Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074598.t1 | XP_013457053.1 | 89.5 | 152 | 16 | 0 | 7 | 158 | 1 | 152 | 1.20E-68 | 269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074598.t1 | P73625 | 36.8 | 106 | 62 | 3 | 39 | 141 | 8 | 111 | 4.3e-06 | 52.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074598.t1 | G7ZZ93 | 89.5 | 152 | 16 | 0 | 7 | 158 | 1 | 152 | 8.7e-69 | 269.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene074598 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene074598 | 0.902866 | 6.26E-79 | -1.69E-46 |
| MS.gene049173 | MS.gene074598 | 0.82003 | 8.51E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene074598 | 0.862747 | 4.07E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene074598 | 0.908183 | 2.26E-81 | -1.69E-46 |
| MS.gene049232 | MS.gene074598 | 0.886097 | 4.60E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene074598 | 0.905927 | 2.56E-80 | -1.69E-46 |
| MS.gene049320 | MS.gene074598 | 0.900291 | 8.49E-78 | -1.69E-46 |
| MS.gene049609 | MS.gene074598 | 0.85236 | 4.86E-61 | -1.69E-46 |
| MS.gene049627 | MS.gene074598 | 0.854811 | 9.60E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene074598 | 0.875457 | 3.04E-68 | -1.69E-46 |
| MS.gene049656 | MS.gene074598 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene074598 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene074598 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene049865 | MS.gene074598 | 0.857686 | 1.38E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene074598 | 0.877975 | 4.08E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene074598 | 0.867822 | 1.03E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene074598 | 0.869975 | 2.07E-66 | -1.69E-46 |
| MS.gene050170 | MS.gene074598 | 0.889844 | 1.68E-73 | -1.69E-46 |
| MS.gene050216 | MS.gene074598 | 0.834289 | 3.27E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene074598 | 0.890114 | 1.32E-73 | -1.69E-46 |
| MS.gene050333 | MS.gene074598 | 0.863953 | 1.72E-64 | -1.69E-46 |
| MS.gene050381 | MS.gene074598 | -0.846439 | 2.17E-59 | -1.69E-46 |
| MS.gene050444 | MS.gene074598 | 0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene074598 | 0.87162 | 5.95E-67 | -1.69E-46 |
| MS.gene050502 | MS.gene074598 | 0.807218 | 5.63E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene074598 | 0.909902 | 3.41E-82 | -1.69E-46 |
| MS.gene050518 | MS.gene074598 | 0.900258 | 8.77E-78 | -1.69E-46 |
| MS.gene050538 | MS.gene074598 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene074598 | 0.922339 | 1.12E-88 | -1.69E-46 |
| MS.gene050593 | MS.gene074598 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene074598 | 0.896864 | 2.45E-76 | -1.69E-46 |
| MS.gene050662 | MS.gene074598 | 0.800865 | 1.18E-48 | -1.69E-46 |
| MS.gene050675 | MS.gene074598 | 0.869468 | 3.03E-66 | -1.69E-46 |
| MS.gene050699 | MS.gene074598 | 0.886492 | 3.26E-72 | -1.69E-46 |
| MS.gene050747 | MS.gene074598 | 0.868374 | 6.85E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene074598 | 0.873452 | 1.45E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene074598 | 0.873967 | 9.75E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene074598 | 0.808121 | 3.62E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene074598 | 0.890365 | 1.05E-73 | -1.69E-46 |
| MS.gene050871 | MS.gene074598 | 0.888413 | 6.04E-73 | -1.69E-46 |
| MS.gene050876 | MS.gene074598 | 0.844246 | 8.51E-59 | -1.69E-46 |
| MS.gene05087 | MS.gene074598 | 0.81843 | 1.97E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene074598 | -0.848699 | 5.19E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene074598 | 0.894861 | 1.66E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene074598 | 0.864935 | 8.50E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene074598 | 0.891246 | 4.73E-74 | -1.69E-46 |
| MS.gene05100 | MS.gene074598 | 0.856881 | 2.38E-62 | -1.69E-46 |
| MS.gene051127 | MS.gene074598 | -0.826609 | 2.47E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene074598 | -0.812404 | 4.31E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene074598 | 0.844683 | 6.50E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene074598 | 0.866582 | 2.57E-65 | -1.69E-46 |
| MS.gene051364 | MS.gene074598 | -0.816478 | 5.42E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene074598 | 0.814595 | 1.42E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene074598 | 0.861313 | 1.12E-63 | -1.69E-46 |
| MS.gene051560 | MS.gene074598 | 0.835428 | 1.69E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene074598 | -0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene074598 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene074598 | 0.824052 | 9.94E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene074598 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene051810 | MS.gene074598 | 0.823723 | 1.19E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene074598 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene074598 | 0.82662 | 2.46E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene074598 | 0.808914 | 2.45E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene074598 | -0.827346 | 1.65E-54 | -1.69E-46 |
| MS.gene052066 | MS.gene074598 | 0.82233 | 2.51E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene074598 | 0.906077 | 2.18E-80 | -1.69E-46 |
| MS.gene052271 | MS.gene074598 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene052482 | MS.gene074598 | 0.996288 | 1.18E-225 | -1.69E-46 |
| MS.gene052486 | MS.gene074598 | 0.988596 | 1.22E-174 | -1.69E-46 |
| MS.gene052494 | MS.gene074598 | -0.818372 | 2.03E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene074598 | 0.870553 | 1.34E-66 | -1.69E-46 |
| MS.gene052504 | MS.gene074598 | 0.807687 | 4.48E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene074598 | 0.837945 | 3.85E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene074598 | 0.823013 | 1.74E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene074598 | 0.801799 | 7.59E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene074598 | 0.837567 | 4.82E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene074598 | 0.868563 | 5.95E-66 | -1.69E-46 |
| MS.gene052825 | MS.gene074598 | 0.862782 | 3.97E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene074598 | 0.809737 | 1.63E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene074598 | 0.807239 | 5.57E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene074598 | 0.861918 | 7.32E-64 | -1.69E-46 |
| MS.gene052986 | MS.gene074598 | 0.804087 | 2.56E-49 | -1.69E-46 |
| MS.gene052987 | MS.gene074598 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene053083 | MS.gene074598 | -0.806857 | 6.71E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene074598 | 0.885928 | 5.32E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene074598 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene074598 | 0.874089 | 8.87E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene074598 | 0.875975 | 2.02E-68 | -1.69E-46 |
| MS.gene053420 | MS.gene074598 | -0.863454 | 2.46E-64 | -1.69E-46 |
| MS.gene053421 | MS.gene074598 | -0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene074598 | 0.868109 | 8.33E-66 | -1.69E-46 |
| MS.gene053479 | MS.gene074598 | 0.843406 | 1.43E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene074598 | 0.869598 | 2.75E-66 | -1.69E-46 |
| MS.gene053549 | MS.gene074598 | -0.83589 | 1.29E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene074598 | 0.886391 | 3.56E-72 | -1.69E-46 |
| MS.gene053626 | MS.gene074598 | 0.87235 | 3.40E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene074598 | 0.837883 | 4.00E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene074598 | 0.837066 | 6.47E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene074598 | 0.863779 | 1.95E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene074598 | 0.826314 | 2.90E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene074598 | 0.839141 | 1.89E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene074598 | 0.846087 | 2.71E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene074598 | 0.893314 | 7.05E-75 | -1.69E-46 |
| MS.gene054600 | MS.gene074598 | 0.862658 | 4.34E-64 | -1.69E-46 |
| MS.gene054616 | MS.gene074598 | -0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene074598 | 0.87546 | 3.03E-68 | -1.69E-46 |
| MS.gene054706 | MS.gene074598 | -0.823472 | 1.36E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene074598 | -0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene074598 | 0.906747 | 1.07E-80 | -1.69E-46 |
| MS.gene054927 | MS.gene074598 | 0.828116 | 1.08E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene074598 | 0.908225 | 2.16E-81 | -1.69E-46 |
| MS.gene055154 | MS.gene074598 | -0.852095 | 5.78E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene074598 | 0.824851 | 6.45E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene074598 | 0.801592 | 8.37E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene074598 | 0.897229 | 1.72E-76 | -1.69E-46 |
| MS.gene055502 | MS.gene074598 | 0.913952 | 3.38E-84 | -1.69E-46 |
| MS.gene055577 | MS.gene074598 | 0.883811 | 3.27E-71 | -1.69E-46 |
| MS.gene055634 | MS.gene074598 | 0.803931 | 2.75E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene074598 | 0.828724 | 7.67E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene074598 | 0.892429 | 1.60E-74 | -1.69E-46 |
| MS.gene055750 | MS.gene074598 | 0.904833 | 8.12E-80 | -1.69E-46 |
| MS.gene055751 | MS.gene074598 | 0.897782 | 1.01E-76 | -1.69E-46 |
| MS.gene055776 | MS.gene074598 | 0.85284 | 3.55E-61 | -1.69E-46 |
| MS.gene055849 | MS.gene074598 | 0.823759 | 1.17E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene074598 | 0.904549 | 1.09E-79 | -1.69E-46 |
| MS.gene055941 | MS.gene074598 | 0.848293 | 6.72E-60 | -1.69E-46 |
| MS.gene056040 | MS.gene074598 | 0.84815 | 7.36E-60 | -1.69E-46 |
| MS.gene056046 | MS.gene074598 | 0.835413 | 1.70E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene074598 | 0.837249 | 5.81E-57 | -1.69E-46 |
| MS.gene056310 | MS.gene074598 | -0.82186 | 3.23E-53 | -1.69E-46 |
| MS.gene056311 | MS.gene074598 | -0.833948 | 3.98E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene074598 | 0.837238 | 5.85E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene074598 | 0.818574 | 1.83E-52 | -1.69E-46 |
| MS.gene056409 | MS.gene074598 | 0.835964 | 1.23E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene074598 | 0.844872 | 5.78E-59 | -1.69E-46 |
| MS.gene056449 | MS.gene074598 | 0.816535 | 5.26E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene074598 | 0.869756 | 2.44E-66 | -1.69E-46 |
| MS.gene056504 | MS.gene074598 | 0.926183 | 6.66E-91 | -1.69E-46 |
| MS.gene056510 | MS.gene074598 | 0.901238 | 3.28E-78 | -1.69E-46 |
| MS.gene056549 | MS.gene074598 | 0.825119 | 5.58E-54 | -1.69E-46 |
| MS.gene056550 | MS.gene074598 | -0.831502 | 1.61E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene074598 | 0.840673 | 7.55E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene074598 | 0.902154 | 1.30E-78 | -1.69E-46 |
| MS.gene056692 | MS.gene074598 | 0.889571 | 2.15E-73 | -1.69E-46 |
| MS.gene056878 | MS.gene074598 | 0.838689 | 2.48E-57 | -1.69E-46 |
| MS.gene056898 | MS.gene074598 | 0.808154 | 3.56E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene074598 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene074598 | -0.830882 | 2.29E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene074598 | 0.828606 | 8.19E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene074598 | 0.813865 | 2.06E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene074598 | 0.838321 | 3.08E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene074598 | 0.839216 | 1.81E-57 | -1.69E-46 |
| MS.gene057831 | MS.gene074598 | 0.896669 | 2.95E-76 | -1.69E-46 |
| MS.gene057872 | MS.gene074598 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene074598 | 0.881695 | 1.94E-70 | -1.69E-46 |
| MS.gene058019 | MS.gene074598 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene058111 | MS.gene074598 | -0.835004 | 2.16E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene074598 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene074598 | 0.851463 | 8.73E-61 | -1.69E-46 |
| MS.gene058171 | MS.gene074598 | -0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene058173 | MS.gene074598 | -0.836004 | 1.21E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene074598 | -0.840711 | 7.38E-58 | -1.69E-46 |
| MS.gene058334 | MS.gene074598 | -0.854111 | 1.53E-61 | -1.69E-46 |
| MS.gene058335 | MS.gene074598 | 0.815374 | 9.55E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene074598 | 0.858868 | 6.13E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene074598 | 0.886679 | 2.77E-72 | -1.69E-46 |
| MS.gene058419 | MS.gene074598 | 0.907611 | 4.20E-81 | -1.69E-46 |
| MS.gene05841 | MS.gene074598 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene058494 | MS.gene074598 | -0.801223 | 9.96E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene074598 | 0.878447 | 2.79E-69 | -1.69E-46 |
| MS.gene058719 | MS.gene074598 | 0.846117 | 2.66E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene074598 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene074598 | 0.885216 | 9.84E-72 | -1.69E-46 |
| MS.gene058838 | MS.gene074598 | 0.856353 | 3.41E-62 | -1.69E-46 |
| MS.gene05883 | MS.gene074598 | 0.822448 | 2.36E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene074598 | 0.89446 | 2.42E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene074598 | 0.893289 | 7.22E-75 | -1.69E-46 |
| MS.gene05912 | MS.gene074598 | 0.839904 | 1.20E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene074598 | 0.844219 | 8.66E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene074598 | 0.814675 | 1.37E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene074598 | 0.83998 | 1.15E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene074598 | 0.847926 | 8.49E-60 | -1.69E-46 |
| MS.gene059526 | MS.gene074598 | -0.800475 | 1.42E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene074598 | 0.857598 | 1.46E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene074598 | 0.8933 | 7.15E-75 | -1.69E-46 |
| MS.gene059718 | MS.gene074598 | 0.886229 | 4.10E-72 | -1.69E-46 |
| MS.gene059756 | MS.gene074598 | 0.873804 | 1.11E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene074598 | 0.861809 | 7.90E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene074598 | 0.862635 | 4.41E-64 | -1.69E-46 |
| MS.gene059865 | MS.gene074598 | 0.902759 | 6.98E-79 | -1.69E-46 |
| MS.gene059902 | MS.gene074598 | 0.822506 | 2.28E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene074598 | 0.811661 | 6.26E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene074598 | 0.88136 | 2.56E-70 | -1.69E-46 |
| MS.gene060187 | MS.gene074598 | -0.805944 | 1.04E-49 | -1.69E-46 |
| MS.gene060295 | MS.gene074598 | 0.82365 | 1.24E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene074598 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene060526 | MS.gene074598 | 0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene060593 | MS.gene074598 | -0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene074598 | -0.868442 | 6.51E-66 | -1.69E-46 |
| MS.gene060703 | MS.gene074598 | 0.87558 | 2.75E-68 | -1.69E-46 |
| MS.gene060762 | MS.gene074598 | 0.896519 | 3.41E-76 | -1.69E-46 |
| MS.gene060778 | MS.gene074598 | 0.893582 | 5.50E-75 | -1.69E-46 |
| MS.gene06077 | MS.gene074598 | 0.934784 | 2.36E-96 | -1.69E-46 |
| MS.gene060823 | MS.gene074598 | -0.821902 | 3.15E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene074598 | 0.809053 | 2.29E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene074598 | 0.852937 | 3.33E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene074598 | 0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene074598 | 0.906771 | 1.04E-80 | -1.69E-46 |
| MS.gene061044 | MS.gene074598 | -0.827161 | 1.82E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene074598 | 0.861394 | 1.06E-63 | -1.69E-46 |
| MS.gene061171 | MS.gene074598 | 0.801691 | 7.99E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074598.t1 | MTR_4g088920 | 89.474 | 152 | 16 | 0 | 7 | 158 | 1 | 152 | 1.76e-92 | 287 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074598.t1 | AT1G65070 | 47.581 | 124 | 61 | 1 | 34 | 153 | 40 | 163 | 7.43e-29 | 111 |
| MS.gene074598.t1 | AT1G65070 | 47.581 | 124 | 61 | 1 | 34 | 153 | 40 | 163 | 7.56e-29 | 111 |
| MS.gene074598.t1 | AT1G65070 | 47.581 | 124 | 61 | 1 | 34 | 153 | 40 | 163 | 7.60e-29 | 111 |
| MS.gene074598.t1 | AT1G65070 | 47.581 | 124 | 61 | 1 | 34 | 153 | 40 | 163 | 8.65e-29 | 111 |
Find 46 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAACACTCGCTGCTTCC+AGG | 0.290821 | 4.3:+24160099 | MS.gene074598:CDS |
| ATTCTCTCCGTTGCTGTTTC+CGG | 0.310263 | 4.3:+24160041 | MS.gene074598:CDS |
| AGGTTTGATCGAGAAGCTTT+TGG | 0.334460 | 4.3:-24159956 | None:intergenic |
| AGGGATTGAGGGTTTGTTGA+TGG | 0.339868 | 4.3:-24159751 | None:intergenic |
| GGGATTGAGGGTTTGTTGAT+GGG | 0.370731 | 4.3:-24159750 | None:intergenic |
| AGCATTCACTTCCACTTCAA+TGG | 0.372505 | 4.3:+24159878 | MS.gene074598:CDS |
| AAGGAGAAGCGAGGGATTGA+GGG | 0.374390 | 4.3:-24159762 | None:intergenic |
| ACGGGCGTTGTTGGCGGCGG+AGG | 0.376941 | 4.3:-24159904 | None:intergenic |
| GAGTACGTCCGACGGGTAAA+CGG | 0.383430 | 4.3:-24159923 | None:intergenic |
| GAAGGAGAAGCGAGGGATTG+AGG | 0.404110 | 4.3:-24159763 | None:intergenic |
| CATTCACACAGGTTTGAACT+TGG | 0.408717 | 4.3:+24160164 | MS.gene074598:CDS |
| GACGGGTAAACGGGCGTTGT+TGG | 0.416611 | 4.3:-24159913 | None:intergenic |
| GTAGCAGAAGCAAGGTTTGA+AGG | 0.434423 | 4.3:-24159781 | None:intergenic |
| CTTCGAACGGTGCAAAGCTC+GGG | 0.437748 | 4.3:-24160080 | None:intergenic |
| TGCTGAGAGTTGCTTGCATA+TGG | 0.449310 | 4.3:-24159859 | None:intergenic |
| GCATTCACTTCCACTTCAAT+GGG | 0.457389 | 4.3:+24159879 | MS.gene074598:CDS |
| GGATTGAGGGTTTGTTGATG+GGG | 0.474954 | 4.3:-24159749 | None:intergenic |
| AGTACGTCCGACGGGTAAAC+GGG | 0.478043 | 4.3:-24159922 | None:intergenic |
| GGGTAAACGGGCGTTGTTGG+CGG | 0.478868 | 4.3:-24159910 | None:intergenic |
| TAAACGGGCGTTGTTGGCGG+CGG | 0.480719 | 4.3:-24159907 | None:intergenic |
| TCTTCGAACGGTGCAAAGCT+CGG | 0.496479 | 4.3:-24160081 | None:intergenic |
| GATGGGGATGAAGAGGTTGC+AGG | 0.501851 | 4.3:-24159733 | None:intergenic |
| GTTTGATAGTTTGAAACACT+TGG | 0.502558 | 4.3:+24160127 | MS.gene074598:CDS |
| CAAACTATCAAACAATTCCC+TGG | 0.528874 | 4.3:-24160117 | None:intergenic |
| GTTTGTTGATGGGGATGAAG+AGG | 0.545453 | 4.3:-24159740 | None:intergenic |
| GGATTGGACTGAGTTGGACT+CGG | 0.547239 | 4.3:-24159808 | None:intergenic |
| AAGGTTTGAAGGAGAAGCGA+GGG | 0.550811 | 4.3:-24159770 | None:intergenic |
| TTGTTGTTGAGGAATGAGTC+TGG | 0.550825 | 4.3:-24159985 | None:intergenic |
| GTCTGTTGGAGTACGTCCGA+CGG | 0.557543 | 4.3:-24159931 | None:intergenic |
| AAGAACACTCGCTGCTTCCA+GGG | 0.558472 | 4.3:+24160100 | MS.gene074598:CDS |
| AGGTTGCAGGTGAGTTGCAT+CGG | 0.562147 | 4.3:-24159720 | None:intergenic |
| TCTGTTGGAGTACGTCCGAC+GGG | 0.568179 | 4.3:-24159930 | None:intergenic |
| ATAGCCTCAAAACTCTCGAA+TGG | 0.578502 | 4.3:+24159832 | MS.gene074598:CDS |
| AGGAATGAGTCTGGCAGCGG+AGG | 0.579503 | 4.3:-24159976 | None:intergenic |
| GCTATCGGATTGGACTGAGT+TGG | 0.590319 | 4.3:-24159814 | None:intergenic |
| TTGAGGAATGAGTCTGGCAG+CGG | 0.591996 | 4.3:-24159979 | None:intergenic |
| GGCGGAGGAGCCCATTGAAG+TGG | 0.595273 | 4.3:-24159889 | None:intergenic |
| CTGTATCTAATCATTCACAC+AGG | 0.610846 | 4.3:+24160153 | MS.gene074598:CDS |
| GGGAATAGTCAACAATCTAC+CGG | 0.610891 | 4.3:-24160060 | None:intergenic |
| TCGGTTGAGTAGCAGAAGCA+AGG | 0.613416 | 4.3:-24159789 | None:intergenic |
| AACAACGCCCGTTTACCCGT+CGG | 0.621448 | 4.3:+24159915 | MS.gene074598:CDS |
| CAAGGTTTGAAGGAGAAGCG+AGG | 0.631968 | 4.3:-24159771 | None:intergenic |
| GAAAAGTCGAGTTGTTGTTG+AGG | 0.632731 | 4.3:-24159996 | None:intergenic |
| CAATCTACCGGAAACAGCAA+CGG | 0.634527 | 4.3:-24160048 | None:intergenic |
| AGCAGCGAGTGTTCTTCGAA+CGG | 0.642225 | 4.3:-24160093 | None:intergenic |
| GCAGGTGAGTTGCATCGGTG+TGG | 0.676745 | 4.3:-24159715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GTTTGATAGTTTGAAACACT+TGG | + | chr4.3:24160127-24160146 | MS.gene074598:CDS | 30.0% |
| CAAACTATCAAACAATTCCC+TGG | - | chr4.3:24160120-24160139 | None:intergenic | 35.0% | |
| CTGTATCTAATCATTCACAC+AGG | + | chr4.3:24160153-24160172 | MS.gene074598:CDS | 35.0% | |
| AGCATTCACTTCCACTTCAA+TGG | + | chr4.3:24159878-24159897 | MS.gene074598:CDS | 40.0% | |
| ATAGCCTCAAAACTCTCGAA+TGG | + | chr4.3:24159832-24159851 | MS.gene074598:CDS | 40.0% | |
| CATTCACACAGGTTTGAACT+TGG | + | chr4.3:24160164-24160183 | MS.gene074598:CDS | 40.0% | |
| GCATTCACTTCCACTTCAAT+GGG | + | chr4.3:24159879-24159898 | MS.gene074598:CDS | 40.0% | |
| GGGAATAGTCAACAATCTAC+CGG | - | chr4.3:24160063-24160082 | None:intergenic | 40.0% | |
| ! | AGGTTTGATCGAGAAGCTTT+TGG | - | chr4.3:24159959-24159978 | None:intergenic | 40.0% |
| ! | AGTTCCATTCGAGAGTTTTG+AGG | - | chr4.3:24159839-24159858 | None:intergenic | 40.0% |
| ! | CAACAACAACTCGACTTTTC+TGG | + | chr4.3:24159999-24160018 | MS.gene074598:CDS | 40.0% |
| ! | GAAAAGTCGAGTTGTTGTTG+AGG | - | chr4.3:24159999-24160018 | None:intergenic | 40.0% |
| ! | TTGTTGTTGAGGAATGAGTC+TGG | - | chr4.3:24159988-24160007 | None:intergenic | 40.0% |
| !!! | TTCGAGAGTTTTGAGGCTAT+CGG | - | chr4.3:24159832-24159851 | None:intergenic | 40.0% |
| AAGGTTTGAAGGAGAAGCGA+GGG | - | chr4.3:24159773-24159792 | None:intergenic | 45.0% | |
| CAATCTACCGGAAACAGCAA+CGG | - | chr4.3:24160051-24160070 | None:intergenic | 45.0% | |
| GTAGCAGAAGCAAGGTTTGA+AGG | - | chr4.3:24159784-24159803 | None:intergenic | 45.0% | |
| TGCTGAGAGTTGCTTGCATA+TGG | - | chr4.3:24159862-24159881 | None:intergenic | 45.0% | |
| ! | GTTTGTTGATGGGGATGAAG+AGG | - | chr4.3:24159743-24159762 | None:intergenic | 45.0% |
| !! | AGAAGCTTTTGGCTGTCTGT+TGG | - | chr4.3:24159948-24159967 | None:intergenic | 45.0% |
| !! | AGGGATTGAGGGTTTGTTGA+TGG | - | chr4.3:24159754-24159773 | None:intergenic | 45.0% |
| !! | ATTCTCTCCGTTGCTGTTTC+CGG | + | chr4.3:24160041-24160060 | MS.gene074598:CDS | 45.0% |
| !! | GGATTGAGGGTTTGTTGATG+GGG | - | chr4.3:24159752-24159771 | None:intergenic | 45.0% |
| !! | GGGATTGAGGGTTTGTTGAT+GGG | - | chr4.3:24159753-24159772 | None:intergenic | 45.0% |
| !!! | GAGTTTTGAGGCTATCGGAT+TGG | - | chr4.3:24159827-24159846 | None:intergenic | 45.0% |
| AAGAACACTCGCTGCTTCCA+GGG | + | chr4.3:24160100-24160119 | MS.gene074598:CDS | 50.0% | |
| AAGGAGAAGCGAGGGATTGA+GGG | - | chr4.3:24159765-24159784 | None:intergenic | 50.0% | |
| AGCAGCGAGTGTTCTTCGAA+CGG | - | chr4.3:24160096-24160115 | None:intergenic | 50.0% | |
| AGGTTGCAGGTGAGTTGCAT+CGG | - | chr4.3:24159723-24159742 | None:intergenic | 50.0% | |
| CAAGGTTTGAAGGAGAAGCG+AGG | - | chr4.3:24159774-24159793 | None:intergenic | 50.0% | |
| TCGGTTGAGTAGCAGAAGCA+AGG | - | chr4.3:24159792-24159811 | None:intergenic | 50.0% | |
| TCTTCGAACGGTGCAAAGCT+CGG | - | chr4.3:24160084-24160103 | None:intergenic | 50.0% | |
| TTGAGGAATGAGTCTGGCAG+CGG | - | chr4.3:24159982-24160001 | None:intergenic | 50.0% | |
| ! | GCTATCGGATTGGACTGAGT+TGG | - | chr4.3:24159817-24159836 | None:intergenic | 50.0% |
| ! | GGATTGGACTGAGTTGGACT+CGG | - | chr4.3:24159811-24159830 | None:intergenic | 50.0% |
| AACAACGCCCGTTTACCCGT+CGG | + | chr4.3:24159915-24159934 | MS.gene074598:CDS | 55.0% | |
| AGTACGTCCGACGGGTAAAC+GGG | - | chr4.3:24159925-24159944 | None:intergenic | 55.0% | |
| CTTCGAACGGTGCAAAGCTC+GGG | - | chr4.3:24160083-24160102 | None:intergenic | 55.0% | |
| GAAGAACACTCGCTGCTTCC+AGG | + | chr4.3:24160099-24160118 | MS.gene074598:CDS | 55.0% | |
| GAAGGAGAAGCGAGGGATTG+AGG | - | chr4.3:24159766-24159785 | None:intergenic | 55.0% | |
| GAGTACGTCCGACGGGTAAA+CGG | - | chr4.3:24159926-24159945 | None:intergenic | 55.0% | |
| GATGGGGATGAAGAGGTTGC+AGG | - | chr4.3:24159736-24159755 | None:intergenic | 55.0% | |
| GTCTGTTGGAGTACGTCCGA+CGG | - | chr4.3:24159934-24159953 | None:intergenic | 55.0% | |
| TCTGTTGGAGTACGTCCGAC+GGG | - | chr4.3:24159933-24159952 | None:intergenic | 55.0% | |
| AGGAATGAGTCTGGCAGCGG+AGG | - | chr4.3:24159979-24159998 | None:intergenic | 60.0% | |
| ! | GACGGGTAAACGGGCGTTGT+TGG | - | chr4.3:24159916-24159935 | None:intergenic | 60.0% |
| ! | GCAGGTGAGTTGCATCGGTG+TGG | - | chr4.3:24159718-24159737 | None:intergenic | 60.0% |
| ! | GGGTAAACGGGCGTTGTTGG+CGG | - | chr4.3:24159913-24159932 | None:intergenic | 60.0% |
| ! | TAAACGGGCGTTGTTGGCGG+CGG | - | chr4.3:24159910-24159929 | None:intergenic | 60.0% |
| GGCGGAGGAGCCCATTGAAG+TGG | - | chr4.3:24159892-24159911 | None:intergenic | 65.0% | |
| ! | ACGGGCGTTGTTGGCGGCGG+AGG | - | chr4.3:24159907-24159926 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 24159705 | 24160193 | 24159705 | ID=MS.gene074598 |
| chr4.3 | mRNA | 24159705 | 24160193 | 24159705 | ID=MS.gene074598.t1;Parent=MS.gene074598 |
| chr4.3 | exon | 24159705 | 24160193 | 24159705 | ID=MS.gene074598.t1.exon1;Parent=MS.gene074598.t1 |
| chr4.3 | CDS | 24159705 | 24160193 | 24159705 | ID=cds.MS.gene074598.t1;Parent=MS.gene074598.t1 |
| Gene Sequence |
| Protein sequence |
