Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69132.t1 | XP_013462106.1 | 89.9 | 456 | 43 | 1 | 1 | 456 | 101 | 553 | 2.90E-187 | 664.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69132.t1 | A0A072V389 | 89.9 | 456 | 43 | 1 | 1 | 456 | 101 | 553 | 2.1e-187 | 664.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene69132 | 0.825852 | 3.74E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene69132 | 0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene69132 | 0.866453 | 2.82E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene69132 | 0.888312 | 6.60E-73 | -1.69E-46 |
| MS.gene049285 | MS.gene69132 | 0.85673 | 2.64E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene69132 | 0.87278 | 2.44E-67 | -1.69E-46 |
| MS.gene049369 | MS.gene69132 | 0.815365 | 9.60E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene69132 | 0.860664 | 1.76E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene69132 | 0.85059 | 1.54E-60 | -1.69E-46 |
| MS.gene049611 | MS.gene69132 | -0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene69132 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene69132 | 0.859534 | 3.87E-63 | -1.69E-46 |
| MS.gene05010 | MS.gene69132 | 0.862191 | 6.04E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene69132 | 0.824369 | 8.38E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene69132 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene69132 | 0.838937 | 2.14E-57 | -1.69E-46 |
| MS.gene050216 | MS.gene69132 | 0.838402 | 2.94E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene69132 | 0.855739 | 5.15E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene69132 | 0.806495 | 8.00E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene69132 | -0.827267 | 1.72E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene69132 | -0.830236 | 3.29E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene69132 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene050499 | MS.gene69132 | 0.808446 | 3.09E-50 | -1.69E-46 |
| MS.gene050502 | MS.gene69132 | 0.839693 | 1.36E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene69132 | 0.878636 | 2.39E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene69132 | 0.83644 | 9.35E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene69132 | 0.854156 | 1.48E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene69132 | 0.831132 | 1.98E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene69132 | 0.839291 | 1.73E-57 | -1.69E-46 |
| MS.gene050662 | MS.gene69132 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene050675 | MS.gene69132 | 0.828957 | 6.73E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene69132 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene69132 | 0.823992 | 1.03E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene69132 | 0.872578 | 2.86E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene69132 | 0.862908 | 3.63E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene69132 | 0.825633 | 4.22E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene69132 | 0.881479 | 2.32E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene69132 | 0.885589 | 7.14E-72 | -1.69E-46 |
| MS.gene050883 | MS.gene69132 | -0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene69132 | 0.871223 | 8.05E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene69132 | 0.861019 | 1.38E-63 | -1.69E-46 |
| MS.gene05104 | MS.gene69132 | -0.826593 | 2.49E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene69132 | -0.806985 | 6.30E-50 | -1.69E-46 |
| MS.gene051167 | MS.gene69132 | -0.81281 | 3.51E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene69132 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene69132 | -0.801804 | 7.57E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene69132 | 0.864407 | 1.24E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene69132 | 0.855076 | 8.04E-62 | -1.69E-46 |
| MS.gene051560 | MS.gene69132 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene051692 | MS.gene69132 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene69132 | 0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene69132 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene69132 | 0.801926 | 7.15E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene69132 | 0.822659 | 2.10E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene69132 | 0.886466 | 3.34E-72 | -1.69E-46 |
| MS.gene05240 | MS.gene69132 | -0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene69132 | 0.835193 | 1.93E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene69132 | 0.845122 | 4.95E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene69132 | 0.844731 | 6.31E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene69132 | 0.833191 | 6.15E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene69132 | 0.879088 | 1.66E-69 | -1.69E-46 |
| MS.gene052504 | MS.gene69132 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene69132 | 0.833682 | 4.64E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene69132 | 0.830874 | 2.30E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene69132 | 0.853566 | 2.19E-61 | -1.69E-46 |
| MS.gene052822 | MS.gene69132 | 0.832345 | 9.97E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene69132 | 0.885626 | 6.92E-72 | -1.69E-46 |
| MS.gene052825 | MS.gene69132 | 0.873115 | 1.89E-67 | -1.69E-46 |
| MS.gene052916 | MS.gene69132 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene69132 | 0.83217 | 1.10E-55 | -1.69E-46 |
| MS.gene053018 | MS.gene69132 | 0.81909 | 1.39E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene69132 | 0.852632 | 4.06E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene69132 | 0.817455 | 3.27E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene69132 | 0.880966 | 3.55E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene69132 | 0.88087 | 3.84E-70 | -1.69E-46 |
| MS.gene053420 | MS.gene69132 | -0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene69132 | 0.874167 | 8.35E-68 | -1.69E-46 |
| MS.gene053480 | MS.gene69132 | 0.832531 | 8.96E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene69132 | 0.907042 | 7.77E-81 | -1.69E-46 |
| MS.gene053626 | MS.gene69132 | 0.89874 | 3.94E-77 | -1.69E-46 |
| MS.gene053632 | MS.gene69132 | 0.836593 | 8.55E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene69132 | 0.801564 | 8.48E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene69132 | 0.841284 | 5.22E-58 | -1.69E-46 |
| MS.gene053912 | MS.gene69132 | 0.821835 | 3.27E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene69132 | 0.844353 | 7.97E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene69132 | 0.86723 | 1.59E-65 | -1.69E-46 |
| MS.gene054408 | MS.gene69132 | 0.868382 | 6.81E-66 | -1.69E-46 |
| MS.gene054595 | MS.gene69132 | 0.874297 | 7.54E-68 | -1.69E-46 |
| MS.gene054600 | MS.gene69132 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene69132 | 0.85347 | 2.34E-61 | -1.69E-46 |
| MS.gene054706 | MS.gene69132 | -0.817687 | 2.90E-52 | -1.69E-46 |
| MS.gene054707 | MS.gene69132 | -0.801563 | 8.49E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene69132 | -0.802043 | 6.77E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene69132 | 0.842216 | 2.96E-58 | -1.69E-46 |
| MS.gene054742 | MS.gene69132 | -0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene69132 | 0.83653 | 8.86E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene69132 | 0.860775 | 1.63E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene69132 | 0.86281 | 3.89E-64 | -1.69E-46 |
| MS.gene055124 | MS.gene69132 | -0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene055139 | MS.gene69132 | -0.806428 | 8.27E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene69132 | -0.822565 | 2.21E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene69132 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene69132 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene69132 | 0.819956 | 8.84E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene69132 | 0.865517 | 5.58E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene69132 | 0.87018 | 1.77E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene69132 | 0.835547 | 1.57E-56 | -1.69E-46 |
| MS.gene055629 | MS.gene69132 | 0.8799 | 8.54E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene69132 | 0.846937 | 1.59E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene69132 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene69132 | 0.835916 | 1.27E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene69132 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene055776 | MS.gene69132 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene69132 | 0.849829 | 2.51E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene69132 | 0.836352 | 9.84E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene69132 | 0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene69132 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene69132 | 0.836713 | 7.96E-57 | -1.69E-46 |
| MS.gene056040 | MS.gene69132 | 0.840464 | 8.56E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene69132 | 0.82918 | 5.95E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene69132 | 0.867385 | 1.42E-65 | -1.69E-46 |
| MS.gene056313 | MS.gene69132 | -0.809685 | 1.67E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene69132 | 0.848134 | 7.44E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene69132 | 0.821817 | 3.30E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene69132 | 0.854049 | 1.59E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene69132 | 0.845755 | 3.33E-59 | -1.69E-46 |
| MS.gene056448 | MS.gene69132 | 0.84474 | 6.27E-59 | -1.69E-46 |
| MS.gene056487 | MS.gene69132 | 0.822946 | 1.80E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene69132 | 0.887464 | 1.39E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene69132 | 0.86537 | 6.20E-65 | -1.69E-46 |
| MS.gene056511 | MS.gene69132 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene69132 | 0.873253 | 1.70E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene69132 | 0.800767 | 1.24E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene69132 | 0.830564 | 2.74E-55 | -1.69E-46 |
| MS.gene056942 | MS.gene69132 | 0.808964 | 2.39E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene69132 | 0.818847 | 1.58E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene69132 | 0.838914 | 2.17E-57 | -1.69E-46 |
| MS.gene057086 | MS.gene69132 | 0.875628 | 2.65E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene69132 | 0.805724 | 1.16E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene69132 | 0.848793 | 4.89E-60 | -1.69E-46 |
| MS.gene057734 | MS.gene69132 | 0.844241 | 8.54E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene69132 | 0.83926 | 1.76E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene69132 | 0.870044 | 1.96E-66 | -1.69E-46 |
| MS.gene057926 | MS.gene69132 | 0.822607 | 2.16E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene69132 | 0.803707 | 3.07E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene69132 | 0.840473 | 8.51E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene69132 | 0.860867 | 1.53E-63 | -1.69E-46 |
| MS.gene058171 | MS.gene69132 | -0.830304 | 3.17E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene69132 | -0.818195 | 2.23E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene69132 | -0.827971 | 1.17E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene69132 | 0.808203 | 3.47E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene69132 | 0.84723 | 1.32E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene69132 | 0.8615 | 9.82E-64 | -1.69E-46 |
| MS.gene058420 | MS.gene69132 | 0.8237 | 1.20E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene69132 | 0.815254 | 1.02E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene69132 | 0.847485 | 1.12E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene69132 | 0.821861 | 3.22E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene69132 | 0.824267 | 8.85E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene69132 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene69132 | 0.859198 | 4.88E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene69132 | 0.816375 | 5.71E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene69132 | -0.824814 | 6.58E-54 | -1.69E-46 |
| MS.gene059045 | MS.gene69132 | -0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene05913 | MS.gene69132 | 0.850072 | 2.15E-60 | -1.69E-46 |
| MS.gene059223 | MS.gene69132 | -0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene69132 | 0.843269 | 1.55E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene69132 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene69132 | 0.891028 | 5.77E-74 | -1.69E-46 |
| MS.gene059368 | MS.gene69132 | 0.85789 | 1.20E-62 | -1.69E-46 |
| MS.gene059517 | MS.gene69132 | 0.835606 | 1.52E-56 | -1.69E-46 |
| MS.gene059667 | MS.gene69132 | 0.84096 | 6.35E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene69132 | 0.835591 | 1.53E-56 | -1.69E-46 |
| MS.gene059680 | MS.gene69132 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene69132 | 0.862971 | 3.47E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene69132 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene69132 | 0.823922 | 1.07E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene69132 | 0.887789 | 1.05E-72 | -1.69E-46 |
| MS.gene06000 | MS.gene69132 | 0.831194 | 1.92E-55 | -1.69E-46 |
| MS.gene060295 | MS.gene69132 | 0.811238 | 7.74E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene69132 | 0.811821 | 5.78E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene69132 | 0.879809 | 9.20E-70 | -1.69E-46 |
| MS.gene060595 | MS.gene69132 | -0.815279 | 1.00E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene69132 | 0.81543 | 9.28E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene69132 | 0.857049 | 2.13E-62 | -1.69E-46 |
| MS.gene060778 | MS.gene69132 | 0.904783 | 8.55E-80 | -1.69E-46 |
| MS.gene06077 | MS.gene69132 | 0.881343 | 2.60E-70 | -1.69E-46 |
| MS.gene060804 | MS.gene69132 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene69132 | 0.838125 | 3.46E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene69132 | 0.827924 | 1.20E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene69132 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene69132 | 0.861452 | 1.02E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene69132 | 0.854752 | 9.98E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene69132 | 0.81728 | 3.58E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene69132 | 0.840448 | 8.64E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene69132 | 0.803174 | 3.95E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69132.t1 | MTR_3g111700 | 95.405 | 457 | 18 | 1 | 1 | 457 | 101 | 554 | 0.0 | 877 |
| MS.gene69132.t1 | MTR_3g111700 | 94.530 | 457 | 18 | 2 | 1 | 457 | 101 | 550 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTTCTCAATATATAAA+TGG | 0.108600 | 3.4:-96713783 | MS.gene69132:CDS |
| CATTCTCAACTGTATGAATA+TGG | 0.206106 | 3.4:+96712577 | None:intergenic |
| GAAATGGAATTTATCATTAC+TGG | 0.227553 | 3.4:+96713798 | None:intergenic |
| ATTCTGCTGTGACAAATTAT+TGG | 0.231869 | 3.4:+96712639 | None:intergenic |
| GTTTGCTTCTCTCGACATTC+TGG | 0.237218 | 3.4:+96713150 | None:intergenic |
| TCTTCCTTCTTTGGATTCAT+AGG | 0.264090 | 3.4:+96713097 | None:intergenic |
| TTATCATTACTGGTATTATT+AGG | 0.276310 | 3.4:+96713808 | None:intergenic |
| GCTTTAGCATCATATGTAAT+AGG | 0.281784 | 3.4:+96713397 | None:intergenic |
| ATGGGAAAAGGCCGAGTTAA+AGG | 0.292599 | 3.4:-96712992 | MS.gene69132:CDS |
| AACTGTATGAATATGGGATT+TGG | 0.294736 | 3.4:+96712584 | None:intergenic |
| GAAGAACCATTGTATGTTAT+AGG | 0.299531 | 3.4:+96713577 | None:intergenic |
| GAACAGAGAATGTAATGATT+TGG | 0.304595 | 3.4:+96713294 | None:intergenic |
| GTCCGCTCCATTTGCCAATA+TGG | 0.309597 | 3.4:+96714080 | None:intergenic |
| ACTCTTATTAAAGATGTTCT+TGG | 0.312920 | 3.4:-96713424 | MS.gene69132:CDS |
| GAGCTTTGGCGGAAATGATA+TGG | 0.318249 | 3.4:+96713473 | None:intergenic |
| ATCTCCTTCTTGGACTGTTC+AGG | 0.335287 | 3.4:+96712691 | None:intergenic |
| CCCATTTATATATTGAGAAA+TGG | 0.354288 | 3.4:+96713782 | None:intergenic |
| GAGGTTCTTTCTGTCCTAAA+AGG | 0.357444 | 3.4:+96713730 | None:intergenic |
| GATCAGCCTTCCTGCCATAT+TGG | 0.360624 | 3.4:-96714094 | MS.gene69132:intron |
| CGATGAATCTGGTTGAGCTT+TGG | 0.366851 | 3.4:+96713459 | None:intergenic |
| GGAGCGGACCTTCAGACATT+TGG | 0.378166 | 3.4:-96714066 | MS.gene69132:CDS |
| CGACACAAAATCTCGACTTC+AGG | 0.380047 | 3.4:-96712912 | MS.gene69132:CDS |
| ATTAAGCCCAGGCAGAAGTA+TGG | 0.383465 | 3.4:-96713011 | MS.gene69132:CDS |
| TACGGTATAGATCTCCTTCT+TGG | 0.394543 | 3.4:+96712681 | None:intergenic |
| AACAGAGAATGTAATGATTT+GGG | 0.395410 | 3.4:+96713295 | None:intergenic |
| TGACGGCTGCTCGATGAATC+TGG | 0.398504 | 3.4:+96713448 | None:intergenic |
| GCAGCAGCATCACGTCTCTT+TGG | 0.402843 | 3.4:+96714995 | None:intergenic |
| AACGGCATTGCTGCTTCAAA+TGG | 0.405104 | 3.4:-96714012 | MS.gene69132:CDS |
| TACCGTAGAGACCATTGATA+TGG | 0.407659 | 3.4:-96712665 | MS.gene69132:CDS |
| AGACATTTGGTTCCCCTCCC+AGG | 0.409281 | 3.4:-96714053 | MS.gene69132:CDS |
| GCCTGGGCTTAATGAACCTC+GGG | 0.409633 | 3.4:+96713021 | None:intergenic |
| CCATTTCTCAATATATAAAT+GGG | 0.420049 | 3.4:-96713782 | MS.gene69132:CDS |
| CATCTTTAATAAGAGTTTGA+CGG | 0.438109 | 3.4:+96713431 | None:intergenic |
| ACAAGCAGAAAGGAGCTGTA+AGG | 0.440799 | 3.4:-96712880 | MS.gene69132:CDS |
| GTTAAGTGGATTCGTACTCC+TGG | 0.442167 | 3.4:+96714035 | None:intergenic |
| GAAGCAAGTGGTTGAAGAGC+AGG | 0.447957 | 3.4:+96714965 | None:intergenic |
| ATTCTCAACTGTATGAATAT+GGG | 0.460550 | 3.4:+96712578 | None:intergenic |
| CTTTGTCTACTTCATCAGAC+TGG | 0.466557 | 3.4:+96713872 | None:intergenic |
| CAGAATGATATCTCAGCATC+AGG | 0.467976 | 3.4:-96712622 | MS.gene69132:CDS |
| TGAATCTGGTTGAGCTTTGG+CGG | 0.468974 | 3.4:+96713462 | None:intergenic |
| GCAGCAATGCCGTTGTTAAG+TGG | 0.469551 | 3.4:+96714021 | None:intergenic |
| AAGTAAAGGTGTGGTGCCTT+TGG | 0.470139 | 3.4:-96713758 | MS.gene69132:CDS |
| CTTTGACCTTCCCTTTAACT+CGG | 0.482481 | 3.4:+96712981 | None:intergenic |
| TTTGGTGTTGAACACCCACT+TGG | 0.483247 | 3.4:+96715013 | None:intergenic |
| GTCAGTGACAATCCATTCCT+TGG | 0.484645 | 3.4:+96713666 | None:intergenic |
| AATAGACTTTGCCTGTAAGT+TGG | 0.486583 | 3.4:+96713919 | None:intergenic |
| TGGGAAAAGGCCGAGTTAAA+GGG | 0.491286 | 3.4:-96712991 | MS.gene69132:CDS |
| GACACAAAATCTCGACTTCA+GGG | 0.493171 | 3.4:-96712911 | MS.gene69132:CDS |
| TGCCTGGGCTTAATGAACCT+CGG | 0.498970 | 3.4:+96713020 | None:intergenic |
| AATGCTCGAGCGCCAAGGAA+TGG | 0.528812 | 3.4:-96713678 | MS.gene69132:CDS |
| CTTCCTGCCATATTGGCAAA+TGG | 0.531469 | 3.4:-96714087 | MS.gene69132:CDS |
| AAAGGAAAACCTGAAGGATG+GGG | 0.532252 | 3.4:+96714934 | None:intergenic |
| TTAAGTGGATTCGTACTCCT+GGG | 0.532485 | 3.4:+96714036 | None:intergenic |
| CAAGCAGAAAGGAGCTGTAA+GGG | 0.533958 | 3.4:-96712879 | MS.gene69132:CDS |
| TCACTGACGATCCATTCCTT+AGG | 0.534108 | 3.4:+96713622 | None:intergenic |
| AAAAGGAAAACCTGAAGGAT+GGG | 0.538970 | 3.4:+96714933 | None:intergenic |
| ATATATAAATGGGCAAGTAA+AGG | 0.543545 | 3.4:-96713772 | MS.gene69132:CDS |
| ACAAATGAGATAGTCTCTGA+TGG | 0.547748 | 3.4:-96713355 | MS.gene69132:CDS |
| TTAAGCCCAGGCAGAAGTAT+GGG | 0.550489 | 3.4:-96713010 | MS.gene69132:CDS |
| AGCCATATCAATGGTCTCTA+CGG | 0.552400 | 3.4:+96712663 | None:intergenic |
| CACTCAAAATGATAGTCCTA+AGG | 0.553900 | 3.4:-96713638 | MS.gene69132:CDS |
| GCTCCATTTGCCAATATGGC+AGG | 0.554749 | 3.4:+96714084 | None:intergenic |
| AAAATGATAGTCCTAAGGAA+TGG | 0.557461 | 3.4:-96713633 | MS.gene69132:CDS |
| GAAAAGGAAAACCTGAAGGA+TGG | 0.560252 | 3.4:+96714932 | None:intergenic |
| GGTTATAAGTACAAGCAGAA+AGG | 0.564303 | 3.4:-96712890 | MS.gene69132:CDS |
| ATTATTGGCAGCCATATCAA+TGG | 0.564382 | 3.4:+96712654 | None:intergenic |
| TATTCCTATGAATCCAAAGA+AGG | 0.566231 | 3.4:-96713101 | MS.gene69132:CDS |
| CAAAAGACAGATTCTAAGAG+AGG | 0.566877 | 3.4:-96713067 | MS.gene69132:CDS |
| CCCCGAGGTTCATTAAGCCC+AGG | 0.568675 | 3.4:-96713022 | MS.gene69132:CDS |
| CCAGGCAGAAGTATGGGAAA+AGG | 0.572912 | 3.4:-96713004 | MS.gene69132:CDS |
| GTGGATTCGTACTCCTGGGA+GGG | 0.575566 | 3.4:+96714040 | None:intergenic |
| GTCCTAAAAGGCATCGCCAA+AGG | 0.575764 | 3.4:+96713742 | None:intergenic |
| AAGGAAAACCTGAAGGATGG+GGG | 0.591397 | 3.4:+96714935 | None:intergenic |
| AATGTCGAGAGAAGCAAACA+TGG | 0.593704 | 3.4:-96713146 | MS.gene69132:CDS |
| CAGGCAAAGTCTATTATCGA+AGG | 0.598865 | 3.4:-96713911 | MS.gene69132:CDS |
| GATAGTCCTATAACATACAA+TGG | 0.611800 | 3.4:-96713583 | MS.gene69132:CDS |
| TGAGAAATGCTCGAGCGCCA+AGG | 0.611961 | 3.4:-96713683 | MS.gene69132:CDS |
| AAATGATATGGTCTACACTC+TGG | 0.612190 | 3.4:+96713485 | None:intergenic |
| TGATCCTGAACAGTCCAAGA+AGG | 0.614384 | 3.4:-96712695 | MS.gene69132:CDS |
| TGGATTCGTACTCCTGGGAG+GGG | 0.619234 | 3.4:+96714041 | None:intergenic |
| AGGAAAACCTGAAGGATGGG+GGG | 0.620328 | 3.4:+96714936 | None:intergenic |
| TGCCATATTGGCAAATGGAG+CGG | 0.623853 | 3.4:-96714082 | MS.gene69132:CDS |
| GAGGGGAACCAAATGTCTGA+AGG | 0.638577 | 3.4:+96714058 | None:intergenic |
| CATTTGCCAATATGGCAGGA+AGG | 0.645218 | 3.4:+96714088 | None:intergenic |
| TAAATGGGCAAGTAAAGGTG+TGG | 0.649679 | 3.4:-96713767 | MS.gene69132:CDS |
| TCACAGTCTCAAACTCCAAG+TGG | 0.649969 | 3.4:-96715028 | MS.gene69132:CDS |
| CACAGTCTCAAACTCCAAGT+GGG | 0.653516 | 3.4:-96715027 | MS.gene69132:CDS |
| CAGTCTGATGAAGTAGACAA+AGG | 0.654264 | 3.4:-96713871 | MS.gene69132:CDS |
| AAAAGGCCGAGTTAAAGGGA+AGG | 0.661454 | 3.4:-96712987 | MS.gene69132:CDS |
| TTAGGACAGAAAGAACCTCA+AGG | 0.665779 | 3.4:-96713726 | MS.gene69132:CDS |
| AGTGGATTCGTACTCCTGGG+AGG | 0.672288 | 3.4:+96714039 | None:intergenic |
| TATAGCAAAGCTACTCCCCG+AGG | 0.719005 | 3.4:-96713037 | MS.gene69132:CDS |
| AGTACGAATCCACTTAACAA+CGG | 0.729752 | 3.4:-96714030 | MS.gene69132:CDS |
| CCTGGGCTTAATGAACCTCG+GGG | 0.733725 | 3.4:+96713022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACTAAATTAAAACTTTA+GGG | - | chr3.4:96713117-96713136 | MS.gene69132:CDS | 10.0% |
| !! | ATACTAAATTAAAACTTTAG+GGG | - | chr3.4:96713118-96713137 | MS.gene69132:CDS | 15.0% |
| !! | GTATACTAAATTAAAACTTT+AGG | - | chr3.4:96713116-96713135 | MS.gene69132:CDS | 15.0% |
| !!! | AAAAAAGTATAGCATAAAAT+TGG | + | chr3.4:96712748-96712767 | None:intergenic | 15.0% |
| !!! | ACTTTAAAACCATATTTTAA+AGG | - | chr3.4:96712843-96712862 | MS.gene69132:intron | 15.0% |
| !!! | ATTTTTTAACATTTCAATTG+TGG | + | chr3.4:96713337-96713356 | None:intergenic | 15.0% |
| !!! | CTTTAAAACCATATTTTAAA+GGG | - | chr3.4:96712844-96712863 | MS.gene69132:intron | 15.0% |
| !! | AAAGAGTAATAAAAAACAAG+AGG | - | chr3.4:96714059-96714078 | MS.gene69132:CDS | 20.0% |
| !! | CCATTTCTCAATATATAAAT+GGG | - | chr3.4:96713828-96713847 | MS.gene69132:CDS | 20.0% |
| !! | TCCATTTCTCAATATATAAA+TGG | - | chr3.4:96713827-96713846 | MS.gene69132:CDS | 20.0% |
| !! | TTATCATTACTGGTATTATT+AGG | + | chr3.4:96713805-96713824 | None:intergenic | 20.0% |
| !!! | AGTTTTAACTTTGAAAAAGA+AGG | + | chr3.4:96712719-96712738 | None:intergenic | 20.0% |
| !!! | GTAAAATTAGTTTACATTGA+CGG | - | chr3.4:96712901-96712920 | MS.gene69132:CDS | 20.0% |
| ! | AACAGAGAATGTAATGATTT+GGG | + | chr3.4:96714318-96714337 | None:intergenic | 25.0% |
| ! | AAGTATAGCATAAAATTGGT+TGG | + | chr3.4:96712744-96712763 | None:intergenic | 25.0% |
| ! | ACTCTTATTAAAGATGTTCT+TGG | - | chr3.4:96714186-96714205 | MS.gene69132:intron | 25.0% |
| ! | AGATTTATTTCAATTCTCAC+AGG | - | chr3.4:96714885-96714904 | MS.gene69132:intron | 25.0% |
| ! | ATATATAAATGGGCAAGTAA+AGG | - | chr3.4:96713838-96713857 | MS.gene69132:CDS | 25.0% |
| ! | ATTACTTCTAATTAAGGTCT+TGG | + | chr3.4:96713310-96713329 | None:intergenic | 25.0% |
| ! | ATTGCTAAAAGCTAACAAAA+TGG | - | chr3.4:96713211-96713230 | MS.gene69132:intron | 25.0% |
| ! | CATCTTTAATAAGAGTTTGA+CGG | + | chr3.4:96714182-96714201 | None:intergenic | 25.0% |
| ! | CCCATTTATATATTGAGAAA+TGG | + | chr3.4:96713831-96713850 | None:intergenic | 25.0% |
| ! | GAAATGGAATTTATCATTAC+TGG | + | chr3.4:96713815-96713834 | None:intergenic | 25.0% |
| ! | GGACATATTACTTCTAATTA+AGG | + | chr3.4:96713316-96713335 | None:intergenic | 25.0% |
| ! | GTTTACAGTTGTTTAGTTAT+TGG | - | chr3.4:96714857-96714876 | MS.gene69132:intron | 25.0% |
| ! | TGATGTTTAAATAGATTCCA+AGG | + | chr3.4:96713280-96713299 | None:intergenic | 25.0% |
| ! | TTTGAAAAAGAAGGTGAAAA+AGG | + | chr3.4:96712710-96712729 | None:intergenic | 25.0% |
| !! | ATTTTACATTCATCGTGTAT+CGG | + | chr3.4:96712950-96712969 | None:intergenic | 25.0% |
| !!! | CTTGTTTCTTACTGTTTTTA+CGG | + | chr3.4:96714341-96714360 | None:intergenic | 25.0% |
| !!! | GGTTTTAAAGTGAATTTATG+TGG | + | chr3.4:96712834-96712853 | None:intergenic | 25.0% |
| AAAATGATAGTCCTAAGGAA+TGG | - | chr3.4:96713977-96713996 | MS.gene69132:CDS | 30.0% | |
| AACTGTATGAATATGGGATT+TGG | + | chr3.4:96715029-96715048 | None:intergenic | 30.0% | |
| ATTCTGCTGTGACAAATTAT+TGG | + | chr3.4:96714974-96714993 | None:intergenic | 30.0% | |
| CGTAAAAACAGTAAGAAACA+AGG | - | chr3.4:96714339-96714358 | MS.gene69132:intron | 30.0% | |
| GAACAGAGAATGTAATGATT+TGG | + | chr3.4:96714319-96714338 | None:intergenic | 30.0% | |
| GAAGAACCATTGTATGTTAT+AGG | + | chr3.4:96714036-96714055 | None:intergenic | 30.0% | |
| GATAGTCCTATAACATACAA+TGG | - | chr3.4:96714027-96714046 | MS.gene69132:CDS | 30.0% | |
| GCTTTAGCATCATATGTAAT+AGG | + | chr3.4:96714216-96714235 | None:intergenic | 30.0% | |
| GTAGATACTCACATTATTGA+AGG | - | chr3.4:96714786-96714805 | MS.gene69132:intron | 30.0% | |
| TATTCCTATGAATCCAAAGA+AGG | - | chr3.4:96714509-96714528 | MS.gene69132:intron | 30.0% | |
| TTCCACAATCAGTAAAAACA+AGG | - | chr3.4:96714092-96714111 | MS.gene69132:intron | 30.0% | |
| TTTATTTCAATTCTCACAGG+TGG | - | chr3.4:96714888-96714907 | MS.gene69132:intron | 30.0% | |
| ! | AATCTTATCTTTTGTCCTTG+AGG | + | chr3.4:96713902-96713921 | None:intergenic | 30.0% |
| ! | ATGATTTTAAGCCAACTTAC+AGG | - | chr3.4:96713680-96713699 | MS.gene69132:CDS | 30.0% |
| ! | TATAGGACTATCATTTTGTG+TGG | + | chr3.4:96714019-96714038 | None:intergenic | 30.0% |
| !! | CCATATTTTAAAGGGAATGA+TGG | - | chr3.4:96712852-96712871 | MS.gene69132:intron | 30.0% |
| !! | CCATCATTCCCTTTAAAATA+TGG | + | chr3.4:96712855-96712874 | None:intergenic | 30.0% |
| !!! | TACCTTGTTTTTACTGATTG+TGG | + | chr3.4:96714097-96714116 | None:intergenic | 30.0% |
| AAAAGGAAAACCTGAAGGAT+GGG | + | chr3.4:96712680-96712699 | None:intergenic | 35.0% | |
| AAACAAGGTAAAGCTGTCTT+TGG | - | chr3.4:96714354-96714373 | MS.gene69132:intron | 35.0% | |
| AAAGGAAAAGGAAAACCTGA+AGG | + | chr3.4:96712685-96712704 | None:intergenic | 35.0% | |
| AAATGATATGGTCTACACTC+TGG | + | chr3.4:96714128-96714147 | None:intergenic | 35.0% | |
| AAGAAGGTGAAAAAGGTGAA+AGG | + | chr3.4:96712703-96712722 | None:intergenic | 35.0% | |
| AAGCTAACAAAATGGCAATG+TGG | - | chr3.4:96713219-96713238 | MS.gene69132:intron | 35.0% | |
| AATAGACTTTGCCTGTAAGT+TGG | + | chr3.4:96713694-96713713 | None:intergenic | 35.0% | |
| AATTTGAATACGCTCGAATG+AGG | - | chr3.4:96714817-96714836 | MS.gene69132:intron | 35.0% | |
| ACAAATGAGATAGTCTCTGA+TGG | - | chr3.4:96714255-96714274 | MS.gene69132:intron | 35.0% | |
| AGTACGAATCCACTTAACAA+CGG | - | chr3.4:96713580-96713599 | MS.gene69132:CDS | 35.0% | |
| ATACACAAAGTTCCCTAAGA+AGG | + | chr3.4:96713100-96713119 | None:intergenic | 35.0% | |
| ATCATATGCACATTGACAGA+AGG | - | chr3.4:96713249-96713268 | MS.gene69132:intron | 35.0% | |
| ATTATTGGCAGCCATATCAA+TGG | + | chr3.4:96714959-96714978 | None:intergenic | 35.0% | |
| CAATGTATGTCTAGCACAAT+TGG | - | chr3.4:96713010-96713029 | MS.gene69132:CDS | 35.0% | |
| CACTCAAAATGATAGTCCTA+AGG | - | chr3.4:96713972-96713991 | MS.gene69132:CDS | 35.0% | |
| CTAAGAAGGTGAGAATACAA+GGG | + | chr3.4:96713086-96713105 | None:intergenic | 35.0% | |
| CTTGTATTCTCACCTTCTTA+GGG | - | chr3.4:96713085-96713104 | MS.gene69132:CDS | 35.0% | |
| GGTTATAAGTACAAGCAGAA+AGG | - | chr3.4:96714720-96714739 | MS.gene69132:intron | 35.0% | |
| GTGAAAAAGGTGAAAGGAAA+AGG | + | chr3.4:96712697-96712716 | None:intergenic | 35.0% | |
| TATTGACAATTATCACAGCG+TGG | + | chr3.4:96714413-96714432 | None:intergenic | 35.0% | |
| TCTAATTAAGGTCTTGGCAT+TGG | + | chr3.4:96713304-96713323 | None:intergenic | 35.0% | |
| TCTTCCTTCTTTGGATTCAT+AGG | + | chr3.4:96714516-96714535 | None:intergenic | 35.0% | |
| TCTTTCTATCTTTGTGTGTG+AGG | - | chr3.4:96714383-96714402 | MS.gene69132:intron | 35.0% | |
| TTCTGTCAATGTGCATATGA+TGG | + | chr3.4:96713250-96713269 | None:intergenic | 35.0% | |
| ! | ATTGACAGAAGGATTTTCCT+TGG | - | chr3.4:96713260-96713279 | MS.gene69132:intron | 35.0% |
| ! | CAAAAGACAGATTCTAAGAG+AGG | - | chr3.4:96714543-96714562 | MS.gene69132:intron | 35.0% |
| ! | CTTAGGACTATCATTTTGAG+TGG | + | chr3.4:96713974-96713993 | None:intergenic | 35.0% |
| ! | TGCTTTTCATCTTCCTTCTT+TGG | + | chr3.4:96714525-96714544 | None:intergenic | 35.0% |
| AAAGGAAAACCTGAAGGATG+GGG | + | chr3.4:96712679-96712698 | None:intergenic | 40.0% | |
| AATGTCGAGAGAAGCAAACA+TGG | - | chr3.4:96714464-96714483 | MS.gene69132:intron | 40.0% | |
| AGCCATATCAATGGTCTCTA+CGG | + | chr3.4:96714950-96714969 | None:intergenic | 40.0% | |
| CAAGAGACTATGATCACATC+AGG | + | chr3.4:96713408-96713427 | None:intergenic | 40.0% | |
| CAGAATGATATCTCAGCATC+AGG | - | chr3.4:96714988-96715007 | MS.gene69132:CDS | 40.0% | |
| CAGGCAAAGTCTATTATCGA+AGG | - | chr3.4:96713699-96713718 | MS.gene69132:CDS | 40.0% | |
| CAGTCTGATGAAGTAGACAA+AGG | - | chr3.4:96713739-96713758 | MS.gene69132:CDS | 40.0% | |
| CCTAAGAAGGTGAGAATACA+AGG | + | chr3.4:96713087-96713106 | None:intergenic | 40.0% | |
| CCTTGTATTCTCACCTTCTT+AGG | - | chr3.4:96713084-96713103 | MS.gene69132:CDS | 40.0% | |
| CTTTGACCTTCCCTTTAACT+CGG | + | chr3.4:96714632-96714651 | None:intergenic | 40.0% | |
| CTTTGTCTACTTCATCAGAC+TGG | + | chr3.4:96713741-96713760 | None:intergenic | 40.0% | |
| GAAAAGGAAAACCTGAAGGA+TGG | + | chr3.4:96712681-96712700 | None:intergenic | 40.0% | |
| GACACAAAATCTCGACTTCA+GGG | - | chr3.4:96714699-96714718 | MS.gene69132:intron | 40.0% | |
| GAGGTTCTTTCTGTCCTAAA+AGG | + | chr3.4:96713883-96713902 | None:intergenic | 40.0% | |
| GTATGTCTAGCACAATTGGT+CGG | - | chr3.4:96713014-96713033 | MS.gene69132:CDS | 40.0% | |
| TAAATGGGCAAGTAAAGGTG+TGG | - | chr3.4:96713843-96713862 | MS.gene69132:CDS | 40.0% | |
| TACCGTAGAGACCATTGATA+TGG | - | chr3.4:96714945-96714964 | MS.gene69132:CDS | 40.0% | |
| TACGGTATAGATCTCCTTCT+TGG | + | chr3.4:96714932-96714951 | None:intergenic | 40.0% | |
| TTAGGACAGAAAGAACCTCA+AGG | - | chr3.4:96713884-96713903 | MS.gene69132:CDS | 40.0% | |
| TTGGAAGGAGTAAACATCAG+AGG | + | chr3.4:96713488-96713507 | None:intergenic | 40.0% | |
| ! | CGAGATTTTGTGTCGAGTTT+GGG | + | chr3.4:96714693-96714712 | None:intergenic | 40.0% |
| ! | TCGAGATTTTGTGTCGAGTT+TGG | + | chr3.4:96714694-96714713 | None:intergenic | 40.0% |
| ! | TTAAGTGGATTCGTACTCCT+GGG | + | chr3.4:96713577-96713596 | None:intergenic | 40.0% |
| AAAAGGCCGAGTTAAAGGGA+AGG | - | chr3.4:96714623-96714642 | MS.gene69132:intron | 45.0% | |
| AAGGAAAACCTGAAGGATGG+GGG | + | chr3.4:96712678-96712697 | None:intergenic | 45.0% | |
| ACAAGCAGAAAGGAGCTGTA+AGG | - | chr3.4:96714730-96714749 | MS.gene69132:intron | 45.0% | |
| ATCTCCTTCTTGGACTGTTC+AGG | + | chr3.4:96714922-96714941 | None:intergenic | 45.0% | |
| ATGGGAAAAGGCCGAGTTAA+AGG | - | chr3.4:96714618-96714637 | MS.gene69132:intron | 45.0% | |
| ATTAAGCCCAGGCAGAAGTA+TGG | - | chr3.4:96714599-96714618 | MS.gene69132:intron | 45.0% | |
| CAAGCAGAAAGGAGCTGTAA+GGG | - | chr3.4:96714731-96714750 | MS.gene69132:intron | 45.0% | |
| CACAGTCTCAAACTCCAAGT+GGG | - | chr3.4:96712583-96712602 | MS.gene69132:CDS | 45.0% | |
| CATTTGCCAATATGGCAGGA+AGG | + | chr3.4:96713525-96713544 | None:intergenic | 45.0% | |
| CGACACAAAATCTCGACTTC+AGG | - | chr3.4:96714698-96714717 | MS.gene69132:intron | 45.0% | |
| CGATGAATCTGGTTGAGCTT+TGG | + | chr3.4:96714154-96714173 | None:intergenic | 45.0% | |
| CTTCCTGCCATATTGGCAAA+TGG | - | chr3.4:96713523-96713542 | MS.gene69132:CDS | 45.0% | |
| GAAGGCTGATCAGTCGAATT+TGG | + | chr3.4:96713507-96713526 | None:intergenic | 45.0% | |
| GCTGATCAGTCGAATTTGGA+AGG | + | chr3.4:96713503-96713522 | None:intergenic | 45.0% | |
| GTCAGTGACAATCCATTCCT+TGG | + | chr3.4:96713947-96713966 | None:intergenic | 45.0% | |
| GTTTGCTTCTCTCGACATTC+TGG | + | chr3.4:96714463-96714482 | None:intergenic | 45.0% | |
| TCACAGTCTCAAACTCCAAG+TGG | - | chr3.4:96712582-96712601 | MS.gene69132:CDS | 45.0% | |
| TCACTGACGATCCATTCCTT+AGG | + | chr3.4:96713991-96714010 | None:intergenic | 45.0% | |
| TGATCCTGAACAGTCCAAGA+AGG | - | chr3.4:96714915-96714934 | MS.gene69132:intron | 45.0% | |
| TGCCATATTGGCAAATGGAG+CGG | - | chr3.4:96713528-96713547 | MS.gene69132:CDS | 45.0% | |
| TGGGAAAAGGCCGAGTTAAA+GGG | - | chr3.4:96714619-96714638 | MS.gene69132:intron | 45.0% | |
| ! | AACGGCATTGCTGCTTCAAA+TGG | - | chr3.4:96713598-96713617 | MS.gene69132:CDS | 45.0% |
| ! | AAGTAAAGGTGTGGTGCCTT+TGG | - | chr3.4:96713852-96713871 | MS.gene69132:CDS | 45.0% |
| ! | CTTTTCCCATACTTCTGCCT+GGG | + | chr3.4:96714608-96714627 | None:intergenic | 45.0% |
| ! | GAGCTTTGGCGGAAATGATA+TGG | + | chr3.4:96714140-96714159 | None:intergenic | 45.0% |
| ! | GTTAAGTGGATTCGTACTCC+TGG | + | chr3.4:96713578-96713597 | None:intergenic | 45.0% |
| ! | TGAATCTGGTTGAGCTTTGG+CGG | + | chr3.4:96714151-96714170 | None:intergenic | 45.0% |
| ! | TTAAGCCCAGGCAGAAGTAT+GGG | - | chr3.4:96714600-96714619 | MS.gene69132:intron | 45.0% |
| !! | TTTGGTGTTGAACACCCACT+TGG | + | chr3.4:96712600-96712619 | None:intergenic | 45.0% |
| ACAATTGGTCGGTGCGCAAT+GGG | - | chr3.4:96713025-96713044 | MS.gene69132:CDS | 50.0% | |
| AGGAAAACCTGAAGGATGGG+GGG | + | chr3.4:96712677-96712696 | None:intergenic | 50.0% | |
| GAAGCAAGTGGTTGAAGAGC+AGG | + | chr3.4:96712648-96712667 | None:intergenic | 50.0% | |
| GAGGGGAACCAAATGTCTGA+AGG | + | chr3.4:96713555-96713574 | None:intergenic | 50.0% | |
| GATCAGCCTTCCTGCCATAT+TGG | - | chr3.4:96713516-96713535 | MS.gene69132:CDS | 50.0% | |
| GCAGCAATGCCGTTGTTAAG+TGG | + | chr3.4:96713592-96713611 | None:intergenic | 50.0% | |
| GCTCCATTTGCCAATATGGC+AGG | + | chr3.4:96713529-96713548 | None:intergenic | 50.0% | |
| GTCCGCTCCATTTGCCAATA+TGG | + | chr3.4:96713533-96713552 | None:intergenic | 50.0% | |
| TATAGCAAAGCTACTCCCCG+AGG | - | chr3.4:96714573-96714592 | MS.gene69132:intron | 50.0% | |
| TGCCTGGGCTTAATGAACCT+CGG | + | chr3.4:96714593-96714612 | None:intergenic | 50.0% | |
| ! | CCAGGCAGAAGTATGGGAAA+AGG | - | chr3.4:96714606-96714625 | MS.gene69132:intron | 50.0% |
| ! | CCTTTTCCCATACTTCTGCC+TGG | + | chr3.4:96714609-96714628 | None:intergenic | 50.0% |
| ! | TGCCTTTGGCGATGCCTTTT+AGG | - | chr3.4:96713866-96713885 | MS.gene69132:CDS | 50.0% |
| !! | GTCCTAAAAGGCATCGCCAA+AGG | + | chr3.4:96713871-96713890 | None:intergenic | 50.0% |
| AATGCTCGAGCGCCAAGGAA+TGG | - | chr3.4:96713932-96713951 | MS.gene69132:CDS | 55.0% | |
| CACAATTGGTCGGTGCGCAA+TGG | - | chr3.4:96713024-96713043 | MS.gene69132:CDS | 55.0% | |
| CCTGGGCTTAATGAACCTCG+GGG | + | chr3.4:96714591-96714610 | None:intergenic | 55.0% | |
| GCAGCAGCATCACGTCTCTT+TGG | + | chr3.4:96712618-96712637 | None:intergenic | 55.0% | |
| GCCTGGGCTTAATGAACCTC+GGG | + | chr3.4:96714592-96714611 | None:intergenic | 55.0% | |
| GGAGCGGACCTTCAGACATT+TGG | - | chr3.4:96713544-96713563 | MS.gene69132:CDS | 55.0% | |
| GTGGATTCGTACTCCTGGGA+GGG | + | chr3.4:96713573-96713592 | None:intergenic | 55.0% | |
| TGACGGCTGCTCGATGAATC+TGG | + | chr3.4:96714165-96714184 | None:intergenic | 55.0% | |
| TGAGAAATGCTCGAGCGCCA+AGG | - | chr3.4:96713927-96713946 | MS.gene69132:CDS | 55.0% | |
| TGGATTCGTACTCCTGGGAG+GGG | + | chr3.4:96713572-96713591 | None:intergenic | 55.0% | |
| ! | AGACATTTGGTTCCCCTCCC+AGG | - | chr3.4:96713557-96713576 | MS.gene69132:CDS | 55.0% |
| ! | AGTGGATTCGTACTCCTGGG+AGG | + | chr3.4:96713574-96713593 | None:intergenic | 55.0% |
| CCCCGAGGTTCATTAAGCCC+AGG | - | chr3.4:96714588-96714607 | MS.gene69132:intron | 60.0% | |
| CTTCTCTCCCCCCATCCTTC+AGG | - | chr3.4:96712667-96712686 | MS.gene69132:CDS | 60.0% | |
| GGGGGGAGAGAAGAAGCAAG+TGG | + | chr3.4:96712660-96712679 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96712582 | 96715050 | 96712582 | ID=MS.gene69132 |
| chr3.4 | mRNA | 96712582 | 96715050 | 96712582 | ID=MS.gene69132.t1;Parent=MS.gene69132 |
| chr3.4 | exon | 96714944 | 96715050 | 96714944 | ID=MS.gene69132.t1.exon1;Parent=MS.gene69132.t1 |
| chr3.4 | CDS | 96714944 | 96715050 | 96714944 | ID=cds.MS.gene69132.t1;Parent=MS.gene69132.t1 |
| chr3.4 | exon | 96713272 | 96714110 | 96713272 | ID=MS.gene69132.t1.exon2;Parent=MS.gene69132.t1 |
| chr3.4 | CDS | 96713272 | 96714110 | 96713272 | ID=cds.MS.gene69132.t1;Parent=MS.gene69132.t1 |
| chr3.4 | exon | 96712868 | 96713187 | 96712868 | ID=MS.gene69132.t1.exon3;Parent=MS.gene69132.t1 |
| chr3.4 | CDS | 96712868 | 96713187 | 96712868 | ID=cds.MS.gene69132.t1;Parent=MS.gene69132.t1 |
| chr3.4 | exon | 96712582 | 96712725 | 96712582 | ID=MS.gene69132.t1.exon4;Parent=MS.gene69132.t1 |
| chr3.4 | CDS | 96712582 | 96712725 | 96712582 | ID=cds.MS.gene69132.t1;Parent=MS.gene69132.t1 |
| Gene Sequence |
| Protein sequence |
