876 | 4.557014e-49 | -8.615850e-47 |
| Msa0327550 | Msa0746600 | 0.828213 | 1.018627e-54 | -8.615850e-47 |
| Msa0327550 | Msa0761790 | 0.820501 | 6.635181e-53 | -8.615850e-47 |
| Msa0327550 | Msa0769830 | 0.808937 | 2.422880e-50 | -8.615850e-47 |
| Msa0327550 | Msa0770430 | 0.800978 | 1.118034e-48 | -8.615850e-47 |
| Msa0327550 | Msa0790180 | 0.800286 | 1.547829e-48 | -8.615850e-47 |
| Msa0327550 | Msa0802210 | 0.818768 | 1.649609e-52 | -8.615850e-47 |
| Msa0327550 | Msa0804110 | 0.816370 | 5.725881e-52 | -8.615850e-47 |
| Msa0327550 | Msa0805940 | 0.805899 | 1.068460e-49 | -8.615850e-47 |
| Msa0327550 | Msa0813320 | -0.825682 | 4.102929e-54 | -8.615850e-47 |
| Msa0327550 | Msa0842220 | 0.800816 | 1.206898e-48 | -8.615850e-47 |
| Msa0327550 | Msa0843690 | 0.838945 | 2.126217e-57 | -8.615850e-47 |
| Msa0327550 | Msa0848760 | 0.802213 | 6.240561e-49 | -8.615850e-47 |
| Msa0327550 | Msa0874760 | 0.809025 | 2.319973e-50 | -8.615850e-47 |
| Msa0327550 | Msa0882700 | 0.805004 | 1.645306e-49 | -8.615850e-47 |
| Msa0327550 | Msa0925160 | 0.821604 | 3.696934e-53 | -8.615850e-47 |
| Msa0327550 | Msa0930330 | 0.803817 | 2.908565e-49 | -8.615850e-47 |
| Msa0327550 | Msa0931480 | 0.821747 | 3.425886e-53 | -8.615850e-47 |
| Msa0327550 | Msa0955260 | 0.822740 | 2.014755e-53 | -8.615850e-47 |
| Msa0327550 | Msa0972730 | 0.808937 | 2.423210e-50 | -8.615850e-47 |
| Msa0327550 | Msa0990520 | 0.801303 | 9.596427e-49 | -8.615850e-47 |
| Msa0327550 | Msa1004500 | 0.815665 | 8.229869e-52 | -8.615850e-47 |
| Msa0327550 | Msa1004520 | 0.803198 | 3.909464e-49 | -8.615850e-47 |
| Msa0327550 | Msa1009790 | 0.807645 | 4.568248e-50 | -8.615850e-47 |
| Msa0327550 | Msa1027790 | 0.817956 | 2.519740e-52 | -8.615850e-47 |
| Msa0327550 | Msa1028460 | 0.814119 | 1.812020e-51 | -8.615850e-47 |
| Msa0327550 | Msa1033960 | 0.800453 | 1.430966e-48 | -8.615850e-47 |
| Msa0327550 | Msa1045880 | 0.807766 | 4.305566e-50 | -8.615850e-47 |
| Msa0327550 | Msa1046870 | 0.815610 | 8.464192e-52 | -8.615850e-47 |
| Msa0327550 | Msa1051300 | 0.811131 | 8.161512e-51 | -8.615850e-47 |
| Msa0327550 | Msa1061180 | 0.813872 | 2.054167e-51 | -8.615850e-47 |
| Msa0327550 | Msa1067430 | 0.802786 | 4.754492e-49 | -8.615850e-47 |
| Msa0327550 | Msa1072080 | 0.800852 | 1.186618e-48 | -8.615850e-47 |
| Msa0327550 | Msa1080620 | 0.833174 | 6.203718e-56 | -8.615850e-47 |
| Msa0327550 | Msa1080690 | 0.828952 | 6.753107e-55 | -8.615850e-47 |
| Msa0327550 | Msa1084490 | 0.818222 | 2.193419e-52 | -8.615850e-47 |
| Msa0327550 | Msa1097850 | 0.810245 | 1.268721e-50 | -8.615850e-47 |
| Msa0327550 | Msa1105290 | 0.813829 | 2.099768e-51 | -8.615850e-47 |
| Msa0327550 | Msa1106560 | 0.817126 | 3.875848e-52 | -8.615850e-47 |
| Msa0327550 | Msa1106580 | 0.816433 | 5.543096e-52 | -8.615850e-47 |
| Msa0327550 | Msa1112610 | 0.810938 | 8.988286e-51 | -8.615850e-47 |
| Msa0327550 | Msa1125780 | 0.818506 | 1.892064e-52 | -8.615850e-47 |
| Msa0327550 | Msa1125950 | 0.822843 | 1.906559e-53 | -8.615850e-47 |
| Msa0327550 | Msa1126310 | 0.835642 | 1.489853e-56 | -8.615850e-47 |
| Msa0327550 | Msa1127510 | 0.803977 | 2.694784e-49 | -8.615850e-47 |
| Msa0327550 | Msa1129560 | 0.812366 | 4.395587e-51 | -8.615850e-47 |
| Msa0327550 | Msa1129720 | 0.834862 | 2.344878e-56 | -8.615850e-47 |
| Msa0327550 | Msa1134400 | 0.812259 | 4.638542e-51 | -8.615850e-47 |
| Msa0327550 | Msa1159100 | 0.803996 | 2.669427e-49 | -8.615850e-47 |
| Msa0327550 | Msa1167160 | 0.844531 | 7.138167e-59 | -8.615850e-47 |
| Msa0327550 | Msa1171340 | 0.820125 | 8.089364e-53 | -8.615850e-47 |
| Msa0327550 | Msa1175750 | 0.802017 | 6.847778e-49 | -8.615850e-47 |
| Msa0327550 | Msa1183390 | 0.852771 | 3.710585e-61 | -8.615850e-47 |
| Msa0327550 | Msa1190910 | 0.815128 | 1.083393e-51 | -8.615850e-47 |
| Msa0327550 | Msa1194330 | 0.806025 | 1.004932e-49 | -8.615850e-47 |
| Msa0327550 | Msa1197110 | 0.842972 | 1.865487e-58 | -8.615850e-47 |
| Msa0327550 | Msa1209150 | 0.804441 | 2.156687e-49 | -8.615850e-47 |
| Msa0327550 | Msa1210770 | 0.800231 | 1.588082e-48 | -8.615850e-47 |
| Msa0327550 | Msa1219250 | 0.815841 | 7.518218e-52 | -8.615850e-47 |
| Msa0327550 | Msa1229050 | 0.816766 | 4.669122e-52 | -8.615850e-47 |
| Msa0327550 | Msa1235890 | 0.808039 | 3.767381e-50 | -8.615850e-47 |
| Msa0327550 | Msa1259470 | 0.801551 | 8.536810e-49 | -8.615850e-47 |
| Msa0327550 | Msa1271490 | 0.810952 | 8.923199e-51 | -8.615850e-47 |
| Msa0327550 | Msa1271510 | 0.842599 | 2.343003e-58 | -8.615850e-47 |
| Msa0327550 | Msa1271600 | 0.800371 | 1.487360e-48 | -8.615850e-47 |
| Msa0327550 | Msa1280120 | 0.811256 | 7.666281e-51 | -8.615850e-47 |
| Msa0327550 | Msa1293530 | 0.805405 | 1.356417e-49 | -8.615850e-47 |
| Msa0327550 | Msa1303750 | 0.806684 | 7.297466e-50 | -8.615850e-47 |
| Msa0327550 | Msa1303810 | 0.807778 | 4.281235e-50 | -8.615850e-47 |
| Msa0327550 | Msa1305520 | 0.844720 | 6.347218e-59 | -8.615850e-47 |
| Msa0327550 | Msa1307370 | 0.808047 | 3.751659e-50 | -8.615850e-47 |
| Msa0327550 | Msa1309360 | 0.844420 | 7.646717e-59 | -8.615850e-47 |
| Msa0327550 | Msa1312730 | 0.806436 | 8.232589e-50 | -8.615850e-47 |
| Msa0327550 | Msa1315980 | 0.812118 | 4.978834e-51 | -8.615850e-47 |
| Msa0327550 | Msa1337090 | 0.806827 | 6.810216e-50 | -8.615850e-47 |
| Msa0327550 | Msa1354040 | 0.819546 | 1.097534e-52 | -8.615850e-47 |
| Msa0327550 | Msa1363080 | 0.800087 | 1.698538e-48 | -8.615850e-47 |
| Msa0327550 | Msa1365870 | 0.811517 | 6.729683e-51 | -8.615850e-47 |
| Msa0327550 | Msa1385900 | 0.804019 | 2.640304e-49 | -8.615850e-47 |
| Msa0327550 | Msa1398480 | 0.812576 | 3.954653e-51 | -8.615850e-47 |
| Msa0327550 | Msa1398840 | 0.812178 | 4.832169e-51 | -8.615850e-47 |
| Msa0327550 | Msa1404370 | 0.816353 | 5.777981e-52 | -8.615850e-47 |
| Msa0327550 | Msa1407710 | 0.826393 | 2.779816e-54 | -8.615850e-47 |
| Msa0327550 | Msa1412520 | 0.834873 | 2.330152e-56 | -8.615850e-47 |
| Msa0327550 | Msa1418200 | 0.802475 | 5.511567e-49 | -8.615850e-47 |
| Msa0327550 | Msa1435580 | 0.802703 | 4.946767e-49 | -8.615850e-47 |
| Msa0327550 | Msa1438360 | 0.826155 | 3.167479e-54 | -8.615850e-47 |
| Msa0327550 | Msa1439670 | 0.800209 | 1.604432e-48 | -8.615850e-47 |
| Msa0327550 | Msa1447230 | 0.803280 | 3.758601e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327550 | MtrunA17_Chr2g0308801 | 87.903 | 124 | 14 | 1 | 1 | 124 | 1 | 123 | 8.64e-72 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCCTCTCCTTACAATTT+TGG | 0.174141 | 2_4:-39319640 | Msa0327550:CDS |
| AGATCACAATACCTCAAATT+AGG | 0.206664 | 2_4:-39320636 | Msa0327550:CDS |
| TTCCTTGTTTGTTGGGTCAT+TGG | 0.234460 | 2_4:-39319600 | Msa0327550:CDS |
| ACAAACAAACATGTTTATTT+CGG | 0.303916 | 2_4:+39319531 | None:intergenic |
| TCCTTGTTTGTTGGGTCATT+GGG | 0.315553 | 2_4:-39319599 | Msa0327550:CDS |
| TGGGTCATTGGGTCCGTTGT+AGG | 0.319973 | 2_4:-39319588 | Msa0327550:CDS |
| CTTTACATCTGATCCTTCAT+TGG | 0.334627 | 2_4:+39319686 | None:intergenic |
| GGAAACTGGCAATGCTTCTC+AGG | 0.356908 | 2_4:-39319664 | Msa0327550:CDS |
| TGATATCAAATGGCGTCTAT+TGG | 0.365166 | 2_4:-39320687 | Msa0327550:exon |
| TCAACTTCTCTCCCACCTTC+AGG | 0.366725 | 2_4:-39320575 | Msa0327550:intron |
| TAATATAAGTATGTTGTAGA+AGG | 0.370488 | 2_4:-39320733 | Msa0327550:five_prime_UTR |
| GGATCAGATGTAAAGGAAAC+TGG | 0.407614 | 2_4:-39319678 | Msa0327550:CDS |
| GATCACAATACCTCAAATTA+GGG | 0.410926 | 2_4:-39320635 | Msa0327550:CDS |
| GTGGCAATGGGAAGGAATTG+AGG | 0.459199 | 2_4:+39320600 | None:intergenic |
| GGGTCATTGGGTCCGTTGTA+GGG | 0.469514 | 2_4:-39319587 | Msa0327550:CDS |
| GAGAAGTTGAGTGTGGCAAT+GGG | 0.472153 | 2_4:+39320588 | None:intergenic |
| AGAGTCCAGCCAAAATTGTA+AGG | 0.489275 | 2_4:+39319631 | None:intergenic |
| AATATAAGTATGTTGTAGAA+GGG | 0.508798 | 2_4:-39320732 | Msa0327550:five_prime_UTR |
| AGAGAAGTTGAGTGTGGCAA+TGG | 0.517362 | 2_4:+39320587 | None:intergenic |
| CAATGAAGGATCAGATGTAA+AGG | 0.522407 | 2_4:-39319685 | Msa0327550:CDS |
| AGACAGACAGTGATATCAAA+TGG | 0.522799 | 2_4:-39320697 | Msa0327550:exon |
| TTGAAGGTAACCCTAATTTG+AGG | 0.528710 | 2_4:+39320625 | None:intergenic |
| TGGATTCTCCTCACTGTCAC+CGG | 0.535382 | 2_4:-39320667 | Msa0327550:CDS |
| AAACATGTTTATTTCGGAGA+GGG | 0.543120 | 2_4:+39319537 | None:intergenic |
| GGTGGAAAATCATCCAATGA+AGG | 0.556794 | 2_4:-39319699 | Msa0327550:CDS |
| AGTTGAGTGTGGCAATGGGA+AGG | 0.564752 | 2_4:+39320592 | None:intergenic |
| AATGTATTATCCAGATGCAT+AGG | 0.565409 | 2_4:-39319786 | Msa0327550:intron |
| GCCAAAATTGTAAGGAGAGG+AGG | 0.568215 | 2_4:+39319639 | None:intergenic |
| AAAGATAAGGACTAATACAA+TGG | 0.575529 | 2_4:+39319480 | None:intergenic |
| ACCCAATGACCCAACAAACA+AGG | 0.579860 | 2_4:+39319598 | None:intergenic |
| TGGACTTGATGGTATTTGAG+TGG | 0.587675 | 2_4:-39319434 | Msa0327550:three_prime_UTR |
| ACAAACCCCAACTCCAGTGG+TGG | 0.594457 | 2_4:-39319717 | Msa0327550:CDS |
| ACTTGATGGTATTTGAGTGG+TGG | 0.598807 | 2_4:-39319431 | Msa0327550:three_prime_UTR |
| GAAACTGGCAATGCTTCTCA+GGG | 0.603720 | 2_4:-39319663 | Msa0327550:CDS |
| TCATTGGGTCCGTTGTAGGG+TGG | 0.604108 | 2_4:-39319584 | Msa0327550:CDS |
| ATATAAGTATGTTGTAGAAG+GGG | 0.611098 | 2_4:-39320731 | Msa0327550:five_prime_UTR |
| ATGGTATTTGAGTGGTGGAA+AGG | 0.623749 | 2_4:-39319426 | Msa0327550:three_prime_UTR |
| CCAGCCAAAATTGTAAGGAG+AGG | 0.629021 | 2_4:+39319636 | None:intergenic |
| GGTGGGAGAGAAGTTGAGTG+TGG | 0.637036 | 2_4:+39320581 | None:intergenic |
| CAAACATGTTTATTTCGGAG+AGG | 0.642713 | 2_4:+39319536 | None:intergenic |
| TATTGTGATCTGACTGTCGC+CGG | 0.646250 | 2_4:+39320648 | None:intergenic |
| GCATGAACCAGACCTGAAGG+TGG | 0.646924 | 2_4:+39320563 | None:intergenic |
| CATGAACCAGACCTGAAGGT+GGG | 0.649807 | 2_4:+39320564 | None:intergenic |
| GCTACAAACCCCAACTCCAG+TGG | 0.660305 | 2_4:-39319720 | Msa0327550:CDS |
| ACTTATCAACCACCCTACAA+CGG | 0.666808 | 2_4:+39319575 | None:intergenic |
| GACTGTCGCCGGTGACAGTG+AGG | 0.666827 | 2_4:+39320659 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTAAAATTTAATGATA+AGG | + | chr2_4:39320673-39320692 | None:intergenic | 10.0% |
| !!! | TTTTGTAAAATTTAATGATA+AGG | + | chr2_4:39320673-39320692 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAGTAAAGCA+AGG | + | chr2_4:39319484-39319503 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAGTAAAGCA+AGG | + | chr2_4:39319484-39319503 | None:intergenic | 15.0% |
| !! | TAATATAAGTATGTTGTAGA+AGG | - | chr2_4:39319284-39319303 | Msa0327550:three_prime_UTR | 20.0% |
| !! | AATATAAGTATGTTGTAGAA+GGG | - | chr2_4:39319285-39319304 | Msa0327550:three_prime_UTR | 20.0% |
| !! | TATTACTACTTAAAAAACCT+TGG | + | chr2_4:39319549-39319568 | None:intergenic | 20.0% |
| !!! | TGAATTGATTTTGAAATGTT+TGG | - | chr2_4:39319673-39319692 | Msa0327550:CDS | 20.0% |
| !!! | TTTTCTAGAATTAGATGAAA+AGG | - | chr2_4:39319863-39319882 | Msa0327550:intron | 20.0% |
| !!! | TTTCTAGAATTAGATGAAAA+GGG | - | chr2_4:39319864-39319883 | Msa0327550:intron | 20.0% |
| !!! | TGAAATTTTGTTTATGTCAT+TGG | + | chr2_4:39319940-39319959 | None:intergenic | 20.0% |
| !!! | TAACATGTTTGTTTTGATTA+AGG | + | chr2_4:39320085-39320104 | None:intergenic | 20.0% |
| !! | ACAAACAAACATGTTTATTT+CGG | + | chr2_4:39320489-39320508 | None:intergenic | 20.0% |
| !!! | CAAAAATTCTTTATTTCGTT+CGG | - | chr2_4:39320688-39320707 | Msa0327550:exon | 20.0% |
| !! | ACATACTTATATTACATTTG+AGG | + | chr2_4:39319278-39319297 | None:intergenic | 20.0% |
| !! | TAATATAAGTATGTTGTAGA+AGG | - | chr2_4:39319284-39319303 | Msa0327550:three_prime_UTR | 20.0% |
| !! | AATATAAGTATGTTGTAGAA+GGG | - | chr2_4:39319285-39319304 | Msa0327550:three_prime_UTR | 20.0% |
| !! | TATTACTACTTAAAAAACCT+TGG | + | chr2_4:39319549-39319568 | None:intergenic | 20.0% |
| !!! | TGAATTGATTTTGAAATGTT+TGG | - | chr2_4:39319673-39319692 | Msa0327550:CDS | 20.0% |
| !!! | TTTTCTAGAATTAGATGAAA+AGG | - | chr2_4:39319863-39319882 | Msa0327550:intron | 20.0% |
| !!! | TTTCTAGAATTAGATGAAAA+GGG | - | chr2_4:39319864-39319883 | Msa0327550:intron | 20.0% |
| !!! | TGAAATTTTGTTTATGTCAT+TGG | + | chr2_4:39319940-39319959 | None:intergenic | 20.0% |
| !!! | TAACATGTTTGTTTTGATTA+AGG | + | chr2_4:39320085-39320104 | None:intergenic | 20.0% |
| !! | ACAAACAAACATGTTTATTT+CGG | + | chr2_4:39320489-39320508 | None:intergenic | 20.0% |
| !!! | CAAAAATTCTTTATTTCGTT+CGG | - | chr2_4:39320688-39320707 | Msa0327550:exon | 20.0% |
| ! | ATATAAGTATGTTGTAGAAG+GGG | - | chr2_4:39319286-39319305 | Msa0327550:three_prime_UTR | 25.0% |
| !!! | GCAAATTTTTGTTTCTCTAT+TGG | - | chr2_4:39319623-39319642 | Msa0327550:CDS | 25.0% |
| !!! | AATTTTTGTTTCTCTATTGG+AGG | - | chr2_4:39319626-39319645 | Msa0327550:CDS | 25.0% |
| !! | AAGTCAAAAATTGTAGCTTT+TGG | - | chr2_4:39319745-39319764 | Msa0327550:CDS | 25.0% |
| ! | TTGATTGAACACTAAATTCA+GGG | + | chr2_4:39319790-39319809 | None:intergenic | 25.0% |
| !!! | TTCTAGAATTAGATGAAAAG+GGG | - | chr2_4:39319865-39319884 | Msa0327550:intron | 25.0% |
| !!! | ATGTTTGTTTTGATTAAGGA+GGG | + | chr2_4:39320081-39320100 | None:intergenic | 25.0% |
| ! | AAAGATAAGGACTAATACAA+TGG | + | chr2_4:39320540-39320559 | None:intergenic | 25.0% |
| !!! | TTAGTCCTTATCTTTTTTCT+TGG | - | chr2_4:39320545-39320564 | Msa0327550:intron | 25.0% |
| ! | ATTAGCCAAGAAAAAAGATA+AGG | + | chr2_4:39320553-39320572 | None:intergenic | 25.0% |
| ! | ATATAAGTATGTTGTAGAAG+GGG | - | chr2_4:39319286-39319305 | Msa0327550:three_prime_UTR | 25.0% |
| !!! | GCAAATTTTTGTTTCTCTAT+TGG | - | chr2_4:39319623-39319642 | Msa0327550:CDS | 25.0% |
| !!! | AATTTTTGTTTCTCTATTGG+AGG | - | chr2_4:39319626-39319645 | Msa0327550:CDS | 25.0% |
| !! | AAGTCAAAAATTGTAGCTTT+TGG | - | chr2_4:39319745-39319764 | Msa0327550:CDS | 25.0% |
| ! | TTGATTGAACACTAAATTCA+GGG | + | chr2_4:39319790-39319809 | None:intergenic | 25.0% |
| !!! | TTCTAGAATTAGATGAAAAG+GGG | - | chr2_4:39319865-39319884 | Msa0327550:intron | 25.0% |
| !!! | ATGTTTGTTTTGATTAAGGA+GGG | + | chr2_4:39320081-39320100 | None:intergenic | 25.0% |
| ! | AAAGATAAGGACTAATACAA+TGG | + | chr2_4:39320540-39320559 | None:intergenic | 25.0% |
| !!! | TTAGTCCTTATCTTTTTTCT+TGG | - | chr2_4:39320545-39320564 | Msa0327550:intron | 25.0% |
| ! | ATTAGCCAAGAAAAAAGATA+AGG | + | chr2_4:39320553-39320572 | None:intergenic | 25.0% |
| AGATCACAATACCTCAAATT+AGG | - | chr2_4:39319381-39319400 | Msa0327550:three_prime_UTR | 30.0% | |
| GATCACAATACCTCAAATTA+GGG | - | chr2_4:39319382-39319401 | Msa0327550:three_prime_UTR | 30.0% | |
| AAACCTTGGCTACAATAATT+GGG | + | chr2_4:39319535-39319554 | None:intergenic | 30.0% | |
| AAAACCTTGGCTACAATAAT+TGG | + | chr2_4:39319536-39319555 | None:intergenic | 30.0% | |
| GTTGATTGAACACTAAATTC+AGG | + | chr2_4:39319791-39319810 | None:intergenic | 30.0% | |
| ! | TCTAGAATTAGATGAAAAGG+GGG | - | chr2_4:39319866-39319885 | Msa0327550:intron | 30.0% |
| TTAGTCATCAAATGTAGTGT+TGG | - | chr2_4:39319905-39319924 | Msa0327550:intron | 30.0% | |
| !! | GAATTGATTTTCGAGATTTC+TGG | + | chr2_4:39319971-39319990 | None:intergenic | 30.0% |
| TCATCTATGAAATGATTCCT+AGG | - | chr2_4:39319989-39320008 | Msa0327550:intron | 30.0% | |
| AAATAAGTATCATGCATCCT+AGG | + | chr2_4:39320009-39320028 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGATTAAGGAG+GGG | + | chr2_4:39320080-39320099 | None:intergenic | 30.0% |
| !!! | CATGTTTGTTTTGATTAAGG+AGG | + | chr2_4:39320082-39320101 | None:intergenic | 30.0% |
| AAACATGTTAGTTCATTGAG+TGG | - | chr2_4:39320095-39320114 | Msa0327550:intron | 30.0% | |
| AATGTATTATCCAGATGCAT+AGG | - | chr2_4:39320231-39320250 | Msa0327550:intron | 30.0% | |
| !! | TTGTGTTTTTCCTTGTTTGT+TGG | - | chr2_4:39320409-39320428 | Msa0327550:intron | 30.0% |
| !! | TGTGTTTTTCCTTGTTTGTT+GGG | - | chr2_4:39320410-39320429 | Msa0327550:intron | 30.0% |
| AAACATGTTTATTTCGGAGA+GGG | + | chr2_4:39320483-39320502 | None:intergenic | 30.0% | |
| TGAGAAAAAAGCAGGATAAA+GGG | - | chr2_4:39320620-39320639 | Msa0327550:CDS | 30.0% | |
| AGATCACAATACCTCAAATT+AGG | - | chr2_4:39319381-39319400 | Msa0327550:three_prime_UTR | 30.0% | |
| GATCACAATACCTCAAATTA+GGG | - | chr2_4:39319382-39319401 | Msa0327550:three_prime_UTR | 30.0% | |
| AAACCTTGGCTACAATAATT+GGG | + | chr2_4:39319535-39319554 | None:intergenic | 30.0% | |
| AAAACCTTGGCTACAATAAT+TGG | + | chr2_4:39319536-39319555 | None:intergenic | 30.0% | |
| GTTGATTGAACACTAAATTC+AGG | + | chr2_4:39319791-39319810 | None:intergenic | 30.0% | |
| ! | TCTAGAATTAGATGAAAAGG+GGG | - | chr2_4:39319866-39319885 | Msa0327550:intron | 30.0% |
| TTAGTCATCAAATGTAGTGT+TGG | - | chr2_4:39319905-39319924 | Msa0327550:intron | 30.0% | |
| !! | GAATTGATTTTCGAGATTTC+TGG | + | chr2_4:39319971-39319990 | None:intergenic | 30.0% |
| TCATCTATGAAATGATTCCT+AGG | - | chr2_4:39319989-39320008 | Msa0327550:intron | 30.0% | |
| AAATAAGTATCATGCATCCT+AGG | + | chr2_4:39320009-39320028 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGATTAAGGAG+GGG | + | chr2_4:39320080-39320099 | None:intergenic | 30.0% |
| !!! | CATGTTTGTTTTGATTAAGG+AGG | + | chr2_4:39320082-39320101 | None:intergenic | 30.0% |
| AAACATGTTAGTTCATTGAG+TGG | - | chr2_4:39320095-39320114 | Msa0327550:intron | 30.0% | |
| AATGTATTATCCAGATGCAT+AGG | - | chr2_4:39320231-39320250 | Msa0327550:intron | 30.0% | |
| !! | TTGTGTTTTTCCTTGTTTGT+TGG | - | chr2_4:39320409-39320428 | Msa0327550:intron | 30.0% |
| !! | TGTGTTTTTCCTTGTTTGTT+GGG | - | chr2_4:39320410-39320429 | Msa0327550:intron | 30.0% |
| AAACATGTTTATTTCGGAGA+GGG | + | chr2_4:39320483-39320502 | None:intergenic | 30.0% | |
| TGAGAAAAAAGCAGGATAAA+GGG | - | chr2_4:39320620-39320639 | Msa0327550:CDS | 30.0% | |
| AGACAGACAGTGATATCAAA+TGG | - | chr2_4:39319320-39319339 | Msa0327550:three_prime_UTR | 35.0% | |
| TGATATCAAATGGCGTCTAT+TGG | - | chr2_4:39319330-39319349 | Msa0327550:three_prime_UTR | 35.0% | |
| TTGAAGGTAACCCTAATTTG+AGG | + | chr2_4:39319395-39319414 | None:intergenic | 35.0% | |
| CTTTACATCTGATCCTTCAT+TGG | + | chr2_4:39320334-39320353 | None:intergenic | 35.0% | |
| CAATGAAGGATCAGATGTAA+AGG | - | chr2_4:39320332-39320351 | Msa0327550:intron | 35.0% | |
| CAAACATGTTTATTTCGGAG+AGG | + | chr2_4:39320484-39320503 | None:intergenic | 35.0% | |
| ! | CTTGGCTAATTTTGTGCATT+TGG | - | chr2_4:39320563-39320582 | Msa0327550:intron | 35.0% |
| ! | TTTTGTGCATTTGGACTTGA+TGG | - | chr2_4:39320572-39320591 | Msa0327550:intron | 35.0% |
| GTGAGAAAAAAGCAGGATAA+AGG | - | chr2_4:39320619-39320638 | Msa0327550:CDS | 35.0% | |
| AGACAGACAGTGATATCAAA+TGG | - | chr2_4:39319320-39319339 | Msa0327550:three_prime_UTR | 35.0% | |
| TGATATCAAATGGCGTCTAT+TGG | - | chr2_4:39319330-39319349 | Msa0327550:three_prime_UTR | 35.0% | |
| TTGAAGGTAACCCTAATTTG+AGG | + | chr2_4:39319395-39319414 | None:intergenic | 35.0% | |
| CTTTACATCTGATCCTTCAT+TGG | + | chr2_4:39320334-39320353 | None:intergenic | 35.0% | |
| CAATGAAGGATCAGATGTAA+AGG | - | chr2_4:39320332-39320351 | Msa0327550:intron | 35.0% | |
| CAAACATGTTTATTTCGGAG+AGG | + | chr2_4:39320484-39320503 | None:intergenic | 35.0% | |
| ! | CTTGGCTAATTTTGTGCATT+TGG | - | chr2_4:39320563-39320582 | Msa0327550:intron | 35.0% |
| ! | TTTTGTGCATTTGGACTTGA+TGG | - | chr2_4:39320572-39320591 | Msa0327550:intron | 35.0% |
| GTGAGAAAAAAGCAGGATAA+AGG | - | chr2_4:39320619-39320638 | Msa0327550:CDS | 35.0% | |
| !! | GGAAGGAATTGAGGTTTTGA+AGG | + | chr2_4:39319411-39319430 | None:intergenic | 40.0% |
| TGACCCAATTATTGTAGCCA+AGG | - | chr2_4:39319529-39319548 | Msa0327550:exon | 40.0% | |
| !! | ATTTCTAGAGCCTATGCATC+TGG | + | chr2_4:39320244-39320263 | None:intergenic | 40.0% |
| ! | ATTGGATGATTTTCCACCAC+TGG | + | chr2_4:39320316-39320335 | None:intergenic | 40.0% |
| GGTGGAAAATCATCCAATGA+AGG | - | chr2_4:39320318-39320337 | Msa0327550:intron | 40.0% | |
| GGATCAGATGTAAAGGAAAC+TGG | - | chr2_4:39320339-39320358 | Msa0327550:intron | 40.0% | |
| ! | ACCTCCTCTCCTTACAATTT+TGG | - | chr2_4:39320377-39320396 | Msa0327550:intron | 40.0% |
| AGAGTCCAGCCAAAATTGTA+AGG | + | chr2_4:39320389-39320408 | None:intergenic | 40.0% | |
| ! | TTCCTTGTTTGTTGGGTCAT+TGG | - | chr2_4:39320417-39320436 | Msa0327550:intron | 40.0% |
| ! | TCCTTGTTTGTTGGGTCATT+GGG | - | chr2_4:39320418-39320437 | Msa0327550:intron | 40.0% |
| ACTTATCAACCACCCTACAA+CGG | + | chr2_4:39320445-39320464 | None:intergenic | 40.0% | |
| ! | TGGACTTGATGGTATTTGAG+TGG | - | chr2_4:39320583-39320602 | Msa0327550:CDS | 40.0% |
| ! | ACTTGATGGTATTTGAGTGG+TGG | - | chr2_4:39320586-39320605 | Msa0327550:CDS | 40.0% |
| ! | ATGGTATTTGAGTGGTGGAA+AGG | - | chr2_4:39320591-39320610 | Msa0327550:CDS | 40.0% |
| GGTCAAAGTGAGAAAAAAGC+AGG | - | chr2_4:39320612-39320631 | Msa0327550:CDS | 40.0% | |
| !! | GGAAGGAATTGAGGTTTTGA+AGG | + | chr2_4:39319411-39319430 | None:intergenic | 40.0% |
| TGACCCAATTATTGTAGCCA+AGG | - | chr2_4:39319529-39319548 | Msa0327550:exon | 40.0% | |
| !! | ATTTCTAGAGCCTATGCATC+TGG | + | chr2_4:39320244-39320263 | None:intergenic | 40.0% |
| ! | ATTGGATGATTTTCCACCAC+TGG | + | chr2_4:39320316-39320335 | None:intergenic | 40.0% |
| GGTGGAAAATCATCCAATGA+AGG | - | chr2_4:39320318-39320337 | Msa0327550:intron | 40.0% | |
| GGATCAGATGTAAAGGAAAC+TGG | - | chr2_4:39320339-39320358 | Msa0327550:intron | 40.0% | |
| ! | ACCTCCTCTCCTTACAATTT+TGG | - | chr2_4:39320377-39320396 | Msa0327550:intron | 40.0% |
| AGAGTCCAGCCAAAATTGTA+AGG | + | chr2_4:39320389-39320408 | None:intergenic | 40.0% | |
| ! | TTCCTTGTTTGTTGGGTCAT+TGG | - | chr2_4:39320417-39320436 | Msa0327550:intron | 40.0% |
| ! | TCCTTGTTTGTTGGGTCATT+GGG | - | chr2_4:39320418-39320437 | Msa0327550:intron | 40.0% |
| ACTTATCAACCACCCTACAA+CGG | + | chr2_4:39320445-39320464 | None:intergenic | 40.0% | |
| ! | TGGACTTGATGGTATTTGAG+TGG | - | chr2_4:39320583-39320602 | Msa0327550:CDS | 40.0% |
| ! | ACTTGATGGTATTTGAGTGG+TGG | - | chr2_4:39320586-39320605 | Msa0327550:CDS | 40.0% |
| ! | ATGGTATTTGAGTGGTGGAA+AGG | - | chr2_4:39320591-39320610 | Msa0327550:CDS | 40.0% |
| GGTCAAAGTGAGAAAAAAGC+AGG | - | chr2_4:39320612-39320631 | Msa0327550:CDS | 40.0% | |
| TATTGTGATCTGACTGTCGC+CGG | + | chr2_4:39319372-39319391 | None:intergenic | 45.0% | |
| GAGAAGTTGAGTGTGGCAAT+GGG | + | chr2_4:39319432-39319451 | None:intergenic | 45.0% | |
| AGAGAAGTTGAGTGTGGCAA+TGG | + | chr2_4:39319433-39319452 | None:intergenic | 45.0% | |
| AATGCATGAACCAGACCTGA+AGG | + | chr2_4:39319460-39319479 | None:intergenic | 45.0% | |
| ! | ATTTTCCACCACTGGAGTTG+GGG | + | chr2_4:39320308-39320327 | None:intergenic | 45.0% |
| ! | GATTTTCCACCACTGGAGTT+GGG | + | chr2_4:39320309-39320328 | None:intergenic | 45.0% |
| ! | TGATTTTCCACCACTGGAGT+TGG | + | chr2_4:39320310-39320329 | None:intergenic | 45.0% |
| GAAACTGGCAATGCTTCTCA+GGG | - | chr2_4:39320354-39320373 | Msa0327550:intron | 45.0% | |
| GCCAAAATTGTAAGGAGAGG+AGG | + | chr2_4:39320381-39320400 | None:intergenic | 45.0% | |
| CCAGCCAAAATTGTAAGGAG+AGG | + | chr2_4:39320384-39320403 | None:intergenic | 45.0% | |
| !! | CCTCTCCTTACAATTTTGGC+TGG | - | chr2_4:39320381-39320400 | Msa0327550:intron | 45.0% |
| ACCCAATGACCCAACAAACA+AGG | + | chr2_4:39320422-39320441 | None:intergenic | 45.0% | |
| TATTGTGATCTGACTGTCGC+CGG | + | chr2_4:39319372-39319391 | None:intergenic | 45.0% | |
| GAGAAGTTGAGTGTGGCAAT+GGG | + | chr2_4:39319432-39319451 | None:intergenic | 45.0% | |
| AGAGAAGTTGAGTGTGGCAA+TGG | + | chr2_4:39319433-39319452 | None:intergenic | 45.0% | |
| AATGCATGAACCAGACCTGA+AGG | + | chr2_4:39319460-39319479 | None:intergenic | 45.0% | |
| ! | ATTTTCCACCACTGGAGTTG+GGG | + | chr2_4:39320308-39320327 | None:intergenic | 45.0% |
| ! | GATTTTCCACCACTGGAGTT+GGG | + | chr2_4:39320309-39320328 | None:intergenic | 45.0% |
| ! | TGATTTTCCACCACTGGAGT+TGG | + | chr2_4:39320310-39320329 | None:intergenic | 45.0% |
| GAAACTGGCAATGCTTCTCA+GGG | - | chr2_4:39320354-39320373 | Msa0327550:intron | 45.0% | |
| GCCAAAATTGTAAGGAGAGG+AGG | + | chr2_4:39320381-39320400 | None:intergenic | 45.0% | |
| CCAGCCAAAATTGTAAGGAG+AGG | + | chr2_4:39320384-39320403 | None:intergenic | 45.0% | |
| !! | CCTCTCCTTACAATTTTGGC+TGG | - | chr2_4:39320381-39320400 | Msa0327550:intron | 45.0% |
| ACCCAATGACCCAACAAACA+AGG | + | chr2_4:39320422-39320441 | None:intergenic | 45.0% | |
| !!! | TTTACTTTTTTTTTTTTTTT+AGG | - | chr2_4:39319487-39319506 | Msa0327550:three_prime_UTR | 5.0% |
| !!! | TTTACTTTTTTTTTTTTTTT+AGG | - | chr2_4:39319487-39319506 | Msa0327550:three_prime_UTR | 5.0% |
| TGGATTCTCCTCACTGTCAC+CGG | - | chr2_4:39319350-39319369 | Msa0327550:three_prime_UTR | 50.0% | |
| GTGGCAATGGGAAGGAATTG+AGG | + | chr2_4:39319420-39319439 | None:intergenic | 50.0% | |
| AGTTGAGTGTGGCAATGGGA+AGG | + | chr2_4:39319428-39319447 | None:intergenic | 50.0% | |
| TCAACTTCTCTCCCACCTTC+AGG | - | chr2_4:39319442-39319461 | Msa0327550:three_prime_UTR | 50.0% | |
| CATGAACCAGACCTGAAGGT+GGG | + | chr2_4:39319456-39319475 | None:intergenic | 50.0% | |
| GGAAACTGGCAATGCTTCTC+AGG | - | chr2_4:39320353-39320372 | Msa0327550:intron | 50.0% | |
| TGGATTCTCCTCACTGTCAC+CGG | - | chr2_4:39319350-39319369 | Msa0327550:three_prime_UTR | 50.0% | |
| GTGGCAATGGGAAGGAATTG+AGG | + | chr2_4:39319420-39319439 | None:intergenic | 50.0% | |
| AGTTGAGTGTGGCAATGGGA+AGG | + | chr2_4:39319428-39319447 | None:intergenic | 50.0% | |
| TCAACTTCTCTCCCACCTTC+AGG | - | chr2_4:39319442-39319461 | Msa0327550:three_prime_UTR | 50.0% | |
| CATGAACCAGACCTGAAGGT+GGG | + | chr2_4:39319456-39319475 | None:intergenic | 50.0% | |
| GGAAACTGGCAATGCTTCTC+AGG | - | chr2_4:39320353-39320372 | Msa0327550:intron | 50.0% | |
| GGTGGGAGAGAAGTTGAGTG+TGG | + | chr2_4:39319439-39319458 | None:intergenic | 55.0% | |
| TTCTCTCCCACCTTCAGGTC+TGG | - | chr2_4:39319447-39319466 | Msa0327550:three_prime_UTR | 55.0% | |
| GCATGAACCAGACCTGAAGG+TGG | + | chr2_4:39319457-39319476 | None:intergenic | 55.0% | |
| GCTACAAACCCCAACTCCAG+TGG | - | chr2_4:39320297-39320316 | Msa0327550:intron | 55.0% | |
| ACAAACCCCAACTCCAGTGG+TGG | - | chr2_4:39320300-39320319 | Msa0327550:intron | 55.0% | |
| TGGGTCATTGGGTCCGTTGT+AGG | - | chr2_4:39320429-39320448 | Msa0327550:intron | 55.0% | |
| GGGTCATTGGGTCCGTTGTA+GGG | - | chr2_4:39320430-39320449 | Msa0327550:intron | 55.0% | |
| TCATTGGGTCCGTTGTAGGG+TGG | - | chr2_4:39320433-39320452 | Msa0327550:intron | 55.0% | |
| GGTGGGAGAGAAGTTGAGTG+TGG | + | chr2_4:39319439-39319458 | None:intergenic | 55.0% | |
| TTCTCTCCCACCTTCAGGTC+TGG | - | chr2_4:39319447-39319466 | Msa0327550:three_prime_UTR | 55.0% | |
| GCATGAACCAGACCTGAAGG+TGG | + | chr2_4:39319457-39319476 | None:intergenic | 55.0% | |
| GCTACAAACCCCAACTCCAG+TGG | - | chr2_4:39320297-39320316 | Msa0327550:intron | 55.0% | |
| ACAAACCCCAACTCCAGTGG+TGG | - | chr2_4:39320300-39320319 | Msa0327550:intron | 55.0% | |
| TGGGTCATTGGGTCCGTTGT+AGG | - | chr2_4:39320429-39320448 | Msa0327550:intron | 55.0% | |
| GGGTCATTGGGTCCGTTGTA+GGG | - | chr2_4:39320430-39320449 | Msa0327550:intron | 55.0% | |
| TCATTGGGTCCGTTGTAGGG+TGG | - | chr2_4:39320433-39320452 | Msa0327550:intron | 55.0% | |
| GACTGTCGCCGGTGACAGTG+AGG | + | chr2_4:39319361-39319380 | None:intergenic | 65.0% | |
| GACTGTCGCCGGTGACAGTG+AGG | + | chr2_4:39319361-39319380 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 39319276 | 39320763 | 39319276 | ID=Msa0327550;Name=Msa0327550 |
| chr2_4 | mRNA | 39319276 | 39320763 | 39319276 | ID=Msa0327550-mRNA-1;Parent=Msa0327550;Name=Msa0327550-mRNA-1;_AED=0.01;_eAED=0.01;_QI=63|1|1|1|1|1|2|269|124 |
| chr2_4 | exon | 39319276 | 39319794 | 39319276 | ID=Msa0327550-mRNA-1:exon:11881;Parent=Msa0327550-mRNA-1 |
| chr2_4 | exon | 39320576 | 39320763 | 39320576 | ID=Msa0327550-mRNA-1:exon:11880;Parent=Msa0327550-mRNA-1 |
| chr2_4 | five_prime_UTR | 39320701 | 39320763 | 39320701 | ID=Msa0327550-mRNA-1:five_prime_utr;Parent=Msa0327550-mRNA-1 |
| chr2_4 | CDS | 39320576 | 39320700 | 39320576 | ID=Msa0327550-mRNA-1:cds;Parent=Msa0327550-mRNA-1 |
| chr2_4 | CDS | 39319545 | 39319794 | 39319545 | ID=Msa0327550-mRNA-1:cds;Parent=Msa0327550-mRNA-1 |
| chr2_4 | three_prime_UTR | 39319276 | 39319544 | 39319276 | ID=Msa0327550-mRNA-1:three_prime_utr;Parent=Msa0327550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
