AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1401280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401280 MtrunA17_Chr2g0281791 87.500 656 57 3 3 658 36 666 0.0 1024
Msa1401280 MtrunA17_Chr4g0047791 46.605 324 125 9 4 287 36 351 3.58e-72 248
Msa1401280 MtrunA17_Chr5g0430701 25.234 214 150 3 430 637 197 406 1.32e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401280 AT4G04980.3 62.752 298 101 3 370 658 422 718 3.32e-117 367
Msa1401280 AT4G04980.3 35.165 182 90 6 68 224 1 179 2.40e-19 93.2
Msa1401280 AT4G04980.1 62.963 297 100 3 370 657 578 873 1.65e-115 367
Msa1401280 AT4G04980.1 36.239 218 111 6 32 224 121 335 4.14e-29 124
Msa1401280 AT1G61080.3 65.085 295 92 6 373 656 636 930 2.43e-114 365
Msa1401280 AT1G61080.3 29.964 277 149 5 32 269 94 364 2.24e-26 115
Msa1401280 AT1G61080.6 65.085 295 92 6 373 656 645 939 2.67e-114 365
Msa1401280 AT1G61080.6 29.720 286 147 6 32 269 94 373 4.52e-24 108
Msa1401280 AT1G61080.4 65.085 295 92 6 373 656 637 931 2.79e-114 365
Msa1401280 AT1G61080.4 29.964 277 149 5 32 269 95 365 2.45e-26 115
Msa1401280 AT1G61080.5 65.085 295 92 6 373 656 649 943 5.07e-114 364
Msa1401280 AT1G61080.5 30.686 277 147 6 32 269 107 377 2.46e-26 115
Msa1401280 AT1G61080.2 65.085 295 92 6 373 656 648 942 5.18e-114 364
Msa1401280 AT1G61080.2 30.686 277 147 6 32 269 106 376 2.59e-26 115
Msa1401280 AT1G11070.1 58.763 291 104 3 378 652 449 739 5.04e-103 330
Msa1401280 AT1G11070.4 58.763 291 104 3 378 652 450 740 5.56e-103 330
Msa1401280 AT1G61080.1 57.966 295 80 7 373 656 645 906 3.95e-91 302
Msa1401280 AT1G61080.1 29.720 286 147 6 32 269 94 373 2.93e-24 108
Msa1401280 AT1G11070.5 58.621 174 69 1 378 548 363 536 1.19e-55 199
Msa1401280 AT1G11070.3 58.621 174 69 1 378 548 450 623 3.64e-55 199
Msa1401280 AT1G11070.2 58.621 174 69 1 378 548 450 623 3.64e-55 199
Msa1401280 AT4G04980.2 60.769 130 44 4 370 494 578 705 2.75e-37 148
Msa1401280 AT4G04980.2 36.239 218 111 6 32 224 121 335 2.31e-29 124
Msa1401280 AT1G07120.1 25.221 226 157 4 430 649 165 384 4.96e-15 78.2

Find 149 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAACACAGTTGAGAAAT+TGG 0.160238 tig0022505:+79182 Msa1401280:CDS
TTGGAGCAGGGAGATCTTTA+AGG 0.194552 tig0022505:+79505 Msa1401280:CDS
CATTTCCTTTGTCTTGAAAT+TGG 0.211331 tig0022505:-80126 None:intergenic
GGGCTTTCCAATTTGCATTT+AGG 0.213399 tig0022505:+80893 Msa1401280:CDS
GGCTTTCCAATTTGCATTTA+GGG 0.240517 tig0022505:+80894 Msa1401280:CDS
TAAACCTTTGAAGGCTTCTT+TGG 0.270922 tig0022505:-77981 None:intergenic
GGACTTAGAAGGACAGATTT+TGG 0.271135 tig0022505:-78946 None:intergenic
ATGCATAGCTATGGTTGATT+AGG 0.299945 tig0022505:-80994 None:intergenic
AGCAGCACTCTTCAACAAAT+TGG 0.300415 tig0022505:+80363 Msa1401280:CDS
TATAAACCCTAAATGCAAAT+TGG 0.306553 tig0022505:-80900 None:intergenic
TTTAGGGTTTATACATTTGC+TGG 0.308782 tig0022505:+80910 Msa1401280:CDS
CAAGAAATTGACAAATATTA+AGG 0.309643 tig0022505:+78297 Msa1401280:CDS
TAGGAGTTGCAAACTTTCTT+TGG 0.316518 tig0022505:-78892 None:intergenic
CTGAAAAGATCAACACAATT+AGG 0.318718 tig0022505:+79546 Msa1401280:CDS
TTGCATGGAGTTAGCACTTA+AGG 0.323486 tig0022505:+80714 Msa1401280:CDS
CAAAACAGAATTAGATGCTT+TGG 0.330099 tig0022505:+80585 Msa1401280:CDS
CATACCTAATTGTTGCATAT+TGG 0.331004 tig0022505:-78710 None:intergenic
GATCGAACGTTATTTCAATA+AGG 0.339829 tig0022505:+80450 Msa1401280:CDS
ACATCATTGTAAACCTTTGA+AGG 0.352062 tig0022505:-77990 None:intergenic
GGAAGTGGAGGAGGAGGTGG+TGG 0.364759 tig0022505:-79228 None:intergenic
ACTCTCAAGGGAAAAGTAGA+AGG 0.371196 tig0022505:+79582 Msa1401280:CDS
TCAATGGAGTGGTCATTTAT+AGG 0.372738 tig0022505:+78023 Msa1401280:CDS
GACAAGGATGGTGGAGGTAT+TGG 0.379470 tig0022505:-79396 None:intergenic
GGAGGTGGTGGCAGCGGCAG+CGG 0.382196 tig0022505:-79216 None:intergenic
CTCTAGCAGAGATGACAAAA+AGG 0.382369 tig0022505:+79691 Msa1401280:CDS
TTAACTGCCACTTCACTTTG+TGG 0.383973 tig0022505:-79270 None:intergenic
AAGATTGAAACCTGATCTAT+AGG 0.385295 tig0022505:-78325 None:intergenic
TTCTTGATTGAGATGATCCT+TGG 0.389964 tig0022505:-78280 None:intergenic
GGAGGAGGAGGTGGTGGCAG+CGG 0.393388 tig0022505:-79222 None:intergenic
GAAGAGATTCAACATCTTTG+TGG 0.395126 tig0022505:-80166 None:intergenic
TGTGGCAATTGATGTGTTGA+TGG 0.397743 tig0022505:-79252 None:intergenic
AGATGTGATATCTGAATTGT+AGG 0.400173 tig0022505:-78911 None:intergenic
AAGGTTTACAATGATGTAAA+GGG 0.401168 tig0022505:+77996 Msa1401280:CDS
TGCTAACTCCATGCAATTTG+AGG 0.403026 tig0022505:-80707 None:intergenic
AACACCAATATGCAACAATT+AGG 0.405159 tig0022505:+78706 Msa1401280:CDS
GATAAGCGCTTTAAATCAAT+CGG 0.406062 tig0022505:-79030 None:intergenic
AGCATTGGCGGTGGAGGAGC+TGG 0.406365 tig0022505:-79444 None:intergenic
TCTCTAAGAATTCAAGCTCT+TGG 0.409263 tig0022505:+78997 Msa1401280:CDS
CCGCCACTGTCTCTAGCCTT+AGG 0.409302 tig0022505:+79315 Msa1401280:CDS
GGTGGAAGTGGAGGAGGAGG+TGG 0.410003 tig0022505:-79231 None:intergenic
TGCATAGCTATGGTTGATTA+GGG 0.412933 tig0022505:-80993 None:intergenic
TGTGAGGCTTTAAAGAGTCT+TGG 0.424686 tig0022505:+78610 Msa1401280:CDS
CTCCCTGCTCCAAGTGGAGG+TGG 0.427390 tig0022505:-79495 None:intergenic
CCGCCAATGCTCCGTGGAAA+CGG 0.428552 tig0022505:+79456 Msa1401280:CDS
ATAGCTTCTAGCTTCTTTGA+TGG 0.434446 tig0022505:-80331 None:intergenic
CCACGGAGCATTGGCGGTGG+AGG 0.434534 tig0022505:-79450 None:intergenic
GGTGGGAGAAACACTGCAAT+TGG 0.435680 tig0022505:+79630 Msa1401280:CDS
GTTGAAGTAGATGATGATAT+TGG 0.437036 tig0022505:-78967 None:intergenic
TGACAAACTCACAAGAGAAT+TGG 0.442162 tig0022505:+80951 Msa1401280:CDS
ACCTTTGAAGGCTTCTTTGG+TGG 0.446489 tig0022505:-77978 None:intergenic
AAAGGTTTACAATGATGTAA+AGG 0.449301 tig0022505:+77995 Msa1401280:CDS
CGCATTAATAATAGTAGTGA+TGG 0.451581 tig0022505:+80835 Msa1401280:CDS
AGTGGCGGCGGCAAAGGTGG+TGG 0.457567 tig0022505:-79300 None:intergenic
CCGTTTCCACGGAGCATTGG+CGG 0.461554 tig0022505:-79456 None:intergenic
TCTGTTCATAGGTGTTATCA+AGG 0.461674 tig0022505:+80296 Msa1401280:intron
AGAAGTCGAATTCGATGTTA+TGG 0.462603 tig0022505:-80645 None:intergenic
AATGTGGTGGTAAGTTGCTT+TGG 0.468365 tig0022505:+80869 Msa1401280:CDS
TGATGTGTTGATGGTGGAAG+TGG 0.469576 tig0022505:-79243 None:intergenic
TAAGGACAAGCCTATAGATC+AGG 0.469636 tig0022505:+78315 Msa1401280:CDS
TGATGTAAAGGGAGAGTCAA+TGG 0.470455 tig0022505:+78007 Msa1401280:CDS
CCACCACCTCCACTTGGAGC+AGG 0.473254 tig0022505:+79492 Msa1401280:CDS
GTGGTGGTAAGTTGCTTTGG+AGG 0.474879 tig0022505:+80872 Msa1401280:CDS
CTTTGTCTTCAGAGACATCA+TGG 0.476591 tig0022505:+78088 Msa1401280:CDS
GGCGGCGGCAAAGGTGGTGG+TGG 0.479458 tig0022505:-79297 None:intergenic
TCTTGATTGAGATGATCCTT+GGG 0.484669 tig0022505:-78279 None:intergenic
CCTGCTCCAAGTGGAGGTGG+TGG 0.484761 tig0022505:-79492 None:intergenic
CAAAGTTGTAAATCATGAAA+AGG 0.485977 tig0022505:+79134 Msa1401280:CDS
CCATCCTTGTCCATGAAACC+TGG 0.488336 tig0022505:+79408 Msa1401280:CDS
GGCGGTGGAGGAGCTGGAGC+CGG 0.488348 tig0022505:-79438 None:intergenic
AGCCTCAAAGGAAAATCGTC+TGG 0.489413 tig0022505:+79609 Msa1401280:CDS
GACGGTGGAGGTGGTGATGG+TGG 0.490167 tig0022505:-79354 None:intergenic
AGAGACAGTGGCGGCGGCAA+AGG 0.491312 tig0022505:-79306 None:intergenic
TAGCTTCTAGCTTCTTTGAT+GGG 0.494409 tig0022505:-80330 None:intergenic
TCACCACCTCCACCGTCTCT+AGG 0.496912 tig0022505:+79360 Msa1401280:CDS
CGGAGATGATCCAGGTTTCA+TGG 0.499468 tig0022505:-79418 None:intergenic
GTTGATGGTGGAAGTGGAGG+AGG 0.500360 tig0022505:-79237 None:intergenic
GGAGTGGTCATTTATAGGTA+TGG 0.501583 tig0022505:+78028 Msa1401280:CDS
GGTGGAGGTGGTGATGGTGG+AGG 0.501906 tig0022505:-79351 None:intergenic
CCTCCGTTTCCACGGAGCAT+TGG 0.508023 tig0022505:-79459 None:intergenic
GATGGTGGAAGTGGAGGAGG+AGG 0.509089 tig0022505:-79234 None:intergenic
TTGTCAAGGACTTGAGTCAC+TGG 0.509871 tig0022505:-80427 None:intergenic
AAAGTACACAAAACACATCA+TGG 0.510201 tig0022505:+80085 Msa1401280:CDS
GCTCCAAGTGGAGGTGGTGG+TGG 0.510318 tig0022505:-79489 None:intergenic
CCTCCACCGTCTCTAGGCTT+AGG 0.510896 tig0022505:+79366 Msa1401280:CDS
ATGATGATATTGGACTTAGA+AGG 0.511408 tig0022505:-78957 None:intergenic
AAGGCTAGAGACAGTGGCGG+CGG 0.513519 tig0022505:-79312 None:intergenic
GCGCCACCACCACCTCCACT+TGG 0.513755 tig0022505:+79486 Msa1401280:CDS
AAAAGAACAAACTATAGATA+AGG 0.514437 tig0022505:+79101 Msa1401280:CDS
ACAAACTATAGATAAGGAAA+AGG 0.515486 tig0022505:+79107 Msa1401280:CDS
CATGAAACCTGGATCATCTC+CGG 0.522297 tig0022505:+79419 Msa1401280:CDS
AGAGACGGTGGAGGTGGTGA+TGG 0.522827 tig0022505:-79357 None:intergenic
CATCATCTACTTCAACACTT+TGG 0.526376 tig0022505:+78974 Msa1401280:CDS
GAAGCTAGAAGCTATAAGAA+TGG 0.527500 tig0022505:+80339 Msa1401280:CDS
TCATGAAAAGGAAACAATAG+AGG 0.528783 tig0022505:+79146 Msa1401280:CDS
TCTTGTGTTTCAATCAATTG+TGG 0.528894 tig0022505:-79066 None:intergenic
AAATCTGTATAGAACTCTCA+AGG 0.532254 tig0022505:+79569 Msa1401280:CDS
TTTCCACGGAGCATTGGCGG+TGG 0.535694 tig0022505:-79453 None:intergenic
TAAAGAGTCTTGGAGAGTCA+TGG 0.535751 tig0022505:+78620 Msa1401280:CDS
GTAGAAGGGTCTAGCCTCAA+AGG 0.535970 tig0022505:+79597 Msa1401280:CDS
GCTGGAGCCGGAGATGATCC+AGG 0.537981 tig0022505:-79426 None:intergenic
GACAGTGGCGGCGGCAAAGG+TGG 0.540110 tig0022505:-79303 None:intergenic
AAGCCTAGAGACGGTGGAGG+TGG 0.540265 tig0022505:-79363 None:intergenic
TAGGTGTTATCAAGGTTTGA+AGG 0.540380 tig0022505:+80304 Msa1401280:intron
TATTACCAATTTCAAGACAA+AGG 0.542324 tig0022505:+80121 Msa1401280:CDS
GTAGATGGTTATCACTACCT+TGG 0.544468 tig0022505:+78237 Msa1401280:intron
AGGTAGTGCTACTGAGCCTA+AGG 0.545989 tig0022505:-79331 None:intergenic
TGGTGGTAAGTTGCTTTGGA+GGG 0.552312 tig0022505:+80873 Msa1401280:CDS
CACCACCTCCACTTGGAGCA+GGG 0.554322 tig0022505:+79493 Msa1401280:CDS
TCCACCAAAGAAGCCTTCAA+AGG 0.557860 tig0022505:+77977 Msa1401280:CDS
CACTGGTGGAAAACAAGGAA+TGG 0.561722 tig0022505:+79662 Msa1401280:CDS
GCGCAGATCCTCCGTTTCCA+CGG 0.563300 tig0022505:-79467 None:intergenic
AAGCCTTTGTAGATCTTCCA+AGG 0.563916 tig0022505:-78254 None:intergenic
GAAACTAACTGATGAATCAC+AGG 0.577688 tig0022505:+80193 Msa1401280:CDS
CTCTCAAGGGAAAAGTAGAA+GGG 0.578588 tig0022505:+79583 Msa1401280:CDS
AGAAACACTGGTGGAAAACA+AGG 0.579013 tig0022505:+79657 Msa1401280:CDS
CTCAAAGGAAAATCGTCTGG+TGG 0.580657 tig0022505:+79612 Msa1401280:CDS
GGCAATTGATGTGTTGATGG+TGG 0.583801 tig0022505:-79249 None:intergenic
GGATGTTTCCTCAAATTGCA+TGG 0.583964 tig0022505:+80699 Msa1401280:CDS
ATCTACAAAGGCTTTACCCA+AGG 0.588374 tig0022505:+78263 Msa1401280:CDS
AAGGAAGCAGAAGTGTTCAA+AGG 0.591284 tig0022505:-78119 None:intergenic
AGGGTTTATACATTTGCTGG+TGG 0.593056 tig0022505:+80913 Msa1401280:CDS
CCAGGTTTCATGGACAAGGA+TGG 0.595220 tig0022505:-79408 None:intergenic
CACTTCTGCTTCCTTACGTG+AGG 0.598553 tig0022505:+78127 Msa1401280:CDS
TGTGTTGATGGTGGAAGTGG+AGG 0.604118 tig0022505:-79240 None:intergenic
TCAATTGCCACAAAGTGAAG+TGG 0.604274 tig0022505:+79263 Msa1401280:CDS
TCAAAGGAAAATCGTCTGGT+GGG 0.608772 tig0022505:+79613 Msa1401280:CDS
GGTTTCATGGACAAGGATGG+TGG 0.610612 tig0022505:-79405 None:intergenic
CAGAAGTGTTCAAAGGAGCA+AGG 0.611060 tig0022505:-78112 None:intergenic
TTGGTGTTATCCTTGCATGA+TGG 0.614287 tig0022505:-78691 None:intergenic
CCTCCACCGCCAATGCTCCG+TGG 0.617199 tig0022505:+79450 Msa1401280:CDS
GGGTTTGGCATTCTTCTGTG+AGG 0.617375 tig0022505:+78594 Msa1401280:intron
TGATCCAGGTTTCATGGACA+AGG 0.627277 tig0022505:-79412 None:intergenic
AATAACGTTCGATCTTGTCA+AGG 0.627459 tig0022505:-80441 None:intergenic
GCAATTGGAGCAAGAAACAC+TGG 0.629446 tig0022505:+79645 Msa1401280:CDS
GTTACAAATACCATCATGCA+AGG 0.632250 tig0022505:+78681 Msa1401280:CDS
GATCTCCCTGCTCCAAGTGG+AGG 0.641435 tig0022505:-79498 None:intergenic
ACTCACAAGAGAATTGGCTA+AGG 0.642978 tig0022505:+80957 Msa1401280:CDS
TTCATGGACAAGGATGGTGG+AGG 0.643480 tig0022505:-79402 None:intergenic
CCAATGCTCCGTGGAAACGG+AGG 0.648433 tig0022505:+79459 Msa1401280:CDS
ATTGATCCTAAGCCTAGAGA+CGG 0.651541 tig0022505:-79372 None:intergenic
AAAGATCTCCCTGCTCCAAG+TGG 0.652536 tig0022505:-79501 None:intergenic
AATCTGTATAGAACTCTCAA+GGG 0.653028 tig0022505:+79570 Msa1401280:CDS
CCTAAGCCTAGAGACGGTGG+AGG 0.655178 tig0022505:-79366 None:intergenic
CTACCTTGGAAGATCTACAA+AGG 0.659352 tig0022505:+78251 Msa1401280:CDS
GATCCTAAGCCTAGAGACGG+TGG 0.667444 tig0022505:-79369 None:intergenic
ATTGGAGCAAGAAACACTGG+TGG 0.680315 tig0022505:+79648 Msa1401280:CDS
GAGCCTAAGGCTAGAGACAG+TGG 0.682667 tig0022505:-79318 None:intergenic
CCTAAGGCTAGAGACAGTGG+CGG 0.692286 tig0022505:-79315 None:intergenic
TAAAGGGAGAGTCAATGGAG+TGG 0.712480 tig0022505:+78012 Msa1401280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACATTCCTAATTTTAATT+AGG - tig0022505:78359-78378 None:intergenic 15.0%
!! TTAAAATTAGGAATGTTATT+TGG + tig0022505:78361-78380 Msa1401280:intron 15.0%
!!! ACTTTTCATTTGTATTTTAA+AGG + tig0022505:79725-79744 Msa1401280:intron 15.0%
!! ATAGCATATATTAATATGAA+GGG - tig0022505:80487-80506 None:intergenic 15.0%
!! TATAGCATATATTAATATGA+AGG - tig0022505:80488-80507 None:intergenic 15.0%
!! CATACAAAAAAAAATACATT+TGG + tig0022505:80749-80768 Msa1401280:intron 15.0%
!!! GTAATTTTTACTTTTCTTCA+TGG + tig0022505:78149-78168 Msa1401280:intron 20.0%
!! TATATATGTCATATTGTAGA+TGG + tig0022505:78222-78241 Msa1401280:intron 20.0%
!! CAAGAAATTGACAAATATTA+AGG + tig0022505:78297-78316 Msa1401280:CDS 20.0%
!! TGTTACACCTAATTAAAATT+AGG + tig0022505:78349-78368 Msa1401280:intron 20.0%
!! TATTTGGACAATAAAACTAT+TGG + tig0022505:78377-78396 Msa1401280:intron 20.0%
!! AAGTGAAAAATTTGATATCA+TGG + tig0022505:78858-78877 Msa1401280:CDS 20.0%
!! AAAAGAACAAACTATAGATA+AGG + tig0022505:79101-79120 Msa1401280:CDS 20.0%
!! TATAAGTTGCTTACAAAAAT+TGG - tig0022505:79840-79859 None:intergenic 20.0%
!! TCAAAAATAAGAAATAGAGA+GGG - tig0022505:80005-80024 None:intergenic 20.0%
!! ATCAAAAATAAGAAATAGAG+AGG - tig0022505:80006-80025 None:intergenic 20.0%
!!! TTTCTTATTTTTGATTTCCT+TGG + tig0022505:80011-80030 Msa1401280:intron 20.0%
!! TATTATACAATTCTGTTCAT+AGG + tig0022505:80285-80304 Msa1401280:intron 20.0%
!! ACGATTAAATAAATTTATGC+AGG - tig0022505:80532-80551 None:intergenic 20.0%
!! TGAAGAATTGAAAAAATTCA+AGG + tig0022505:80621-80640 Msa1401280:CDS 20.0%
!! GAAGAATTGAAAAAATTCAA+GGG + tig0022505:80622-80641 Msa1401280:CDS 20.0%
!!! TTGCTTCTTTAATTTTTACA+AGG - tig0022505:80675-80694 None:intergenic 20.0%
!! TGTAAAAATTAAAGAAGCAA+TGG + tig0022505:80675-80694 Msa1401280:CDS 20.0%
!! ACATTTGGTTAATATTCATT+AGG + tig0022505:80764-80783 Msa1401280:intron 20.0%
!! TTTGCATTTAAATATAATGC+AGG + tig0022505:80807-80826 Msa1401280:intron 20.0%
! AAAGGTTTACAATGATGTAA+AGG + tig0022505:77995-78014 Msa1401280:CDS 25.0%
! AAGGTTTACAATGATGTAAA+GGG + tig0022505:77996-78015 Msa1401280:CDS 25.0%
!! TGAAGACAAAGATTTTCTTA+TGG - tig0022505:78079-78098 None:intergenic 25.0%
!!! ATAAGCGGTGTATTTTTATA+CGG + tig0022505:78457-78476 Msa1401280:intron 25.0%
! AATGTAGACAGTATTTCATT+AGG + tig0022505:78573-78592 Msa1401280:intron 25.0%
! ATGTAGACAGTATTTCATTA+GGG + tig0022505:78574-78593 Msa1401280:intron 25.0%
! ATCTGATTAATTCTTTGACA+AGG - tig0022505:78759-78778 None:intergenic 25.0%
!!! TAACATTTGAATTGTTTTGC+AGG + tig0022505:78793-78812 Msa1401280:intron 25.0%
! ACAAACTATAGATAAGGAAA+AGG + tig0022505:79107-79126 Msa1401280:CDS 25.0%
! CAAAGTTGTAAATCATGAAA+AGG + tig0022505:79134-79153 Msa1401280:CDS 25.0%
!!! AACGCTTAATTTTAAGATGT+TGG + tig0022505:79935-79954 Msa1401280:intron 25.0%
! ATTTGATTCAACTTAGACAT+GGG - tig0022505:79972-79991 None:intergenic 25.0%
! CAAAAATAAGAAATAGAGAG+GGG - tig0022505:80004-80023 None:intergenic 25.0%
! TATTACCAATTTCAAGACAA+AGG + tig0022505:80121-80140 Msa1401280:CDS 25.0%
! AAAAATTAAAGAAGCAATGG+TGG + tig0022505:80678-80697 Msa1401280:CDS 25.0%
! TATAAACCCTAAATGCAAAT+TGG - tig0022505:80903-80922 None:intergenic 25.0%
ACATCATTGTAAACCTTTGA+AGG - tig0022505:77993-78012 None:intergenic 30.0%
AGTAAAAATTACCTCACGTA+AGG - tig0022505:78141-78160 None:intergenic 30.0%
GAAAGACAATGTTATAAACG+AGG - tig0022505:78198-78217 None:intergenic 30.0%
AAGATTGAAACCTGATCTAT+AGG - tig0022505:78328-78347 None:intergenic 30.0%
AAAAATACACCGCTTATAAC+CGG - tig0022505:78454-78473 None:intergenic 30.0%
!! TAAGCGGTGTATTTTTATAC+GGG + tig0022505:78458-78477 Msa1401280:intron 30.0%
ACCATCCTAATGATGATTAT+TGG + tig0022505:78535-78554 Msa1401280:intron 30.0%
ACCAATAATCATCATTAGGA+TGG - tig0022505:78539-78558 None:intergenic 30.0%
GGATACCAATAATCATCATT+AGG - tig0022505:78543-78562 None:intergenic 30.0%
! CTGTCTACATTTAGCATTTT+GGG - tig0022505:78564-78583 None:intergenic 30.0%
! ACTGTCTACATTTAGCATTT+TGG - tig0022505:78565-78584 None:intergenic 30.0%
AACACCAATATGCAACAATT+AGG + tig0022505:78706-78725 Msa1401280:CDS 30.0%
CATACCTAATTGTTGCATAT+TGG - tig0022505:78713-78732 None:intergenic 30.0%
AGATGTGATATCTGAATTGT+AGG - tig0022505:78914-78933 None:intergenic 30.0%
ATGATGATATTGGACTTAGA+AGG - tig0022505:78960-78979 None:intergenic 30.0%
GTTGAAGTAGATGATGATAT+TGG - tig0022505:78970-78989 None:intergenic 30.0%
! GATAAGCGCTTTAAATCAAT+CGG - tig0022505:79033-79052 None:intergenic 30.0%
TCTTGTGTTTCAATCAATTG+TGG - tig0022505:79069-79088 None:intergenic 30.0%
TCATGAAAAGGAAACAATAG+AGG + tig0022505:79146-79165 Msa1401280:CDS 30.0%
CTTAAACACAGTTGAGAAAT+TGG + tig0022505:79182-79201 Msa1401280:CDS 30.0%
CTGAAAAGATCAACACAATT+AGG + tig0022505:79546-79565 Msa1401280:CDS 30.0%
AAATCTGTATAGAACTCTCA+AGG + tig0022505:79569-79588 Msa1401280:CDS 30.0%
AATCTGTATAGAACTCTCAA+GGG + tig0022505:79570-79589 Msa1401280:CDS 30.0%
GCTTATTTGAACTTATCTAC+CGG + tig0022505:79747-79766 Msa1401280:intron 30.0%
CATTTGATTCAACTTAGACA+TGG - tig0022505:79973-79992 None:intergenic 30.0%
ATCTAGTAAAACACAAACCA+AGG - tig0022505:80031-80050 None:intergenic 30.0%
AAAGTACACAAAACACATCA+TGG + tig0022505:80085-80104 Msa1401280:CDS 30.0%
CATTTCCTTTGTCTTGAAAT+TGG - tig0022505:80129-80148 None:intergenic 30.0%
! GATCGAACGTTATTTCAATA+AGG + tig0022505:80450-80469 Msa1401280:CDS 30.0%
CAAAACAGAATTAGATGCTT+TGG + tig0022505:80585-80604 Msa1401280:CDS 30.0%
CGCATTAATAATAGTAGTGA+TGG + tig0022505:80835-80854 Msa1401280:CDS 30.0%
GATGGAAAAAGAAAAGAATG+TGG + tig0022505:80853-80872 Msa1401280:CDS 30.0%
! TTTAGGGTTTATACATTTGC+TGG + tig0022505:80910-80929 Msa1401280:CDS 30.0%
! TAAACCTTTGAAGGCTTCTT+TGG - tig0022505:77984-78003 None:intergenic 35.0%
TCAATGGAGTGGTCATTTAT+AGG + tig0022505:78023-78042 Msa1401280:CDS 35.0%
TCTTGATTGAGATGATCCTT+GGG - tig0022505:78282-78301 None:intergenic 35.0%
TTCTTGATTGAGATGATCCT+TGG - tig0022505:78283-78302 None:intergenic 35.0%
TCAATTACATCAACAGTTGC+CGG + tig0022505:78432-78451 Msa1401280:intron 35.0%
!! AAGCGGTGTATTTTTATACG+GGG + tig0022505:78459-78478 Msa1401280:intron 35.0%
GACAGTATTTCATTAGGGTT+TGG + tig0022505:78579-78598 Msa1401280:intron 35.0%
GTTACAAATACCATCATGCA+AGG + tig0022505:78681-78700 Msa1401280:CDS 35.0%
! TTTTGCAGGTGAAACTATGT+TGG + tig0022505:78807-78826 Msa1401280:intron 35.0%
TAGGAGTTGCAAACTTTCTT+TGG - tig0022505:78895-78914 None:intergenic 35.0%
CATCATCTACTTCAACACTT+TGG + tig0022505:78974-78993 Msa1401280:CDS 35.0%
! TCTCTAAGAATTCAAGCTCT+TGG + tig0022505:78997-79016 Msa1401280:CDS 35.0%
!! TTCAGTTTTGTAGTTGCTCT+AGG - tig0022505:79531-79550 None:intergenic 35.0%
! TTTAAGATGTTGGTCCAAAC+AGG + tig0022505:79945-79964 Msa1401280:intron 35.0%
TTAAGATGTTGGTCCAAACA+GGG + tig0022505:79946-79965 Msa1401280:intron 35.0%
GAAGAGATTCAACATCTTTG+TGG - tig0022505:80169-80188 None:intergenic 35.0%
GAAACTAACTGATGAATCAC+AGG + tig0022505:80193-80212 Msa1401280:CDS 35.0%
! TCTGTTCATAGGTGTTATCA+AGG + tig0022505:80296-80315 Msa1401280:intron 35.0%
! TAGGTGTTATCAAGGTTTGA+AGG + tig0022505:80304-80323 Msa1401280:intron 35.0%
!! TAGCTTCTAGCTTCTTTGAT+GGG - tig0022505:80333-80352 None:intergenic 35.0%
!! ATAGCTTCTAGCTTCTTTGA+TGG - tig0022505:80334-80353 None:intergenic 35.0%
GAAGCTAGAAGCTATAAGAA+TGG + tig0022505:80339-80358 Msa1401280:CDS 35.0%
AATAACGTTCGATCTTGTCA+AGG - tig0022505:80444-80463 None:intergenic 35.0%
AGAAGTCGAATTCGATGTTA+TGG - tig0022505:80648-80667 None:intergenic 35.0%
GGAAAAAGAAAAGAATGTGG+TGG + tig0022505:80856-80875 Msa1401280:CDS 35.0%
GGCTTTCCAATTTGCATTTA+GGG + tig0022505:80894-80913 Msa1401280:CDS 35.0%
TGACAAACTCACAAGAGAAT+TGG + tig0022505:80951-80970 Msa1401280:CDS 35.0%
TGATGTAAAGGGAGAGTCAA+TGG + tig0022505:78007-78026 Msa1401280:CDS 40.0%
GGAGTGGTCATTTATAGGTA+TGG + tig0022505:78028-78047 Msa1401280:CDS 40.0%
CTTTGTCTTCAGAGACATCA+TGG + tig0022505:78088-78107 Msa1401280:CDS 40.0%
!! AAGGAAGCAGAAGTGTTCAA+AGG - tig0022505:78122-78141 None:intergenic 40.0%
GTAGATGGTTATCACTACCT+TGG + tig0022505:78237-78256 Msa1401280:intron 40.0%
CTACCTTGGAAGATCTACAA+AGG + tig0022505:78251-78270 Msa1401280:CDS 40.0%
AAGCCTTTGTAGATCTTCCA+AGG - tig0022505:78257-78276 None:intergenic 40.0%
ATCTACAAAGGCTTTACCCA+AGG + tig0022505:78263-78282 Msa1401280:CDS 40.0%
TAAGGACAAGCCTATAGATC+AGG + tig0022505:78315-78334 Msa1401280:CDS 40.0%
!! TGTGAGGCTTTAAAGAGTCT+TGG + tig0022505:78610-78629 Msa1401280:CDS 40.0%
TAAAGAGTCTTGGAGAGTCA+TGG + tig0022505:78620-78639 Msa1401280:CDS 40.0%
!! TTGGTGTTATCCTTGCATGA+TGG - tig0022505:78694-78713 None:intergenic 40.0%
!!! AGGACAGATTTTGGTGTTAG+AGG - tig0022505:78940-78959 None:intergenic 40.0%
! GGACTTAGAAGGACAGATTT+TGG - tig0022505:78949-78968 None:intergenic 40.0%
TGTGGCAATTGATGTGTTGA+TGG - tig0022505:79255-79274 None:intergenic 40.0%
TCAATTGCCACAAAGTGAAG+TGG + tig0022505:79263-79282 Msa1401280:CDS 40.0%
! TTAACTGCCACTTCACTTTG+TGG - tig0022505:79273-79292 None:intergenic 40.0%
ATTGATCCTAAGCCTAGAGA+CGG - tig0022505:79375-79394 None:intergenic 40.0%
ACTCTCAAGGGAAAAGTAGA+AGG + tig0022505:79582-79601 Msa1401280:CDS 40.0%
CTCTCAAGGGAAAAGTAGAA+GGG + tig0022505:79583-79602 Msa1401280:CDS 40.0%
TCAAAGGAAAATCGTCTGGT+GGG + tig0022505:79613-79632 Msa1401280:CDS 40.0%
AGAAACACTGGTGGAAAACA+AGG + tig0022505:79657-79676 Msa1401280:CDS 40.0%
CTCTAGCAGAGATGACAAAA+AGG + tig0022505:79691-79710 Msa1401280:CDS 40.0%
AGGGTCATCATTGTTTGTAC+CGG - tig0022505:79769-79788 None:intergenic 40.0%
GTACAAACAATGATGACCCT+GGG + tig0022505:79769-79788 Msa1401280:intron 40.0%
AGCAGCACTCTTCAACAAAT+TGG + tig0022505:80363-80382 Msa1401280:CDS 40.0%
GGATGTTTCCTCAAATTGCA+TGG + tig0022505:80699-80718 Msa1401280:CDS 40.0%
TGCTAACTCCATGCAATTTG+AGG - tig0022505:80710-80729 None:intergenic 40.0%
TTGCATGGAGTTAGCACTTA+AGG + tig0022505:80714-80733 Msa1401280:CDS 40.0%
AATGTGGTGGTAAGTTGCTT+TGG + tig0022505:80869-80888 Msa1401280:CDS 40.0%
GGGCTTTCCAATTTGCATTT+AGG + tig0022505:80893-80912 Msa1401280:CDS 40.0%
! AGGGTTTATACATTTGCTGG+TGG + tig0022505:80913-80932 Msa1401280:CDS 40.0%
ACTCACAAGAGAATTGGCTA+AGG + tig0022505:80957-80976 Msa1401280:CDS 40.0%
TCCACCAAAGAAGCCTTCAA+AGG + tig0022505:77977-77996 Msa1401280:CDS 45.0%
! ACCTTTGAAGGCTTCTTTGG+TGG - tig0022505:77981-78000 None:intergenic 45.0%
TAAAGGGAGAGTCAATGGAG+TGG + tig0022505:78012-78031 Msa1401280:CDS 45.0%
!! CAGAAGTGTTCAAAGGAGCA+AGG - tig0022505:78115-78134 None:intergenic 45.0%
! CAACAGTTGCCGGTTATAAG+CGG + tig0022505:78442-78461 Msa1401280:intron 45.0%
!! TGATGTGTTGATGGTGGAAG+TGG - tig0022505:79246-79265 None:intergenic 45.0%
! GGCAATTGATGTGTTGATGG+TGG - tig0022505:79252-79271 None:intergenic 45.0%
TGATCCAGGTTTCATGGACA+AGG - tig0022505:79415-79434 None:intergenic 45.0%
CATGAAACCTGGATCATCTC+CGG + tig0022505:79419-79438 Msa1401280:CDS 45.0%
TTGGAGCAGGGAGATCTTTA+AGG + tig0022505:79505-79524 Msa1401280:CDS 45.0%
AGCCTCAAAGGAAAATCGTC+TGG + tig0022505:79609-79628 Msa1401280:CDS 45.0%
! CACCAGACGATTTTCCTTTG+AGG - tig0022505:79614-79633 None:intergenic 45.0%
CTCAAAGGAAAATCGTCTGG+TGG + tig0022505:79612-79631 Msa1401280:CDS 45.0%
GCAATTGGAGCAAGAAACAC+TGG + tig0022505:79645-79664 Msa1401280:CDS 45.0%
ATTGGAGCAAGAAACACTGG+TGG + tig0022505:79648-79667 Msa1401280:CDS 45.0%
CACTGGTGGAAAACAAGGAA+TGG + tig0022505:79662-79681 Msa1401280:CDS 45.0%
GGTACAAACAATGATGACCC+TGG + tig0022505:79768-79787 Msa1401280:intron 45.0%
TTGTCAAGGACTTGAGTCAC+TGG - tig0022505:80430-80449 None:intergenic 45.0%
! TGGTGGTAAGTTGCTTTGGA+GGG + tig0022505:80873-80892 Msa1401280:CDS 45.0%
CACTTCTGCTTCCTTACGTG+AGG + tig0022505:78127-78146 Msa1401280:CDS 50.0%
GGGTTTGGCATTCTTCTGTG+AGG + tig0022505:78594-78613 Msa1401280:intron 50.0%
!! TGTGTTGATGGTGGAAGTGG+AGG - tig0022505:79243-79262 None:intergenic 50.0%
! AGGTAGTGCTACTGAGCCTA+AGG - tig0022505:79334-79353 None:intergenic 50.0%
!! GACAAGGATGGTGGAGGTAT+TGG - tig0022505:79399-79418 None:intergenic 50.0%
! TTCATGGACAAGGATGGTGG+AGG - tig0022505:79405-79424 None:intergenic 50.0%
GGTTTCATGGACAAGGATGG+TGG - tig0022505:79408-79427 None:intergenic 50.0%
CCAGGTTTCATGGACAAGGA+TGG - tig0022505:79411-79430 None:intergenic 50.0%
CCATCCTTGTCCATGAAACC+TGG + tig0022505:79408-79427 Msa1401280:CDS 50.0%
CGGAGATGATCCAGGTTTCA+TGG - tig0022505:79421-79440 None:intergenic 50.0%
AAAGATCTCCCTGCTCCAAG+TGG - tig0022505:79504-79523 None:intergenic 50.0%
GTAGAAGGGTCTAGCCTCAA+AGG + tig0022505:79597-79616 Msa1401280:CDS 50.0%
GGTGGGAGAAACACTGCAAT+TGG + tig0022505:79630-79649 Msa1401280:CDS 50.0%
ACTTAGACATGGGCCCTGTT+TGG - tig0022505:79962-79981 None:intergenic 50.0%
! GTGGTGGTAAGTTGCTTTGG+AGG + tig0022505:80872-80891 Msa1401280:CDS 50.0%
!! GTTGATGGTGGAAGTGGAGG+AGG - tig0022505:79240-79259 None:intergenic 55.0%
CCTAAGGCTAGAGACAGTGG+CGG - tig0022505:79318-79337 None:intergenic 55.0%
GAGCCTAAGGCTAGAGACAG+TGG - tig0022505:79321-79340 None:intergenic 55.0%
GATCCTAAGCCTAGAGACGG+TGG - tig0022505:79372-79391 None:intergenic 55.0%
AACAATGATGACCCTGGGCG+CGG + tig0022505:79774-79793 Msa1401280:intron 55.0%
!! GATGGTGGAAGTGGAGGAGG+AGG - tig0022505:79237-79256 None:intergenic 60.0%
AAGGCTAGAGACAGTGGCGG+CGG - tig0022505:79315-79334 None:intergenic 60.0%
! CCGCCACTGTCTCTAGCCTT+AGG + tig0022505:79315-79334 Msa1401280:CDS 60.0%
AGAGACGGTGGAGGTGGTGA+TGG - tig0022505:79360-79379 None:intergenic 60.0%
TCACCACCTCCACCGTCTCT+AGG + tig0022505:79360-79379 Msa1401280:CDS 60.0%
AAGCCTAGAGACGGTGGAGG+TGG - tig0022505:79366-79385 None:intergenic 60.0%
CCTAAGCCTAGAGACGGTGG+AGG - tig0022505:79369-79388 None:intergenic 60.0%
CCTCCACCGTCTCTAGGCTT+AGG + tig0022505:79366-79385 Msa1401280:CDS 60.0%
!! TTTCCACGGAGCATTGGCGG+TGG - tig0022505:79456-79475 None:intergenic 60.0%
!! CCGTTTCCACGGAGCATTGG+CGG - tig0022505:79459-79478 None:intergenic 60.0%
CCGCCAATGCTCCGTGGAAA+CGG + tig0022505:79456-79475 Msa1401280:CDS 60.0%
CCTCCGTTTCCACGGAGCAT+TGG - tig0022505:79462-79481 None:intergenic 60.0%
CCAATGCTCCGTGGAAACGG+AGG + tig0022505:79459-79478 Msa1401280:CDS 60.0%
GCGCAGATCCTCCGTTTCCA+CGG - tig0022505:79470-79489 None:intergenic 60.0%
CACCACCTCCACTTGGAGCA+GGG + tig0022505:79493-79512 Msa1401280:CDS 60.0%
GATCTCCCTGCTCCAAGTGG+AGG - tig0022505:79501-79520 None:intergenic 60.0%
ACAATGATGACCCTGGGCGC+GGG + tig0022505:79775-79794 Msa1401280:intron 60.0%
GGAAGTGGAGGAGGAGGTGG+TGG - tig0022505:79231-79250 None:intergenic 65.0%
GGTGGAAGTGGAGGAGGAGG+TGG - tig0022505:79234-79253 None:intergenic 65.0%
AGAGACAGTGGCGGCGGCAA+AGG - tig0022505:79309-79328 None:intergenic 65.0%
!! GGTGGAGGTGGTGATGGTGG+AGG - tig0022505:79354-79373 None:intergenic 65.0%
!! GACGGTGGAGGTGGTGATGG+TGG - tig0022505:79357-79376 None:intergenic 65.0%
GCTGGAGCCGGAGATGATCC+AGG - tig0022505:79429-79448 None:intergenic 65.0%
!! AGCATTGGCGGTGGAGGAGC+TGG - tig0022505:79447-79466 None:intergenic 65.0%
! GCTCCAAGTGGAGGTGGTGG+TGG - tig0022505:79492-79511 None:intergenic 65.0%
CCTGCTCCAAGTGGAGGTGG+TGG - tig0022505:79495-79514 None:intergenic 65.0%
CCACCACCTCCACTTGGAGC+AGG + tig0022505:79492-79511 Msa1401280:CDS 65.0%
CTCCCTGCTCCAAGTGGAGG+TGG - tig0022505:79498-79517 None:intergenic 65.0%
! GGAGGAGGAGGTGGTGGCAG+CGG - tig0022505:79225-79244 None:intergenic 70.0%
AGTGGCGGCGGCAAAGGTGG+TGG - tig0022505:79303-79322 None:intergenic 70.0%
GACAGTGGCGGCGGCAAAGG+TGG - tig0022505:79306-79325 None:intergenic 70.0%
!! CCACGGAGCATTGGCGGTGG+AGG - tig0022505:79453-79472 None:intergenic 70.0%
CCTCCACCGCCAATGCTCCG+TGG + tig0022505:79450-79469 Msa1401280:CDS 70.0%
GCGCCACCACCACCTCCACT+TGG + tig0022505:79486-79505 Msa1401280:CDS 70.0%
ATGATGACCCTGGGCGCGGG+TGG + tig0022505:79778-79797 Msa1401280:intron 70.0%
! GGAGGTGGTGGCAGCGGCAG+CGG - tig0022505:79219-79238 None:intergenic 75.0%
! GGCGGCGGCAAAGGTGGTGG+TGG - tig0022505:79300-79319 None:intergenic 75.0%
GGCGGTGGAGGAGCTGGAGC+CGG - tig0022505:79441-79460 None:intergenic 75.0%
TGACCCTGGGCGCGGGTGGT+AGG + tig0022505:79782-79801 Msa1401280:intron 75.0%
GACCCTGGGCGCGGGTGGTA+GGG + tig0022505:79783-79802 Msa1401280:intron 75.0%
ACCCTGGGCGCGGGTGGTAG+GGG + tig0022505:79784-79803 Msa1401280:intron 75.0%
! GCCCCTACCACCCGCGCCCA+GGG - tig0022505:79788-79807 None:intergenic 80.0%
! CGCCCCTACCACCCGCGCCC+AGG - tig0022505:79789-79808 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0022505 gene 77963 81008 77963 ID=Msa1401280;Name=Msa1401280
tig0022505 mRNA 77963 81008 77963 ID=Msa1401280-mRNA-1;Parent=Msa1401280;Name=Msa1401280-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0|0|1|1|1|8|0|658
tig0022505 exon 77963 78148 77963 ID=Msa1401280-mRNA-1:exon:18233;Parent=Msa1401280-mRNA-1
tig0022505 exon 78241 78336 78241 ID=Msa1401280-mRNA-1:exon:18234;Parent=Msa1401280-mRNA-1
tig0022505 exon 78595 78727 78595 ID=Msa1401280-mRNA-1:exon:18235;Parent=Msa1401280-mRNA-1
tig0022505 exon 78815 79712 78815 ID=Msa1401280-mRNA-1:exon:18236;Parent=Msa1401280-mRNA-1
tig0022505 exon 80049 80214 80049 ID=Msa1401280-mRNA-1:exon:18237;Parent=Msa1401280-mRNA-1
tig0022505 exon 80307 80471 80307 ID=Msa1401280-mRNA-1:exon:18238;Parent=Msa1401280-mRNA-1
tig0022505 exon 80583 80735 80583 ID=Msa1401280-mRNA-1:exon:18239;Parent=Msa1401280-mRNA-1
tig0022505 exon 80829 81008 80829 ID=Msa1401280-mRNA-1:exon:18240;Parent=Msa1401280-mRNA-1
tig0022505 CDS 77963 78148 77963 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 78241 78336 78241 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 78595 78727 78595 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 78815 79712 78815 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 80049 80214 80049 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 80307 80471 80307 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 80583 80735 80583 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
tig0022505 CDS 80829 81008 80829 ID=Msa1401280-mRNA-1:cds;Parent=Msa1401280-mRNA-1
Gene Sequence

>Msa1401280

ATGAGAATTTCTACTCCACCAAAGAAGCCTTCAAAGGTTTACAATGATGTAAAGGGAGAGTCAATGGAGTGGTCATTTATAGGTATGGATCAATTGATGTTAATGATGAAAGTCCATAAGAAAATCTTTGTCTTCAGAGACATCATGGACCTTGCTCCTTTGAACACTTCTGCTTCCTTACGTGAGATGGTTATCACTACCTTGGAAGATCTACAAAGGCTTTACCCAAGGATCATCTCAATCAAGAAATTGACAAATATTAAGGACAAGCCTATAGATCAGGGTTTGGCATTCTTCTGTGAGGCTTTAAAGAGTCTTGGAGAGTCATGGTTGAAGAAAAATGATTTTATGTACAACAAAAATTGTGAGTTACAAATACCATCATGCAAGGATAACACCAATATGCAACAATTAGGTGAAACTATGTTGGCTACACTTGATTGTTTAATTAAGATTGCAAGTGAAAAATTTGATATCATGGAAGAAGATACGCCAAAGAAAGTTTGCAACTCCTACAATTCAGATATCACATCTTCTCCTCTAACACCAAAATCTGTCCTTCTAAGTCCAATATCATCATCTACTTCAACACTTTGGTCTCTAAGAATTCAAGCTCTTGGAAAGCTAAAACCGATTGATTTAAAGCGCTTATCTTATCATATGTCGCCACAATTGATTGAAACACAAGATAATAAGATAGAAAAAGAACAAACTATAGATAAGGAAAAGGATCACAAAGTTGTAAATCATGAAAAGGAAACAATAGAGGATCTTGATTTTGACTTAAACACAGTTGAGAAATTGGATAAAACAATGCCGCTGCCGCTGCCACCACCTCCTCCTCCACTTCCACCATCAACACATCAATTGCCACAAAGTGAAGTGGCAGTTAAGATACCACCACCACCTTTGCCGCCGCCACTGTCTCTAGCCTTAGGCTCAGTAGCACTACCTCCACCATCACCACCTCCACCGTCTCTAGGCTTAGGATCAATTCCAATACCTCCACCATCCTTGTCCATGAAACCTGGATCATCTCCGGCTCCAGCTCCTCCACCGCCAATGCTCCGTGGAAACGGAGGATCTGCGCCACCACCACCTCCACTTGGAGCAGGGAGATCTTTAAGGCCTAGAGCAACTACAAAACTGAAAAGATCAACACAATTAGGAAATCTGTATAGAACTCTCAAGGGAAAAGTAGAAGGGTCTAGCCTCAAAGGAAAATCGTCTGGTGGGAGAAACACTGCAATTGGAGCAAGAAACACTGGTGGAAAACAAGGAATGGCTGATGCTCTAGCAGAGATGACAAAAAGATCATCTTACTTTCAACAAATAGAAGAAGATGTTCAAAAGTACACAAAACACATCATGGAATTGAGATCTTCTATTACCAATTTCAAGACAAAGGAAATGACAGAATTGATCAAGTTCCACAAAGATGTTGAATCTCTTCTTGAGAAACTAACTGATGAATCACAGGTGTTATCAAGGTTTGAAGGTTTCCCATCAAAGAAGCTAGAAGCTATAAGAATGGCAGCAGCACTCTTCAACAAATTGGATTCAATACTTAATGAGCTTCAAAATGTGAATATAGTTACACCAGTGACTCAAGTCCTTGACAAGATCGAACGTTATTTCAATAAGATCAAAACAGAATTAGATGCTTTGGAGCGAACGAAAGATGAAGAATTGAAAAAATTCAAGGGCCATAACATCGAATTCGACTTCTACATCCTTGTAAAAATTAAAGAAGCAATGGTGGATGTTTCCTCAAATTGCATGGAGTTAGCACTTAAGGAAAGACGCATTAATAATAGTAGTGATGGAAAAAGAAAAGAATGTGGTGGTAAGTTGCTTTGGAGGGCTTTCCAATTTGCATTTAGGGTTTATACATTTGCTGGTGGACATGATGATCGTGCTGACAAACTCACAAGAGAATTGGCTAAGGAAATTGAAAGTGACCCTAATCAACCATAG

Protein sequence

>Msa1401280

MRISTPPKKPSKVYNDVKGESMEWSFIGMDQLMLMMKVHKKIFVFRDIMDLAPLNTSASLREMVITTLEDLQRLYPRIISIKKLTNIKDKPIDQGLAFFCEALKSLGESWLKKNDFMYNKNCELQIPSCKDNTNMQQLGETMLATLDCLIKIASEKFDIMEEDTPKKVCNSYNSDITSSPLTPKSVLLSPISSSTSTLWSLRIQALGKLKPIDLKRLSYHMSPQLIETQDNKIEKEQTIDKEKDHKVVNHEKETIEDLDFDLNTVEKLDKTMPLPLPPPPPPLPPSTHQLPQSEVAVKIPPPPLPPPLSLALGSVALPPPSPPPPSLGLGSIPIPPPSLSMKPGSSPAPAPPPPMLRGNGGSAPPPPPLGAGRSLRPRATTKLKRSTQLGNLYRTLKGKVEGSSLKGKSSGGRNTAIGARNTGGKQGMADALAEMTKRSSYFQQIEEDVQKYTKHIMELRSSITNFKTKEMTELIKFHKDVESLLEKLTDESQVLSRFEGFPSKKLEAIRMAAALFNKLDSILNELQNVNIVTPVTQVLDKIERYFNKIKTELDALERTKDEELKKFKGHNIEFDFYILVKIKEAMVDVSSNCMELALKERRINNSSDGKRKECGGKLLWRAFQFAFRVYTFAGGHDDRADKLTRELAKEIESDPNQP*