Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067713.t1 | XP_003606129.1 | 98.3 | 345 | 6 | 0 | 1 | 345 | 1 | 345 | 2.70E-201 | 711.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067713.t1 | Q9SGE0 | 75.5 | 347 | 82 | 2 | 2 | 345 | 6 | 352 | 2.4e-161 | 569.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067713.t1 | G7JIF7 | 98.3 | 345 | 6 | 0 | 1 | 345 | 1 | 345 | 2.0e-201 | 711.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene067713 | 0.869875 | 2.23E-66 | -1.69E-46 |
| MS.gene049217 | MS.gene067713 | 0.807302 | 5.40E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene067713 | 0.877765 | 4.83E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene067713 | 0.913075 | 9.36E-84 | -1.69E-46 |
| MS.gene049285 | MS.gene067713 | 0.859321 | 4.48E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene067713 | 0.860407 | 2.11E-63 | -1.69E-46 |
| MS.gene049396 | MS.gene067713 | 0.859635 | 3.61E-63 | -1.69E-46 |
| MS.gene049552 | MS.gene067713 | 0.810746 | 9.89E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene067713 | 0.870919 | 1.01E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene067713 | 0.876002 | 1.97E-68 | -1.69E-46 |
| MS.gene049656 | MS.gene067713 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene067713 | 0.827807 | 1.28E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene067713 | 0.842541 | 2.43E-58 | -1.69E-46 |
| MS.gene049865 | MS.gene067713 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene067713 | 0.876804 | 1.04E-68 | -1.69E-46 |
| MS.gene050163 | MS.gene067713 | 0.808489 | 3.02E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene067713 | 0.800214 | 1.60E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene067713 | 0.913264 | 7.52E-84 | -1.69E-46 |
| MS.gene050216 | MS.gene067713 | 0.835436 | 1.68E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene067713 | 0.897572 | 1.24E-76 | -1.69E-46 |
| MS.gene050333 | MS.gene067713 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene067713 | -0.806825 | 6.81E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene067713 | 0.889969 | 1.50E-73 | -1.69E-46 |
| MS.gene050502 | MS.gene067713 | 0.874085 | 8.89E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene067713 | 0.887455 | 1.41E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene067713 | 0.845314 | 4.39E-59 | -1.69E-46 |
| MS.gene050577 | MS.gene067713 | 0.888786 | 4.33E-73 | -1.69E-46 |
| MS.gene050593 | MS.gene067713 | 0.838594 | 2.62E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene067713 | 0.859633 | 3.61E-63 | -1.69E-46 |
| MS.gene050662 | MS.gene067713 | 0.824602 | 7.38E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene067713 | 0.867421 | 1.39E-65 | -1.69E-46 |
| MS.gene050697 | MS.gene067713 | 0.838569 | 2.66E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene067713 | 0.852849 | 3.52E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene067713 | 0.877158 | 7.86E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene067713 | 0.873796 | 1.11E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene067713 | 0.872004 | 4.44E-67 | -1.69E-46 |
| MS.gene05081 | MS.gene067713 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene067713 | 0.89923 | 2.43E-77 | -1.69E-46 |
| MS.gene050871 | MS.gene067713 | 0.900753 | 5.34E-78 | -1.69E-46 |
| MS.gene050904 | MS.gene067713 | 0.845002 | 5.33E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene067713 | 0.869942 | 2.12E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene067713 | 0.878511 | 2.65E-69 | -1.69E-46 |
| MS.gene051268 | MS.gene067713 | 0.837701 | 4.45E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene067713 | 0.837963 | 3.81E-57 | -1.69E-46 |
| MS.gene051509 | MS.gene067713 | 0.850289 | 1.87E-60 | -1.69E-46 |
| MS.gene051551 | MS.gene067713 | 0.859385 | 4.29E-63 | -1.69E-46 |
| MS.gene051560 | MS.gene067713 | 0.833174 | 6.20E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene067713 | -0.808513 | 2.99E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene067713 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene067713 | 0.870101 | 1.88E-66 | -1.69E-46 |
| MS.gene051874 | MS.gene067713 | 0.833037 | 6.71E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene067713 | 0.845962 | 2.93E-59 | -1.69E-46 |
| MS.gene052066 | MS.gene067713 | 0.840837 | 6.83E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene067713 | 0.898101 | 7.38E-77 | -1.69E-46 |
| MS.gene052346 | MS.gene067713 | 0.818931 | 1.52E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene067713 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene067713 | 0.865291 | 6.57E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene067713 | 0.867035 | 1.84E-65 | -1.69E-46 |
| MS.gene052494 | MS.gene067713 | -0.817565 | 3.09E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene067713 | 0.843923 | 1.04E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene067713 | 0.90464 | 9.93E-80 | -1.69E-46 |
| MS.gene052504 | MS.gene067713 | 0.817773 | 2.77E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene067713 | 0.828913 | 6.90E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene067713 | 0.858169 | 9.90E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene067713 | 0.851237 | 1.01E-60 | -1.69E-46 |
| MS.gene052822 | MS.gene067713 | 0.855533 | 5.92E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene067713 | 0.902877 | 6.18E-79 | -1.69E-46 |
| MS.gene052825 | MS.gene067713 | 0.897224 | 1.73E-76 | -1.69E-46 |
| MS.gene052966 | MS.gene067713 | 0.874746 | 5.31E-68 | -1.69E-46 |
| MS.gene053117 | MS.gene067713 | 0.804939 | 1.70E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene067713 | 0.895591 | 8.29E-76 | -1.69E-46 |
| MS.gene053207 | MS.gene067713 | 0.826792 | 2.23E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene067713 | 0.860041 | 2.72E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene067713 | 0.86553 | 5.52E-65 | -1.69E-46 |
| MS.gene053420 | MS.gene067713 | -0.802076 | 6.66E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene067713 | 0.88882 | 4.20E-73 | -1.69E-46 |
| MS.gene053479 | MS.gene067713 | 0.849839 | 2.50E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene067713 | 0.86197 | 7.06E-64 | -1.69E-46 |
| MS.gene053574 | MS.gene067713 | 0.907686 | 3.87E-81 | -1.69E-46 |
| MS.gene053626 | MS.gene067713 | 0.897132 | 1.89E-76 | -1.69E-46 |
| MS.gene053632 | MS.gene067713 | 0.837388 | 5.35E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene067713 | 0.852109 | 5.73E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene067713 | 0.868152 | 8.07E-66 | -1.69E-46 |
| MS.gene053912 | MS.gene067713 | 0.82631 | 2.91E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene067713 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene067713 | 0.854309 | 1.34E-61 | -1.69E-46 |
| MS.gene054408 | MS.gene067713 | 0.840138 | 1.04E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene067713 | 0.898975 | 3.13E-77 | -1.69E-46 |
| MS.gene054600 | MS.gene067713 | 0.841346 | 5.02E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene067713 | 0.837552 | 4.86E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene067713 | -0.839783 | 1.29E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene067713 | 0.881764 | 1.83E-70 | -1.69E-46 |
| MS.gene054927 | MS.gene067713 | 0.842513 | 2.47E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene067713 | 0.806099 | 9.69E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene067713 | 0.882876 | 7.21E-71 | -1.69E-46 |
| MS.gene05505 | MS.gene067713 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene067713 | 0.832046 | 1.18E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene067713 | 0.865359 | 6.25E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene067713 | 0.881501 | 2.28E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene067713 | 0.866552 | 2.62E-65 | -1.69E-46 |
| MS.gene055629 | MS.gene067713 | 0.852047 | 5.96E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene067713 | 0.844739 | 6.27E-59 | -1.69E-46 |
| MS.gene055741 | MS.gene067713 | 0.818413 | 1.99E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene067713 | 0.807982 | 3.87E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene067713 | 0.846487 | 2.11E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene067713 | 0.864739 | 9.79E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene067713 | 0.848251 | 6.91E-60 | -1.69E-46 |
| MS.gene055776 | MS.gene067713 | 0.835024 | 2.13E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene067713 | 0.911973 | 3.31E-83 | -1.69E-46 |
| MS.gene055909 | MS.gene067713 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene067713 | 0.805571 | 1.25E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene067713 | 0.845731 | 3.38E-59 | -1.69E-46 |
| MS.gene056040 | MS.gene067713 | 0.88482 | 1.38E-71 | -1.69E-46 |
| MS.gene056046 | MS.gene067713 | 0.878958 | 1.84E-69 | -1.69E-46 |
| MS.gene056166 | MS.gene067713 | 0.891123 | 5.29E-74 | -1.69E-46 |
| MS.gene056374 | MS.gene067713 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene067713 | 0.863527 | 2.34E-64 | -1.69E-46 |
| MS.gene056422 | MS.gene067713 | 0.81803 | 2.43E-52 | -1.69E-46 |
| MS.gene056446 | MS.gene067713 | 0.858142 | 1.01E-62 | -1.69E-46 |
| MS.gene056448 | MS.gene067713 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene067713 | 0.815328 | 9.78E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene067713 | 0.919447 | 4.45E-87 | -1.69E-46 |
| MS.gene056510 | MS.gene067713 | 0.895062 | 1.37E-75 | -1.69E-46 |
| MS.gene056511 | MS.gene067713 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene067713 | 0.862964 | 3.49E-64 | -1.69E-46 |
| MS.gene05666 | MS.gene067713 | 0.809109 | 2.23E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene067713 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene056878 | MS.gene067713 | 0.842098 | 3.18E-58 | -1.69E-46 |
| MS.gene057019 | MS.gene067713 | 0.816371 | 5.72E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene067713 | 0.866901 | 2.03E-65 | -1.69E-46 |
| MS.gene057086 | MS.gene067713 | 0.887478 | 1.38E-72 | -1.69E-46 |
| MS.gene057331 | MS.gene067713 | 0.81204 | 5.18E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene067713 | 0.848835 | 4.76E-60 | -1.69E-46 |
| MS.gene057658 | MS.gene067713 | 0.822999 | 1.75E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene067713 | 0.86083 | 1.57E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene067713 | 0.838068 | 3.58E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene067713 | 0.85305 | 3.09E-61 | -1.69E-46 |
| MS.gene057857 | MS.gene067713 | 0.842255 | 2.89E-58 | -1.69E-46 |
| MS.gene057872 | MS.gene067713 | 0.820474 | 6.73E-53 | -1.69E-46 |
| MS.gene057876 | MS.gene067713 | 0.813695 | 2.25E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene067713 | 0.89789 | 9.06E-77 | -1.69E-46 |
| MS.gene058130 | MS.gene067713 | 0.822092 | 2.85E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene067713 | 0.856372 | 3.36E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene067713 | -0.821448 | 4.02E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene067713 | -0.813141 | 2.97E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene067713 | -0.820366 | 7.12E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene067713 | -0.832835 | 7.54E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene067713 | 0.844457 | 7.47E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene067713 | 0.874145 | 8.49E-68 | -1.69E-46 |
| MS.gene058419 | MS.gene067713 | 0.866361 | 3.02E-65 | -1.69E-46 |
| MS.gene058420 | MS.gene067713 | 0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene067713 | 0.860841 | 1.56E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene067713 | 0.841298 | 5.17E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene067713 | 0.867074 | 1.79E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene067713 | 0.86181 | 7.89E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene067713 | 0.867218 | 1.61E-65 | -1.69E-46 |
| MS.gene05913 | MS.gene067713 | 0.837135 | 6.21E-57 | -1.69E-46 |
| MS.gene059305 | MS.gene067713 | 0.82243 | 2.38E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene067713 | 0.87597 | 2.02E-68 | -1.69E-46 |
| MS.gene059368 | MS.gene067713 | 0.832634 | 8.45E-56 | -1.69E-46 |
| MS.gene059455 | MS.gene067713 | 0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene067713 | 0.893692 | 4.96E-75 | -1.69E-46 |
| MS.gene059677 | MS.gene067713 | 0.840614 | 7.82E-58 | -1.69E-46 |
| MS.gene059680 | MS.gene067713 | 0.818311 | 2.09E-52 | -1.69E-46 |
| MS.gene059699 | MS.gene067713 | -0.808138 | 3.59E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene067713 | -0.82974 | 4.35E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene067713 | 0.871671 | 5.72E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene067713 | 0.828024 | 1.13E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene067713 | 0.831861 | 1.31E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene067713 | 0.840618 | 7.80E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene067713 | 0.907922 | 3.00E-81 | -1.69E-46 |
| MS.gene05995 | MS.gene067713 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene067713 | 0.849715 | 2.71E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene067713 | 0.902 | 1.52E-78 | -1.69E-46 |
| MS.gene06027 | MS.gene067713 | 0.82281 | 1.94E-53 | -1.69E-46 |
| MS.gene060295 | MS.gene067713 | 0.837793 | 4.22E-57 | -1.69E-46 |
| MS.gene060372 | MS.gene067713 | 0.833451 | 5.29E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene067713 | 0.856333 | 3.45E-62 | -1.69E-46 |
| MS.gene060593 | MS.gene067713 | -0.829095 | 6.24E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene067713 | -0.847046 | 1.48E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene067713 | 0.835696 | 1.44E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene067713 | 0.866006 | 3.91E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene067713 | 0.919957 | 2.35E-87 | -1.69E-46 |
| MS.gene06077 | MS.gene067713 | 0.885095 | 1.09E-71 | -1.69E-46 |
| MS.gene060835 | MS.gene067713 | 0.855078 | 8.03E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene067713 | 0.803623 | 3.19E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene067713 | 0.832154 | 1.11E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene067713 | 0.885836 | 5.77E-72 | -1.69E-46 |
| MS.gene060982 | MS.gene067713 | 0.912646 | 1.53E-83 | -1.69E-46 |
| MS.gene061044 | MS.gene067713 | -0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene067713 | 0.81628 | 6.00E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067713.t1 | MTR_4g053420 | 98.261 | 345 | 6 | 0 | 1 | 345 | 1 | 345 | 0.0 | 712 |
| MS.gene067713.t1 | MTR_4g056100 | 76.081 | 347 | 80 | 2 | 3 | 346 | 8 | 354 | 0.0 | 574 |
| MS.gene067713.t1 | MTR_1g107455 | 74.855 | 346 | 84 | 2 | 3 | 345 | 8 | 353 | 0.0 | 556 |
| MS.gene067713.t1 | MTR_4g056100 | 77.815 | 302 | 64 | 2 | 3 | 301 | 8 | 309 | 0.0 | 511 |
| MS.gene067713.t1 | MTR_1g108530 | 70.809 | 346 | 80 | 3 | 3 | 345 | 8 | 335 | 0.0 | 508 |
| MS.gene067713.t1 | MTR_4g056100 | 77.778 | 270 | 57 | 2 | 3 | 269 | 8 | 277 | 3.22e-162 | 456 |
| MS.gene067713.t1 | MTR_2g041340 | 61.633 | 245 | 67 | 3 | 3 | 244 | 8 | 228 | 5.74e-103 | 303 |
| MS.gene067713.t1 | MTR_4g045737 | 56.989 | 93 | 39 | 1 | 3 | 94 | 8 | 100 | 9.68e-30 | 110 |
| MS.gene067713.t1 | MTR_2g096660 | 29.123 | 285 | 164 | 9 | 14 | 296 | 38 | 286 | 3.35e-25 | 105 |
| MS.gene067713.t1 | MTR_4g063600 | 28.421 | 285 | 166 | 9 | 14 | 296 | 32 | 280 | 2.31e-24 | 102 |
| MS.gene067713.t1 | MTR_4g063600 | 27.719 | 285 | 165 | 9 | 14 | 296 | 32 | 277 | 6.35e-22 | 95.5 |
| MS.gene067713.t1 | MTR_1g088480 | 25.152 | 330 | 186 | 14 | 14 | 339 | 118 | 390 | 1.12e-18 | 87.4 |
| MS.gene067713.t1 | MTR_4g120030 | 23.547 | 327 | 191 | 11 | 16 | 339 | 113 | 383 | 5.12e-17 | 82.4 |
| MS.gene067713.t1 | MTR_4g045693 | 55.556 | 54 | 24 | 0 | 3 | 56 | 7 | 60 | 6.11e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067713.t1 | AT1G08200 | 75.504 | 347 | 82 | 2 | 2 | 345 | 6 | 352 | 0.0 | 568 |
| MS.gene067713.t1 | AT2G27860 | 74.640 | 347 | 85 | 2 | 2 | 345 | 6 | 352 | 0.0 | 558 |
| MS.gene067713.t1 | AT3G46440 | 28.421 | 285 | 166 | 8 | 14 | 296 | 29 | 277 | 4.53e-24 | 101 |
| MS.gene067713.t1 | AT3G46440 | 28.421 | 285 | 166 | 8 | 14 | 296 | 29 | 277 | 4.53e-24 | 101 |
| MS.gene067713.t1 | AT5G59290 | 28.421 | 285 | 166 | 9 | 14 | 296 | 1 | 249 | 6.06e-24 | 100 |
| MS.gene067713.t1 | AT5G59290 | 28.421 | 285 | 166 | 9 | 14 | 296 | 23 | 271 | 1.14e-23 | 100 |
| MS.gene067713.t1 | AT5G59290 | 28.421 | 285 | 166 | 9 | 14 | 296 | 30 | 278 | 1.16e-23 | 100 |
| MS.gene067713.t1 | AT5G59290 | 29.123 | 285 | 164 | 10 | 14 | 296 | 45 | 293 | 1.87e-23 | 100 |
| MS.gene067713.t1 | AT2G28760 | 29.123 | 285 | 164 | 10 | 14 | 296 | 31 | 279 | 2.53e-23 | 99.8 |
| MS.gene067713.t1 | AT2G28760 | 29.123 | 285 | 164 | 10 | 14 | 296 | 31 | 279 | 2.53e-23 | 99.8 |
| MS.gene067713.t1 | AT2G28760 | 29.123 | 285 | 164 | 10 | 14 | 296 | 31 | 279 | 2.53e-23 | 99.8 |
| MS.gene067713.t1 | AT2G28760 | 29.474 | 285 | 163 | 10 | 14 | 296 | 62 | 310 | 3.62e-23 | 99.8 |
| MS.gene067713.t1 | AT3G53520 | 27.353 | 340 | 185 | 16 | 14 | 346 | 120 | 404 | 1.79e-22 | 98.6 |
| MS.gene067713.t1 | AT3G53520 | 27.941 | 340 | 181 | 17 | 14 | 346 | 120 | 402 | 2.50e-20 | 92.0 |
| MS.gene067713.t1 | AT2G47650 | 25.455 | 330 | 196 | 13 | 14 | 339 | 121 | 404 | 4.52e-20 | 91.7 |
| MS.gene067713.t1 | AT3G62830 | 25.680 | 331 | 188 | 14 | 14 | 339 | 119 | 396 | 2.36e-19 | 89.4 |
| MS.gene067713.t1 | AT3G62830 | 25.680 | 331 | 188 | 14 | 14 | 339 | 119 | 396 | 2.36e-19 | 89.4 |
| MS.gene067713.t1 | AT2G47650 | 25.378 | 331 | 189 | 14 | 14 | 339 | 121 | 398 | 5.27e-19 | 88.2 |
| MS.gene067713.t1 | AT3G53520 | 27.451 | 255 | 146 | 11 | 14 | 264 | 120 | 339 | 9.88e-16 | 78.2 |
Find 82 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGTCCATTTGCTCTATC+AGG | 0.212687 | 4.2:+48936300 | None:intergenic |
| TTAACAGATACTTCATTATC+TGG | 0.251368 | 4.2:+48936261 | None:intergenic |
| ATGACAGACAGGCTCATTTA+TGG | 0.300625 | 4.2:-48936984 | MS.gene067713:intron |
| CTATTGTGAGACCTTATAAC+TGG | 0.307051 | 4.2:-48936681 | MS.gene067713:CDS |
| TTTCTACGTGTGAGGTCTTT+GGG | 0.341819 | 4.2:-48937407 | MS.gene067713:CDS |
| CTTGGTCCAATCCAGTTATA+AGG | 0.372591 | 4.2:+48936670 | None:intergenic |
| CCAGGAATGAAGTCCATTCT+TGG | 0.373462 | 4.2:+48936652 | None:intergenic |
| TGATATAGAGAAAAGTTCTC+TGG | 0.376155 | 4.2:+48936436 | None:intergenic |
| TATGGCTTTGTGAGATGTTT+CGG | 0.384939 | 4.2:+48937913 | None:intergenic |
| TGCAGAGTTGCTCAAGTTGA+AGG | 0.385548 | 4.2:+48935695 | None:intergenic |
| ACTAGCTGAGCTTATGATAA+AGG | 0.394087 | 4.2:-48936235 | MS.gene067713:intron |
| GCGTGATTGGTTTCCCGTCC+AGG | 0.404306 | 4.2:+48938002 | None:intergenic |
| CTGAAACAAGCTAAAACTCT+TGG | 0.409574 | 4.2:+48936604 | None:intergenic |
| CATATTGAGATCGGCGTGAT+TGG | 0.409720 | 4.2:+48937989 | None:intergenic |
| CCAAGAATGGACTTCATTCC+TGG | 0.411557 | 4.2:-48936652 | MS.gene067713:CDS |
| GACCATCTCTGTTTATGAAC+TGG | 0.420386 | 4.2:+48937026 | None:intergenic |
| TCCTTGATAAGTCTCATCCT+TGG | 0.421329 | 4.2:-48937856 | MS.gene067713:CDS |
| GGATTATAACACGCGGCCTT+TGG | 0.424145 | 4.2:-48937620 | MS.gene067713:CDS |
| AGAGGAGACATCAATGACTA+TGG | 0.439801 | 4.2:+48937895 | None:intergenic |
| CTGGTGATGATTGTCATGTC+AGG | 0.448491 | 4.2:+48936019 | None:intergenic |
| AAGCTTTGACGAGAGTTTCA+AGG | 0.460030 | 4.2:+48937786 | None:intergenic |
| TCTTTGAGCTTGTAATATTG+AGG | 0.462050 | 4.2:+48937074 | None:intergenic |
| CCTTGATAAGTCTCATCCTT+GGG | 0.467401 | 4.2:-48937855 | MS.gene067713:CDS |
| GTGAGACCTTATAACTGGAT+TGG | 0.470330 | 4.2:-48936676 | MS.gene067713:CDS |
| ATAGCTGAGCATGCGGAGAA+TGG | 0.470908 | 4.2:-48936715 | MS.gene067713:intron |
| GAGGTCTTTGGGAAGACAAT+TGG | 0.475078 | 4.2:-48937396 | MS.gene067713:CDS |
| TAACTGGATTGGACCAAGAA+TGG | 0.477010 | 4.2:-48936665 | MS.gene067713:CDS |
| GAGCCTCTCAAACTTGTTGA+TGG | 0.489187 | 4.2:-48936468 | MS.gene067713:CDS |
| GATAACCCTGATAGAGCAAA+TGG | 0.495280 | 4.2:-48936306 | MS.gene067713:CDS |
| TAACAGATACTTCATTATCT+GGG | 0.496503 | 4.2:+48936262 | None:intergenic |
| TGTACCTTTCTATACTCCTC+AGG | 0.497124 | 4.2:+48937363 | None:intergenic |
| TGAAACAAGCTAAAACTCTT+GGG | 0.503701 | 4.2:+48936605 | None:intergenic |
| AAGGTATATGCAAAGGTGGC+TGG | 0.511233 | 4.2:-48936127 | MS.gene067713:CDS |
| GACTTCATTCCTGGTGTGGA+TGG | 0.515549 | 4.2:-48936643 | MS.gene067713:CDS |
| TAATTTCATCGATGCGATCC+CGG | 0.523625 | 4.2:-48937584 | MS.gene067713:CDS |
| GATATAGAGAAAAGTTCTCT+GGG | 0.525949 | 4.2:+48936437 | None:intergenic |
| ATATGCATGATCGGCGGTGG+AGG | 0.526513 | 4.2:-48937971 | MS.gene067713:CDS |
| TCAATATGCATGATCGGCGG+TGG | 0.527392 | 4.2:-48937974 | MS.gene067713:CDS |
| TGGATCGAGTGAACCTGGAC+GGG | 0.529219 | 4.2:-48938015 | MS.gene067713:CDS |
| AAGGTTATGATGACAGTGAT+AGG | 0.529228 | 4.2:-48936048 | MS.gene067713:CDS |
| TTTCATGGATCGAGTGAACC+TGG | 0.529328 | 4.2:-48938020 | None:intergenic |
| TCCCTCTAGTCTATCAACTC+TGG | 0.531156 | 4.2:-48936098 | MS.gene067713:CDS |
| ACTCTTGGGACACCATCACT+TGG | 0.533733 | 4.2:+48936619 | None:intergenic |
| TGACAGAATACCAAGCTGCC+TGG | 0.535237 | 4.2:+48936000 | None:intergenic |
| GTTTGAGAGGCTCGCCACGC+AGG | 0.539294 | 4.2:+48936478 | None:intergenic |
| CCCAAGGATGAGACTTATCA+AGG | 0.539968 | 4.2:+48937855 | None:intergenic |
| CTATATCAAAGATGCAATTG+AGG | 0.540832 | 4.2:-48936421 | MS.gene067713:CDS |
| TTTCATTAAGGTATATGCAA+AGG | 0.543621 | 4.2:-48936134 | MS.gene067713:intron |
| ACAATCATCACCAGGCAGCT+TGG | 0.544555 | 4.2:-48936010 | MS.gene067713:intron |
| TGTGTCCATTTGCTCTATCA+GGG | 0.545363 | 4.2:+48936301 | None:intergenic |
| AAATGGACACATCTTTAATG+TGG | 0.547790 | 4.2:-48936289 | MS.gene067713:CDS |
| CATTAAGGTATATGCAAAGG+TGG | 0.552476 | 4.2:-48936131 | MS.gene067713:intron |
| GTGCAAAGCAGATGACAGAC+AGG | 0.570500 | 4.2:-48936995 | MS.gene067713:CDS |
| TCTTGCTGCGATTTGTACAC+CGG | 0.572521 | 4.2:-48937644 | MS.gene067713:CDS |
| TCCAGAGTTGATAGACTAGA+GGG | 0.573185 | 4.2:+48936097 | None:intergenic |
| GGTGTGGATGGTCCAAGTGA+TGG | 0.573258 | 4.2:-48936631 | MS.gene067713:CDS |
| CCGATCTCAATATGCATGAT+CGG | 0.574639 | 4.2:-48937980 | MS.gene067713:CDS |
| AATTGGTAGCTTTCTGCCTG+AGG | 0.575752 | 4.2:-48937379 | MS.gene067713:CDS |
| GTCCAGTTCATAAACAGAGA+TGG | 0.576229 | 4.2:-48937028 | MS.gene067713:CDS |
| CCGATCATGCATATTGAGAT+CGG | 0.578859 | 4.2:+48937980 | None:intergenic |
| TCTGCCTGAGGAGTATAGAA+AGG | 0.581092 | 4.2:-48937367 | MS.gene067713:intron |
| CCTCTCAAACTTGTTGATGG+TGG | 0.583373 | 4.2:-48936465 | MS.gene067713:CDS |
| ATGGATCGAGTGAACCTGGA+CGG | 0.589210 | 4.2:-48938016 | MS.gene067713:CDS |
| AATGGACACATCTTTAATGT+GGG | 0.590992 | 4.2:-48936288 | MS.gene067713:CDS |
| ATCGGCGGTGGAGGATTCAT+CGG | 0.591414 | 4.2:-48937962 | MS.gene067713:CDS |
| TCACTTGGACCATCCACACC+AGG | 0.596283 | 4.2:+48936634 | None:intergenic |
| ATCCAGAGTTGATAGACTAG+AGG | 0.603381 | 4.2:+48936096 | None:intergenic |
| TCATCTGATGAAACTCGATA+CGG | 0.612036 | 4.2:+48937828 | None:intergenic |
| CTGACATGACAATCATCACC+AGG | 0.624329 | 4.2:-48936018 | MS.gene067713:CDS |
| CCACCATCAACAAGTTTGAG+AGG | 0.628826 | 4.2:+48936465 | None:intergenic |
| GGCCGCGTGTTATAATCCGC+CGG | 0.636617 | 4.2:+48937625 | None:intergenic |
| AACTCGATACGGTTAGCCCA+AGG | 0.640625 | 4.2:+48937839 | None:intergenic |
| TAAATCTATAGCTGAGCATG+CGG | 0.640819 | 4.2:-48936722 | MS.gene067713:intron |
| TGGTGATGATTGTCATGTCA+GGG | 0.642852 | 4.2:+48936020 | None:intergenic |
| TTACTGTAAATAGTATCCAA+AGG | 0.643272 | 4.2:+48937604 | None:intergenic |
| AATGGACTTCATTCCTGGTG+TGG | 0.645922 | 4.2:-48936647 | MS.gene067713:CDS |
| TGCTGCGATTTGTACACCGG+CGG | 0.656615 | 4.2:-48937641 | MS.gene067713:CDS |
| TTTCATCGATGCGATCCCGG+TGG | 0.689547 | 4.2:-48937581 | MS.gene067713:intron |
| ATCTCAATATGCATGATCGG+CGG | 0.695000 | 4.2:-48937977 | MS.gene067713:CDS |
| AGAGTTGATAGACTAGAGGG+AGG | 0.706272 | 4.2:+48936100 | None:intergenic |
| TTGCTCTAGAATCTCCTGCG+TGG | 0.708460 | 4.2:-48936492 | MS.gene067713:intron |
| CACCGGCGGATTATAACACG+CGG | 0.709009 | 4.2:-48937627 | MS.gene067713:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAGTAAATAAAAAA+CGG | + | chr4.2:48935984-48936003 | None:intergenic | 10.0% |
| !! | TCATCAAAAATAAATAAAAA+TGG | + | chr4.2:48936016-48936035 | None:intergenic | 10.0% |
| !!! | AAAAAATTTAAAACATAACA+TGG | - | chr4.2:48936400-48936419 | MS.gene067713:intron | 10.0% |
| !! | CTAAAAATTAAACATATCTT+TGG | + | chr4.2:48936534-48936553 | None:intergenic | 15.0% |
| !!! | ATGAATGTAATCATATTTTT+CGG | - | chr4.2:48936474-48936493 | MS.gene067713:CDS | 15.0% |
| !!! | TTATTTCTCTTTAAAAACAA+AGG | + | chr4.2:48937529-48937548 | None:intergenic | 15.0% |
| !!! | TTCTAAATTAGTTTTTAGAT+AGG | - | chr4.2:48937497-48937516 | MS.gene067713:intron | 15.0% |
| !!! | ATTTTTGATGATGTTGTTTT+TGG | - | chr4.2:48936025-48936044 | MS.gene067713:CDS | 20.0% |
| !!! | CTCATTTTCTTTTTTCATTA+AGG | - | chr4.2:48937559-48937578 | MS.gene067713:intron | 20.0% |
| !!! | TTTCATGTTTTTATGAAATC+TGG | - | chr4.2:48936213-48936232 | MS.gene067713:intron | 20.0% |
| ! | ATTTGTATCTATGCATTGTT+TGG | - | chr4.2:48937735-48937754 | MS.gene067713:intron | 25.0% |
| ! | TAAAGAGAAATAAACAACCT+TGG | - | chr4.2:48937536-48937555 | MS.gene067713:intron | 25.0% |
| ! | TAACAGATACTTCATTATCT+GGG | + | chr4.2:48937446-48937465 | None:intergenic | 25.0% |
| ! | TTAACAGATACTTCATTATC+TGG | + | chr4.2:48937447-48937466 | None:intergenic | 25.0% |
| ! | TTAATATCAAGAGTCAGTTA+AGG | + | chr4.2:48936963-48936982 | None:intergenic | 25.0% |
| ! | TTACTGTAAATAGTATCCAA+AGG | + | chr4.2:48936104-48936123 | None:intergenic | 25.0% |
| ! | TTTCATTAAGGTATATGCAA+AGG | - | chr4.2:48937571-48937590 | MS.gene067713:intron | 25.0% |
| !! | CTGTTTATTCTTGTGATTTT+AGG | - | chr4.2:48937890-48937909 | MS.gene067713:CDS | 25.0% |
| !! | TTTTTATGAAATCTGGTTGA+TGG | - | chr4.2:48936220-48936239 | MS.gene067713:intron | 25.0% |
| !!! | TTATTCTTGTGATTTTAGGT+TGG | - | chr4.2:48937894-48937913 | MS.gene067713:CDS | 25.0% |
| AAAATAAAAAACCTACCACC+GGG | + | chr4.2:48936142-48936161 | None:intergenic | 30.0% | |
| AAATGGACACATCTTTAATG+TGG | - | chr4.2:48937416-48937435 | MS.gene067713:CDS | 30.0% | |
| AATGGACACATCTTTAATGT+GGG | - | chr4.2:48937417-48937436 | MS.gene067713:CDS | 30.0% | |
| ATGGTTTCAATTTGACGTTT+CGG | - | chr4.2:48936891-48936910 | MS.gene067713:intron | 30.0% | |
| ATGTCTGATGTTGATATTGA+AGG | + | chr4.2:48937958-48937977 | None:intergenic | 30.0% | |
| CAAAATAAAAAACCTACCAC+CGG | + | chr4.2:48936143-48936162 | None:intergenic | 30.0% | |
| CTATATCAAAGATGCAATTG+AGG | - | chr4.2:48937284-48937303 | MS.gene067713:intron | 30.0% | |
| GATATAGAGAAAAGTTCTCT+GGG | + | chr4.2:48937271-48937290 | None:intergenic | 30.0% | |
| TACAGCAAGAATCTCTTTAT+GGG | - | chr4.2:48936361-48936380 | MS.gene067713:intron | 30.0% | |
| TCTTTGAGCTTGTAATATTG+AGG | + | chr4.2:48936634-48936653 | None:intergenic | 30.0% | |
| TGAAAAAAGAAAATGAGCCA+AGG | + | chr4.2:48937556-48937575 | None:intergenic | 30.0% | |
| TGAAACAAGCTAAAACTCTT+GGG | + | chr4.2:48937103-48937122 | None:intergenic | 30.0% | |
| TGATATAGAGAAAAGTTCTC+TGG | + | chr4.2:48937272-48937291 | None:intergenic | 30.0% | |
| TGTCTGATGTTGATATTGAA+GGG | + | chr4.2:48937957-48937976 | None:intergenic | 30.0% | |
| TTGAAGCTTCAACAAAATCA+CGG | + | chr4.2:48937794-48937813 | None:intergenic | 30.0% | |
| ! | AAGCTTTGTGAAAAAAACAG+CGG | + | chr4.2:48937192-48937211 | None:intergenic | 30.0% |
| AAAATCACAATGTGCAACAG+TGG | + | chr4.2:48937836-48937855 | None:intergenic | 35.0% | |
| AACACAAATTTGCATCATGC+AGG | - | chr4.2:48936606-48936625 | MS.gene067713:CDS | 35.0% | |
| AAGGTTATGATGACAGTGAT+AGG | - | chr4.2:48937657-48937676 | MS.gene067713:intron | 35.0% | |
| ACTAGCTGAGCTTATGATAA+AGG | - | chr4.2:48937470-48937489 | MS.gene067713:intron | 35.0% | |
| AGTTCATCAAGAGATGTCTT+TGG | + | chr4.2:48937923-48937942 | None:intergenic | 35.0% | |
| CATTAAGGTATATGCAAAGG+TGG | - | chr4.2:48937574-48937593 | MS.gene067713:intron | 35.0% | |
| CGTCAAATTGAAACCATGTA+AGG | + | chr4.2:48936888-48936907 | None:intergenic | 35.0% | |
| CTATTGTGAGACCTTATAAC+TGG | - | chr4.2:48937024-48937043 | MS.gene067713:CDS | 35.0% | |
| CTGAAACAAGCTAAAACTCT+TGG | + | chr4.2:48937104-48937123 | None:intergenic | 35.0% | |
| GGCTCATTTATGGTAAACAA+AGG | - | chr4.2:48936731-48936750 | MS.gene067713:intron | 35.0% | |
| GTACAGCAAGAATCTCTTTA+TGG | - | chr4.2:48936360-48936379 | MS.gene067713:intron | 35.0% | |
| TAAATCTATAGCTGAGCATG+CGG | - | chr4.2:48936983-48937002 | MS.gene067713:intron | 35.0% | |
| TATGCTATCATGTAACATGC+AGG | - | chr4.2:48937377-48937396 | MS.gene067713:CDS | 35.0% | |
| TCATCTGATGAAACTCGATA+CGG | + | chr4.2:48935880-48935899 | None:intergenic | 35.0% | |
| TGAACTGGACCAAAAATACA+AGG | + | chr4.2:48936667-48936686 | None:intergenic | 35.0% | |
| ! | GATGTGAGTCCTTGTATTTT+TGG | - | chr4.2:48936655-48936674 | MS.gene067713:CDS | 35.0% |
| ! | GTGAGTTCAGAAGTTTTCTA+TGG | - | chr4.2:48937632-48937651 | MS.gene067713:CDS | 35.0% |
| ! | TCAGAAGTTTTCTATGGCAA+AGG | - | chr4.2:48937638-48937657 | MS.gene067713:CDS | 35.0% |
| !! | GAGATGATTGATTTTCTCAG+AGG | + | chr4.2:48935831-48935850 | None:intergenic | 35.0% |
| !! | TATGGCTTTGTGAGATGTTT+CGG | + | chr4.2:48935795-48935814 | None:intergenic | 35.0% |
| !!! | ATTTTTCGGTGTCATGATGT+TGG | - | chr4.2:48936488-48936507 | MS.gene067713:intron | 35.0% |
| !!! | CGGTGGTAGGTTTTTTATTT+TGG | - | chr4.2:48936141-48936160 | MS.gene067713:intron | 35.0% |
| AGAGGAGACATCAATGACTA+TGG | + | chr4.2:48935813-48935832 | None:intergenic | 40.0% | |
| ATCTCAATATGCATGATCGG+CGG | - | chr4.2:48935728-48935747 | MS.gene067713:CDS | 40.0% | |
| ATGACAGACAGGCTCATTTA+TGG | - | chr4.2:48936721-48936740 | MS.gene067713:intron | 40.0% | |
| ATGTGTCCATTTGCTCTATC+AGG | + | chr4.2:48937408-48937427 | None:intergenic | 40.0% | |
| CCGATCATGCATATTGAGAT+CGG | + | chr4.2:48935728-48935747 | None:intergenic | 40.0% | |
| CCGATCTCAATATGCATGAT+CGG | - | chr4.2:48935725-48935744 | MS.gene067713:CDS | 40.0% | |
| CCTTGATAAGTCTCATCCTT+GGG | - | chr4.2:48935850-48935869 | MS.gene067713:intron | 40.0% | |
| CTTGGTCCAATCCAGTTATA+AGG | + | chr4.2:48937038-48937057 | None:intergenic | 40.0% | |
| GACATCTCTTGATGAACTGT+TGG | - | chr4.2:48937925-48937944 | MS.gene067713:CDS | 40.0% | |
| GACCATCTCTGTTTATGAAC+TGG | + | chr4.2:48936682-48936701 | None:intergenic | 40.0% | |
| GATAACCCTGATAGAGCAAA+TGG | - | chr4.2:48937399-48937418 | MS.gene067713:CDS | 40.0% | |
| GTCCAGTTCATAAACAGAGA+TGG | - | chr4.2:48936677-48936696 | MS.gene067713:CDS | 40.0% | |
| GTGAGACCTTATAACTGGAT+TGG | - | chr4.2:48937029-48937048 | MS.gene067713:CDS | 40.0% | |
| TAATTTCATCGATGCGATCC+CGG | - | chr4.2:48936121-48936140 | MS.gene067713:CDS | 40.0% | |
| TCAATGTCAGTATGTGTGTC+TGG | + | chr4.2:48936805-48936824 | None:intergenic | 40.0% | |
| TCCTTGATAAGTCTCATCCT+TGG | - | chr4.2:48935849-48935868 | MS.gene067713:intron | 40.0% | |
| TGTACCTTTCTATACTCCTC+AGG | + | chr4.2:48936345-48936364 | None:intergenic | 40.0% | |
| TGTGTCCATTTGCTCTATCA+GGG | + | chr4.2:48937407-48937426 | None:intergenic | 40.0% | |
| TGTTGGACACTTACATGTGT+CGG | - | chr4.2:48936505-48936524 | MS.gene067713:intron | 40.0% | |
| TTTCTACGTGTGAGGTCTTT+GGG | - | chr4.2:48936298-48936317 | MS.gene067713:CDS | 40.0% | |
| ! | AAGCTTTGACGAGAGTTTCA+AGG | + | chr4.2:48935922-48935941 | None:intergenic | 40.0% |
| ! | TAACTGGATTGGACCAAGAA+TGG | - | chr4.2:48937040-48937059 | MS.gene067713:CDS | 40.0% |
| ! | TGGTGATGATTGTCATGTCA+GGG | + | chr4.2:48937688-48937707 | None:intergenic | 40.0% |
| ! | TGTTTCGGACATCAGCTTTT+CGG | + | chr4.2:48935780-48935799 | None:intergenic | 40.0% |
| ! | TTTTCTACGTGTGAGGTCTT+TGG | - | chr4.2:48936297-48936316 | MS.gene067713:CDS | 40.0% |
| !! | ATCCAGAGTTGATAGACTAG+AGG | + | chr4.2:48937612-48937631 | None:intergenic | 40.0% |
| !! | GATTCACTTTTCTACGTGTG+AGG | - | chr4.2:48936290-48936309 | MS.gene067713:CDS | 40.0% |
| !! | TCCAGAGTTGATAGACTAGA+GGG | + | chr4.2:48937611-48937630 | None:intergenic | 40.0% |
| AAGGTATATGCAAAGGTGGC+TGG | - | chr4.2:48937578-48937597 | MS.gene067713:intron | 45.0% | |
| CATATTGAGATCGGCGTGAT+TGG | + | chr4.2:48935719-48935738 | None:intergenic | 45.0% | |
| CCACCATCAACAAGTTTGAG+AGG | + | chr4.2:48937243-48937262 | None:intergenic | 45.0% | |
| CCAGGAATGAAGTCCATTCT+TGG | + | chr4.2:48937056-48937075 | None:intergenic | 45.0% | |
| CCCAAGGATGAGACTTATCA+AGG | + | chr4.2:48935853-48935872 | None:intergenic | 45.0% | |
| CGTGAACAAGAAACAGAAGC+AGG | + | chr4.2:48937144-48937163 | None:intergenic | 45.0% | |
| CTGACATGACAATCATCACC+AGG | - | chr4.2:48937687-48937706 | MS.gene067713:intron | 45.0% | |
| TCAGTGTCAGACACCTTACA+TGG | - | chr4.2:48936872-48936891 | MS.gene067713:intron | 45.0% | |
| TCCCTCTAGTCTATCAACTC+TGG | - | chr4.2:48937607-48937626 | MS.gene067713:CDS | 45.0% | |
| TCTTGCTGCGATTTGTACAC+CGG | - | chr4.2:48936061-48936080 | MS.gene067713:CDS | 45.0% | |
| ! | AATGGACTTCATTCCTGGTG+TGG | - | chr4.2:48937058-48937077 | MS.gene067713:CDS | 45.0% |
| ! | AATTGGTAGCTTTCTGCCTG+AGG | - | chr4.2:48936326-48936345 | MS.gene067713:intron | 45.0% |
| ! | CCAAGAATGGACTTCATTCC+TGG | - | chr4.2:48937053-48937072 | MS.gene067713:CDS | 45.0% |
| ! | CTGGTGATGATTGTCATGTC+AGG | + | chr4.2:48937689-48937708 | None:intergenic | 45.0% |
| ! | GAGGTCTTTGGGAAGACAAT+TGG | - | chr4.2:48936309-48936328 | MS.gene067713:CDS | 45.0% |
| ! | TCTGCCTGAGGAGTATAGAA+AGG | - | chr4.2:48936338-48936357 | MS.gene067713:intron | 45.0% |
| !! | AGAGTTGATAGACTAGAGGG+AGG | + | chr4.2:48937608-48937627 | None:intergenic | 45.0% |
| !! | CCTCTCAAACTTGTTGATGG+TGG | - | chr4.2:48937240-48937259 | MS.gene067713:intron | 45.0% |
| !! | GAGCCTCTCAAACTTGTTGA+TGG | - | chr4.2:48937237-48937256 | MS.gene067713:intron | 45.0% |
| !! | TGCAGAGTTGCTCAAGTTGA+AGG | + | chr4.2:48938013-48938032 | None:intergenic | 45.0% |
| ACAATCATCACCAGGCAGCT+TGG | - | chr4.2:48937695-48937714 | MS.gene067713:intron | 50.0% | |
| ACTCTTGGGACACCATCACT+TGG | + | chr4.2:48937089-48937108 | None:intergenic | 50.0% | |
| ATAGCTGAGCATGCGGAGAA+TGG | - | chr4.2:48936990-48937009 | MS.gene067713:CDS | 50.0% | |
| ATGGATCGAGTGAACCTGGA+CGG | - | chr4.2:48935689-48935708 | MS.gene067713:CDS | 50.0% | |
| GACTTCATTCCTGGTGTGGA+TGG | - | chr4.2:48937062-48937081 | MS.gene067713:CDS | 50.0% | |
| GGATTATAACACGCGGCCTT+TGG | - | chr4.2:48936085-48936104 | MS.gene067713:CDS | 50.0% | |
| GTGCAAAGCAGATGACAGAC+AGG | - | chr4.2:48936710-48936729 | MS.gene067713:CDS | 50.0% | |
| TCAATATGCATGATCGGCGG+TGG | - | chr4.2:48935731-48935750 | MS.gene067713:CDS | 50.0% | |
| TGACAGAATACCAAGCTGCC+TGG | + | chr4.2:48937708-48937727 | None:intergenic | 50.0% | |
| ! | AACTCGATACGGTTAGCCCA+AGG | + | chr4.2:48935869-48935888 | None:intergenic | 50.0% |
| !! | TTGCTCTAGAATCTCCTGCG+TGG | - | chr4.2:48937213-48937232 | MS.gene067713:intron | 50.0% |
| ATATGCATGATCGGCGGTGG+AGG | - | chr4.2:48935734-48935753 | MS.gene067713:CDS | 55.0% | |
| ATCGGCGGTGGAGGATTCAT+CGG | - | chr4.2:48935743-48935762 | MS.gene067713:intron | 55.0% | |
| GGTGTGGATGGTCCAAGTGA+TGG | - | chr4.2:48937074-48937093 | MS.gene067713:CDS | 55.0% | |
| TCACTTGGACCATCCACACC+AGG | + | chr4.2:48937074-48937093 | None:intergenic | 55.0% | |
| TGCTGCGATTTGTACACCGG+CGG | - | chr4.2:48936064-48936083 | MS.gene067713:CDS | 55.0% | |
| TGGATCGAGTGAACCTGGAC+GGG | - | chr4.2:48935690-48935709 | MS.gene067713:CDS | 55.0% | |
| TTTCATCGATGCGATCCCGG+TGG | - | chr4.2:48936124-48936143 | MS.gene067713:CDS | 55.0% | |
| ! | CGGACATCAGCTTTTCGGTG+AGG | + | chr4.2:48935775-48935794 | None:intergenic | 55.0% |
| !! | CACCGGCGGATTATAACACG+CGG | - | chr4.2:48936078-48936097 | MS.gene067713:CDS | 55.0% |
| ATCGATGCGATCCCGGTGGT+AGG | - | chr4.2:48936128-48936147 | MS.gene067713:intron | 60.0% | |
| GGCCGCGTGTTATAATCCGC+CGG | + | chr4.2:48936083-48936102 | None:intergenic | 60.0% | |
| !! | GCGTGATTGGTTTCCCGTCC+AGG | + | chr4.2:48935706-48935725 | None:intergenic | 60.0% |
| GTTTGAGAGGCTCGCCACGC+AGG | + | chr4.2:48937230-48937249 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 48935689 | 48938038 | 48935689 | ID=MS.gene067713 |
| chr4.2 | mRNA | 48935689 | 48938038 | 48935689 | ID=MS.gene067713.t1;Parent=MS.gene067713 |
| chr4.2 | exon | 48937778 | 48938038 | 48937778 | ID=MS.gene067713.t1.exon1;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48937778 | 48938038 | 48937778 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48937582 | 48937674 | 48937582 | ID=MS.gene067713.t1.exon2;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48937582 | 48937674 | 48937582 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48937368 | 48937469 | 48937368 | ID=MS.gene067713.t1.exon3;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48937368 | 48937469 | 48937368 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48936985 | 48937099 | 48936985 | ID=MS.gene067713.t1.exon4;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48936985 | 48937099 | 48936985 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48936600 | 48936733 | 48936600 | ID=MS.gene067713.t1.exon5;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48936600 | 48936733 | 48936600 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48936404 | 48936505 | 48936404 | ID=MS.gene067713.t1.exon6;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48936404 | 48936505 | 48936404 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48936236 | 48936328 | 48936236 | ID=MS.gene067713.t1.exon7;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48936236 | 48936328 | 48936236 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48936011 | 48936146 | 48936011 | ID=MS.gene067713.t1.exon8;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48936011 | 48936146 | 48936011 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| chr4.2 | exon | 48935689 | 48935753 | 48935689 | ID=MS.gene067713.t1.exon9;Parent=MS.gene067713.t1 |
| chr4.2 | CDS | 48935689 | 48935753 | 48935689 | ID=cds.MS.gene067713.t1;Parent=MS.gene067713.t1 |
| Gene Sequence |
| Protein sequence |
