Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28073.t1 | XP_013446810.2 | 98.9 | 630 | 7 | 0 | 1 | 630 | 1 | 630 | 0.00E+00 | 1169.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28073.t1 | Q9LFU0 | 55.7 | 589 | 232 | 5 | 22 | 604 | 19 | 584 | 5.9e-152 | 539.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28073.t1 | A0A396GP87 | 98.9 | 630 | 7 | 0 | 1 | 630 | 1 | 630 | 0.0e+00 | 1169.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene28073 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene28073 | 0.878049 | 3.84E-69 | -1.69E-46 |
| MS.gene049217 | MS.gene28073 | 0.85963 | 3.62E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene28073 | 0.892402 | 1.64E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene28073 | 0.8754 | 3.17E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene28073 | 0.892358 | 1.71E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene28073 | 0.890809 | 7.04E-74 | -1.69E-46 |
| MS.gene049609 | MS.gene28073 | 0.859081 | 5.29E-63 | -1.69E-46 |
| MS.gene049615 | MS.gene28073 | 0.810803 | 9.61E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene28073 | 0.827952 | 1.18E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene28073 | 0.851062 | 1.13E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene28073 | 0.817122 | 3.88E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene28073 | 0.858879 | 6.08E-63 | -1.69E-46 |
| MS.gene05010 | MS.gene28073 | 0.878964 | 1.83E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene28073 | 0.863597 | 2.22E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene28073 | 0.853365 | 2.51E-61 | -1.69E-46 |
| MS.gene050170 | MS.gene28073 | 0.854672 | 1.05E-61 | -1.69E-46 |
| MS.gene050216 | MS.gene28073 | 0.812156 | 4.89E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene28073 | 0.87812 | 3.63E-69 | -1.69E-46 |
| MS.gene050333 | MS.gene28073 | 0.845737 | 3.37E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene28073 | -0.809464 | 1.87E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene28073 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene28073 | 0.842553 | 2.41E-58 | -1.69E-46 |
| MS.gene050502 | MS.gene28073 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene28073 | 0.897969 | 8.39E-77 | -1.69E-46 |
| MS.gene050518 | MS.gene28073 | 0.86135 | 1.09E-63 | -1.69E-46 |
| MS.gene050538 | MS.gene28073 | 0.816846 | 4.48E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene28073 | 0.905927 | 2.56E-80 | -1.69E-46 |
| MS.gene050593 | MS.gene28073 | 0.841026 | 6.10E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene28073 | 0.881423 | 2.43E-70 | -1.69E-46 |
| MS.gene050662 | MS.gene28073 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene28073 | 0.86842 | 6.62E-66 | -1.69E-46 |
| MS.gene050699 | MS.gene28073 | 0.891528 | 3.66E-74 | -1.69E-46 |
| MS.gene050747 | MS.gene28073 | 0.888429 | 5.95E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene28073 | 0.881704 | 1.92E-70 | -1.69E-46 |
| MS.gene05080 | MS.gene28073 | 0.833224 | 6.03E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene28073 | 0.872139 | 4.00E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene28073 | 0.871363 | 7.24E-67 | -1.69E-46 |
| MS.gene050876 | MS.gene28073 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene28073 | -0.806751 | 7.07E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene28073 | 0.825923 | 3.60E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene28073 | 0.879534 | 1.15E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene28073 | 0.880602 | 4.80E-70 | -1.69E-46 |
| MS.gene05100 | MS.gene28073 | 0.833646 | 4.73E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene28073 | -0.816884 | 4.39E-52 | -1.69E-46 |
| MS.gene051167 | MS.gene28073 | -0.846416 | 2.20E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene28073 | 0.839073 | 1.97E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene28073 | 0.814795 | 1.28E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene28073 | 0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene28073 | 0.863827 | 1.88E-64 | -1.69E-46 |
| MS.gene051560 | MS.gene28073 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene28073 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene28073 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene28073 | 0.850733 | 1.40E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene28073 | 0.820324 | 7.29E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene28073 | 0.83175 | 1.40E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene28073 | 0.806449 | 8.18E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene28073 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene28073 | 0.881548 | 2.19E-70 | -1.69E-46 |
| MS.gene052271 | MS.gene28073 | 0.813933 | 1.99E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene28073 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene28073 | 0.873602 | 1.29E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene28073 | 0.884578 | 1.70E-71 | -1.69E-46 |
| MS.gene052501 | MS.gene28073 | 0.825337 | 4.95E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene28073 | 0.873965 | 9.76E-68 | -1.69E-46 |
| MS.gene052504 | MS.gene28073 | 0.840714 | 7.36E-58 | -1.69E-46 |
| MS.gene052505 | MS.gene28073 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene28073 | 0.857063 | 2.11E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene28073 | 0.851572 | 8.13E-61 | -1.69E-46 |
| MS.gene052820 | MS.gene28073 | 0.822582 | 2.19E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene28073 | 0.852413 | 4.69E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene28073 | 0.876391 | 1.45E-68 | -1.69E-46 |
| MS.gene052825 | MS.gene28073 | 0.877817 | 4.63E-69 | -1.69E-46 |
| MS.gene052916 | MS.gene28073 | 0.84885 | 4.71E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene28073 | 0.838554 | 2.68E-57 | -1.69E-46 |
| MS.gene053117 | MS.gene28073 | 0.807228 | 5.60E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene28073 | 0.887056 | 1.99E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene28073 | 0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene28073 | 0.899039 | 2.94E-77 | -1.69E-46 |
| MS.gene053286 | MS.gene28073 | 0.902736 | 7.15E-79 | -1.69E-46 |
| MS.gene053322 | MS.gene28073 | 0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene28073 | -0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene28073 | 0.872908 | 2.21E-67 | -1.69E-46 |
| MS.gene053479 | MS.gene28073 | 0.829664 | 4.53E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene28073 | 0.8498 | 2.56E-60 | -1.69E-46 |
| MS.gene053549 | MS.gene28073 | -0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene28073 | 0.879698 | 1.01E-69 | -1.69E-46 |
| MS.gene053579 | MS.gene28073 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene28073 | 0.859246 | 4.72E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene28073 | 0.864209 | 1.43E-64 | -1.69E-46 |
| MS.gene053633 | MS.gene28073 | 0.820648 | 6.14E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene28073 | 0.86855 | 6.01E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene28073 | 0.829163 | 6.00E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene28073 | 0.840868 | 6.71E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene28073 | 0.857609 | 1.45E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene28073 | 0.882985 | 6.58E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene28073 | 0.857558 | 1.50E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene28073 | 0.889235 | 2.90E-73 | -1.69E-46 |
| MS.gene054706 | MS.gene28073 | -0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene28073 | 0.856825 | 2.48E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene28073 | 0.83772 | 4.40E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene28073 | 0.889117 | 3.23E-73 | -1.69E-46 |
| MS.gene05505 | MS.gene28073 | 0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene28073 | -0.821117 | 4.79E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene28073 | 0.843966 | 1.01E-58 | -1.69E-46 |
| MS.gene055212 | MS.gene28073 | 0.815556 | 8.70E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene28073 | 0.816041 | 6.78E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene28073 | 0.816655 | 4.94E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene28073 | 0.899185 | 2.55E-77 | -1.69E-46 |
| MS.gene055502 | MS.gene28073 | 0.893544 | 5.70E-75 | -1.69E-46 |
| MS.gene055577 | MS.gene28073 | 0.890296 | 1.12E-73 | -1.69E-46 |
| MS.gene055629 | MS.gene28073 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene28073 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene28073 | 0.844372 | 7.88E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene28073 | 0.847873 | 8.78E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene28073 | 0.86245 | 5.02E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene28073 | 0.847803 | 9.18E-60 | -1.69E-46 |
| MS.gene055776 | MS.gene28073 | 0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene28073 | 0.856927 | 2.31E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene28073 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene28073 | 0.867208 | 1.62E-65 | -1.69E-46 |
| MS.gene056040 | MS.gene28073 | 0.836704 | 8.01E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene28073 | 0.815987 | 6.97E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene28073 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene28073 | 0.82472 | 6.93E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene28073 | 0.87341 | 1.50E-67 | -1.69E-46 |
| MS.gene056409 | MS.gene28073 | 0.842369 | 2.70E-58 | -1.69E-46 |
| MS.gene056446 | MS.gene28073 | 0.824198 | 9.19E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene28073 | 0.815074 | 1.11E-51 | -1.69E-46 |
| MS.gene056450 | MS.gene28073 | 0.808545 | 2.94E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene28073 | 0.825775 | 3.90E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene28073 | 0.893948 | 3.90E-75 | -1.69E-46 |
| MS.gene056510 | MS.gene28073 | 0.889934 | 1.55E-73 | -1.69E-46 |
| MS.gene056549 | MS.gene28073 | 0.81694 | 4.27E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene28073 | 0.847675 | 9.95E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene28073 | 0.896616 | 3.11E-76 | -1.69E-46 |
| MS.gene05666 | MS.gene28073 | 0.808919 | 2.44E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene28073 | 0.867421 | 1.39E-65 | -1.69E-46 |
| MS.gene056878 | MS.gene28073 | 0.832763 | 7.85E-56 | -1.69E-46 |
| MS.gene056898 | MS.gene28073 | 0.808244 | 3.41E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene28073 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene28073 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene28073 | 0.841523 | 4.51E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene28073 | 0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene28073 | 0.82856 | 8.40E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene28073 | 0.881279 | 2.74E-70 | -1.69E-46 |
| MS.gene057658 | MS.gene28073 | 0.83456 | 2.79E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene28073 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene28073 | 0.871629 | 5.91E-67 | -1.69E-46 |
| MS.gene057856 | MS.gene28073 | 0.827184 | 1.80E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene28073 | 0.802588 | 5.23E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene28073 | 0.84613 | 2.64E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene28073 | 0.825352 | 4.91E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene28073 | 0.834714 | 2.56E-56 | -1.69E-46 |
| MS.gene058157 | MS.gene28073 | 0.853017 | 3.16E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene28073 | 0.822051 | 2.91E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene28073 | 0.824393 | 8.27E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene28073 | 0.870541 | 1.35E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene28073 | 0.888166 | 7.51E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene28073 | 0.870724 | 1.18E-66 | -1.69E-46 |
| MS.gene058723 | MS.gene28073 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene28073 | 0.852839 | 3.55E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene28073 | 0.859219 | 4.81E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene28073 | 0.829309 | 5.53E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene28073 | 0.887166 | 1.81E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene28073 | 0.871622 | 5.94E-67 | -1.69E-46 |
| MS.gene05913 | MS.gene28073 | 0.819787 | 9.67E-53 | -1.69E-46 |
| MS.gene059305 | MS.gene28073 | 0.806593 | 7.63E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene28073 | 0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene28073 | 0.860178 | 2.48E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene28073 | 0.804799 | 1.82E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene28073 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene28073 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene28073 | 0.824966 | 6.06E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene28073 | 0.87575 | 2.41E-68 | -1.69E-46 |
| MS.gene059718 | MS.gene28073 | 0.880229 | 6.52E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene28073 | 0.858819 | 6.34E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene28073 | 0.862603 | 4.51E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene28073 | 0.803992 | 2.68E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene28073 | 0.874888 | 4.75E-68 | -1.69E-46 |
| MS.gene06000 | MS.gene28073 | 0.859098 | 5.23E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene28073 | 0.802378 | 5.77E-49 | -1.69E-46 |
| MS.gene060295 | MS.gene28073 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene28073 | 0.859617 | 3.65E-63 | -1.69E-46 |
| MS.gene060595 | MS.gene28073 | -0.816063 | 6.71E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene28073 | 0.848279 | 6.78E-60 | -1.69E-46 |
| MS.gene060728 | MS.gene28073 | 0.807257 | 5.52E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene28073 | 0.875268 | 3.52E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene28073 | 0.863524 | 2.34E-64 | -1.69E-46 |
| MS.gene06077 | MS.gene28073 | 0.904665 | 9.68E-80 | -1.69E-46 |
| MS.gene060804 | MS.gene28073 | 0.818315 | 2.09E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene28073 | 0.835154 | 1.98E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene28073 | 0.859664 | 3.54E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene28073 | 0.888116 | 7.85E-73 | -1.69E-46 |
| MS.gene061134 | MS.gene28073 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene28073 | 0.871161 | 8.44E-67 | -1.69E-46 |
| MS.gene061171 | MS.gene28073 | 0.815506 | 8.93E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene28073 | 0.820023 | 8.54E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28073.t1 | MTR_8g090220 | 97.192 | 641 | 7 | 1 | 1 | 630 | 1 | 641 | 0.0 | 1295 |
| MS.gene28073.t1 | MTR_8g090220 | 98.814 | 506 | 6 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1048 |
| MS.gene28073.t1 | MTR_4g093850 | 42.206 | 680 | 291 | 12 | 26 | 630 | 17 | 669 | 1.74e-176 | 517 |
| MS.gene28073.t1 | MTR_2g009340 | 41.335 | 704 | 306 | 15 | 13 | 630 | 3 | 685 | 3.26e-176 | 516 |
| MS.gene28073.t1 | MTR_4g093850 | 42.915 | 494 | 205 | 8 | 26 | 461 | 17 | 491 | 7.81e-132 | 397 |
| MS.gene28073.t1 | MTR_5g016060 | 35.628 | 581 | 302 | 11 | 19 | 566 | 10 | 551 | 4.62e-117 | 362 |
| MS.gene28073.t1 | MTR_1g082690 | 34.712 | 556 | 314 | 10 | 24 | 570 | 29 | 544 | 4.14e-114 | 352 |
| MS.gene28073.t1 | MTR_5g032780 | 35.978 | 542 | 271 | 8 | 42 | 528 | 16 | 536 | 3.59e-110 | 345 |
| MS.gene28073.t1 | MTR_1g064360 | 35.078 | 516 | 283 | 10 | 41 | 533 | 15 | 501 | 1.07e-104 | 328 |
| MS.gene28073.t1 | MTR_4g022330 | 34.286 | 525 | 287 | 7 | 20 | 516 | 2 | 496 | 1.13e-104 | 330 |
| MS.gene28073.t1 | MTR_2g018750 | 33.442 | 616 | 321 | 15 | 52 | 622 | 26 | 597 | 2.34e-104 | 329 |
| MS.gene28073.t1 | MTR_1g088885 | 33.174 | 627 | 316 | 15 | 52 | 620 | 36 | 617 | 4.94e-104 | 328 |
| MS.gene28073.t1 | MTR_4g095430 | 35.963 | 545 | 274 | 11 | 52 | 559 | 13 | 519 | 1.74e-103 | 326 |
| MS.gene28073.t1 | MTR_2g084595 | 30.678 | 590 | 334 | 10 | 44 | 580 | 15 | 582 | 2.63e-103 | 327 |
| MS.gene28073.t1 | MTR_8g078900 | 35.448 | 536 | 253 | 10 | 47 | 518 | 15 | 521 | 3.84e-102 | 325 |
| MS.gene28073.t1 | MTR_5g015790 | 32.872 | 578 | 282 | 14 | 38 | 552 | 11 | 545 | 5.04e-102 | 323 |
| MS.gene28073.t1 | MTR_8g069330 | 37.238 | 478 | 257 | 6 | 55 | 511 | 29 | 484 | 1.62e-101 | 321 |
| MS.gene28073.t1 | MTR_1g014070 | 33.210 | 539 | 269 | 11 | 46 | 535 | 21 | 517 | 3.44e-101 | 321 |
| MS.gene28073.t1 | MTR_7g108290 | 34.888 | 579 | 279 | 14 | 52 | 571 | 36 | 575 | 2.53e-100 | 320 |
| MS.gene28073.t1 | MTR_1g106430 | 33.508 | 573 | 275 | 17 | 42 | 552 | 18 | 546 | 5.99e-99 | 315 |
| MS.gene28073.t1 | MTR_8g078900 | 35.838 | 519 | 240 | 10 | 64 | 518 | 2 | 491 | 1.25e-98 | 315 |
| MS.gene28073.t1 | MTR_1g094850 | 31.281 | 601 | 319 | 12 | 52 | 600 | 26 | 584 | 4.87e-98 | 313 |
| MS.gene28073.t1 | MTR_8g078900 | 37.634 | 465 | 216 | 8 | 99 | 518 | 46 | 481 | 2.25e-97 | 311 |
| MS.gene28073.t1 | MTR_7g073980 | 35.800 | 500 | 268 | 8 | 42 | 516 | 23 | 494 | 8.27e-97 | 310 |
| MS.gene28073.t1 | MTR_3g062540 | 31.757 | 592 | 344 | 13 | 52 | 630 | 24 | 568 | 1.64e-92 | 296 |
| MS.gene28073.t1 | MTR_4g134210 | 34.898 | 490 | 271 | 8 | 45 | 515 | 19 | 479 | 3.49e-91 | 294 |
| MS.gene28073.t1 | MTR_5g016060 | 35.760 | 467 | 240 | 8 | 129 | 566 | 2 | 437 | 3.75e-89 | 286 |
| MS.gene28073.t1 | MTR_5g075640 | 32.500 | 520 | 314 | 7 | 52 | 561 | 25 | 517 | 1.20e-87 | 284 |
| MS.gene28073.t1 | MTR_3g062540 | 31.643 | 572 | 331 | 13 | 72 | 630 | 2 | 526 | 2.27e-86 | 279 |
| MS.gene28073.t1 | MTR_2g027410 | 32.505 | 523 | 279 | 12 | 35 | 532 | 8 | 481 | 3.83e-84 | 275 |
| MS.gene28073.t1 | MTR_2g048390 | 33.333 | 465 | 247 | 7 | 37 | 460 | 10 | 452 | 1.79e-82 | 267 |
| MS.gene28073.t1 | MTR_5g075640 | 32.200 | 500 | 302 | 7 | 72 | 561 | 2 | 474 | 3.61e-80 | 263 |
| MS.gene28073.t1 | MTR_2g084595 | 30.617 | 454 | 257 | 7 | 44 | 461 | 15 | 446 | 1.18e-76 | 251 |
| MS.gene28073.t1 | MTR_8g078900 | 33.194 | 479 | 227 | 10 | 47 | 461 | 15 | 464 | 7.27e-76 | 250 |
| MS.gene28073.t1 | MTR_2g027410 | 32.230 | 453 | 243 | 9 | 100 | 532 | 1 | 409 | 1.92e-72 | 242 |
| MS.gene28073.t1 | MTR_8g078900 | 35.294 | 408 | 190 | 8 | 99 | 461 | 46 | 424 | 2.98e-71 | 236 |
| MS.gene28073.t1 | MTR_4g011530 | 30.394 | 431 | 241 | 8 | 215 | 620 | 46 | 442 | 2.91e-66 | 224 |
| MS.gene28073.t1 | MTR_2g102730 | 37.793 | 299 | 157 | 5 | 215 | 512 | 24 | 294 | 8.80e-63 | 214 |
| MS.gene28073.t1 | MTR_4g074190 | 26.296 | 521 | 276 | 12 | 95 | 559 | 3 | 471 | 8.05e-48 | 175 |
| MS.gene28073.t1 | MTR_4g074190 | 26.296 | 521 | 276 | 12 | 95 | 559 | 49 | 517 | 1.93e-47 | 175 |
| MS.gene28073.t1 | MTR_1g035720 | 24.698 | 579 | 318 | 18 | 55 | 574 | 6 | 525 | 6.50e-43 | 162 |
| MS.gene28073.t1 | MTR_4g045767 | 25.277 | 451 | 247 | 11 | 97 | 513 | 50 | 444 | 8.99e-40 | 153 |
| MS.gene28073.t1 | MTR_4g074190 | 25.537 | 419 | 211 | 10 | 95 | 462 | 49 | 417 | 7.34e-35 | 137 |
| MS.gene28073.t1 | MTR_2g010890 | 23.333 | 450 | 270 | 12 | 119 | 542 | 1 | 401 | 1.42e-28 | 119 |
| MS.gene28073.t1 | MTR_1g105870 | 30.841 | 214 | 118 | 5 | 59 | 259 | 38 | 234 | 1.37e-27 | 112 |
| MS.gene28073.t1 | MTR_2g048375 | 31.579 | 133 | 79 | 2 | 477 | 599 | 1 | 131 | 4.55e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28073.t1 | AT5G10250 | 58.185 | 617 | 237 | 8 | 22 | 630 | 19 | 622 | 0.0 | 695 |
| MS.gene28073.t1 | AT5G10250 | 57.050 | 617 | 229 | 8 | 22 | 630 | 19 | 607 | 0.0 | 676 |
| MS.gene28073.t1 | AT5G64330 | 38.784 | 691 | 257 | 10 | 44 | 593 | 44 | 709 | 5.39e-160 | 477 |
| MS.gene28073.t1 | AT5G64330 | 41.385 | 592 | 203 | 8 | 44 | 516 | 44 | 610 | 7.09e-153 | 456 |
| MS.gene28073.t1 | AT5G64330 | 41.623 | 567 | 187 | 8 | 69 | 516 | 10 | 551 | 2.03e-145 | 435 |
| MS.gene28073.t1 | AT5G67385 | 37.474 | 483 | 252 | 7 | 52 | 514 | 25 | 477 | 2.44e-111 | 347 |
| MS.gene28073.t1 | AT5G48800 | 34.893 | 513 | 258 | 5 | 34 | 516 | 23 | 489 | 3.58e-104 | 328 |
| MS.gene28073.t1 | AT5G03250 | 34.007 | 594 | 307 | 14 | 54 | 599 | 28 | 584 | 6.37e-104 | 327 |
| MS.gene28073.t1 | AT1G03010 | 34.345 | 626 | 302 | 16 | 52 | 606 | 9 | 596 | 2.26e-103 | 326 |
| MS.gene28073.t1 | AT5G67385 | 37.662 | 462 | 238 | 7 | 73 | 514 | 1 | 432 | 4.59e-103 | 324 |
| MS.gene28073.t1 | AT5G67385 | 37.662 | 462 | 238 | 7 | 73 | 514 | 1 | 432 | 4.59e-103 | 324 |
| MS.gene28073.t1 | AT5G67385 | 37.662 | 462 | 238 | 7 | 73 | 514 | 1 | 432 | 4.59e-103 | 324 |
| MS.gene28073.t1 | AT5G67385 | 37.662 | 462 | 238 | 7 | 73 | 514 | 1 | 432 | 4.59e-103 | 324 |
| MS.gene28073.t1 | AT1G30440 | 34.109 | 516 | 271 | 7 | 47 | 516 | 21 | 513 | 5.23e-103 | 327 |
| MS.gene28073.t1 | AT1G03010 | 34.888 | 579 | 286 | 11 | 52 | 571 | 36 | 582 | 6.24e-103 | 326 |
| MS.gene28073.t1 | AT1G03010 | 33.923 | 622 | 310 | 14 | 52 | 606 | 35 | 622 | 6.62e-103 | 326 |
| MS.gene28073.t1 | AT5G13600 | 33.786 | 589 | 293 | 16 | 44 | 581 | 18 | 560 | 2.41e-102 | 323 |
| MS.gene28073.t1 | AT2G47860 | 33.449 | 577 | 286 | 10 | 52 | 571 | 37 | 572 | 2.98e-100 | 319 |
| MS.gene28073.t1 | AT5G67440 | 35.887 | 496 | 248 | 10 | 46 | 511 | 21 | 476 | 5.25e-100 | 317 |
| MS.gene28073.t1 | AT5G67440 | 35.887 | 496 | 248 | 10 | 46 | 511 | 21 | 476 | 5.25e-100 | 317 |
| MS.gene28073.t1 | AT3G44820 | 31.795 | 585 | 320 | 12 | 47 | 571 | 18 | 583 | 1.09e-97 | 313 |
| MS.gene28073.t1 | AT2G14820 | 33.774 | 530 | 263 | 11 | 38 | 521 | 11 | 498 | 6.74e-97 | 310 |
| MS.gene28073.t1 | AT2G14820 | 33.774 | 530 | 263 | 11 | 38 | 521 | 11 | 498 | 6.74e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT1G67900 | 33.333 | 558 | 278 | 9 | 42 | 540 | 16 | 538 | 8.95e-97 | 310 |
| MS.gene28073.t1 | AT2G47860 | 33.054 | 596 | 286 | 12 | 52 | 571 | 37 | 595 | 1.07e-96 | 310 |
| MS.gene28073.t1 | AT3G08570 | 33.394 | 554 | 290 | 11 | 52 | 561 | 34 | 552 | 4.08e-96 | 308 |
| MS.gene28073.t1 | AT5G67440 | 35.714 | 476 | 236 | 10 | 66 | 511 | 4 | 439 | 9.66e-94 | 299 |
| MS.gene28073.t1 | AT3G49970 | 36.219 | 439 | 232 | 9 | 60 | 496 | 2 | 394 | 1.16e-93 | 298 |
| MS.gene28073.t1 | AT3G49970 | 36.219 | 439 | 232 | 9 | 60 | 496 | 2 | 394 | 1.16e-93 | 298 |
| MS.gene28073.t1 | AT3G50840 | 31.616 | 563 | 330 | 10 | 47 | 587 | 11 | 540 | 1.40e-92 | 297 |
| MS.gene28073.t1 | AT2G30520 | 34.447 | 479 | 274 | 8 | 52 | 520 | 30 | 478 | 2.16e-92 | 297 |
| MS.gene28073.t1 | AT3G08660 | 31.379 | 580 | 321 | 12 | 52 | 605 | 34 | 562 | 3.41e-92 | 296 |
| MS.gene28073.t1 | AT4G37590 | 32.021 | 559 | 282 | 14 | 38 | 552 | 11 | 515 | 1.81e-90 | 292 |
| MS.gene28073.t1 | AT5G66560 | 32.852 | 554 | 256 | 11 | 47 | 516 | 14 | 535 | 1.92e-90 | 294 |
| MS.gene28073.t1 | AT3G26490 | 33.148 | 540 | 249 | 10 | 43 | 515 | 17 | 511 | 4.01e-89 | 288 |
| MS.gene28073.t1 | AT3G26490 | 33.148 | 540 | 249 | 10 | 43 | 515 | 17 | 511 | 4.01e-89 | 288 |
| MS.gene28073.t1 | AT3G26490 | 33.148 | 540 | 249 | 10 | 43 | 515 | 17 | 511 | 4.01e-89 | 288 |
| MS.gene28073.t1 | AT4G31820 | 32.934 | 501 | 248 | 12 | 46 | 511 | 21 | 468 | 2.68e-88 | 286 |
| MS.gene28073.t1 | AT5G66560 | 35.637 | 463 | 225 | 9 | 95 | 516 | 66 | 496 | 8.95e-88 | 286 |
| MS.gene28073.t1 | AT5G66560 | 35.637 | 463 | 225 | 9 | 95 | 516 | 76 | 506 | 1.10e-87 | 286 |
| MS.gene28073.t1 | AT3G08660 | 31.618 | 544 | 297 | 10 | 88 | 605 | 8 | 502 | 1.13e-87 | 283 |
| MS.gene28073.t1 | AT5G47800 | 32.449 | 490 | 276 | 10 | 43 | 509 | 17 | 474 | 4.25e-85 | 277 |
| MS.gene28073.t1 | AT5G47800 | 32.449 | 490 | 276 | 10 | 43 | 509 | 17 | 474 | 4.25e-85 | 277 |
| MS.gene28073.t1 | AT5G47800 | 32.449 | 490 | 276 | 10 | 43 | 509 | 17 | 474 | 4.25e-85 | 277 |
| MS.gene28073.t1 | AT2G30520 | 34.205 | 459 | 262 | 8 | 72 | 520 | 2 | 430 | 5.08e-85 | 276 |
| MS.gene28073.t1 | AT2G30520 | 34.205 | 459 | 262 | 8 | 72 | 520 | 2 | 430 | 5.08e-85 | 276 |
| MS.gene28073.t1 | AT3G50840 | 32.039 | 515 | 295 | 10 | 95 | 587 | 23 | 504 | 1.54e-84 | 275 |
| MS.gene28073.t1 | AT3G50840 | 32.039 | 515 | 295 | 10 | 95 | 587 | 23 | 504 | 1.54e-84 | 275 |
| MS.gene28073.t1 | AT5G47800 | 32.449 | 490 | 276 | 10 | 43 | 509 | 130 | 587 | 1.46e-83 | 276 |
| MS.gene28073.t1 | AT4G31820 | 33.929 | 448 | 209 | 11 | 99 | 511 | 20 | 415 | 4.98e-81 | 265 |
| MS.gene28073.t1 | AT2G23050 | 31.452 | 496 | 262 | 9 | 41 | 515 | 16 | 454 | 6.49e-81 | 264 |
| MS.gene28073.t1 | AT5G03250 | 32.617 | 512 | 255 | 14 | 138 | 599 | 1 | 472 | 2.03e-75 | 249 |
| MS.gene28073.t1 | AT2G47860 | 33.705 | 448 | 219 | 8 | 52 | 461 | 37 | 444 | 4.40e-75 | 247 |
| MS.gene28073.t1 | AT2G47860 | 32.179 | 491 | 239 | 9 | 138 | 571 | 1 | 454 | 6.65e-72 | 241 |
| MS.gene28073.t1 | AT2G47860 | 32.179 | 491 | 239 | 9 | 138 | 571 | 1 | 454 | 6.65e-72 | 241 |
| MS.gene28073.t1 | AT2G47860 | 33.191 | 467 | 219 | 10 | 52 | 461 | 37 | 467 | 1.21e-71 | 239 |
| MS.gene28073.t1 | AT1G52770 | 33.417 | 398 | 214 | 8 | 197 | 572 | 10 | 378 | 3.02e-70 | 235 |
| MS.gene28073.t1 | AT3G26490 | 31.481 | 486 | 221 | 10 | 43 | 461 | 17 | 457 | 2.13e-68 | 231 |
| MS.gene28073.t1 | AT3G08660 | 31.494 | 435 | 235 | 8 | 52 | 468 | 34 | 423 | 2.18e-67 | 226 |
| MS.gene28073.t1 | AT5G66560 | 30.321 | 498 | 231 | 11 | 47 | 460 | 14 | 479 | 2.82e-64 | 219 |
| MS.gene28073.t1 | AT3G15570 | 35.599 | 309 | 160 | 5 | 215 | 512 | 29 | 309 | 5.30e-61 | 210 |
| MS.gene28073.t1 | AT3G19850 | 29.194 | 459 | 238 | 9 | 94 | 510 | 51 | 464 | 7.33e-57 | 201 |
| MS.gene28073.t1 | AT2G23050 | 30.380 | 395 | 201 | 8 | 138 | 515 | 1 | 338 | 5.28e-56 | 194 |
| MS.gene28073.t1 | AT5G48130 | 26.978 | 493 | 279 | 10 | 52 | 518 | 39 | 476 | 4.95e-55 | 198 |
| MS.gene28073.t1 | AT1G50280 | 27.074 | 458 | 260 | 9 | 95 | 518 | 18 | 435 | 3.40e-44 | 165 |
| MS.gene28073.t1 | AT1G50280 | 27.074 | 458 | 260 | 9 | 95 | 518 | 51 | 468 | 4.43e-44 | 165 |
| MS.gene28073.t1 | AT3G03510 | 27.494 | 451 | 258 | 13 | 107 | 549 | 8 | 397 | 5.32e-40 | 152 |
| MS.gene28073.t1 | AT5G17580 | 25.904 | 498 | 295 | 12 | 42 | 513 | 10 | 459 | 9.10e-39 | 151 |
| MS.gene28073.t1 | AT5G17580 | 27.146 | 431 | 250 | 10 | 105 | 513 | 56 | 444 | 2.93e-38 | 149 |
| MS.gene28073.t1 | AT3G22104 | 25.664 | 452 | 248 | 12 | 76 | 496 | 26 | 420 | 6.04e-35 | 139 |
| MS.gene28073.t1 | AT3G22104 | 24.561 | 399 | 217 | 9 | 125 | 496 | 4 | 345 | 3.60e-27 | 115 |
| MS.gene28073.t1 | AT3G22104 | 24.561 | 399 | 217 | 9 | 125 | 496 | 4 | 345 | 3.60e-27 | 115 |
| MS.gene28073.t1 | AT3G22104 | 24.561 | 399 | 217 | 9 | 125 | 496 | 4 | 345 | 3.60e-27 | 115 |
Find 127 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTGTCAGACTGACTTTC+AGG | 0.132980 | 4.4:+10725438 | None:intergenic |
| CACAGCATCTTCTAACAATT+TGG | 0.179939 | 4.4:+10724155 | None:intergenic |
| CTCCAGCCTGATAGATTCTT+TGG | 0.216318 | 4.4:+10721835 | None:intergenic |
| GAGGAGGAATTATGCTTATT+AGG | 0.225056 | 4.4:+10723801 | None:intergenic |
| ATTCAATATTAGTAGGCTTT+TGG | 0.241298 | 4.4:-10723310 | MS.gene28073:CDS |
| CATTTGTCGTGCTTTCTTCA+TGG | 0.250887 | 4.4:-10724237 | MS.gene28073:CDS |
| CAGCCTCTAATCTCAAATTC+TGG | 0.250919 | 4.4:-10724451 | MS.gene28073:CDS |
| TGCGGATAATTTCAGCAATT+AGG | 0.253941 | 4.4:-10724021 | MS.gene28073:CDS |
| AACATTGTAATTGAAAGATT+TGG | 0.268935 | 4.4:+10723258 | None:intergenic |
| TTCCCAGAATTTGAGATTAG+AGG | 0.277466 | 4.4:+10724448 | None:intergenic |
| AAGCTGGTGGTTCGATGATT+TGG | 0.289085 | 4.4:-10724068 | MS.gene28073:CDS |
| GACTTTCAGGGTCTTGTGCT+TGG | 0.289224 | 4.4:+10725451 | None:intergenic |
| GCGGATAATTTCAGCAATTA+GGG | 0.291903 | 4.4:-10724020 | MS.gene28073:CDS |
| TTAGAAGGGCTTAGAGGATA+TGG | 0.292438 | 4.4:-10723917 | MS.gene28073:CDS |
| CTCAAACTTGAAAACTTTCC+AGG | 0.292504 | 4.4:-10724421 | MS.gene28073:CDS |
| TATCAGGCTGGAGTTTAAAT+TGG | 0.321879 | 4.4:-10721825 | MS.gene28073:CDS |
| GCACATTATAAGTGGTTTCC+TGG | 0.326824 | 4.4:+10725135 | None:intergenic |
| TGTCTATAGTTTCAGATGTC+TGG | 0.334509 | 4.4:+10721968 | None:intergenic |
| ACCTGGACAACTGTTCTTAG+AGG | 0.338185 | 4.4:+10722941 | None:intergenic |
| ACTTTCAGGGTCTTGTGCTT+GGG | 0.351122 | 4.4:+10725452 | None:intergenic |
| CCTACTAATATTGAATTTCC+CGG | 0.364748 | 4.4:+10723317 | None:intergenic |
| GAGGAGTTAGAAGGGCTTAG+AGG | 0.370662 | 4.4:-10723923 | MS.gene28073:CDS |
| ACAATTCTAAAATTCTGTTA+TGG | 0.376842 | 4.4:-10724379 | MS.gene28073:CDS |
| TGCAGAGTCTTCTACGGTCT+TGG | 0.377991 | 4.4:+10723029 | None:intergenic |
| TTCTACGGTCTTGGTCAGTT+AGG | 0.381517 | 4.4:+10723038 | None:intergenic |
| CCGGGAAATTCAATATTAGT+AGG | 0.395757 | 4.4:-10723317 | MS.gene28073:CDS |
| AATTACAATGTTCCAAGTCT+TGG | 0.396137 | 4.4:-10723247 | MS.gene28073:CDS |
| TTTACCAATGATCTCTGGTT+TGG | 0.398294 | 4.4:+10723988 | None:intergenic |
| GATGCTGCATCCTCACTTGC+GGG | 0.402710 | 4.4:+10724100 | None:intergenic |
| GACAAACCAAAGAATCTATC+AGG | 0.413587 | 4.4:-10721841 | MS.gene28073:CDS |
| ACACGGAGAGCCTTCTTCTC+GGG | 0.418325 | 4.4:+10721701 | None:intergenic |
| TCTAACTCCTCATACATTCC+TGG | 0.422868 | 4.4:+10723935 | None:intergenic |
| GACCTTTAGGTAGGTGTCAA+TGG | 0.427446 | 4.4:+10723173 | None:intergenic |
| TTAATTCCTAGATATCAAAA+TGG | 0.429080 | 4.4:-10723641 | MS.gene28073:CDS |
| AGCCTCTAATCTCAAATTCT+GGG | 0.431924 | 4.4:-10724450 | MS.gene28073:CDS |
| ATGCAACTGCAACAAAAGTC+CGG | 0.435207 | 4.4:-10723336 | MS.gene28073:CDS |
| GACACGGAGAGCCTTCTTCT+CGG | 0.443418 | 4.4:+10721700 | None:intergenic |
| TTATCCGAGTTGAAGTCTAT+AGG | 0.445995 | 4.4:+10724352 | None:intergenic |
| TATCCGAGTTGAAGTCTATA+GGG | 0.446756 | 4.4:+10724353 | None:intergenic |
| CTTGAATTGAAAAGTCTGTT+GGG | 0.449484 | 4.4:+10725159 | None:intergenic |
| TTCTGTCAGACTGACTTTCA+GGG | 0.449988 | 4.4:+10725439 | None:intergenic |
| TCTACGGTCTTGGTCAGTTA+GGG | 0.449995 | 4.4:+10723039 | None:intergenic |
| TCCTTCCATGTAAAACCAAC+AGG | 0.451380 | 4.4:-10721787 | MS.gene28073:CDS |
| ATACATTTACCAATGATCTC+TGG | 0.452219 | 4.4:+10723983 | None:intergenic |
| AAGTGGAATCAACTCTCAAC+AGG | 0.453660 | 4.4:-10721998 | MS.gene28073:CDS |
| TACCTTGTGCACATTATAAG+TGG | 0.465167 | 4.4:+10725127 | None:intergenic |
| GGAATGTATGAGGAGTTAGA+AGG | 0.465676 | 4.4:-10723932 | MS.gene28073:CDS |
| TATCTAGTTTCACCTCCTGT+TGG | 0.466218 | 4.4:+10721772 | None:intergenic |
| CTTGGTCAGTTAGGGAAGGA+TGG | 0.466551 | 4.4:+10723047 | None:intergenic |
| AGCTATTGTGACATGTTTGT+TGG | 0.475232 | 4.4:+10725383 | None:intergenic |
| TGAAATGATCGAGTATGTTC+TGG | 0.476508 | 4.4:+10723213 | None:intergenic |
| ACTTGAATTGAAAAGTCTGT+TGG | 0.476835 | 4.4:+10725158 | None:intergenic |
| ATTTCAGCAATTAGGGCAAA+GGG | 0.478066 | 4.4:-10724013 | MS.gene28073:CDS |
| ATATCAAAATGCGGCTACAT+AGG | 0.478687 | 4.4:-10724487 | MS.gene28073:CDS |
| ACAGGAGGTGAAACTAGATA+TGG | 0.492646 | 4.4:-10721769 | MS.gene28073:CDS |
| ATCTGCAACAAGAACTTACA+TGG | 0.493501 | 4.4:+10723764 | None:intergenic |
| GCCTCTAAGAACAGTTGTCC+AGG | 0.494899 | 4.4:-10722942 | MS.gene28073:intron |
| GCTATTGTGACATGTTTGTT+GGG | 0.495372 | 4.4:+10725384 | None:intergenic |
| ACGAGTGTGGTTTGGTGATG+TGG | 0.497567 | 4.4:+10721735 | None:intergenic |
| GATGCTGTGATTCTATAGCT+TGG | 0.503818 | 4.4:-10724141 | MS.gene28073:CDS |
| TGTGAGGAAAGCTTCAGTCT+TGG | 0.507277 | 4.4:+10724258 | None:intergenic |
| GGAACCAAACCAGAGATCAT+TGG | 0.508422 | 4.4:-10723992 | MS.gene28073:CDS |
| GCAGTAATTCAGCCAAGACT+TGG | 0.511171 | 4.4:+10723235 | None:intergenic |
| GATCTACGACGAGTGTGGTT+TGG | 0.513023 | 4.4:+10721727 | None:intergenic |
| CTTGTTGCAGATGCTAAAGA+TGG | 0.513993 | 4.4:-10723753 | MS.gene28073:CDS |
| GAAAAGTCTGTTGGGATTCG+AGG | 0.514401 | 4.4:+10725167 | None:intergenic |
| AGCAATGCAAGAGAAGGAAC+CGG | 0.515645 | 4.4:-10722025 | MS.gene28073:CDS |
| CATTCCTGGTAGCCATCTCT+TGG | 0.516344 | 4.4:+10723949 | None:intergenic |
| CTGTGATTCTATAGCTTGGA+AGG | 0.517789 | 4.4:-10724137 | MS.gene28073:CDS |
| TCAGACCTTGAAAAGAGAGT+TGG | 0.522254 | 4.4:-10723698 | MS.gene28073:CDS |
| CAGGCTGGAGTTTAAATTGG+CGG | 0.523456 | 4.4:-10721822 | MS.gene28073:CDS |
| TAGAAGGGCTTAGAGGATAT+GGG | 0.526409 | 4.4:-10723916 | MS.gene28073:CDS |
| GTAGATCAGCCCCGAGAAGA+AGG | 0.527618 | 4.4:-10721711 | MS.gene28073:CDS |
| CTTGTGAAAATCTATCTCCA+TGG | 0.528028 | 4.4:-10724189 | MS.gene28073:CDS |
| CCTTGAAAAGAGAGTTGGTA+TGG | 0.528846 | 4.4:-10723693 | MS.gene28073:CDS |
| AACCAAAGAATCTATCAGGC+TGG | 0.531250 | 4.4:-10721837 | MS.gene28073:CDS |
| AGATATCAAAATGGAGGTCA+AGG | 0.533332 | 4.4:-10723632 | MS.gene28073:CDS |
| TGCAACTGCAACAAAAGTCC+GGG | 0.536493 | 4.4:-10723335 | MS.gene28073:CDS |
| TTGGTCAGTTAGGGAAGGAT+GGG | 0.536654 | 4.4:+10723048 | None:intergenic |
| AATTTCAGCAATTAGGGCAA+AGG | 0.537477 | 4.4:-10724014 | MS.gene28073:CDS |
| AAAAGTCTGTTGGGATTCGA+GGG | 0.537749 | 4.4:+10725168 | None:intergenic |
| AAACATGAAATCACTTCAAG+TGG | 0.548709 | 4.4:-10725475 | None:intergenic |
| AGATGCTGCATCCTCACTTG+CGG | 0.555801 | 4.4:+10724099 | None:intergenic |
| TTGTGAAAATCTATCTCCAT+GGG | 0.559597 | 4.4:-10724188 | MS.gene28073:CDS |
| TAAAAGGCTGACCTTTAGGT+AGG | 0.562453 | 4.4:+10723164 | None:intergenic |
| GAGAGCAGCAATGCAAGAGA+AGG | 0.563979 | 4.4:-10722031 | MS.gene28073:CDS |
| TATGCCAAGAGATGGCTACC+AGG | 0.565928 | 4.4:-10723953 | MS.gene28073:CDS |
| ATGACTGAAGAACTAGAAGA+TGG | 0.572238 | 4.4:-10724292 | MS.gene28073:CDS |
| GATCTGTTGCAACTTCAGCT+AGG | 0.573474 | 4.4:+10723280 | None:intergenic |
| CAGCATCTAATCAAGAAAGC+TGG | 0.575400 | 4.4:-10724084 | MS.gene28073:CDS |
| GTTCTGCAGTTCTACCATGT+TGG | 0.579053 | 4.4:+10721909 | None:intergenic |
| GAGTTGATTCCACTTTGTGC+CGG | 0.581941 | 4.4:+10722006 | None:intergenic |
| CACGGAGAGCCTTCTTCTCG+GGG | 0.584375 | 4.4:+10721702 | None:intergenic |
| ATGGCTACCAGGAATGTATG+AGG | 0.585069 | 4.4:-10723942 | MS.gene28073:CDS |
| TCAAATGTTTCACATCCACC+TGG | 0.585855 | 4.4:+10724403 | None:intergenic |
| AGCCATTGACACCTACCTAA+AGG | 0.587167 | 4.4:-10723175 | MS.gene28073:intron |
| TCATGCAATATGCCAAGAGA+TGG | 0.594644 | 4.4:-10723961 | MS.gene28073:CDS |
| CATGGGACAGCATCTTGTTG+AGG | 0.601532 | 4.4:+10723782 | None:intergenic |
| AGAGAGCACTAGACATAGCA+AGG | 0.603854 | 4.4:-10723846 | MS.gene28073:CDS |
| CGAGTGTGGTTTGGTGATGT+GGG | 0.605082 | 4.4:+10721736 | None:intergenic |
| GGGCTTAGAGGATATGGGCA+TGG | 0.605115 | 4.4:-10723911 | MS.gene28073:CDS |
| GAATGTATGAGGAGTTAGAA+GGG | 0.605950 | 4.4:-10723931 | MS.gene28073:CDS |
| CGGTCTTGGTCAGTTAGGGA+AGG | 0.612259 | 4.4:+10723043 | None:intergenic |
| CATAAAATGATCAATGCGGA+GGG | 0.617020 | 4.4:+10724042 | None:intergenic |
| GGGACAGCATCTTGTTGAGG+AGG | 0.618679 | 4.4:+10723785 | None:intergenic |
| GAGAAGGAACCGGCACAAAG+TGG | 0.620698 | 4.4:-10722015 | MS.gene28073:CDS |
| ATTCCTAGATATCAAAATGG+AGG | 0.624406 | 4.4:-10723638 | MS.gene28073:CDS |
| AAAATGATCAATGCGGAGGG+TGG | 0.627548 | 4.4:+10724045 | None:intergenic |
| CAAAATGCGGCTACATAGGA+CGG | 0.632260 | 4.4:-10724483 | MS.gene28073:CDS |
| ATGCGGCTACATAGGACGGT+CGG | 0.639956 | 4.4:-10724479 | MS.gene28073:CDS |
| GCATAAAATGATCAATGCGG+AGG | 0.642568 | 4.4:+10724041 | None:intergenic |
| AAACTTGAAAACTTTCCAGG+TGG | 0.646296 | 4.4:-10724418 | MS.gene28073:CDS |
| AAGAAAGCACGACAAATGTG+AGG | 0.659530 | 4.4:+10724242 | None:intergenic |
| CATCTAATCAAGAAAGCTGG+TGG | 0.660897 | 4.4:-10724081 | MS.gene28073:CDS |
| AACCACTTATAATGTGCACA+AGG | 0.667560 | 4.4:-10725129 | MS.gene28073:intron |
| CCTCCCTATAGACTTCAACT+CGG | 0.675286 | 4.4:-10724356 | MS.gene28073:CDS |
| GGGCTGATCTACGACGAGTG+TGG | 0.675575 | 4.4:+10721722 | None:intergenic |
| CCGAGTTGAAGTCTATAGGG+AGG | 0.687521 | 4.4:+10724356 | None:intergenic |
| TCTGCAACAAGAACTTACAT+GGG | 0.692050 | 4.4:+10723765 | None:intergenic |
| AAAGTCTGTTGGGATTCGAG+GGG | 0.692715 | 4.4:+10725169 | None:intergenic |
| TTCCATGTAAAACCAACAGG+AGG | 0.698959 | 4.4:-10721784 | MS.gene28073:CDS |
| GGAGAATGTAAAGTCCAACA+TGG | 0.699643 | 4.4:-10721923 | MS.gene28073:CDS |
| TACCCCTTGATATCAAAATG+CGG | 0.703247 | 4.4:-10724496 | MS.gene28073:CDS |
| TCCGCATAAAATGATCAATG+CGG | 0.719094 | 4.4:+10724038 | None:intergenic |
| TATGGTGTTAGAAGATGCTG+AGG | 0.726855 | 4.4:-10723675 | MS.gene28073:CDS |
| CATACTCGATCATTTCACGA+TGG | 0.744904 | 4.4:-10723207 | MS.gene28073:CDS |
| AAGACATAGATGTAGTACAA+CGG | 0.746121 | 4.4:-10723395 | MS.gene28073:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTATCTTATTAAAAA+TGG | + | chr4.4:10724913-10724932 | None:intergenic | 10.0% |
| !! | TTTAACTGCATAAAATATAA+AGG | + | chr4.4:10721855-10721874 | None:intergenic | 15.0% |
| !!! | TATTTTCTCTGTTTATTTTT+TGG | - | chr4.4:10721952-10721971 | MS.gene28073:CDS | 15.0% |
| !!! | TTTATATTTTTCCATTTGTA+AGG | + | chr4.4:10724614-10724633 | None:intergenic | 15.0% |
| !! | AACATTGTAATTGAAAGATT+TGG | + | chr4.4:10723912-10723931 | None:intergenic | 20.0% |
| !! | AATATAAAGGATTCTATTTC+TGG | + | chr4.4:10721842-10721861 | None:intergenic | 20.0% |
| !! | ACAAGAAAATAGGAATTAAA+AGG | + | chr4.4:10724022-10724041 | None:intergenic | 20.0% |
| !! | ACTCATACAAAAATAACTAT+TGG | + | chr4.4:10721928-10721947 | None:intergenic | 20.0% |
| !! | CAACATATAAAAGATTAAGT+TGG | + | chr4.4:10722632-10722651 | None:intergenic | 20.0% |
| !! | TATCTTATTAAAAATGGAGT+TGG | + | chr4.4:10724907-10724926 | None:intergenic | 20.0% |
| !! | TGCGAAAAATAAAAAATAAC+CGG | - | chr4.4:10723643-10723662 | MS.gene28073:CDS | 20.0% |
| !! | TTAATTCCTAGATATCAAAA+TGG | - | chr4.4:10723526-10723545 | MS.gene28073:intron | 20.0% |
| !!! | AATGATTTTCTGCATTTATA+AGG | + | chr4.4:10722084-10722103 | None:intergenic | 20.0% |
| !!! | ACAATTCTAAAATTCTGTTA+TGG | - | chr4.4:10722788-10722807 | MS.gene28073:intron | 20.0% |
| !!! | ATATAAAGGATTCTATTTCT+GGG | + | chr4.4:10721841-10721860 | None:intergenic | 20.0% |
| !!! | CAACTTAATCTTTTATATGT+TGG | - | chr4.4:10722630-10722649 | MS.gene28073:intron | 20.0% |
| !!! | GATTTCTTTTTCAAAGTTAA+AGG | + | chr4.4:10724487-10724506 | None:intergenic | 20.0% |
| !!! | TGGTTTTCAAAAAAATTCTA+AGG | + | chr4.4:10722535-10722554 | None:intergenic | 20.0% |
| !!! | TTTTATTTCTAAATCACAGT+AGG | + | chr4.4:10724772-10724791 | None:intergenic | 20.0% |
| ! | AAAGAAGAAACTTCTTTAGA+AGG | - | chr4.4:10724550-10724569 | MS.gene28073:intron | 25.0% |
| ! | AAGATAGAAATTAGTGTCTT+TGG | + | chr4.4:10723685-10723704 | None:intergenic | 25.0% |
| ! | CCAGAATTAGAATAAAAACA+TGG | - | chr4.4:10722552-10722571 | MS.gene28073:intron | 25.0% |
| ! | GAAAAATAAAAAATAACCGG+AGG | - | chr4.4:10723646-10723665 | MS.gene28073:CDS | 25.0% |
| ! | GCATAAAAAATGAACATTCA+AGG | - | chr4.4:10721811-10721830 | MS.gene28073:CDS | 25.0% |
| ! | GGAATTCTTAAAACTCTATT+TGG | + | chr4.4:10724308-10724327 | None:intergenic | 25.0% |
| ! | TGAATTGAACACAAGAAAAT+AGG | + | chr4.4:10724032-10724051 | None:intergenic | 25.0% |
| !! | ATTCAATATTAGTAGGCTTT+TGG | - | chr4.4:10723857-10723876 | MS.gene28073:CDS | 25.0% |
| !! | TATTTTCTTGTGTTCAATTC+AGG | - | chr4.4:10724031-10724050 | MS.gene28073:CDS | 25.0% |
| !!! | CCATGTTTTTATTCTAATTC+TGG | + | chr4.4:10722555-10722574 | None:intergenic | 25.0% |
| !!! | CTCTGTTTATTTTTTGGTTT+GGG | - | chr4.4:10721958-10721977 | MS.gene28073:CDS | 25.0% |
| !!! | TCTCTGTTTATTTTTTGGTT+TGG | - | chr4.4:10721957-10721976 | MS.gene28073:CDS | 25.0% |
| !!! | TGTCATCATTTTTTTCTTCA+TGG | + | chr4.4:10724329-10724348 | None:intergenic | 25.0% |
| !!! | TTTTTTATTTTTCGCAGAGT+TGG | + | chr4.4:10723639-10723658 | None:intergenic | 25.0% |
| AAGACATAGATGTAGTACAA+CGG | - | chr4.4:10723772-10723791 | MS.gene28073:CDS | 30.0% | |
| AATTACAATGTTCCAAGTCT+TGG | - | chr4.4:10723920-10723939 | MS.gene28073:CDS | 30.0% | |
| AATTCCACAAAACAACATTG+TGG | - | chr4.4:10724931-10724950 | MS.gene28073:intron | 30.0% | |
| ACTTGAATTGAAAAGTCTGT+TGG | + | chr4.4:10722012-10722031 | None:intergenic | 30.0% | |
| ATACATTTACCAATGATCTC+TGG | + | chr4.4:10723187-10723206 | None:intergenic | 30.0% | |
| ATTCCTAGATATCAAAATGG+AGG | - | chr4.4:10723529-10723548 | MS.gene28073:intron | 30.0% | |
| ATTGAAGATCTGAACCAATT+TGG | - | chr4.4:10724416-10724435 | MS.gene28073:CDS | 30.0% | |
| CCTACTAATATTGAATTTCC+CGG | + | chr4.4:10723853-10723872 | None:intergenic | 30.0% | |
| CTTGAATTGAAAAGTCTGTT+GGG | + | chr4.4:10722011-10722030 | None:intergenic | 30.0% | |
| GTACAAATGATCCTTACAAA+TGG | - | chr4.4:10724600-10724619 | MS.gene28073:intron | 30.0% | |
| TGTATAGAGGAAATACTTTG+CGG | + | chr4.4:10724727-10724746 | None:intergenic | 30.0% | |
| TTGAAGATCTGAACCAATTT+GGG | - | chr4.4:10724417-10724436 | MS.gene28073:CDS | 30.0% | |
| TTGTGAAAATCTATCTCCAT+GGG | - | chr4.4:10722979-10722998 | MS.gene28073:CDS | 30.0% | |
| ! | AAACTTCTTTAGAAGGAAAG+AGG | - | chr4.4:10724557-10724576 | MS.gene28073:intron | 30.0% |
| ! | AACTTCTTTAGAAGGAAAGA+GGG | - | chr4.4:10724558-10724577 | MS.gene28073:intron | 30.0% |
| ! | ACACAAACTTTTGTGTATAG+AGG | + | chr4.4:10724740-10724759 | None:intergenic | 30.0% |
| ! | ACTCTATGACACATGATTTT+GGG | + | chr4.4:10724678-10724697 | None:intergenic | 30.0% |
| ! | TTTTACTGAGCTAAACAAGA+AGG | + | chr4.4:10722109-10722128 | None:intergenic | 30.0% |
| !! | TCATTTTTCTCCTGTCATAT+TGG | - | chr4.4:10723586-10723605 | MS.gene28073:intron | 30.0% |
| !! | TGTGTTGTTGTGTTTTTCAA+AGG | + | chr4.4:10724396-10724415 | None:intergenic | 30.0% |
| !! | TTATTTTGCAGAGTCTTCTA+CGG | + | chr4.4:10724147-10724166 | None:intergenic | 30.0% |
| AAAAACACTCAAAGCAGAAC+TGG | - | chr4.4:10725223-10725242 | MS.gene28073:intron | 35.0% | |
| AAACTTGAAAACTTTCCAGG+TGG | - | chr4.4:10722749-10722768 | MS.gene28073:intron | 35.0% | |
| AAATGGAGGTCAAGGAAAAA+TGG | - | chr4.4:10723543-10723562 | MS.gene28073:intron | 35.0% | |
| AACCAAACAGCAAGACTAAT+TGG | - | chr4.4:10724632-10724651 | MS.gene28073:intron | 35.0% | |
| AACCACTTATAATGTGCACA+AGG | - | chr4.4:10722038-10722057 | MS.gene28073:CDS | 35.0% | |
| AATGCCAATTCCAATATGAC+AGG | + | chr4.4:10723599-10723618 | None:intergenic | 35.0% | |
| AATTTCAGCAATTAGGGCAA+AGG | - | chr4.4:10723153-10723172 | MS.gene28073:intron | 35.0% | |
| ACAAAACAACATTGTGGATC+TGG | - | chr4.4:10724937-10724956 | MS.gene28073:intron | 35.0% | |
| AGAGCACAATCCTGTTAATA+GGG | - | chr4.4:10722237-10722256 | MS.gene28073:intron | 35.0% | |
| AGATATCAAAATGGAGGTCA+AGG | - | chr4.4:10723535-10723554 | MS.gene28073:intron | 35.0% | |
| AGCCTCTAATCTCAAATTCT+GGG | - | chr4.4:10722717-10722736 | MS.gene28073:intron | 35.0% | |
| AGCTATTGTGACATGTTTGT+TGG | + | chr4.4:10721787-10721806 | None:intergenic | 35.0% | |
| ATATCAAAATGCGGCTACAT+AGG | - | chr4.4:10722680-10722699 | MS.gene28073:intron | 35.0% | |
| ATCATGTGTCATAGAGTGAA+AGG | - | chr4.4:10724681-10724700 | MS.gene28073:intron | 35.0% | |
| ATCTGCAACAAGAACTTACA+TGG | + | chr4.4:10723406-10723425 | None:intergenic | 35.0% | |
| ATGACTGAAGAACTAGAAGA+TGG | - | chr4.4:10722875-10722894 | MS.gene28073:intron | 35.0% | |
| ATTTCAGCAATTAGGGCAAA+GGG | - | chr4.4:10723154-10723173 | MS.gene28073:intron | 35.0% | |
| CACAGCATCTTCTAACAATT+TGG | + | chr4.4:10723015-10723034 | None:intergenic | 35.0% | |
| CAGAGCTAATATGTCCATAA+TGG | - | chr4.4:10725041-10725060 | MS.gene28073:intron | 35.0% | |
| CATAAAATGATCAATGCGGA+GGG | + | chr4.4:10723128-10723147 | None:intergenic | 35.0% | |
| CCGGGAAATTCAATATTAGT+AGG | - | chr4.4:10723850-10723869 | MS.gene28073:CDS | 35.0% | |
| CTCAAACTTGAAAACTTTCC+AGG | - | chr4.4:10722746-10722765 | MS.gene28073:intron | 35.0% | |
| CTTGTGAAAATCTATCTCCA+TGG | - | chr4.4:10722978-10722997 | MS.gene28073:CDS | 35.0% | |
| GAATGTATGAGGAGTTAGAA+GGG | - | chr4.4:10723236-10723255 | MS.gene28073:CDS | 35.0% | |
| GAATTAAAAGGCTGACCTTT+AGG | + | chr4.4:10724010-10724029 | None:intergenic | 35.0% | |
| GACAAACCAAAGAATCTATC+AGG | - | chr4.4:10725326-10725345 | MS.gene28073:intron | 35.0% | |
| GAGGAGGAATTATGCTTATT+AGG | + | chr4.4:10723369-10723388 | None:intergenic | 35.0% | |
| GATTTATGCTCCCTATTAAC+AGG | + | chr4.4:10722250-10722269 | None:intergenic | 35.0% | |
| GCGGATAATTTCAGCAATTA+GGG | - | chr4.4:10723147-10723166 | MS.gene28073:intron | 35.0% | |
| GCTATTGTGACATGTTTGTT+GGG | + | chr4.4:10721786-10721805 | None:intergenic | 35.0% | |
| TACCCCTTGATATCAAAATG+CGG | - | chr4.4:10722671-10722690 | MS.gene28073:intron | 35.0% | |
| TACCTTGTGCACATTATAAG+TGG | + | chr4.4:10722043-10722062 | None:intergenic | 35.0% | |
| TATCAGGCTGGAGTTTAAAT+TGG | - | chr4.4:10725342-10725361 | MS.gene28073:intron | 35.0% | |
| TCATGTGTCATAGAGTGAAA+GGG | - | chr4.4:10724682-10724701 | MS.gene28073:intron | 35.0% | |
| TCCGCATAAAATGATCAATG+CGG | + | chr4.4:10723132-10723151 | None:intergenic | 35.0% | |
| TCTAAGCTGAATCACCATTA+TGG | + | chr4.4:10725058-10725077 | None:intergenic | 35.0% | |
| TCTGCAACAAGAACTTACAT+GGG | + | chr4.4:10723405-10723424 | None:intergenic | 35.0% | |
| TGAAATGATCGAGTATGTTC+TGG | + | chr4.4:10723957-10723976 | None:intergenic | 35.0% | |
| TGAAGATCTGAACCAATTTG+GGG | - | chr4.4:10724418-10724437 | MS.gene28073:CDS | 35.0% | |
| TGCGGATAATTTCAGCAATT+AGG | - | chr4.4:10723146-10723165 | MS.gene28073:intron | 35.0% | |
| TGTCTATAGTTTCAGATGTC+TGG | + | chr4.4:10725202-10725221 | None:intergenic | 35.0% | |
| TTCTCCTGTCATATTGGAAT+TGG | - | chr4.4:10723592-10723611 | MS.gene28073:intron | 35.0% | |
| TTTACCAATGATCTCTGGTT+TGG | + | chr4.4:10723182-10723201 | None:intergenic | 35.0% | |
| ! | AAGAGCACAATCCTGTTAAT+AGG | - | chr4.4:10722236-10722255 | MS.gene28073:intron | 35.0% |
| ! | AGACTTTTCAATTCAAGTCC+AGG | - | chr4.4:10722014-10722033 | MS.gene28073:CDS | 35.0% |
| ! | ATTTGGATATTTTCAGCCCA+TGG | + | chr4.4:10722998-10723017 | None:intergenic | 35.0% |
| ! | CACTCTATGACACATGATTT+TGG | + | chr4.4:10724679-10724698 | None:intergenic | 35.0% |
| ! | CTCTATGACACATGATTTTG+GGG | + | chr4.4:10724677-10724696 | None:intergenic | 35.0% |
| ! | CTCTTTTGGATAGAGAAAGA+GGG | - | chr4.4:10722345-10722364 | MS.gene28073:intron | 35.0% |
| ! | TATCCGAGTTGAAGTCTATA+GGG | + | chr4.4:10722817-10722836 | None:intergenic | 35.0% |
| ! | TCTTTTGGATAGAGAAAGAG+GGG | - | chr4.4:10722346-10722365 | MS.gene28073:intron | 35.0% |
| ! | TTATCCGAGTTGAAGTCTAT+AGG | + | chr4.4:10722818-10722837 | None:intergenic | 35.0% |
| ! | TTCCCAGAATTTGAGATTAG+AGG | + | chr4.4:10722722-10722741 | None:intergenic | 35.0% |
| !! | GATCTTTGGAACTTAGTCTT+CGG | - | chr4.4:10724260-10724279 | MS.gene28073:CDS | 35.0% |
| !! | TAGCCGCATTTTGATATCAA+GGG | + | chr4.4:10722677-10722696 | None:intergenic | 35.0% |
| !! | TCCGCATTGATCATTTTATG+CGG | - | chr4.4:10723128-10723147 | MS.gene28073:intron | 35.0% |
| !! | TGACCTCCATTTTGATATCT+AGG | + | chr4.4:10723535-10723554 | None:intergenic | 35.0% |
| !! | TGGACATATTAGCTCTGAAA+AGG | + | chr4.4:10725038-10725057 | None:intergenic | 35.0% |
| !! | TGTTTTGCATGCTTTTAAGG+AGG | + | chr4.4:10722425-10722444 | None:intergenic | 35.0% |
| !! | TTCCAATTAGTCTTGCTGTT+TGG | + | chr4.4:10724637-10724656 | None:intergenic | 35.0% |
| !!! | AGATCCACAATGTTGTTTTG+TGG | + | chr4.4:10724938-10724957 | None:intergenic | 35.0% |
| !!! | TGCTGTTTTGCATGCTTTTA+AGG | + | chr4.4:10722428-10722447 | None:intergenic | 35.0% |
| AAAAGTCTGTTGGGATTCGA+GGG | + | chr4.4:10722002-10722021 | None:intergenic | 40.0% | |
| AACCAAAGAATCTATCAGGC+TGG | - | chr4.4:10725330-10725349 | MS.gene28073:intron | 40.0% | |
| AAGTGGAATCAACTCTCAAC+AGG | - | chr4.4:10725169-10725188 | MS.gene28073:CDS | 40.0% | |
| ACAGGAGGTGAAACTAGATA+TGG | - | chr4.4:10725398-10725417 | MS.gene28073:CDS | 40.0% | |
| AGAACCTGCGTTGTATACTT+TGG | + | chr4.4:10725095-10725114 | None:intergenic | 40.0% | |
| AGACTAAGTTCCAAAGATCC+AGG | + | chr4.4:10724259-10724278 | None:intergenic | 40.0% | |
| AGAGAACATCAGACATGGAT+AGG | - | chr4.4:10722395-10722414 | MS.gene28073:intron | 40.0% | |
| ATCATCAGCAGGGTATATGA+GGG | - | chr4.4:10722143-10722162 | MS.gene28073:intron | 40.0% | |
| ATGCAACTGCAACAAAAGTC+CGG | - | chr4.4:10723831-10723850 | MS.gene28073:CDS | 40.0% | |
| CACAAACACACTAGGAAGAA+AGG | + | chr4.4:10722280-10722299 | None:intergenic | 40.0% | |
| CAGCATCTAATCAAGAAAGC+TGG | - | chr4.4:10723083-10723102 | MS.gene28073:intron | 40.0% | |
| CAGCCTCTAATCTCAAATTC+TGG | - | chr4.4:10722716-10722735 | MS.gene28073:intron | 40.0% | |
| CATACTCGATCATTTCACGA+TGG | - | chr4.4:10723960-10723979 | MS.gene28073:CDS | 40.0% | |
| CATCTAATCAAGAAAGCTGG+TGG | - | chr4.4:10723086-10723105 | MS.gene28073:intron | 40.0% | |
| CATTTGTCGTGCTTTCTTCA+TGG | - | chr4.4:10722930-10722949 | MS.gene28073:intron | 40.0% | |
| CCTCTTTCTCTATCCAAAAG+AGG | + | chr4.4:10722347-10722366 | None:intergenic | 40.0% | |
| CTGTGATTCTATAGCTTGGA+AGG | - | chr4.4:10723030-10723049 | MS.gene28073:CDS | 40.0% | |
| CTTGTTGCAGATGCTAAAGA+TGG | - | chr4.4:10723414-10723433 | MS.gene28073:CDS | 40.0% | |
| CTTTCTCTATCCAAAAGAGG+TGG | + | chr4.4:10722344-10722363 | None:intergenic | 40.0% | |
| GAAAACATCTGACCCCAAAT+TGG | + | chr4.4:10724433-10724452 | None:intergenic | 40.0% | |
| GACTAAGTTCCAAAGATCCA+GGG | + | chr4.4:10724258-10724277 | None:intergenic | 40.0% | |
| GAGAACATCAGACATGGATA+GGG | - | chr4.4:10722396-10722415 | MS.gene28073:intron | 40.0% | |
| GATGCTGTGATTCTATAGCT+TGG | - | chr4.4:10723026-10723045 | MS.gene28073:CDS | 40.0% | |
| GCACATTATAAGTGGTTTCC+TGG | + | chr4.4:10722035-10722054 | None:intergenic | 40.0% | |
| GCATAAAATGATCAATGCGG+AGG | + | chr4.4:10723129-10723148 | None:intergenic | 40.0% | |
| GGAATGTATGAGGAGTTAGA+AGG | - | chr4.4:10723235-10723254 | MS.gene28073:CDS | 40.0% | |
| GGAATTGGCATTAATGCTGA+AGG | - | chr4.4:10723607-10723626 | MS.gene28073:intron | 40.0% | |
| GGAGAATGTAAAGTCCAACA+TGG | - | chr4.4:10725244-10725263 | MS.gene28073:intron | 40.0% | |
| GGTATTTAAGCAGATGCTAG+TGG | + | chr4.4:10724375-10724394 | None:intergenic | 40.0% | |
| TAAAAGGCTGACCTTTAGGT+AGG | + | chr4.4:10724006-10724025 | None:intergenic | 40.0% | |
| TAGAAGGGCTTAGAGGATAT+GGG | - | chr4.4:10723251-10723270 | MS.gene28073:CDS | 40.0% | |
| TAGACAGAGAACATCAGACA+TGG | - | chr4.4:10722390-10722409 | MS.gene28073:intron | 40.0% | |
| TATCATCAGCAGGGTATATG+AGG | - | chr4.4:10722142-10722161 | MS.gene28073:intron | 40.0% | |
| TCAAATGTTTCACATCCACC+TGG | + | chr4.4:10722767-10722786 | None:intergenic | 40.0% | |
| TCAGACCTTGAAAAGAGAGT+TGG | - | chr4.4:10723469-10723488 | MS.gene28073:intron | 40.0% | |
| TCATGCAATATGCCAAGAGA+TGG | - | chr4.4:10723206-10723225 | MS.gene28073:CDS | 40.0% | |
| TCCAAACAGTATCATCAGCA+GGG | - | chr4.4:10722133-10722152 | MS.gene28073:intron | 40.0% | |
| TCCTTCCATGTAAAACCAAC+AGG | - | chr4.4:10725380-10725399 | MS.gene28073:CDS | 40.0% | |
| TCTAACTCCTCATACATTCC+TGG | + | chr4.4:10723235-10723254 | None:intergenic | 40.0% | |
| TGAACCAAAGTATACAACGC+AGG | - | chr4.4:10725088-10725107 | MS.gene28073:intron | 40.0% | |
| TTAGAAGGGCTTAGAGGATA+TGG | - | chr4.4:10723250-10723269 | MS.gene28073:CDS | 40.0% | |
| TTCCAAACAGTATCATCAGC+AGG | - | chr4.4:10722132-10722151 | MS.gene28073:intron | 40.0% | |
| TTCCATGTAAAACCAACAGG+AGG | - | chr4.4:10725383-10725402 | MS.gene28073:CDS | 40.0% | |
| ! | AAGAAAGCACGACAAATGTG+AGG | + | chr4.4:10722928-10722947 | None:intergenic | 40.0% |
| ! | AGTTTTCCATCTGCATGGAA+GGG | + | chr4.4:10724509-10724528 | None:intergenic | 40.0% |
| ! | CCATACCAACTCTCTTTTCA+AGG | + | chr4.4:10723477-10723496 | None:intergenic | 40.0% |
| ! | CCTCTTTTGGATAGAGAAAG+AGG | - | chr4.4:10722344-10722363 | MS.gene28073:intron | 40.0% |
| ! | CTTTTGGATAGAGAAAGAGG+GGG | - | chr4.4:10722347-10722366 | MS.gene28073:intron | 40.0% |
| ! | GTCTTGCATAGTGCAGTTTT+CGG | + | chr4.4:10723757-10723776 | None:intergenic | 40.0% |
| ! | GTGGATCTGGTTCACATTAT+AGG | - | chr4.4:10724950-10724969 | MS.gene28073:intron | 40.0% |
| ! | TAGTTTTCCATCTGCATGGA+AGG | + | chr4.4:10724510-10724529 | None:intergenic | 40.0% |
| ! | TATCTAGTTTCACCTCCTGT+TGG | + | chr4.4:10725398-10725417 | None:intergenic | 40.0% |
| ! | TATGGTGTTAGAAGATGCTG+AGG | - | chr4.4:10723492-10723511 | MS.gene28073:intron | 40.0% |
| ! | TCTGGTTCACATTATAGGCA+TGG | - | chr4.4:10724955-10724974 | MS.gene28073:intron | 40.0% |
| ! | TCTTGCATAGTGCAGTTTTC+GGG | + | chr4.4:10723756-10723775 | None:intergenic | 40.0% |
| ! | TGCGTTGTATACTTTGGTTC+AGG | + | chr4.4:10725089-10725108 | None:intergenic | 40.0% |
| ! | TTCTGTCAGACTGACTTTCA+GGG | + | chr4.4:10721731-10721750 | None:intergenic | 40.0% |
| !! | AGCCGCATTTTGATATCAAG+GGG | + | chr4.4:10722676-10722695 | None:intergenic | 40.0% |
| !! | ATGACACATGATTTTGGGGA+GGG | + | chr4.4:10724673-10724692 | None:intergenic | 40.0% |
| !! | CCTTGAAAAGAGAGTTGGTA+TGG | - | chr4.4:10723474-10723493 | MS.gene28073:intron | 40.0% |
| !! | GTAGCCGCATTTTGATATCA+AGG | + | chr4.4:10722678-10722697 | None:intergenic | 40.0% |
| !! | TATGACACATGATTTTGGGG+AGG | + | chr4.4:10724674-10724693 | None:intergenic | 40.0% |
| !! | TGGTCATTTTCATAAGCCTC+CGG | + | chr4.4:10723665-10723684 | None:intergenic | 40.0% |
| !!! | TCACTAGTTTTCCATCTGCA+TGG | + | chr4.4:10724514-10724533 | None:intergenic | 40.0% |
| !!! | TCCTGTTGGTTTTACATGGA+AGG | + | chr4.4:10725384-10725403 | None:intergenic | 40.0% |
| !!! | TTTTTGGTTTGGGCTTATGC+AGG | - | chr4.4:10721968-10721987 | MS.gene28073:CDS | 40.0% |
| AAAATGATCAATGCGGAGGG+TGG | + | chr4.4:10723125-10723144 | None:intergenic | 45.0% | |
| AAAGTCTGTTGGGATTCGAG+GGG | + | chr4.4:10722001-10722020 | None:intergenic | 45.0% | |
| AAGATCCAGGGAACTTTACC+TGG | + | chr4.4:10724246-10724265 | None:intergenic | 45.0% | |
| AAGCTGGTGGTTCGATGATT+TGG | - | chr4.4:10723099-10723118 | MS.gene28073:intron | 45.0% | |
| ACCCTGCTGATGATACTGTT+TGG | + | chr4.4:10722137-10722156 | None:intergenic | 45.0% | |
| ACCTGGACAACTGTTCTTAG+AGG | + | chr4.4:10724229-10724248 | None:intergenic | 45.0% | |
| AGAAATCCCTTCCATGCAGA+TGG | - | chr4.4:10724500-10724519 | MS.gene28073:intron | 45.0% | |
| AGCAATGCAAGAGAAGGAAC+CGG | - | chr4.4:10725142-10725161 | MS.gene28073:CDS | 45.0% | |
| AGCCATTGACACCTACCTAA+AGG | - | chr4.4:10723992-10724011 | MS.gene28073:CDS | 45.0% | |
| ATGGCTACCAGGAATGTATG+AGG | - | chr4.4:10723225-10723244 | MS.gene28073:CDS | 45.0% | |
| CAAAATGCGGCTACATAGGA+CGG | - | chr4.4:10722684-10722703 | MS.gene28073:intron | 45.0% | |
| CACACACACACAAACACACT+AGG | + | chr4.4:10722288-10722307 | None:intergenic | 45.0% | |
| CAGGCTGGAGTTTAAATTGG+CGG | - | chr4.4:10725345-10725364 | MS.gene28073:intron | 45.0% | |
| CCTCCCTATAGACTTCAACT+CGG | - | chr4.4:10722811-10722830 | MS.gene28073:intron | 45.0% | |
| CTCCAGCCTGATAGATTCTT+TGG | + | chr4.4:10725335-10725354 | None:intergenic | 45.0% | |
| CTCTATCCAAAAGAGGTGGT+GGG | + | chr4.4:10722340-10722359 | None:intergenic | 45.0% | |
| GAAAAGTCTGTTGGGATTCG+AGG | + | chr4.4:10722003-10722022 | None:intergenic | 45.0% | |
| GACCTTTAGGTAGGTGTCAA+TGG | + | chr4.4:10723997-10724016 | None:intergenic | 45.0% | |
| GATCTGTTGCAACTTCAGCT+AGG | + | chr4.4:10723890-10723909 | None:intergenic | 45.0% | |
| GCAGTAATTCAGCCAAGACT+TGG | + | chr4.4:10723935-10723954 | None:intergenic | 45.0% | |
| GGAACCAAACCAGAGATCAT+TGG | - | chr4.4:10723175-10723194 | MS.gene28073:intron | 45.0% | |
| GGGAAAATTTCCCTCAAGAG+AGG | - | chr4.4:10722367-10722386 | MS.gene28073:intron | 45.0% | |
| GGTAAAGTTCCCTGGATCTT+TGG | - | chr4.4:10724246-10724265 | MS.gene28073:CDS | 45.0% | |
| GTTCTGCAGTTCTACCATGT+TGG | + | chr4.4:10725261-10725280 | None:intergenic | 45.0% | |
| TAAAAATGAGCCCGCAAGTG+AGG | - | chr4.4:10723057-10723076 | MS.gene28073:intron | 45.0% | |
| TCTACGGTCTTGGTCAGTTA+GGG | + | chr4.4:10724131-10724150 | None:intergenic | 45.0% | |
| TCTATCCAAAAGAGGTGGTG+GGG | + | chr4.4:10722339-10722358 | None:intergenic | 45.0% | |
| TCTCTATCCAAAAGAGGTGG+TGG | + | chr4.4:10722341-10722360 | None:intergenic | 45.0% | |
| TCTCTGTCTACCTCTCTTGA+GGG | + | chr4.4:10722380-10722399 | None:intergenic | 45.0% | |
| TGCAACTGCAACAAAAGTCC+GGG | - | chr4.4:10723832-10723851 | MS.gene28073:CDS | 45.0% | |
| TGTGAGGAAAGCTTCAGTCT+TGG | + | chr4.4:10722912-10722931 | None:intergenic | 45.0% | |
| TTCTACGGTCTTGGTCAGTT+AGG | + | chr4.4:10724132-10724151 | None:intergenic | 45.0% | |
| TTCTCTGTCTACCTCTCTTG+AGG | + | chr4.4:10722381-10722400 | None:intergenic | 45.0% | |
| TTGGTCAGTTAGGGAAGGAT+GGG | + | chr4.4:10724122-10724141 | None:intergenic | 45.0% | |
| ! | ACTTTCAGGGTCTTGTGCTT+GGG | + | chr4.4:10721718-10721737 | None:intergenic | 45.0% |
| ! | GAGTTGATTCCACTTTGTGC+CGG | + | chr4.4:10725164-10725183 | None:intergenic | 45.0% |
| ! | GCATGGCATCTAAGATAGTG+TGG | - | chr4.4:10724972-10724991 | MS.gene28073:intron | 45.0% |
| ! | GTTCTGTCAGACTGACTTTC+AGG | + | chr4.4:10721732-10721751 | None:intergenic | 45.0% |
| !! | AGAGAGCACTAGACATAGCA+AGG | - | chr4.4:10723321-10723340 | MS.gene28073:CDS | 45.0% |
| !!! | CACCTCCTGTTGGTTTTACA+TGG | + | chr4.4:10725388-10725407 | None:intergenic | 45.0% |
| !!! | GTGCAGTTTTCGGGTGAATT+AGG | + | chr4.4:10723747-10723766 | None:intergenic | 45.0% |
| AGATGCTGCATCCTCACTTG+CGG | + | chr4.4:10723071-10723090 | None:intergenic | 50.0% | |
| CATGGGACAGCATCTTGTTG+AGG | + | chr4.4:10723388-10723407 | None:intergenic | 50.0% | |
| CATTCCTGGTAGCCATCTCT+TGG | + | chr4.4:10723221-10723240 | None:intergenic | 50.0% | |
| CTTGGTCAGTTAGGGAAGGA+TGG | + | chr4.4:10724123-10724142 | None:intergenic | 50.0% | |
| GAGAGCAGCAATGCAAGAGA+AGG | - | chr4.4:10725136-10725155 | MS.gene28073:CDS | 50.0% | |
| GAGGAGTTAGAAGGGCTTAG+AGG | - | chr4.4:10723244-10723263 | MS.gene28073:CDS | 50.0% | |
| GATCTACGACGAGTGTGGTT+TGG | + | chr4.4:10725443-10725462 | None:intergenic | 50.0% | |
| GTTGTCCAGGTAAAGTTCCC+TGG | - | chr4.4:10724238-10724257 | MS.gene28073:CDS | 50.0% | |
| TATGCCAAGAGATGGCTACC+AGG | - | chr4.4:10723214-10723233 | MS.gene28073:CDS | 50.0% | |
| TGCAGAGTCTTCTACGGTCT+TGG | + | chr4.4:10724141-10724160 | None:intergenic | 50.0% | |
| ! | CCGAGTTGAAGTCTATAGGG+AGG | + | chr4.4:10722814-10722833 | None:intergenic | 50.0% |
| ! | GACTTTCAGGGTCTTGTGCT+TGG | + | chr4.4:10721719-10721738 | None:intergenic | 50.0% |
| ! | GCCTCTAAGAACAGTTGTCC+AGG | - | chr4.4:10724225-10724244 | MS.gene28073:CDS | 50.0% |
| !! | ACGAGTGTGGTTTGGTGATG+TGG | + | chr4.4:10725435-10725454 | None:intergenic | 50.0% |
| !! | CGAGTGTGGTTTGGTGATGT+GGG | + | chr4.4:10725434-10725453 | None:intergenic | 50.0% |
| ACACGGAGAGCCTTCTTCTC+GGG | + | chr4.4:10725469-10725488 | None:intergenic | 55.0% | |
| ATGCGGCTACATAGGACGGT+CGG | - | chr4.4:10722688-10722707 | MS.gene28073:intron | 55.0% | |
| CGGTCTTGGTCAGTTAGGGA+AGG | + | chr4.4:10724127-10724146 | None:intergenic | 55.0% | |
| GACACGGAGAGCCTTCTTCT+CGG | + | chr4.4:10725470-10725489 | None:intergenic | 55.0% | |
| GAGAAGGAACCGGCACAAAG+TGG | - | chr4.4:10725152-10725171 | MS.gene28073:CDS | 55.0% | |
| GATGCTGCATCCTCACTTGC+GGG | + | chr4.4:10723070-10723089 | None:intergenic | 55.0% | |
| GGGACAGCATCTTGTTGAGG+AGG | + | chr4.4:10723385-10723404 | None:intergenic | 55.0% | |
| GGGCTTAGAGGATATGGGCA+TGG | - | chr4.4:10723256-10723275 | MS.gene28073:CDS | 55.0% | |
| GTAGATCAGCCCCGAGAAGA+AGG | - | chr4.4:10725456-10725475 | MS.gene28073:CDS | 55.0% | |
| !! | ATCCAAAAGAGGTGGTGGGG+TGG | + | chr4.4:10722336-10722355 | None:intergenic | 55.0% |
| !! | TCCAAAAGAGGTGGTGGGGT+GGG | + | chr4.4:10722335-10722354 | None:intergenic | 55.0% |
| CACGGAGAGCCTTCTTCTCG+GGG | + | chr4.4:10725468-10725487 | None:intergenic | 60.0% | |
| GGGCTGATCTACGACGAGTG+TGG | + | chr4.4:10725448-10725467 | None:intergenic | 60.0% | |
| ! | TCCCACCCCACCACCTCTTT+TGG | - | chr4.4:10722331-10722350 | MS.gene28073:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10721696 | 10725493 | 10721696 | ID=MS.gene28073 |
| chr4.4 | mRNA | 10721696 | 10725493 | 10721696 | ID=MS.gene28073.t1;Parent=MS.gene28073 |
| chr4.4 | exon | 10725357 | 10725493 | 10725357 | ID=MS.gene28073.t1.exon1;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10725357 | 10725493 | 10725357 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| chr4.4 | exon | 10725130 | 10725199 | 10725130 | ID=MS.gene28073.t1.exon2;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10725130 | 10725199 | 10725130 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| chr4.4 | exon | 10723620 | 10724518 | 10723620 | ID=MS.gene28073.t1.exon3;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10723620 | 10724518 | 10723620 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| chr4.4 | exon | 10723176 | 10723449 | 10723176 | ID=MS.gene28073.t1.exon4;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10723176 | 10723449 | 10723176 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| chr4.4 | exon | 10722943 | 10723071 | 10722943 | ID=MS.gene28073.t1.exon5;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10722943 | 10723071 | 10722943 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| chr4.4 | exon | 10721696 | 10722079 | 10721696 | ID=MS.gene28073.t1.exon6;Parent=MS.gene28073.t1 |
| chr4.4 | CDS | 10721696 | 10722079 | 10721696 | ID=cds.MS.gene28073.t1;Parent=MS.gene28073.t1 |
| Gene Sequence |
| Protein sequence |
