Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38309.t1 | RHN45460.1 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 2.00E-244 | 854.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38309.t1 | Q8GZ38 | 48.5 | 495 | 152 | 18 | 1 | 490 | 1 | 397 | 1.6e-64 | 248.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38309.t1 | A0A396GWP6 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 1.5e-244 | 854.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38309.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38309 | 0.831617 | 1.51E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene38309 | 0.817936 | 2.55E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene38309 | 0.845851 | 3.14E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene38309 | 0.904685 | 9.48E-80 | -1.69E-46 |
| MS.gene049285 | MS.gene38309 | 0.859093 | 5.25E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene38309 | 0.879454 | 1.23E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene38309 | 0.811958 | 5.40E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene38309 | 0.896874 | 2.43E-76 | -1.69E-46 |
| MS.gene049552 | MS.gene38309 | 0.817445 | 3.29E-52 | -1.69E-46 |
| MS.gene049600 | MS.gene38309 | 0.821048 | 4.97E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene38309 | 0.855333 | 6.77E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene38309 | 0.823281 | 1.51E-53 | -1.69E-46 |
| MS.gene049656 | MS.gene38309 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene38309 | 0.825733 | 3.99E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene38309 | 0.887012 | 2.07E-72 | -1.69E-46 |
| MS.gene050163 | MS.gene38309 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene38309 | 0.867078 | 1.78E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene38309 | 0.85119 | 1.04E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene38309 | 0.876724 | 1.11E-68 | -1.69E-46 |
| MS.gene050380 | MS.gene38309 | -0.803871 | 2.83E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene38309 | -0.824284 | 8.77E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene38309 | 0.847638 | 1.02E-59 | -1.69E-46 |
| MS.gene050499 | MS.gene38309 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene38309 | 0.878152 | 3.54E-69 | -1.69E-46 |
| MS.gene050504 | MS.gene38309 | 0.872644 | 2.71E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene38309 | 0.838834 | 2.27E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene38309 | 0.812854 | 3.44E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene38309 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene38309 | 0.845448 | 4.04E-59 | -1.69E-46 |
| MS.gene050593 | MS.gene38309 | 0.825733 | 3.99E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene38309 | 0.847784 | 9.29E-60 | -1.69E-46 |
| MS.gene050647 | MS.gene38309 | -0.807624 | 4.62E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene38309 | 0.840844 | 6.81E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene38309 | 0.849302 | 3.53E-60 | -1.69E-46 |
| MS.gene050686 | MS.gene38309 | 0.813807 | 2.12E-51 | -1.69E-46 |
| MS.gene050697 | MS.gene38309 | 0.821426 | 4.06E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene38309 | 0.829238 | 5.76E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene38309 | 0.856853 | 2.43E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene38309 | 0.876192 | 1.70E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene38309 | 0.849893 | 2.41E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene38309 | 0.887237 | 1.70E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene38309 | 0.891798 | 2.86E-74 | -1.69E-46 |
| MS.gene050950 | MS.gene38309 | 0.858337 | 8.83E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene38309 | 0.864119 | 1.53E-64 | -1.69E-46 |
| MS.gene05104 | MS.gene38309 | -0.80313 | 4.04E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene38309 | -0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene05118 | MS.gene38309 | 0.831882 | 1.30E-55 | -1.69E-46 |
| MS.gene051268 | MS.gene38309 | 0.84152 | 4.52E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene38309 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene051509 | MS.gene38309 | 0.883294 | 5.07E-71 | -1.69E-46 |
| MS.gene051551 | MS.gene38309 | 0.868365 | 6.89E-66 | -1.69E-46 |
| MS.gene051560 | MS.gene38309 | 0.838254 | 3.21E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene38309 | 0.808633 | 2.81E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene38309 | 0.815777 | 7.77E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene38309 | 0.851949 | 6.36E-61 | -1.69E-46 |
| MS.gene051941 | MS.gene38309 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene052066 | MS.gene38309 | 0.839674 | 1.38E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene38309 | 0.867424 | 1.38E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene38309 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene38309 | 0.851839 | 6.83E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene38309 | 0.850195 | 1.99E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene38309 | 0.809685 | 1.67E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene38309 | 0.856683 | 2.72E-62 | -1.69E-46 |
| MS.gene052504 | MS.gene38309 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene38309 | 0.808276 | 3.35E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene38309 | 0.842765 | 2.12E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene38309 | 0.833777 | 4.39E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene38309 | 0.850489 | 1.64E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene38309 | 0.86132 | 1.11E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene38309 | 0.849396 | 3.32E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene38309 | 0.834198 | 3.44E-56 | -1.69E-46 |
| MS.gene053018 | MS.gene38309 | 0.853798 | 1.88E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene38309 | 0.861102 | 1.30E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene38309 | 0.809633 | 1.72E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene38309 | 0.88053 | 5.09E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene38309 | 0.881741 | 1.87E-70 | -1.69E-46 |
| MS.gene053420 | MS.gene38309 | -0.838186 | 3.34E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene38309 | 0.874441 | 6.74E-68 | -1.69E-46 |
| MS.gene053449 | MS.gene38309 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene38309 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene38309 | 0.832929 | 7.14E-56 | -1.69E-46 |
| MS.gene053505 | MS.gene38309 | 0.835063 | 2.09E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene38309 | 0.918694 | 1.14E-86 | -1.69E-46 |
| MS.gene053626 | MS.gene38309 | 0.891076 | 5.53E-74 | -1.69E-46 |
| MS.gene053632 | MS.gene38309 | 0.81063 | 1.05E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene38309 | 0.816858 | 4.45E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene38309 | 0.848102 | 7.59E-60 | -1.69E-46 |
| MS.gene053912 | MS.gene38309 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene38309 | 0.845062 | 5.13E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene38309 | 0.894693 | 1.94E-75 | -1.69E-46 |
| MS.gene054408 | MS.gene38309 | 0.837726 | 4.38E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene38309 | 0.881902 | 1.63E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene38309 | 0.818979 | 1.48E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene38309 | 0.858134 | 1.01E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene38309 | -0.828412 | 9.12E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene38309 | -0.813455 | 2.54E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene38309 | 0.838268 | 3.18E-57 | -1.69E-46 |
| MS.gene054742 | MS.gene38309 | -0.803301 | 3.72E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene38309 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene38309 | 0.82249 | 2.30E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene38309 | 0.869861 | 2.25E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene38309 | 0.849794 | 2.57E-60 | -1.69E-46 |
| MS.gene055154 | MS.gene38309 | -0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene38309 | 0.859685 | 3.49E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene38309 | 0.814349 | 1.61E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene38309 | 0.8595 | 3.96E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene38309 | 0.855485 | 6.11E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene38309 | 0.841704 | 4.04E-58 | -1.69E-46 |
| MS.gene055629 | MS.gene38309 | 0.880635 | 4.66E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene38309 | 0.844271 | 8.38E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene38309 | 0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene38309 | 0.830252 | 3.26E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene38309 | 0.808074 | 3.70E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene38309 | 0.807755 | 4.33E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene38309 | 0.856486 | 3.11E-62 | -1.69E-46 |
| MS.gene055909 | MS.gene38309 | 0.835708 | 1.43E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene38309 | 0.830621 | 2.65E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene38309 | 0.83243 | 9.50E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene38309 | 0.834097 | 3.65E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene38309 | 0.851576 | 8.11E-61 | -1.69E-46 |
| MS.gene056046 | MS.gene38309 | 0.842252 | 2.90E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene38309 | 0.873312 | 1.62E-67 | -1.69E-46 |
| MS.gene056374 | MS.gene38309 | 0.837054 | 6.52E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene38309 | 0.846064 | 2.75E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene38309 | 0.883853 | 3.16E-71 | -1.69E-46 |
| MS.gene056446 | MS.gene38309 | 0.873457 | 1.45E-67 | -1.69E-46 |
| MS.gene056448 | MS.gene38309 | 0.863452 | 2.46E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene38309 | 0.890662 | 8.05E-74 | -1.69E-46 |
| MS.gene056510 | MS.gene38309 | 0.859187 | 4.92E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene38309 | 0.813999 | 1.93E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene38309 | 0.870327 | 1.59E-66 | -1.69E-46 |
| MS.gene05666 | MS.gene38309 | 0.813777 | 2.16E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene38309 | 0.8488 | 4.87E-60 | -1.69E-46 |
| MS.gene057019 | MS.gene38309 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene38309 | 0.84871 | 5.15E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene38309 | 0.876758 | 1.08E-68 | -1.69E-46 |
| MS.gene057331 | MS.gene38309 | 0.831321 | 1.78E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene38309 | 0.845166 | 4.81E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene38309 | 0.85423 | 1.41E-61 | -1.69E-46 |
| MS.gene057831 | MS.gene38309 | 0.807246 | 5.55E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene38309 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene38309 | 0.899659 | 1.59E-77 | -1.69E-46 |
| MS.gene057926 | MS.gene38309 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene058075 | MS.gene38309 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene38309 | 0.869843 | 2.28E-66 | -1.69E-46 |
| MS.gene058157 | MS.gene38309 | 0.85651 | 3.06E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene38309 | -0.813501 | 2.48E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene38309 | -0.815859 | 7.45E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene38309 | -0.819267 | 1.27E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene38309 | 0.810694 | 1.01E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene38309 | 0.874851 | 4.89E-68 | -1.69E-46 |
| MS.gene058419 | MS.gene38309 | 0.860524 | 1.95E-63 | -1.69E-46 |
| MS.gene058420 | MS.gene38309 | 0.812941 | 3.29E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene38309 | 0.831077 | 2.05E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene38309 | 0.846882 | 1.64E-59 | -1.69E-46 |
| MS.gene058691 | MS.gene38309 | -0.806548 | 7.80E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene38309 | 0.835914 | 1.27E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene38309 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene38309 | 0.807823 | 4.19E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene38309 | 0.86026 | 2.34E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene38309 | 0.840541 | 8.17E-58 | -1.69E-46 |
| MS.gene059037 | MS.gene38309 | -0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene38309 | 0.839794 | 1.28E-57 | -1.69E-46 |
| MS.gene059223 | MS.gene38309 | -0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene38309 | 0.851758 | 7.20E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene38309 | 0.885658 | 6.72E-72 | -1.69E-46 |
| MS.gene059368 | MS.gene38309 | 0.8566 | 2.88E-62 | -1.69E-46 |
| MS.gene059517 | MS.gene38309 | 0.844528 | 7.15E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene38309 | 0.868055 | 8.67E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene38309 | 0.833149 | 6.30E-56 | -1.69E-46 |
| MS.gene059680 | MS.gene38309 | 0.835931 | 1.26E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene38309 | -0.80056 | 1.36E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene38309 | 0.822561 | 2.22E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene38309 | 0.844465 | 7.44E-59 | -1.69E-46 |
| MS.gene059837 | MS.gene38309 | 0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene38309 | 0.90184 | 1.78E-78 | -1.69E-46 |
| MS.gene06000 | MS.gene38309 | 0.865172 | 7.16E-65 | -1.69E-46 |
| MS.gene060372 | MS.gene38309 | 0.843879 | 1.07E-58 | -1.69E-46 |
| MS.gene060482 | MS.gene38309 | 0.886133 | 4.46E-72 | -1.69E-46 |
| MS.gene060593 | MS.gene38309 | -0.805216 | 1.49E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene38309 | -0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene38309 | 0.814028 | 1.90E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene38309 | 0.825517 | 4.49E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene38309 | 0.884614 | 1.65E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene38309 | 0.872968 | 2.12E-67 | -1.69E-46 |
| MS.gene060804 | MS.gene38309 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene38309 | 0.838441 | 2.87E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene38309 | 0.845831 | 3.18E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene38309 | 0.835102 | 2.04E-56 | -1.69E-46 |
| MS.gene06097 | MS.gene38309 | 0.879092 | 1.65E-69 | -1.69E-46 |
| MS.gene060982 | MS.gene38309 | 0.876105 | 1.82E-68 | -1.69E-46 |
| MS.gene061134 | MS.gene38309 | 0.845952 | 2.95E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene38309 | 0.800204 | 1.61E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38309.t1 | MTR_7g039110 | 98.806 | 335 | 4 | 0 | 1 | 335 | 1 | 335 | 0.0 | 691 |
| MS.gene38309.t1 | MTR_1g084980 | 51.351 | 111 | 50 | 2 | 268 | 375 | 434 | 543 | 2.84e-24 | 107 |
| MS.gene38309.t1 | MTR_7g099540 | 49.167 | 120 | 41 | 2 | 284 | 401 | 237 | 338 | 1.79e-23 | 103 |
| MS.gene38309.t1 | MTR_1g069155 | 59.341 | 91 | 31 | 2 | 284 | 371 | 301 | 388 | 4.90e-23 | 102 |
| MS.gene38309.t1 | MTR_1g019240 | 70.968 | 62 | 18 | 0 | 298 | 359 | 86 | 147 | 7.70e-23 | 98.2 |
| MS.gene38309.t1 | MTR_3g449770 | 39.535 | 172 | 68 | 5 | 263 | 433 | 278 | 414 | 2.22e-22 | 100 |
| MS.gene38309.t1 | MTR_7g099540 | 58.889 | 90 | 32 | 2 | 284 | 371 | 237 | 323 | 2.78e-22 | 99.8 |
| MS.gene38309.t1 | MTR_5g017040 | 41.129 | 124 | 59 | 3 | 307 | 429 | 115 | 225 | 1.38e-18 | 87.4 |
| MS.gene38309.t1 | MTR_7g111320 | 31.739 | 230 | 120 | 7 | 260 | 455 | 396 | 622 | 2.78e-18 | 88.6 |
| MS.gene38309.t1 | MTR_7g110810 | 33.735 | 166 | 86 | 4 | 283 | 431 | 181 | 339 | 1.15e-16 | 82.0 |
| MS.gene38309.t1 | MTR_4g131160 | 53.030 | 66 | 31 | 0 | 294 | 359 | 193 | 258 | 2.92e-15 | 77.8 |
| MS.gene38309.t1 | MTR_4g131160 | 53.030 | 66 | 31 | 0 | 294 | 359 | 196 | 261 | 3.22e-15 | 77.8 |
| MS.gene38309.t1 | MTR_1g080890 | 48.438 | 64 | 33 | 0 | 297 | 360 | 193 | 256 | 8.47e-13 | 70.1 |
| MS.gene38309.t1 | MTR_5g048860 | 32.500 | 160 | 69 | 6 | 253 | 384 | 325 | 473 | 2.69e-12 | 69.3 |
| MS.gene38309.t1 | MTR_3g116770 | 34.014 | 147 | 75 | 5 | 297 | 438 | 191 | 320 | 5.87e-12 | 67.8 |
| MS.gene38309.t1 | MTR_3g116770 | 34.014 | 147 | 75 | 5 | 297 | 438 | 191 | 320 | 6.17e-12 | 67.8 |
| MS.gene38309.t1 | MTR_4g070320 | 31.111 | 225 | 110 | 14 | 280 | 467 | 116 | 332 | 9.40e-12 | 66.6 |
| MS.gene38309.t1 | MTR_1g084980 | 43.373 | 83 | 46 | 1 | 268 | 350 | 434 | 515 | 1.36e-11 | 67.0 |
| MS.gene38309.t1 | MTR_1g017350 | 36.842 | 95 | 58 | 2 | 297 | 390 | 260 | 353 | 2.70e-11 | 65.9 |
| MS.gene38309.t1 | MTR_1g017350 | 36.842 | 95 | 58 | 2 | 297 | 390 | 260 | 353 | 2.77e-11 | 65.9 |
| MS.gene38309.t1 | MTR_1g017350 | 48.438 | 64 | 32 | 1 | 297 | 359 | 260 | 323 | 9.61e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38309.t1 | AT4G00050 | 45.661 | 484 | 158 | 19 | 1 | 478 | 1 | 385 | 2.49e-102 | 312 |
| MS.gene38309.t1 | AT4G00050 | 44.583 | 480 | 159 | 20 | 1 | 472 | 1 | 381 | 2.37e-94 | 291 |
| MS.gene38309.t1 | AT4G00050 | 49.133 | 346 | 107 | 14 | 139 | 478 | 1 | 283 | 1.46e-76 | 242 |
| MS.gene38309.t1 | AT2G20180 | 29.047 | 451 | 233 | 16 | 1 | 434 | 1 | 381 | 2.09e-27 | 115 |
| MS.gene38309.t1 | AT2G20180 | 29.047 | 451 | 233 | 16 | 1 | 434 | 1 | 381 | 2.09e-27 | 115 |
| MS.gene38309.t1 | AT2G20180 | 29.047 | 451 | 233 | 16 | 1 | 434 | 1 | 381 | 2.09e-27 | 115 |
| MS.gene38309.t1 | AT2G20180 | 29.047 | 451 | 233 | 16 | 1 | 434 | 1 | 381 | 2.09e-27 | 115 |
| MS.gene38309.t1 | AT2G20180 | 29.973 | 377 | 207 | 14 | 1 | 358 | 1 | 339 | 4.09e-26 | 109 |
| MS.gene38309.t1 | AT2G20180 | 35.165 | 273 | 123 | 9 | 173 | 438 | 89 | 314 | 4.36e-26 | 110 |
| MS.gene38309.t1 | AT2G20180 | 35.165 | 273 | 123 | 9 | 173 | 438 | 89 | 314 | 4.36e-26 | 110 |
| MS.gene38309.t1 | AT2G20180 | 35.165 | 273 | 123 | 9 | 173 | 438 | 89 | 314 | 4.36e-26 | 110 |
| MS.gene38309.t1 | AT4G28790 | 30.496 | 282 | 171 | 8 | 112 | 389 | 101 | 361 | 1.60e-25 | 108 |
| MS.gene38309.t1 | AT4G36930 | 56.471 | 85 | 34 | 1 | 303 | 384 | 197 | 281 | 1.22e-22 | 99.8 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT1G09530 | 45.082 | 122 | 57 | 1 | 270 | 391 | 310 | 421 | 1.65e-22 | 100 |
| MS.gene38309.t1 | AT5G67110 | 57.471 | 87 | 34 | 1 | 287 | 370 | 77 | 163 | 1.70e-22 | 95.9 |
| MS.gene38309.t1 | AT4G28790 | 33.333 | 189 | 109 | 4 | 168 | 356 | 159 | 330 | 2.79e-21 | 95.5 |
| MS.gene38309.t1 | AT5G61270 | 36.232 | 207 | 126 | 4 | 281 | 484 | 56 | 259 | 1.78e-20 | 91.7 |
| MS.gene38309.t1 | AT5G61270 | 36.232 | 207 | 126 | 4 | 281 | 484 | 56 | 259 | 1.78e-20 | 91.7 |
| MS.gene38309.t1 | AT5G61270 | 36.232 | 207 | 126 | 4 | 281 | 484 | 144 | 347 | 2.99e-20 | 92.8 |
| MS.gene38309.t1 | AT2G46970 | 35.838 | 173 | 94 | 6 | 267 | 431 | 162 | 325 | 3.89e-20 | 92.8 |
| MS.gene38309.t1 | AT2G46970 | 35.838 | 173 | 94 | 6 | 267 | 431 | 193 | 356 | 4.97e-20 | 92.8 |
| MS.gene38309.t1 | AT2G46970 | 35.838 | 173 | 94 | 6 | 267 | 431 | 171 | 334 | 5.44e-20 | 92.4 |
| MS.gene38309.t1 | AT4G28815 | 58.209 | 67 | 28 | 0 | 291 | 357 | 62 | 128 | 1.57e-19 | 88.2 |
| MS.gene38309.t1 | AT4G28815 | 58.209 | 67 | 28 | 0 | 291 | 357 | 138 | 204 | 6.37e-19 | 87.8 |
| MS.gene38309.t1 | AT4G28800 | 38.095 | 168 | 68 | 5 | 280 | 446 | 236 | 368 | 1.28e-18 | 88.6 |
| MS.gene38309.t1 | AT3G62090 | 40.136 | 147 | 76 | 5 | 293 | 431 | 161 | 303 | 2.54e-18 | 86.7 |
| MS.gene38309.t1 | AT3G62090 | 40.136 | 147 | 76 | 5 | 293 | 431 | 178 | 320 | 2.69e-18 | 87.0 |
| MS.gene38309.t1 | AT4G28800 | 36.905 | 168 | 64 | 5 | 280 | 446 | 248 | 374 | 1.06e-17 | 85.9 |
| MS.gene38309.t1 | AT5G58010 | 52.941 | 68 | 32 | 0 | 293 | 360 | 95 | 162 | 3.81e-16 | 79.3 |
| MS.gene38309.t1 | AT2G24260 | 50.746 | 67 | 33 | 0 | 294 | 360 | 32 | 98 | 7.54e-16 | 77.8 |
| MS.gene38309.t1 | AT4G28811 | 30.405 | 296 | 171 | 9 | 194 | 488 | 265 | 526 | 7.80e-16 | 80.5 |
| MS.gene38309.t1 | AT4G30980 | 53.731 | 67 | 31 | 0 | 294 | 360 | 127 | 193 | 9.31e-16 | 78.6 |
| MS.gene38309.t1 | AT2G24260 | 50.746 | 67 | 33 | 0 | 294 | 360 | 135 | 201 | 1.65e-15 | 78.2 |
| MS.gene38309.t1 | AT3G59060 | 42.748 | 131 | 56 | 2 | 269 | 380 | 222 | 352 | 1.90e-15 | 79.0 |
| MS.gene38309.t1 | AT3G59060 | 42.748 | 131 | 56 | 2 | 269 | 380 | 222 | 352 | 1.98e-15 | 79.0 |
| MS.gene38309.t1 | AT3G59060 | 42.748 | 131 | 56 | 2 | 269 | 380 | 222 | 352 | 1.98e-15 | 79.0 |
| MS.gene38309.t1 | AT3G59060 | 42.748 | 131 | 56 | 2 | 269 | 380 | 222 | 352 | 1.98e-15 | 79.0 |
| MS.gene38309.t1 | AT4G30980 | 53.731 | 67 | 31 | 0 | 294 | 360 | 175 | 241 | 2.45e-15 | 77.8 |
| MS.gene38309.t1 | AT2G43010 | 46.078 | 102 | 48 | 1 | 298 | 392 | 252 | 353 | 2.99e-15 | 78.2 |
| MS.gene38309.t1 | AT2G43010 | 46.078 | 102 | 48 | 1 | 298 | 392 | 252 | 353 | 3.13e-15 | 78.2 |
| MS.gene38309.t1 | AT2G43010 | 46.078 | 102 | 48 | 1 | 298 | 392 | 252 | 353 | 3.79e-15 | 77.8 |
| MS.gene38309.t1 | AT2G43010 | 46.078 | 102 | 48 | 1 | 298 | 392 | 259 | 360 | 4.89e-15 | 77.8 |
| MS.gene38309.t1 | AT2G43010 | 46.078 | 102 | 48 | 1 | 298 | 392 | 294 | 395 | 6.75e-15 | 77.4 |
| MS.gene38309.t1 | AT1G02340 | 40.741 | 81 | 47 | 1 | 311 | 390 | 134 | 214 | 1.53e-11 | 65.5 |
| MS.gene38309.t1 | AT1G02340 | 33.871 | 124 | 59 | 3 | 311 | 433 | 141 | 242 | 1.79e-11 | 65.5 |
| MS.gene38309.t1 | AT5G50915 | 50.000 | 64 | 31 | 1 | 297 | 359 | 136 | 199 | 3.70e-11 | 64.3 |
| MS.gene38309.t1 | AT5G50915 | 50.000 | 64 | 31 | 1 | 297 | 359 | 136 | 199 | 3.70e-11 | 64.3 |
| MS.gene38309.t1 | AT1G27740 | 55.319 | 47 | 21 | 0 | 313 | 359 | 183 | 229 | 4.12e-11 | 63.9 |
| MS.gene38309.t1 | AT5G50915 | 50.000 | 64 | 31 | 1 | 297 | 359 | 136 | 199 | 4.33e-11 | 64.3 |
| MS.gene38309.t1 | AT5G50915 | 50.000 | 64 | 31 | 1 | 297 | 359 | 136 | 199 | 4.33e-11 | 64.3 |
| MS.gene38309.t1 | AT2G14760 | 47.619 | 63 | 31 | 1 | 299 | 359 | 237 | 299 | 5.08e-11 | 64.3 |
| MS.gene38309.t1 | AT1G68920 | 28.972 | 214 | 122 | 7 | 167 | 359 | 161 | 365 | 5.55e-11 | 65.1 |
| MS.gene38309.t1 | AT4G33880 | 47.619 | 63 | 31 | 1 | 299 | 359 | 266 | 328 | 7.80e-11 | 63.9 |
Find 189 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATACCTTGCTGGAATT+TGG | 0.116447 | 7.3:-58017128 | None:intergenic |
| CTCGCTGGTGGTGGTGTTTA+TGG | 0.210112 | 7.3:+58014726 | MS.gene38309:CDS |
| GATACGTACGATAGGGAATT+TGG | 0.237818 | 7.3:+58015104 | MS.gene38309:CDS |
| TTCAACTTCAATAGCTTCTA+TGG | 0.248590 | 7.3:+58015142 | MS.gene38309:CDS |
| CTAATACCTTGCTGGAATTT+GGG | 0.269938 | 7.3:-58017127 | None:intergenic |
| ATCCAACATTGAAGCTTTAT+CGG | 0.300002 | 7.3:-58020168 | None:intergenic |
| AATCATCAGTGTCCACTAAA+AGG | 0.320838 | 7.3:+58016916 | MS.gene38309:CDS |
| AATCCAATGGGCATGGGAAT+GGG | 0.328179 | 7.3:+58020308 | MS.gene38309:CDS |
| GGGTCAGCCATCCCGGCTGC+TGG | 0.329557 | 7.3:-58020500 | None:intergenic |
| ATTGCAAGCACAAGTGAATA+TGG | 0.338807 | 7.3:+58020214 | MS.gene38309:CDS |
| TTTGCAATGTCTTCATTCTC+TGG | 0.342653 | 7.3:-58017097 | None:intergenic |
| CCAATGGGAATGGCCGGAAT+GGG | 0.350269 | 7.3:+58020332 | MS.gene38309:CDS |
| AGGGTTAGTTGAATTAGAAT+TGG | 0.352630 | 7.3:-58014155 | None:intergenic |
| GCAGAATTGACATGGGAAAA+TGG | 0.354104 | 7.3:+58014534 | MS.gene38309:CDS |
| CAAATTTCTATGCATGGCTT+AGG | 0.354297 | 7.3:+58014558 | MS.gene38309:CDS |
| CACACGTGGCGGGGAGTGGC+AGG | 0.362431 | 7.3:+58015024 | MS.gene38309:CDS |
| GTGGCACACGTGGCGGGGAG+TGG | 0.363770 | 7.3:+58015020 | MS.gene38309:CDS |
| GGATGTTTATACGGCACTTT+CGG | 0.364126 | 7.3:-58014585 | None:intergenic |
| CATGATCCAATCCCTGATCT+AGG | 0.366172 | 7.3:-58014894 | None:intergenic |
| GGAGGGTGGCACACGTGGCG+GGG | 0.367653 | 7.3:+58015015 | MS.gene38309:CDS |
| TCCCATACCCATCCCCATTC+CGG | 0.371497 | 7.3:-58020345 | None:intergenic |
| GGGAGGGTGGCACACGTGGC+GGG | 0.375369 | 7.3:+58015014 | MS.gene38309:CDS |
| TATATTCTCTAATACCTTGC+TGG | 0.384413 | 7.3:-58017135 | None:intergenic |
| GCGGTTGATGGATGTTTATA+CGG | 0.384417 | 7.3:-58014594 | None:intergenic |
| GGCGGCTGTGGCAGCTGCGA+TGG | 0.385766 | 7.3:-58014790 | None:intergenic |
| TCTCTGCTCCTTAGTAGTAT+TGG | 0.406917 | 7.3:-58014850 | None:intergenic |
| GATGTTTATTTACCTGTGAT+TGG | 0.409539 | 7.3:-58020544 | None:intergenic |
| TGGGAGGGTGGCACACGTGG+CGG | 0.410223 | 7.3:+58015013 | MS.gene38309:CDS |
| TGGAGAACCGGAGGCATCCC+AGG | 0.410929 | 7.3:-58020413 | None:intergenic |
| ACGTATCAAGTGTCACTTGC+TGG | 0.412295 | 7.3:-58015088 | None:intergenic |
| TTGCACTGCCACTCATACTT+TGG | 0.415885 | 7.3:-58015049 | None:intergenic |
| TATGGGAATGGGCATGGGAA+TGG | 0.417658 | 7.3:+58020361 | MS.gene38309:CDS |
| ATGAGTGGCAGTGCAACCTT+TGG | 0.418201 | 7.3:+58015056 | MS.gene38309:CDS |
| GCCAATGGGAATGGCCGGAA+TGG | 0.418467 | 7.3:+58020331 | MS.gene38309:CDS |
| GGCCGGAATGGGGATGGGTA+TGG | 0.418753 | 7.3:+58020343 | MS.gene38309:CDS |
| CAATTCTTTGAACCTGGTGC+TGG | 0.423938 | 7.3:-58021486 | None:intergenic |
| CATGCCGTTGTTGGCGGCTG+TGG | 0.424655 | 7.3:-58014802 | None:intergenic |
| TGCTGTCGTGGCTGCAACGC+AGG | 0.424858 | 7.3:+58014953 | MS.gene38309:CDS |
| GGGCATGGGAATGGGGCCAA+TGG | 0.424993 | 7.3:+58020316 | MS.gene38309:CDS |
| TTGTTGCATCTGCTGATACA+TGG | 0.426756 | 7.3:-58021457 | None:intergenic |
| CAATGGGAATGGCCGGAATG+GGG | 0.435164 | 7.3:+58020333 | MS.gene38309:CDS |
| AGGGATGTTAACGCGATTCA+TGG | 0.435719 | 7.3:-58020393 | None:intergenic |
| GAATCCAATGGGCATGGGAA+TGG | 0.435727 | 7.3:+58020307 | MS.gene38309:CDS |
| ATGGGGATGGGTATGGGAAT+GGG | 0.437973 | 7.3:+58020350 | MS.gene38309:CDS |
| CATTCATGCCTATGCCTTCG+TGG | 0.438570 | 7.3:+58020444 | MS.gene38309:CDS |
| ACTGATCTTGGAGGTGGTTG+TGG | 0.440551 | 7.3:-58014121 | None:intergenic |
| CACCGCCATGCCGTTGTTGG+CGG | 0.441882 | 7.3:-58014808 | None:intergenic |
| ATCCACCGCCATGCCGTTGT+TGG | 0.442498 | 7.3:-58014811 | None:intergenic |
| ATGGATCCAGTCCCTAGATC+AGG | 0.446722 | 7.3:+58014882 | MS.gene38309:CDS |
| GATGGGTATGGGAATGGGCA+TGG | 0.448682 | 7.3:+58020355 | MS.gene38309:CDS |
| TGGGAAAAGCCTCGTGGTAG+TGG | 0.449161 | 7.3:+58014642 | MS.gene38309:CDS |
| GGTGCACTGTTTCTCAGAGC+TGG | 0.453141 | 7.3:-58015171 | None:intergenic |
| CCCATTCCGGCCATTCCCAT+TGG | 0.453787 | 7.3:-58020332 | None:intergenic |
| AATGCAGATGGGTGGAGAAC+CGG | 0.455967 | 7.3:-58020425 | None:intergenic |
| CGTCAGCGGCAAAGCGTGGG+AGG | 0.457321 | 7.3:+58014997 | MS.gene38309:CDS |
| GGGAATGGCCGGAATGGGGA+TGG | 0.458260 | 7.3:+58020337 | MS.gene38309:CDS |
| AATGGGGATGGGTATGGGAA+TGG | 0.459338 | 7.3:+58020349 | MS.gene38309:CDS |
| ATCGTCTACGGTGGTTGTCC+TGG | 0.460526 | 7.3:-58015192 | None:intergenic |
| ACACCACCACCAGCGAGAAA+TGG | 0.461889 | 7.3:-58014720 | None:intergenic |
| CGATGGCTGCAGCACGTTGT+GGG | 0.463058 | 7.3:-58014773 | None:intergenic |
| ATGGGTATGGGAATGGGCAT+GGG | 0.465057 | 7.3:+58020356 | MS.gene38309:CDS |
| CTTCAAGGACCTCCAGCAGC+CGG | 0.466012 | 7.3:+58020488 | MS.gene38309:CDS |
| GGGAATGGGGCCAATGGGAA+TGG | 0.466616 | 7.3:+58020322 | MS.gene38309:CDS |
| GGCCCCATTCCCATGCCCAT+TGG | 0.468409 | 7.3:-58020311 | None:intergenic |
| TGAGCCAGTGTGTTCCTAGT+TGG | 0.468451 | 7.3:+58014083 | MS.gene38309:CDS |
| AAATTTCTATGCATGGCTTA+GGG | 0.469175 | 7.3:+58014559 | MS.gene38309:CDS |
| GAACGAAGAGAGACTGATCT+TGG | 0.469694 | 7.3:-58014133 | None:intergenic |
| GCTGCGTCAGCGGCAAAGCG+TGG | 0.471868 | 7.3:+58014993 | MS.gene38309:CDS |
| GGTGTTGTACCTGCGGTTGA+TGG | 0.477521 | 7.3:-58014606 | None:intergenic |
| CGCCAACAACGGCATGGCGG+TGG | 0.477769 | 7.3:+58014809 | MS.gene38309:CDS |
| TTCTTTGAACCTGGTGCTGG+AGG | 0.477841 | 7.3:-58021483 | None:intergenic |
| ATGGGGCCAATGGGAATGGC+CGG | 0.479464 | 7.3:+58020326 | MS.gene38309:CDS |
| AATGAAGACATTGCAAAAGT+TGG | 0.480140 | 7.3:+58017103 | MS.gene38309:CDS |
| GGTGGTGGTGACCGACTTCA+AGG | 0.482403 | 7.3:+58020473 | MS.gene38309:CDS |
| GCTCACTTACCCTTTCAGAT+TGG | 0.484516 | 7.3:-58016962 | None:intergenic |
| GCCGGAATGGGGATGGGTAT+GGG | 0.484859 | 7.3:+58020344 | MS.gene38309:CDS |
| GATAGGGAATTTGGTATGAC+TGG | 0.488691 | 7.3:+58015113 | MS.gene38309:CDS |
| GGCATGGGAATGGGGCCAAT+GGG | 0.488847 | 7.3:+58020317 | MS.gene38309:CDS |
| GCACGTTGTGGGTCAAGCCA+TGG | 0.490368 | 7.3:-58014762 | None:intergenic |
| CTCCTTAGTAGTATTGGAGC+AGG | 0.491917 | 7.3:-58014844 | None:intergenic |
| ATGAATCGCGTTAACATCCC+TGG | 0.495403 | 7.3:+58020395 | MS.gene38309:CDS |
| TGACCATGGATGCTTATAGT+AGG | 0.495601 | 7.3:+58021427 | MS.gene38309:CDS |
| CCTATGCCTTCGTGGGATGC+CGG | 0.500355 | 7.3:+58020452 | MS.gene38309:CDS |
| CGCAGGTACAACACCTTCCA+AGG | 0.500491 | 7.3:+58014614 | MS.gene38309:CDS |
| CTGCGTCAGCGGCAAAGCGT+GGG | 0.500962 | 7.3:+58014994 | MS.gene38309:CDS |
| AATGGACAAATTTCTATGCA+TGG | 0.502362 | 7.3:+58014552 | MS.gene38309:CDS |
| GCGTGGGAGGGTGGCACACG+TGG | 0.503424 | 7.3:+58015010 | MS.gene38309:CDS |
| CAACACCTTCCAAGGAAACA+TGG | 0.504499 | 7.3:+58014622 | MS.gene38309:CDS |
| GGTTGGCGGCCACACACCTG+TGG | 0.504726 | 7.3:+58014920 | MS.gene38309:CDS |
| TTGAAGTCGGTCACCACCAC+CGG | 0.507200 | 7.3:-58020471 | None:intergenic |
| GCCTCGTGGTAGTGGGACCT+TGG | 0.508052 | 7.3:+58014650 | MS.gene38309:CDS |
| ATCCAATGGGCATGGGAATG+GGG | 0.511377 | 7.3:+58020309 | MS.gene38309:CDS |
| CCTTCGTGGGATGCCGGTGG+TGG | 0.512954 | 7.3:+58020458 | MS.gene38309:CDS |
| GCGATGGCTGCAGCACGTTG+TGG | 0.514164 | 7.3:-58014774 | None:intergenic |
| CACGTTGTGGGTCAAGCCAT+GGG | 0.517113 | 7.3:-58014761 | None:intergenic |
| GAGCCAGTGTGTTCCTAGTT+GGG | 0.517262 | 7.3:+58014084 | MS.gene38309:CDS |
| TTCAAGGACCTCCAGCAGCC+GGG | 0.524548 | 7.3:+58020489 | MS.gene38309:CDS |
| ACTATAAGCATCCATGGTCA+TGG | 0.525290 | 7.3:-58021424 | None:intergenic |
| CGGCATGGCGGTGGATGCGT+TGG | 0.525524 | 7.3:+58014818 | MS.gene38309:CDS |
| ATGGAAACATGTTAGTCCCA+TGG | 0.525747 | 7.3:+58014745 | MS.gene38309:CDS |
| TAACATCCCTGGGATGCCTC+CGG | 0.526173 | 7.3:+58020406 | MS.gene38309:CDS |
| ACACGTGGCGGGGAGTGGCA+GGG | 0.528731 | 7.3:+58015025 | MS.gene38309:CDS |
| CCAATCCCTGATCTAGGGAC+TGG | 0.531824 | 7.3:-58014888 | None:intergenic |
| CTGCTGGAGGTCCTTGAAGT+CGG | 0.531831 | 7.3:-58020484 | None:intergenic |
| TCAGCCATCCCGGCTGCTGG+AGG | 0.532504 | 7.3:-58020497 | None:intergenic |
| GGCATAGGCATGAATGCAGA+TGG | 0.533264 | 7.3:-58020437 | None:intergenic |
| AGGACCTCCAGCAGCCGGGA+TGG | 0.533912 | 7.3:+58020493 | MS.gene38309:CDS |
| AGGCGTCCTTGCTGCGTCAG+CGG | 0.534040 | 7.3:+58014983 | MS.gene38309:CDS |
| GCTGCCACAGCCGCCAACAA+CGG | 0.534387 | 7.3:+58014798 | MS.gene38309:CDS |
| GGAATGGCCGGAATGGGGAT+GGG | 0.536484 | 7.3:+58020338 | MS.gene38309:CDS |
| CCAGTCCCTAGATCAGGGAT+TGG | 0.536661 | 7.3:+58014888 | MS.gene38309:CDS |
| CATTGTCATCGGCATCATCA+TGG | 0.537813 | 7.3:-58020258 | None:intergenic |
| TGAGTGGCAGTGCAACCTTT+GGG | 0.538614 | 7.3:+58015057 | MS.gene38309:CDS |
| TCACCATTTCTCGCTGGTGG+TGG | 0.540423 | 7.3:+58014717 | MS.gene38309:CDS |
| TCCGCGGTGCGGAAAGCTAG+TGG | 0.545630 | 7.3:-58014691 | None:intergenic |
| GGGATTGGATCATGCATGGT+TGG | 0.546571 | 7.3:+58014903 | MS.gene38309:CDS |
| TCCCTGCTCCAATACTACTA+AGG | 0.550539 | 7.3:+58014842 | MS.gene38309:CDS |
| AATACACAACCAATCTGAAA+GGG | 0.552633 | 7.3:+58016953 | MS.gene38309:CDS |
| ATTTGAATTTCAGAAAAGGA+GGG | 0.552789 | 7.3:+58017064 | MS.gene38309:intron |
| AGCGGCAAAGCGTGGGAGGG+TGG | 0.553726 | 7.3:+58015001 | MS.gene38309:CDS |
| AACAGAATCATGATCGTCTA+CGG | 0.554311 | 7.3:-58015204 | None:intergenic |
| ATTGGATCATGCATGGTTGG+CGG | 0.555215 | 7.3:+58014906 | MS.gene38309:CDS |
| CAACAACAACCTCCAGCACC+AGG | 0.555591 | 7.3:+58021474 | MS.gene38309:CDS |
| TAGGGACTGGATCCATTGCA+TGG | 0.557029 | 7.3:-58014875 | None:intergenic |
| ATGTCGATGATGAATCCAAT+GGG | 0.557625 | 7.3:+58020296 | MS.gene38309:CDS |
| GACCGATAAAGCTTCAATGT+TGG | 0.557873 | 7.3:+58020166 | MS.gene38309:intron |
| TTGCTGGCTCTGCCTCCCAA+AGG | 0.562082 | 7.3:-58015072 | None:intergenic |
| GGTGCGGAAAGCTAGTGGCT+TGG | 0.564273 | 7.3:-58014686 | None:intergenic |
| CTATAAGCATCCATGGTCAT+GGG | 0.569472 | 7.3:-58021423 | None:intergenic |
| TGACACTTGATACGTACGAT+AGG | 0.571959 | 7.3:+58015096 | MS.gene38309:CDS |
| CGAAGAGAGACTGATCTTGG+AGG | 0.573312 | 7.3:-58014130 | None:intergenic |
| CCGGCATCCCACGAAGGCAT+AGG | 0.573622 | 7.3:-58020452 | None:intergenic |
| CACAGCCGCCAACAACGGCA+TGG | 0.574856 | 7.3:+58014803 | MS.gene38309:CDS |
| GGAGAACCGGAGGCATCCCA+GGG | 0.575931 | 7.3:-58020412 | None:intergenic |
| ACAGATCAATTCTTTGAACC+TGG | 0.576343 | 7.3:-58021492 | None:intergenic |
| TATTTGAATTTCAGAAAAGG+AGG | 0.576885 | 7.3:+58017063 | MS.gene38309:intron |
| GGGATCTTGCAGTGCTGTCG+TGG | 0.578008 | 7.3:+58014941 | MS.gene38309:CDS |
| ATGATCCAATCCCTGATCTA+GGG | 0.578354 | 7.3:-58014893 | None:intergenic |
| AGTTGTTGTTGCATTGTCAT+CGG | 0.578530 | 7.3:-58020269 | None:intergenic |
| GACACTTGATACGTACGATA+GGG | 0.579795 | 7.3:+58015097 | MS.gene38309:CDS |
| TAAAGCTTCAATGTTGGATG+AGG | 0.582737 | 7.3:+58020172 | MS.gene38309:CDS |
| AGAGAGACTGATCTTGGAGG+TGG | 0.583200 | 7.3:-58014127 | None:intergenic |
| TGCAAGATCCCACAGGTGTG+TGG | 0.585225 | 7.3:-58014929 | None:intergenic |
| AATGTCGATGATGAATCCAA+TGG | 0.587525 | 7.3:+58020295 | MS.gene38309:CDS |
| GCTCTGAGAAACAGTGCACC+AGG | 0.588338 | 7.3:+58015174 | MS.gene38309:CDS |
| AATCCTACTATAAGCATCCA+TGG | 0.589299 | 7.3:-58021430 | None:intergenic |
| GGGAAAAGCCTCGTGGTAGT+GGG | 0.593722 | 7.3:+58014643 | MS.gene38309:CDS |
| TTGGTTCACTATAGACTCCA+AGG | 0.593852 | 7.3:-58014667 | None:intergenic |
| TGAATCGCGTTAACATCCCT+GGG | 0.595225 | 7.3:+58020396 | MS.gene38309:CDS |
| GCTTTGCCGCTGACGCAGCA+AGG | 0.596395 | 7.3:-58014989 | None:intergenic |
| GATGATGAATCCAATGGGCA+TGG | 0.598687 | 7.3:+58020301 | MS.gene38309:CDS |
| CAATACACAACCAATCTGAA+AGG | 0.601190 | 7.3:+58016952 | MS.gene38309:CDS |
| GGAAAATCACCATTTCTCGC+TGG | 0.601319 | 7.3:+58014711 | MS.gene38309:CDS |
| ATGATGAATCCAATGGGCAT+GGG | 0.601337 | 7.3:+58020302 | MS.gene38309:CDS |
| AAATCACCATTTCTCGCTGG+TGG | 0.608017 | 7.3:+58014714 | MS.gene38309:CDS |
| TGTTTGTCACAGTAGACCAC+CGG | 0.608502 | 7.3:+58015223 | MS.gene38309:CDS |
| ATCAGGGATTGGATCATGCA+TGG | 0.608506 | 7.3:+58014899 | MS.gene38309:CDS |
| ATTCATGCCTATGCCTTCGT+GGG | 0.610276 | 7.3:+58020445 | MS.gene38309:CDS |
| TGGATCCAGTCCCTAGATCA+GGG | 0.617422 | 7.3:+58014883 | MS.gene38309:CDS |
| AGGGACTGGATCCATTGCAT+GGG | 0.619973 | 7.3:-58014874 | None:intergenic |
| GCTGCAACGCAGGACGAAGG+AGG | 0.620227 | 7.3:+58014963 | MS.gene38309:CDS |
| GTCAGCGGCAAAGCGTGGGA+GGG | 0.620551 | 7.3:+58014998 | MS.gene38309:CDS |
| AACACCTTCCAAGGAAACAT+GGG | 0.622242 | 7.3:+58014623 | MS.gene38309:CDS |
| GGCAGGGACCAAAGTATGAG+TGG | 0.622617 | 7.3:+58015041 | MS.gene38309:CDS |
| GTGGCTGCAACGCAGGACGA+AGG | 0.623187 | 7.3:+58014960 | MS.gene38309:CDS |
| GTTGGCGGCCACACACCTGT+GGG | 0.625793 | 7.3:+58014921 | MS.gene38309:CDS |
| GCTGACATGGGAACATCATG+AGG | 0.626938 | 7.3:-58014175 | None:intergenic |
| GGAGCAGAGAACCCATGCAA+TGG | 0.627174 | 7.3:+58014863 | MS.gene38309:CDS |
| ATAGAGGGAGGAAGCTGACG+TGG | 0.633549 | 7.3:+58016869 | MS.gene38309:intron |
| ATGCCTTCGTGGGATGCCGG+TGG | 0.634760 | 7.3:+58020455 | MS.gene38309:CDS |
| ATGATGTTGCAGAATTGACA+TGG | 0.641179 | 7.3:+58014526 | MS.gene38309:CDS |
| ACAGCACTGCAAGATCCCAC+AGG | 0.641870 | 7.3:-58014936 | None:intergenic |
| TATAAACATCCATCAACCGC+AGG | 0.646938 | 7.3:+58014597 | MS.gene38309:CDS |
| TAGGCATGAATGCAGATGGG+TGG | 0.647258 | 7.3:-58020433 | None:intergenic |
| GCATAGGCATGAATGCAGAT+GGG | 0.648584 | 7.3:-58020436 | None:intergenic |
| CTGACATGGGAACATCATGA+GGG | 0.655129 | 7.3:-58014174 | None:intergenic |
| GCAGATGGGTGGAGAACCGG+AGG | 0.655471 | 7.3:-58020422 | None:intergenic |
| TCCTTAGTAGTATTGGAGCA+GGG | 0.655762 | 7.3:-58014843 | None:intergenic |
| CTTGGAAGGTGTTGTACCTG+CGG | 0.658125 | 7.3:-58014613 | None:intergenic |
| GCCACTAGCTTTCCGCACCG+CGG | 0.661460 | 7.3:+58014690 | MS.gene38309:CDS |
| GTGGCAGTGCAACCTTTGGG+AGG | 0.676643 | 7.3:+58015060 | MS.gene38309:CDS |
| GTTGGTCCCAAATTCCAGCA+AGG | 0.680499 | 7.3:+58017121 | MS.gene38309:CDS |
| CCACCACCGGCATCCCACGA+AGG | 0.687100 | 7.3:-58020458 | None:intergenic |
| CATCCCAACTAGGAACACAC+TGG | 0.691416 | 7.3:-58014087 | None:intergenic |
| AGCCGCCAACAACGGCATGG+CGG | 0.704952 | 7.3:+58014806 | MS.gene38309:CDS |
| AGAATCATGATCGTCTACGG+TGG | 0.711312 | 7.3:-58015201 | None:intergenic |
| TCCAAGGTCCCACTACCACG+AGG | 0.721374 | 7.3:-58014651 | None:intergenic |
| TGATGTTGCAGAATTGACAT+GGG | 0.723669 | 7.3:+58014527 | MS.gene38309:CDS |
| GAAACATGGGAAAAGCCTCG+TGG | 0.735368 | 7.3:+58014636 | MS.gene38309:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 58014082 | 58021509 | 58014082 | ID=MS.gene38309 |
| chr7.3 | mRNA | 58014082 | 58021509 | 58014082 | ID=MS.gene38309.t1;Parent=MS.gene38309 |
| chr7.3 | exon | 58014082 | 58014191 | 58014082 | ID=MS.gene38309.t1.exon1;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58014082 | 58014191 | 58014082 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| chr7.3 | exon | 58014518 | 58015244 | 58014518 | ID=MS.gene38309.t1.exon2;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58014518 | 58015244 | 58014518 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| chr7.3 | exon | 58016873 | 58016974 | 58016873 | ID=MS.gene38309.t1.exon3;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58016873 | 58016974 | 58016873 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| chr7.3 | exon | 58017077 | 58017142 | 58017077 | ID=MS.gene38309.t1.exon4;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58017077 | 58017142 | 58017077 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| chr7.3 | exon | 58020167 | 58020553 | 58020167 | ID=MS.gene38309.t1.exon5;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58020167 | 58020553 | 58020167 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| chr7.3 | exon | 58021423 | 58021509 | 58021423 | ID=MS.gene38309.t1.exon6;Parent=MS.gene38309.t1 |
| chr7.3 | CDS | 58021423 | 58021509 | 58021423 | ID=cds.MS.gene38309.t1;Parent=MS.gene38309.t1 |
| Gene Sequence |
| Protein sequence |
