Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22291.t1 | XP_024640058.1 | 99.8 | 405 | 1 | 0 | 1 | 405 | 69 | 473 | 8.30E-159 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22291.t1 | O22437 | 97.0 | 405 | 10 | 1 | 1 | 405 | 352 | 754 | 2.5e-156 | 553.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22291.t1 | G7K9A4 | 99.8 | 405 | 1 | 0 | 1 | 405 | 350 | 754 | 6.0e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene22291 | 0.81461 | 1.41E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene22291 | 0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene22291 | 0.865083 | 7.63E-65 | -1.69E-46 |
| MS.gene049356 | MS.gene22291 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene22291 | 0.817253 | 3.63E-52 | -1.69E-46 |
| MS.gene049389 | MS.gene22291 | 0.823093 | 1.67E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene22291 | 0.863421 | 2.52E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene22291 | 0.834445 | 2.98E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene22291 | 0.82122 | 4.53E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene22291 | 0.830837 | 2.35E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene22291 | 0.846694 | 1.85E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene22291 | 0.845136 | 4.90E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene22291 | 0.823417 | 1.40E-53 | -1.69E-46 |
| MS.gene049760 | MS.gene22291 | 0.836408 | 9.52E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene22291 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene049828 | MS.gene22291 | 0.820567 | 6.41E-53 | -1.69E-46 |
| MS.gene049907 | MS.gene22291 | 0.830136 | 3.48E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene22291 | 0.857414 | 1.66E-62 | -1.69E-46 |
| MS.gene050099 | MS.gene22291 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene22291 | 0.811452 | 6.95E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene22291 | 0.884911 | 1.28E-71 | -1.69E-46 |
| MS.gene050397 | MS.gene22291 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene22291 | 0.881756 | 1.84E-70 | -1.69E-46 |
| MS.gene050520 | MS.gene22291 | 0.823295 | 1.50E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene22291 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene22291 | 0.826123 | 3.22E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene22291 | 0.844258 | 8.45E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene22291 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene22291 | 0.89385 | 4.28E-75 | -1.69E-46 |
| MS.gene050770 | MS.gene22291 | 0.894998 | 1.45E-75 | -1.69E-46 |
| MS.gene050772 | MS.gene22291 | 0.834744 | 2.51E-56 | -1.69E-46 |
| MS.gene050783 | MS.gene22291 | 0.846025 | 2.81E-59 | -1.69E-46 |
| MS.gene050812 | MS.gene22291 | 0.815457 | 9.16E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene22291 | 0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene22291 | 0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene22291 | 0.881353 | 2.58E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene22291 | 0.869691 | 2.56E-66 | -1.69E-46 |
| MS.gene051228 | MS.gene22291 | 0.847892 | 8.67E-60 | -1.69E-46 |
| MS.gene051255 | MS.gene22291 | 0.836306 | 1.01E-56 | -1.69E-46 |
| MS.gene051360 | MS.gene22291 | 0.813738 | 2.20E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene22291 | 0.87014 | 1.83E-66 | -1.69E-46 |
| MS.gene051471 | MS.gene22291 | 0.835055 | 2.10E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene22291 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene22291 | 0.85017 | 2.02E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene22291 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene22291 | 0.819947 | 8.89E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene22291 | 0.820502 | 6.63E-53 | -1.69E-46 |
| MS.gene051877 | MS.gene22291 | 0.82947 | 5.06E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene22291 | 0.868878 | 4.71E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene22291 | 0.856184 | 3.82E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene22291 | 0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene22291 | 0.835135 | 2.00E-56 | -1.69E-46 |
| MS.gene052290 | MS.gene22291 | 0.867297 | 1.52E-65 | -1.69E-46 |
| MS.gene052293 | MS.gene22291 | 0.802972 | 4.35E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene22291 | 0.862718 | 4.16E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene22291 | 0.850257 | 1.91E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene22291 | 0.893319 | 7.02E-75 | -1.69E-46 |
| MS.gene052340 | MS.gene22291 | 0.807591 | 4.69E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene22291 | 0.840855 | 6.76E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene22291 | 0.83991 | 1.19E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene22291 | 0.810954 | 8.91E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene22291 | 0.842452 | 2.56E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene22291 | 0.832526 | 8.99E-56 | -1.69E-46 |
| MS.gene052508 | MS.gene22291 | 0.817014 | 4.11E-52 | -1.69E-46 |
| MS.gene052510 | MS.gene22291 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene22291 | 0.896089 | 5.16E-76 | -1.69E-46 |
| MS.gene053103 | MS.gene22291 | 0.859461 | 4.07E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene22291 | 0.85635 | 3.41E-62 | -1.69E-46 |
| MS.gene053107 | MS.gene22291 | 0.830117 | 3.52E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene22291 | 0.870407 | 1.49E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene22291 | 0.889047 | 3.44E-73 | -1.69E-46 |
| MS.gene053213 | MS.gene22291 | 0.821936 | 3.10E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene22291 | 0.814296 | 1.66E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene22291 | 0.886833 | 2.42E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene22291 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene22291 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene22291 | 0.82571 | 4.04E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene22291 | 0.82774 | 1.32E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene22291 | 0.809383 | 1.94E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene22291 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene22291 | 0.866762 | 2.25E-65 | -1.69E-46 |
| MS.gene054376 | MS.gene22291 | 0.894692 | 1.94E-75 | -1.69E-46 |
| MS.gene05455 | MS.gene22291 | 0.82393 | 1.06E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene22291 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene22291 | 0.82319 | 1.58E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene22291 | 0.869387 | 3.22E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene22291 | 0.870441 | 1.46E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene22291 | 0.873356 | 1.57E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene22291 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene22291 | 0.854012 | 1.63E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene22291 | 0.846016 | 2.83E-59 | -1.69E-46 |
| MS.gene055206 | MS.gene22291 | 0.804583 | 2.01E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene22291 | 0.862892 | 3.67E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene22291 | 0.876935 | 9.40E-69 | -1.69E-46 |
| MS.gene055390 | MS.gene22291 | 0.855887 | 4.66E-62 | -1.69E-46 |
| MS.gene055397 | MS.gene22291 | 0.865994 | 3.94E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene22291 | 0.851499 | 8.53E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene22291 | 0.862001 | 6.90E-64 | -1.69E-46 |
| MS.gene055428 | MS.gene22291 | 0.848747 | 5.03E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene22291 | 0.883085 | 6.05E-71 | -1.69E-46 |
| MS.gene055636 | MS.gene22291 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene22291 | 0.848933 | 4.47E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene22291 | 0.839198 | 1.83E-57 | -1.69E-46 |
| MS.gene055802 | MS.gene22291 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene055896 | MS.gene22291 | 0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene22291 | 0.871211 | 8.12E-67 | -1.69E-46 |
| MS.gene05602 | MS.gene22291 | 0.869989 | 2.05E-66 | -1.69E-46 |
| MS.gene056083 | MS.gene22291 | 0.854618 | 1.09E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene22291 | 0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene22291 | 0.817436 | 3.30E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene22291 | 0.865592 | 5.28E-65 | -1.69E-46 |
| MS.gene056410 | MS.gene22291 | 0.87444 | 6.74E-68 | -1.69E-46 |
| MS.gene056449 | MS.gene22291 | 0.813431 | 2.57E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene22291 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene22291 | 0.860838 | 1.56E-63 | -1.69E-46 |
| MS.gene056611 | MS.gene22291 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene22291 | 0.817953 | 2.52E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene22291 | 0.803151 | 4.00E-49 | -1.69E-46 |
| MS.gene056719 | MS.gene22291 | 0.801426 | 9.06E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene22291 | 0.848414 | 6.23E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene22291 | 0.853868 | 1.80E-61 | -1.69E-46 |
| MS.gene056931 | MS.gene22291 | 0.816969 | 4.20E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene22291 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene22291 | 0.810859 | 9.35E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene22291 | 0.863943 | 1.73E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene22291 | 0.82725 | 1.74E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene22291 | 0.83158 | 1.54E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene22291 | 0.817181 | 3.77E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene22291 | 0.879319 | 1.37E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene22291 | 0.856604 | 2.88E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene22291 | 0.838344 | 3.04E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene22291 | 0.847525 | 1.09E-59 | -1.69E-46 |
| MS.gene05735 | MS.gene22291 | 0.823537 | 1.31E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene22291 | 0.865807 | 4.52E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene22291 | 0.80528 | 1.44E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene22291 | 0.804285 | 2.32E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene22291 | 0.819072 | 1.41E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene22291 | 0.801209 | 1.00E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene22291 | 0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene22291 | 0.819589 | 1.07E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene22291 | 0.837892 | 3.98E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene22291 | 0.892917 | 1.02E-74 | -1.69E-46 |
| MS.gene05811 | MS.gene22291 | 0.817069 | 3.99E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene22291 | 0.802324 | 5.92E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene22291 | 0.808742 | 2.67E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene22291 | 0.885474 | 7.88E-72 | -1.69E-46 |
| MS.gene058323 | MS.gene22291 | 0.849916 | 2.38E-60 | -1.69E-46 |
| MS.gene058365 | MS.gene22291 | 0.836663 | 8.20E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene22291 | 0.908466 | 1.66E-81 | -1.69E-46 |
| MS.gene058723 | MS.gene22291 | 0.817563 | 3.09E-52 | -1.69E-46 |
| MS.gene058748 | MS.gene22291 | 0.815553 | 8.72E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene22291 | 0.805013 | 1.64E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene22291 | 0.848049 | 7.85E-60 | -1.69E-46 |
| MS.gene058903 | MS.gene22291 | 0.808102 | 3.65E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene22291 | 0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene058993 | MS.gene22291 | 0.840313 | 9.37E-58 | -1.69E-46 |
| MS.gene059029 | MS.gene22291 | 0.838653 | 2.53E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene22291 | 0.843771 | 1.14E-58 | -1.69E-46 |
| MS.gene059326 | MS.gene22291 | 0.819539 | 1.10E-52 | -1.69E-46 |
| MS.gene059342 | MS.gene22291 | 0.82338 | 1.43E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene22291 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene22291 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene22291 | 0.808436 | 3.10E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene22291 | 0.883734 | 3.49E-71 | -1.69E-46 |
| MS.gene059597 | MS.gene22291 | 0.846672 | 1.87E-59 | -1.69E-46 |
| MS.gene05959 | MS.gene22291 | 0.853593 | 2.16E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene22291 | 0.884347 | 2.07E-71 | -1.69E-46 |
| MS.gene059688 | MS.gene22291 | 0.888592 | 5.15E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene22291 | 0.889458 | 2.38E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene22291 | 0.891448 | 3.94E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene22291 | 0.819013 | 1.45E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene22291 | 0.874329 | 7.35E-68 | -1.69E-46 |
| MS.gene059718 | MS.gene22291 | 0.827251 | 1.73E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene22291 | 0.812706 | 3.71E-51 | -1.69E-46 |
| MS.gene05986 | MS.gene22291 | 0.832228 | 1.07E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene22291 | 0.817692 | 2.89E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene22291 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene22291 | 0.893391 | 6.57E-75 | -1.69E-46 |
| MS.gene059974 | MS.gene22291 | 0.835455 | 1.66E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene22291 | 0.826078 | 3.30E-54 | -1.69E-46 |
| MS.gene060193 | MS.gene22291 | 0.814041 | 1.89E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene22291 | 0.850712 | 1.42E-60 | -1.69E-46 |
| MS.gene06037 | MS.gene22291 | 0.83252 | 9.02E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene22291 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene22291 | 0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene22291 | 0.881374 | 2.53E-70 | -1.69E-46 |
| MS.gene060818 | MS.gene22291 | 0.84801 | 8.05E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene22291 | 0.861744 | 8.27E-64 | -1.69E-46 |
| MS.gene06090 | MS.gene22291 | 0.827936 | 1.19E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene22291 | 0.826293 | 2.94E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene22291 | 0.847226 | 1.32E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene22291 | 0.818277 | 2.13E-52 | -1.69E-46 |
| MS.gene061051 | MS.gene22291 | -0.848606 | 5.51E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene22291 | 0.821914 | 3.13E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene22291 | 0.909058 | 8.66E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22291.t1 | MTR_5g009070 | 99.753 | 405 | 1 | 0 | 1 | 405 | 350 | 754 | 0.0 | 815 |
| MS.gene22291.t1 | MTR_5g009070 | 99.301 | 286 | 2 | 0 | 1 | 286 | 350 | 635 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22291.t1 | AT1G08520 | 85.679 | 405 | 56 | 2 | 1 | 405 | 358 | 760 | 0.0 | 629 |
Find 102 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGTTCTTCATTGGATTCT+TGG | 0.130094 | 5.3:+3119044 | None:intergenic |
| AAGTCTTGTGATGTAGGTTT+AGG | 0.216172 | 5.3:+3115651 | None:intergenic |
| TTCTTCATTCTGTTCTTCAT+TGG | 0.223207 | 5.3:+3119036 | None:intergenic |
| CTGAAAATGTCTAGGCTGTT+AGG | 0.234330 | 5.3:-3115800 | MS.gene22291:intron |
| GATAAGGTGCAGCAGCTCTA+AGG | 0.296257 | 5.3:+3118081 | None:intergenic |
| CACGGCGCCTCTGTGCTTGT+TGG | 0.321269 | 5.3:+3118613 | None:intergenic |
| AGTCTTGTGATGTAGGTTTA+GGG | 0.328084 | 5.3:+3115652 | None:intergenic |
| TCAGTAGCGGCAGCAGCTTC+AGG | 0.330307 | 5.3:+3115678 | None:intergenic |
| GAAGCATTGGCTTGATATAT+CGG | 0.333120 | 5.3:+3118544 | None:intergenic |
| GAGCCAACATATCTTTAAAA+AGG | 0.334260 | 5.3:-3115710 | MS.gene22291:CDS |
| TGCTAAGTGTTTAGCTGCTC+TGG | 0.350030 | 5.3:-3120152 | MS.gene22291:CDS |
| TCAACTGCTAATCTCTTTAC+AGG | 0.364991 | 5.3:+3118110 | None:intergenic |
| AGGTGCAGCACTTAAGCTTC+TGG | 0.376539 | 5.3:-3116835 | MS.gene22291:CDS |
| ACGGCGCCTCTGTGCTTGTT+GGG | 0.379485 | 5.3:+3118614 | None:intergenic |
| CTATTATTTGCCAAATGCTT+CGG | 0.387462 | 5.3:-3114979 | MS.gene22291:CDS |
| GAAAACAAGTTTGTCTCAAC+AGG | 0.387463 | 5.3:-3115123 | MS.gene22291:CDS |
| ACCTACATCACAAGACTTGA+AGG | 0.395423 | 5.3:-3115646 | MS.gene22291:intron |
| CAGAGGCGCCGTGGGAAGGC+TGG | 0.396114 | 5.3:-3118603 | MS.gene22291:CDS |
| GCATCAAAGATAAATTCTTC+AGG | 0.419594 | 5.3:+3118675 | None:intergenic |
| TGTGGAGGCGGTGGAGGCGG+AGG | 0.426484 | 5.3:+3119070 | None:intergenic |
| GGAGGCGGTGGAGGCGGAGG+CGG | 0.438692 | 5.3:+3119073 | None:intergenic |
| ACAACAGCATCCGAAGCATT+TGG | 0.441288 | 5.3:+3114969 | None:intergenic |
| TGAAAATGTCTAGGCTGTTA+GGG | 0.448599 | 5.3:-3115799 | MS.gene22291:intron |
| GAAAGGCTTCCGTGTGGTGG+AGG | 0.449203 | 5.3:-3116203 | MS.gene22291:CDS |
| CAAAGAGGAAGAAGAAGAAG+AGG | 0.450450 | 5.3:-3119008 | MS.gene22291:CDS |
| AGGAGTACCTTTGGAAGCAT+TGG | 0.456193 | 5.3:+3118531 | None:intergenic |
| AAGTTATACAAGCAGGGATC+AGG | 0.461637 | 5.3:-3116808 | MS.gene22291:intron |
| TGCTCTGGAGGGACGTGAAA+AGG | 0.461890 | 5.3:-3120137 | MS.gene22291:CDS |
| GTGGAAGCATGGCATTGAAC+AGG | 0.466542 | 5.3:-3116872 | MS.gene22291:CDS |
| GCTGGGAAGATATATAAATC+AGG | 0.467269 | 5.3:-3115171 | MS.gene22291:CDS |
| GTTCAATGCCATGCTTCCAC+TGG | 0.469040 | 5.3:+3116875 | None:intergenic |
| GAATTTATCTTTGATGCTGA+AGG | 0.474323 | 5.3:-3118669 | MS.gene22291:CDS |
| GCCATTGCAATCGATCTAGA+AGG | 0.482231 | 5.3:+3116239 | None:intergenic |
| GCAGAGAAAAGTGGCGATGT+TGG | 0.482876 | 5.3:-3115765 | MS.gene22291:CDS |
| GGAGGGTCACCCCTTGCCCA+TGG | 0.485712 | 5.3:-3116185 | MS.gene22291:CDS |
| TTGCCCTTCCAGCCTTCCCA+CGG | 0.486145 | 5.3:+3118595 | None:intergenic |
| AAGAGAATGGCACGTAAAGC+AGG | 0.487735 | 5.3:-3117987 | MS.gene22291:CDS |
| ACCTTCAAGTCTTGTGATGT+AGG | 0.495933 | 5.3:+3115645 | None:intergenic |
| AACAGGATGCAGAATGCAAA+AGG | 0.496428 | 5.3:-3116855 | MS.gene22291:CDS |
| GATTATCAGTAACAATTGAC+CGG | 0.499688 | 5.3:+3119116 | None:intergenic |
| GCGCCGTGGGAAGGCTGGAA+GGG | 0.499835 | 5.3:-3118598 | MS.gene22291:CDS |
| GGCGCCGTGGGAAGGCTGGA+AGG | 0.507433 | 5.3:-3118599 | MS.gene22291:CDS |
| ATGAAATTCTTGAGGTGGCT+GGG | 0.509186 | 5.3:-3115188 | MS.gene22291:CDS |
| AATGTCTAGGCTGTTAGGGT+TGG | 0.518126 | 5.3:-3115795 | MS.gene22291:intron |
| TGACATGAGGGCAAAGAGAA+TGG | 0.518308 | 5.3:-3118000 | MS.gene22291:CDS |
| AGAGGAAGAAGAAGAAGAGG+AGG | 0.518585 | 5.3:-3119005 | MS.gene22291:intron |
| TGGCAGAAAGTTATACAAGC+AGG | 0.519429 | 5.3:-3116815 | MS.gene22291:CDS |
| ATAAGGTGCAGCAGCTCTAA+GGG | 0.521352 | 5.3:+3118082 | None:intergenic |
| GAATGAAGAAGAAGACAAAG+AGG | 0.523729 | 5.3:-3119023 | MS.gene22291:CDS |
| AACAAGCACAGAGGCGCCGT+GGG | 0.528819 | 5.3:-3118611 | MS.gene22291:CDS |
| AGCACAGAGGCGCCGTGGGA+AGG | 0.530519 | 5.3:-3118607 | MS.gene22291:CDS |
| GATGAAATTCTTGAGGTGGC+TGG | 0.531208 | 5.3:-3115189 | MS.gene22291:CDS |
| TTCGGATGCTGTTGTCTCGA+TGG | 0.532713 | 5.3:-3114961 | MS.gene22291:CDS |
| GGCACGTAAAGCAGGAGCAT+TGG | 0.535611 | 5.3:-3117979 | MS.gene22291:intron |
| CTTGAAAGGCTTCCGTGTGG+TGG | 0.535913 | 5.3:-3116206 | MS.gene22291:CDS |
| CACCTTATCAAAAGTTGCGA+AGG | 0.536565 | 5.3:-3118067 | MS.gene22291:CDS |
| CGTGGTAAGACCATGGGCAA+GGG | 0.542333 | 5.3:+3116175 | None:intergenic |
| AATGAAGGATGAAATTCTTG+AGG | 0.542686 | 5.3:-3115196 | MS.gene22291:intron |
| ATTGTTGTAGGTGATATTTG+TGG | 0.543715 | 5.3:-3116904 | MS.gene22291:intron |
| AATTTATCTTTGATGCTGAA+GGG | 0.551889 | 5.3:-3118668 | MS.gene22291:CDS |
| GGATGACAAGGATGAAGAGA+AGG | 0.558689 | 5.3:-3118718 | MS.gene22291:CDS |
| TAAGTGTTTAGCTGCTCTGG+AGG | 0.561546 | 5.3:-3120149 | MS.gene22291:CDS |
| AAAGGCTTCCGTGTGGTGGA+GGG | 0.562835 | 5.3:-3116202 | MS.gene22291:CDS |
| ATTTATCTTTGATGCTGAAG+GGG | 0.570562 | 5.3:-3118667 | MS.gene22291:CDS |
| CTGTTGTCTCGATGGCAACA+AGG | 0.573710 | 5.3:-3114953 | MS.gene22291:CDS |
| CCGTGGTAAGACCATGGGCA+AGG | 0.574710 | 5.3:+3116174 | None:intergenic |
| TGGCTAGGAAACGTCTTGAA+AGG | 0.581024 | 5.3:-3116220 | MS.gene22291:CDS |
| CAACAAGCACAGAGGCGCCG+TGG | 0.582485 | 5.3:-3118612 | MS.gene22291:CDS |
| GGATTAAATGCAGAGAAAAG+TGG | 0.591384 | 5.3:-3115774 | MS.gene22291:CDS |
| TCTTTCTGAACAGGATGACA+AGG | 0.597752 | 5.3:-3118730 | MS.gene22291:intron |
| ATTATCAGTAACAATTGACC+GGG | 0.598200 | 5.3:+3119117 | None:intergenic |
| GTCTTGTGATGTAGGTTTAG+GGG | 0.600617 | 5.3:+3115653 | None:intergenic |
| GGCAGAAAGTTATACAAGCA+GGG | 0.600782 | 5.3:-3116814 | MS.gene22291:CDS |
| CTAGATCGATTGCAATGGCT+AGG | 0.601938 | 5.3:-3116235 | MS.gene22291:CDS |
| GAGATTGCTAGAGTTGCTCA+AGG | 0.602162 | 5.3:-3115090 | MS.gene22291:intron |
| TGCATACCGTGGTAAGACCA+TGG | 0.605407 | 5.3:+3116168 | None:intergenic |
| TAGAATTGGTCATTCTCCCC+CGG | 0.606496 | 5.3:-3119135 | MS.gene22291:CDS |
| ATATTTGTGGTTGATGCCAG+TGG | 0.606523 | 5.3:-3116891 | MS.gene22291:CDS |
| TTTATCTTTGATGCTGAAGG+GGG | 0.606605 | 5.3:-3118666 | MS.gene22291:CDS |
| GTATCAATAATTCCTTTCCG+TGG | 0.607702 | 5.3:-3116287 | MS.gene22291:CDS |
| GAACTTCAGCTGAATCTCCA+CGG | 0.608553 | 5.3:+3116270 | None:intergenic |
| ATGATTGTTGCAATCACTGA+TGG | 0.614936 | 5.3:-3115735 | MS.gene22291:CDS |
| ACCTTATCAAAAGTTGCGAA+GGG | 0.620961 | 5.3:-3118066 | MS.gene22291:CDS |
| TATCAAGCCAATGCTTCCAA+AGG | 0.621959 | 5.3:-3118538 | MS.gene22291:intron |
| TCAGCTGAATCTCCACGGAA+AGG | 0.621995 | 5.3:+3116275 | None:intergenic |
| GCATACCGTGGTAAGACCAT+GGG | 0.622210 | 5.3:+3116169 | None:intergenic |
| AAGTGTTTAGCTGCTCTGGA+GGG | 0.622335 | 5.3:-3120148 | MS.gene22291:CDS |
| GGTTGATGCCAGTGGAAGCA+TGG | 0.625498 | 5.3:-3116883 | MS.gene22291:CDS |
| TGTTGTCTCGATGGCAACAA+GGG | 0.629826 | 5.3:-3114952 | MS.gene22291:CDS |
| GTGGTAAGACCATGGGCAAG+GGG | 0.630171 | 5.3:+3116176 | None:intergenic |
| ACCTTCTAGATCGATTGCAA+TGG | 0.641122 | 5.3:-3116240 | MS.gene22291:CDS |
| AGGGGTGACCCTCCACCACA+CGG | 0.649940 | 5.3:+3116194 | None:intergenic |
| AGGTTTAGGGGCATCAGTAG+CGG | 0.659828 | 5.3:+3115665 | None:intergenic |
| GAAGGATGAAATTCTTGAGG+TGG | 0.669416 | 5.3:-3115193 | MS.gene22291:intron |
| TGTCTCAACAGGTTTCGCGA+AGG | 0.673285 | 5.3:-3115112 | MS.gene22291:CDS |
| CCTTGCCCATGGTCTTACCA+CGG | 0.679671 | 5.3:-3116174 | MS.gene22291:intron |
| ATTGCAATCGATCTAGAAGG+TGG | 0.681426 | 5.3:+3116242 | None:intergenic |
| TCTTTGCCCAACAAGCACAG+AGG | 0.710858 | 5.3:-3118620 | MS.gene22291:CDS |
| TTATCAGTAACAATTGACCG+GGG | 0.718464 | 5.3:+3119118 | None:intergenic |
| CGTCTTGAAAGGCTTCCGTG+TGG | 0.726411 | 5.3:-3116209 | MS.gene22291:CDS |
| GGGACGTGAAAAGGTTTACG+CGG | 0.726630 | 5.3:-3120128 | MS.gene22291:CDS |
| TATCAGTAACAATTGACCGG+GGG | 0.732295 | 5.3:+3119119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTTAAATAAAAATTTG+AGG | - | chr5.3:3116145-3116164 | MS.gene22291:intron | 10.0% |
| !! | ATATTTAACCTTAAAATAAT+TGG | - | chr5.3:3117519-3117538 | MS.gene22291:intron | 10.0% |
| !! | ATATTTAACCTTAAAATAAT+TGG | + | chr5.3:3117538-3117519 | None:intergenic | 10.0% |
| !! | TATTTAACCTTAAAATAATT+GGG | - | chr5.3:3117520-3117539 | MS.gene22291:intron | 10.0% |
| !! | TATTTAACCTTAAAATAATT+GGG | + | chr5.3:3117539-3117520 | None:intergenic | 10.0% |
| !! | TCATTAAAAATATTAAAAAC+AGG | + | chr5.3:3119063-3119082 | None:intergenic | 10.0% |
| !!! | AAATTTATATTTTAAATGTG+TGG | + | chr5.3:3115178-3115197 | None:intergenic | 10.0% |
| !!! | AATTTATATTTTAAATGTGT+GGG | + | chr5.3:3115177-3115196 | None:intergenic | 10.0% |
| !!! | TAAATATAATTTTATTTCCT+CGG | - | chr5.3:3115388-3115407 | MS.gene22291:intron | 10.0% |
| !!! | TTTAATTTTCTAAACTTTTA+AGG | - | chr5.3:3117858-3117877 | MS.gene22291:intron | 10.0% |
| !!! | TTTGTTTCTTTATAATTTAA+CGG | - | chr5.3:3118345-3118364 | MS.gene22291:intron | 10.0% |
| !! | AAAAACATTTAATGAAATGT+AGG | + | chr5.3:3117265-3117284 | None:intergenic | 15.0% |
| !! | AAAACATTTAATGAAATGTA+GGG | - | chr5.3:3117628-3117647 | MS.gene22291:intron | 15.0% |
| !! | AAAACATTTAATGAAATGTA+GGG | + | chr5.3:3117647-3117628 | None:intergenic | 15.0% |
| !! | AAAACATTTATTGAAATGTA+AGG | - | chr5.3:3117456-3117475 | MS.gene22291:intron | 15.0% |
| !! | AGAGAATATACAAATTATAT+AGG | + | chr5.3:3116360-3116379 | None:intergenic | 15.0% |
| !! | AGATTATAAAGAAGAATTAA+AGG | + | chr5.3:3117815-3117834 | None:intergenic | 15.0% |
| !! | ATATACAAATTATATAGGTA+CGG | + | chr5.3:3116355-3116374 | None:intergenic | 15.0% |
| !! | CATTATAATATAGACAATTA+AGG | + | chr5.3:3115569-3115588 | None:intergenic | 15.0% |
| !! | TATTGATATAATTACTATTC+TGG | - | chr5.3:3118789-3118808 | MS.gene22291:intron | 15.0% |
| !! | TTAAAATCCCTAAAATAATA+AGG | + | chr5.3:3117437-3117456 | None:intergenic | 15.0% |
| !! | TTGAAATGAATGTTTATATA+CGG | - | chr5.3:3116251-3116270 | MS.gene22291:CDS | 15.0% |
| !!! | AAAAAATGTTATATTTTCAG+AGG | - | chr5.3:3116533-3116552 | MS.gene22291:intron | 15.0% |
| !!! | AAATCAAATTATGAATCTTT+TGG | + | chr5.3:3115325-3115344 | None:intergenic | 15.0% |
| !!! | AATTTTTCATCATTCAAATA+CGG | - | chr5.3:3118466-3118485 | MS.gene22291:intron | 15.0% |
| !!! | TATTCTTTGACTTAATTTAA+AGG | - | chr5.3:3115605-3115624 | MS.gene22291:intron | 15.0% |
| !!! | TTTAAGGTTAAATATGTTTT+TGG | - | chr5.3:3117379-3117398 | MS.gene22291:intron | 15.0% |
| !! | AAACATCAAATATATTTAGC+TGG | - | chr5.3:3116638-3116657 | MS.gene22291:intron | 20.0% |
| !! | AAACATTCATTTCAAAAGAT+AGG | + | chr5.3:3116246-3116265 | None:intergenic | 20.0% |
| !! | ATACATGAAATGAAAGTTAT+AGG | + | chr5.3:3119574-3119593 | None:intergenic | 20.0% |
| !! | ATCAAAGATAATTACTTAAC+AGG | + | chr5.3:3116896-3116915 | None:intergenic | 20.0% |
| !! | CAAAACATTTAATGAAATGT+AGG | - | chr5.3:3117627-3117646 | MS.gene22291:intron | 20.0% |
| !! | TAAATTTCAAAGAAAGCTTA+CGG | + | chr5.3:3115020-3115039 | None:intergenic | 20.0% |
| !! | TATAACTTTCATTTCATGTA+TGG | - | chr5.3:3119573-3119592 | MS.gene22291:intron | 20.0% |
| !! | TCAAAGATAATTACTTAACA+GGG | + | chr5.3:3116895-3116914 | None:intergenic | 20.0% |
| !! | TGTCTTGAATTCAATATAAA+TGG | + | chr5.3:3119623-3119642 | None:intergenic | 20.0% |
| !!! | AATTACTATTCTGGTTAAAT+AGG | - | chr5.3:3118798-3118817 | MS.gene22291:intron | 20.0% |
| !!! | AGAATAGTCCTTATTATTTT+AGG | - | chr5.3:3117426-3117445 | MS.gene22291:intron | 20.0% |
| !!! | ATAATTTTTTCTTGGAAGTT+TGG | - | chr5.3:3116671-3116690 | MS.gene22291:intron | 20.0% |
| !!! | GAATAGTCCTTATTATTTTA+GGG | - | chr5.3:3117427-3117446 | MS.gene22291:intron | 20.0% |
| !!! | GAGAATATTTTAGAATAGAT+AGG | + | chr5.3:3117777-3117796 | None:intergenic | 20.0% |
| !!! | GGTTTATATTTTCGTTTATT+TGG | + | chr5.3:3119553-3119572 | None:intergenic | 20.0% |
| !!! | TAGAGATAATAATTTTAGAG+TGG | + | chr5.3:3115506-3115525 | None:intergenic | 20.0% |
| !!! | TGCAGTTTATAATTTTTTCT+TGG | - | chr5.3:3116663-3116682 | MS.gene22291:intron | 20.0% |
| !!! | TTATTTTTCTGAAAATGTCT+AGG | - | chr5.3:3119299-3119318 | MS.gene22291:intron | 20.0% |
| !!! | TTTCAACAAATACTTTTCTA+CGG | + | chr5.3:3117083-3117102 | None:intergenic | 20.0% |
| !!! | TTTCTTTGAAATTTAAATGC+TGG | - | chr5.3:3115025-3115044 | MS.gene22291:intron | 20.0% |
| ! | AAAATAACCTGAATTGTTGT+AGG | - | chr5.3:3118191-3118210 | MS.gene22291:intron | 25.0% |
| ! | AAAGTGGGAAAAATAGATAT+TGG | + | chr5.3:3119670-3119689 | None:intergenic | 25.0% |
| ! | AAGTAATACAATTTCCTTTG+AGG | - | chr5.3:3119642-3119661 | MS.gene22291:intron | 25.0% |
| ! | AATTTATCTTTGATGCTGAA+GGG | - | chr5.3:3116439-3116458 | MS.gene22291:intron | 25.0% |
| ! | ACTTAAACTCTGATATGTTA+AGG | + | chr5.3:3118726-3118745 | None:intergenic | 25.0% |
| ! | AGAAGAATTAAAGGACATTA+AGG | + | chr5.3:3117806-3117825 | None:intergenic | 25.0% |
| ! | AGTATAATCAAACTTGATCT+CGG | - | chr5.3:3115770-3115789 | MS.gene22291:CDS | 25.0% |
| ! | ATAACTATTCTTTACTTCCT+TGG | - | chr5.3:3118553-3118572 | MS.gene22291:CDS | 25.0% |
| ! | ATACAAGCCAAGTAAAATAA+AGG | + | chr5.3:3118080-3118099 | None:intergenic | 25.0% |
| ! | ATATGGATGTAAAAACAGAA+TGG | + | chr5.3:3118026-3118045 | None:intergenic | 25.0% |
| ! | ATTCAGCAAAAGAAATATTG+AGG | + | chr5.3:3119272-3119291 | None:intergenic | 25.0% |
| ! | CAATACTTACTACAGAAATA+TGG | - | chr5.3:3118132-3118151 | MS.gene22291:intron | 25.0% |
| ! | CGAGCATAAATACATATAAA+GGG | + | chr5.3:3115801-3115820 | None:intergenic | 25.0% |
| ! | CTTGTTACTGAAAAATGAAT+AGG | - | chr5.3:3116288-3116307 | MS.gene22291:CDS | 25.0% |
| ! | GAAAAATGAATAGGAATGTT+CGG | - | chr5.3:3116297-3116316 | MS.gene22291:intron | 25.0% |
| ! | TAACTATTCTTTACTTCCTT+GGG | - | chr5.3:3118554-3118573 | MS.gene22291:CDS | 25.0% |
| ! | TCGAGCATAAATACATATAA+AGG | + | chr5.3:3115802-3115821 | None:intergenic | 25.0% |
| ! | TGATGCAAAATTAATTAGTC+AGG | + | chr5.3:3118053-3118072 | None:intergenic | 25.0% |
| ! | TTAACATATCAGAGTTTAAG+TGG | - | chr5.3:3118725-3118744 | MS.gene22291:intron | 25.0% |
| ! | TTAATTAGTCAGGAACAATA+TGG | + | chr5.3:3118043-3118062 | None:intergenic | 25.0% |
| ! | TTCAGCAAAAGAAATATTGA+GGG | + | chr5.3:3119271-3119290 | None:intergenic | 25.0% |
| ! | TTTAACGGTTAACAAAAATG+AGG | - | chr5.3:3118360-3118379 | MS.gene22291:intron | 25.0% |
| ! | TTTCGTTTATTTGGTTACTA+AGG | + | chr5.3:3119544-3119563 | None:intergenic | 25.0% |
| !! | TGTCGTATATTTTGTAATTC+AGG | - | chr5.3:3115949-3115968 | MS.gene22291:intron | 25.0% |
| !! | TTCATAAATTTTTCACTGCA+GGG | - | chr5.3:3120100-3120119 | MS.gene22291:intron | 25.0% |
| !! | TTTTGTAATTCAGGTAGAAT+TGG | - | chr5.3:3115958-3115977 | MS.gene22291:intron | 25.0% |
| !!! | TCAAAGACCTTTATTTTACT+TGG | - | chr5.3:3118070-3118089 | MS.gene22291:CDS | 25.0% |
| !!! | TGACCTTTTTAAAGATATGT+TGG | + | chr5.3:3119403-3119422 | None:intergenic | 25.0% |
| !!! | TTCTTAATCTCCTTTTTTGA+GGG | - | chr5.3:3119732-3119751 | MS.gene22291:intron | 25.0% |
| !!! | TTTATTTTACTTGGCTTGTA+TGG | - | chr5.3:3118079-3118098 | MS.gene22291:CDS | 25.0% |
| !!! | TTTTTAAAGATATGTTGGCT+CGG | + | chr5.3:3119398-3119417 | None:intergenic | 25.0% |
| AAAAACAGAGATACAAAGAC+TGG | - | chr5.3:3116822-3116841 | MS.gene22291:CDS | 30.0% | |
| AAAACAGAGATACAAAGACT+GGG | - | chr5.3:3116823-3116842 | MS.gene22291:CDS | 30.0% | |
| AACTACGTGATGAGTATTAT+TGG | + | chr5.3:3115883-3115902 | None:intergenic | 30.0% | |
| AACTCTGATATGTTAAGGTT+AGG | + | chr5.3:3118721-3118740 | None:intergenic | 30.0% | |
| AACTTTCATTTCATGTATGG+TGG | - | chr5.3:3119576-3119595 | MS.gene22291:intron | 30.0% | |
| AATAGATATTGGAACCTCAA+AGG | + | chr5.3:3119659-3119678 | None:intergenic | 30.0% | |
| AATATCACCTACAACAATTC+AGG | + | chr5.3:3118201-3118220 | None:intergenic | 30.0% | |
| AATGAAGGATGAAATTCTTG+AGG | - | chr5.3:3119911-3119930 | MS.gene22291:intron | 30.0% | |
| ACGACAAACAATTTATCAGA+TGG | + | chr5.3:3115935-3115954 | None:intergenic | 30.0% | |
| ACTACGTGATGAGTATTATT+GGG | + | chr5.3:3115882-3115901 | None:intergenic | 30.0% | |
| ACTTTCATTTCATGTATGGT+GGG | - | chr5.3:3119577-3119596 | MS.gene22291:intron | 30.0% | |
| AGAATAGATAGGATGAAGAT+CGG | + | chr5.3:3117766-3117785 | None:intergenic | 30.0% | |
| ATCAACTTGCATATATGTCA+CGG | - | chr5.3:3116738-3116757 | MS.gene22291:intron | 30.0% | |
| ATTATCAGTAACAATTGACC+GGG | + | chr5.3:3115993-3116012 | None:intergenic | 30.0% | |
| ATTGTTGTAGGTGATATTTG+TGG | - | chr5.3:3118203-3118222 | MS.gene22291:intron | 30.0% | |
| ATTTATCTTTGATGCTGAAG+GGG | - | chr5.3:3116440-3116459 | MS.gene22291:intron | 30.0% | |
| CACTTATTTGCAAATGACAA+TGG | - | chr5.3:3119123-3119142 | MS.gene22291:CDS | 30.0% | |
| CTAAATCTGCATAAATTCAC+AGG | - | chr5.3:3119824-3119843 | MS.gene22291:intron | 30.0% | |
| CTATTATTTGCCAAATGCTT+CGG | - | chr5.3:3120128-3120147 | MS.gene22291:CDS | 30.0% | |
| CTGTGAATTTATGCAGATTT+AGG | + | chr5.3:3119826-3119845 | None:intergenic | 30.0% | |
| GAATTTATCTTTGATGCTGA+AGG | - | chr5.3:3116438-3116457 | MS.gene22291:intron | 30.0% | |
| GATTATCAGTAACAATTGAC+CGG | + | chr5.3:3115994-3116013 | None:intergenic | 30.0% | |
| GCATCAAAGATAAATTCTTC+AGG | + | chr5.3:3116435-3116454 | None:intergenic | 30.0% | |
| GTTTAAGTGGTGATATTTGT+TGG | - | chr5.3:3118738-3118757 | MS.gene22291:intron | 30.0% | |
| TACTTGACATGGTTAATACT+CGG | + | chr5.3:3116213-3116232 | None:intergenic | 30.0% | |
| TCACAGCATCTTTGATTAAT+TGG | - | chr5.3:3115530-3115549 | MS.gene22291:intron | 30.0% | |
| TCCAACTATTGACATGTTTA+AGG | - | chr5.3:3119088-3119107 | MS.gene22291:CDS | 30.0% | |
| TCCTTAAACATGTCAATAGT+TGG | + | chr5.3:3119092-3119111 | None:intergenic | 30.0% | |
| TCTCTAACAAAATACTGATG+TGG | - | chr5.3:3117335-3117354 | MS.gene22291:intron | 30.0% | |
| TGTATATTCTCTTTCTGAAC+AGG | - | chr5.3:3116368-3116387 | MS.gene22291:intron | 30.0% | |
| TGTTGAAAAAACTGACATGA+GGG | - | chr5.3:3117095-3117114 | MS.gene22291:intron | 30.0% | |
| TTATTTGGTTACTAAGGAGA+TGG | + | chr5.3:3119538-3119557 | None:intergenic | 30.0% | |
| TTCTTCATTCTGTTCTTCAT+TGG | + | chr5.3:3116074-3116093 | None:intergenic | 30.0% | |
| TTGTTAGAGAATTAACAGCA+GGG | + | chr5.3:3117325-3117344 | None:intergenic | 30.0% | |
| TTGTTGAAAAAACTGACATG+AGG | - | chr5.3:3117094-3117113 | MS.gene22291:intron | 30.0% | |
| TTTGTTAGAGAATTAACAGC+AGG | + | chr5.3:3117326-3117345 | None:intergenic | 30.0% | |
| ! | ACAATTTTTCCCCTCAAAAA+AGG | + | chr5.3:3119745-3119764 | None:intergenic | 30.0% |
| ! | CATTGTCATTTGCAAATAAG+TGG | + | chr5.3:3119125-3119144 | None:intergenic | 30.0% |
| ! | CTTTTCTAATACAGTGATTC+TGG | + | chr5.3:3118652-3118671 | None:intergenic | 30.0% |
| ! | GAGCCAACATATCTTTAAAA+AGG | - | chr5.3:3119397-3119416 | MS.gene22291:intron | 30.0% |
| ! | GTTCATAAATTTTTCACTGC+AGG | - | chr5.3:3120099-3120118 | MS.gene22291:intron | 30.0% |
| !! | ACAGGGACTAATTTTGATAA+CGG | - | chr5.3:3117585-3117604 | MS.gene22291:intron | 30.0% |
| !! | CTAAACTTTTAAGGATGCAT+AGG | - | chr5.3:3117867-3117886 | MS.gene22291:intron | 30.0% |
| !!! | CTTCTTAATCTCCTTTTTTG+AGG | - | chr5.3:3119731-3119750 | MS.gene22291:intron | 30.0% |
| !!! | GGTTTTTTCTTTGTTCTAGA+AGG | - | chr5.3:3115626-3115645 | MS.gene22291:intron | 30.0% |
| !!! | TACTGACTCTGTTTTAATGA+AGG | - | chr5.3:3119896-3119915 | MS.gene22291:intron | 30.0% |
| !!! | TCTTAATCTCCTTTTTTGAG+GGG | - | chr5.3:3119733-3119752 | MS.gene22291:intron | 30.0% |
| !!! | TTGATACCTGTTATTTTCAG+AGG | - | chr5.3:3118587-3118606 | MS.gene22291:CDS | 30.0% |
| AAACAGAGATACAAAGACTG+GGG | - | chr5.3:3116824-3116843 | MS.gene22291:CDS | 35.0% | |
| AAACAGTAGCATCATTTAGC+GGG | + | chr5.3:3116970-3116989 | None:intergenic | 35.0% | |
| AAAGTGATCAAGACTGATGA+GGG | + | chr5.3:3117841-3117860 | None:intergenic | 35.0% | |
| AAATGATGCTACTGTTTGCA+GGG | - | chr5.3:3116973-3116992 | MS.gene22291:intron | 35.0% | |
| AATAGATAGGATGAAGATCG+GGG | + | chr5.3:3117764-3117783 | None:intergenic | 35.0% | |
| AATCAAACTTGATCTCGGTT+AGG | - | chr5.3:3115775-3115794 | MS.gene22291:CDS | 35.0% | |
| ACAAAGTAACTGTTCTCCTT+AGG | + | chr5.3:3118504-3118523 | None:intergenic | 35.0% | |
| ACCTTATCAAAAGTTGCGAA+GGG | - | chr5.3:3117041-3117060 | MS.gene22291:intron | 35.0% | |
| ACTAAGTGTTCATGGATGAT+AGG | + | chr5.3:3115134-3115153 | None:intergenic | 35.0% | |
| AGGAGATGGTTTATCTCATT+TGG | + | chr5.3:3119524-3119543 | None:intergenic | 35.0% | |
| AGTACAAGAATCACTGTGAA+TGG | - | chr5.3:3115835-3115854 | MS.gene22291:intron | 35.0% | |
| ATAGTGGTTATGTTCATAGG+AGG | + | chr5.3:3115071-3115090 | None:intergenic | 35.0% | |
| ATGATTGTTGCAATCACTGA+TGG | - | chr5.3:3119372-3119391 | MS.gene22291:intron | 35.0% | |
| ATGTAGGGACTATTCTTCAA+AGG | - | chr5.3:3117643-3117662 | MS.gene22291:intron | 35.0% | |
| ATTAACCATGTCAAGTACAG+TGG | - | chr5.3:3116216-3116235 | MS.gene22291:CDS | 35.0% | |
| CAAACAGTAGCATCATTTAG+CGG | + | chr5.3:3116971-3116990 | None:intergenic | 35.0% | |
| CAAATTATATAGGTACGGTG+AGG | + | chr5.3:3116350-3116369 | None:intergenic | 35.0% | |
| CCCTGTTGTTAATTCTCTAA+CGG | + | chr5.3:3117571-3117590 | None:intergenic | 35.0% | |
| CCGTTAGAGAATTAACAACA+GGG | - | chr5.3:3117568-3117587 | MS.gene22291:intron | 35.0% | |
| CTTATACGAAACCCAAATAG+TGG | + | chr5.3:3118419-3118438 | None:intergenic | 35.0% | |
| GAAAACAAGTTTGTCTCAAC+AGG | - | chr5.3:3119984-3120003 | MS.gene22291:intron | 35.0% | |
| GAATAGATAGGATGAAGATC+GGG | + | chr5.3:3117765-3117784 | None:intergenic | 35.0% | |
| GAATGAAGAAGAAGACAAAG+AGG | - | chr5.3:3116084-3116103 | MS.gene22291:intron | 35.0% | |
| GCTGGGAAGATATATAAATC+AGG | - | chr5.3:3119936-3119955 | MS.gene22291:intron | 35.0% | |
| GGATTAAATGCAGAGAAAAG+TGG | - | chr5.3:3119333-3119352 | MS.gene22291:intron | 35.0% | |
| GTAGTCGTATAACAAACGAA+TGG | + | chr5.3:3116606-3116625 | None:intergenic | 35.0% | |
| GTATCAATAATTCCTTTCCG+TGG | - | chr5.3:3118820-3118839 | MS.gene22291:intron | 35.0% | |
| TAAAGTGATCAAGACTGATG+AGG | + | chr5.3:3117842-3117861 | None:intergenic | 35.0% | |
| TAAATGATGCTACTGTTTGC+AGG | - | chr5.3:3116972-3116991 | MS.gene22291:intron | 35.0% | |
| TATAAACTGCTTGAGTTCTC+AGG | + | chr5.3:3118529-3118548 | None:intergenic | 35.0% | |
| TATAACAAACGAATGGTGTG+AGG | + | chr5.3:3116599-3116618 | None:intergenic | 35.0% | |
| TATCATCCATGAACACTTAG+TGG | - | chr5.3:3115133-3115152 | MS.gene22291:CDS | 35.0% | |
| TATTGACCACTAAGTGTTCA+TGG | + | chr5.3:3115142-3115161 | None:intergenic | 35.0% | |
| TCAAAGTCACGCAAAATGTA+GGG | - | chr5.3:3117487-3117506 | MS.gene22291:intron | 35.0% | |
| TCAAAGTCACGCAAATTGTA+GGG | + | chr5.3:3117406-3117425 | None:intergenic | 35.0% | |
| TCAACTGCTAATCTCTTTAC+AGG | + | chr5.3:3117000-3117019 | None:intergenic | 35.0% | |
| TCCGTTAGAGAATTAACAAC+AGG | - | chr5.3:3117567-3117586 | MS.gene22291:intron | 35.0% | |
| TCGGGACTAAAAACAATTAG+TGG | + | chr5.3:3115252-3115271 | None:intergenic | 35.0% | |
| TCTGTTCTTCATTGGATTCT+TGG | + | chr5.3:3116066-3116085 | None:intergenic | 35.0% | |
| TGAAAATGTCTAGGCTGTTA+GGG | - | chr5.3:3119308-3119327 | MS.gene22291:intron | 35.0% | |
| TGTAGGGACTATTCTTCAAA+GGG | - | chr5.3:3117644-3117663 | MS.gene22291:intron | 35.0% | |
| TTAACCATGTCAAGTACAGT+GGG | - | chr5.3:3116217-3116236 | MS.gene22291:CDS | 35.0% | |
| TTATCAGTAACAATTGACCG+GGG | + | chr5.3:3115992-3116011 | None:intergenic | 35.0% | |
| TTCAAACTATTGACGCATAG+TGG | + | chr5.3:3115087-3115106 | None:intergenic | 35.0% | |
| TTCAAAGTCACGCAAAATGT+AGG | - | chr5.3:3117486-3117505 | MS.gene22291:intron | 35.0% | |
| TTCAAAGTCACGCAAATTGT+AGG | + | chr5.3:3117407-3117426 | None:intergenic | 35.0% | |
| TTGCTTTCTACATTTGACCT+CGG | + | chr5.3:3119028-3119047 | None:intergenic | 35.0% | |
| TTTATCTTTGATGCTGAAGG+GGG | - | chr5.3:3116441-3116460 | MS.gene22291:intron | 35.0% | |
| ! | AAGTCTTGTGATGTAGGTTT+AGG | + | chr5.3:3119459-3119478 | None:intergenic | 35.0% |
| ! | AGTCTTGTGATGTAGGTTTA+GGG | + | chr5.3:3119458-3119477 | None:intergenic | 35.0% |
| ! | ATTTTAAATGTGTGGGACAC+AGG | + | chr5.3:3115170-3115189 | None:intergenic | 35.0% |
| ! | CTGTAACCTCTGAAAATAAC+AGG | + | chr5.3:3118596-3118615 | None:intergenic | 35.0% |
| ! | GTCAATAGTTTGAAGTATGG+AGG | - | chr5.3:3115093-3115112 | MS.gene22291:CDS | 35.0% |
| ! | GTTATATTTTCAGAGGACAG+AGG | - | chr5.3:3116540-3116559 | MS.gene22291:intron | 35.0% |
| ! | TAAGTATTGTCAGAGCAAAC+TGG | + | chr5.3:3118121-3118140 | None:intergenic | 35.0% |
| ! | TCTTTTGGATGCATAACTCA+AGG | + | chr5.3:3115310-3115329 | None:intergenic | 35.0% |
| ! | TGCGTCAATAGTTTGAAGTA+TGG | - | chr5.3:3115090-3115109 | MS.gene22291:intron | 35.0% |
| ! | TGTTTTCAGTGTCAATGACA+AGG | + | chr5.3:3119971-3119990 | None:intergenic | 35.0% |
| ! | TTCAAAGGGCGTAAAATGTA+AGG | - | chr5.3:3117658-3117677 | MS.gene22291:intron | 35.0% |
| ! | TTTCACCCTTCCTTTTTAAC+AGG | + | chr5.3:3115278-3115297 | None:intergenic | 35.0% |
| !! | AATACAGTGATTCTGGTTCA+AGG | + | chr5.3:3118645-3118664 | None:intergenic | 35.0% |
| !! | AGTGGGTCCCAATTATTTTA+AGG | - | chr5.3:3117363-3117382 | MS.gene22291:intron | 35.0% |
| !! | AGTGGGTCCCAATTATTTTA+AGG | + | chr5.3:3117382-3117363 | None:intergenic | 35.0% |
| !! | GAAGCATTGGCTTGATATAT+CGG | + | chr5.3:3116566-3116585 | None:intergenic | 35.0% |
| !! | GATAACGGAGATAAAATGTG+AGG | + | chr5.3:3117293-3117312 | None:intergenic | 35.0% |
| !! | GCAGGGACTAATTTTGATAA+CGG | + | chr5.3:3117308-3117327 | None:intergenic | 35.0% |
| !! | TATGGTGGGTAGCTATTTAT+GGG | - | chr5.3:3119591-3119610 | MS.gene22291:intron | 35.0% |
| !! | TCTATTTTTCCCACTTTGAG+AGG | - | chr5.3:3119673-3119692 | MS.gene22291:intron | 35.0% |
| !! | TGAAGTATAGGGTTTTATCC+TGG | - | chr5.3:3115661-3115680 | MS.gene22291:CDS | 35.0% |
| !! | TTAACAGGGCATTGTAAAAG+TGG | + | chr5.3:3116881-3116900 | None:intergenic | 35.0% |
| !!! | GAAAGCTTACGGCTTTTTTA+AGG | + | chr5.3:3115009-3115028 | None:intergenic | 35.0% |
| !!! | TCATTGGATTCTTGGTTTTG+TGG | + | chr5.3:3116058-3116077 | None:intergenic | 35.0% |
| AACAAACACAAGTTCTACCG+AGG | - | chr5.3:3119008-3119027 | MS.gene22291:CDS | 40.0% | |
| AACAGAGATACAAAGACTGG+GGG | - | chr5.3:3116825-3116844 | MS.gene22291:CDS | 40.0% | |
| AACAGGATGCAGAATGCAAA+AGG | - | chr5.3:3118252-3118271 | MS.gene22291:intron | 40.0% | |
| AACAGTAGCATCATTTAGCG+GGG | + | chr5.3:3116969-3116988 | None:intergenic | 40.0% | |
| AACTCAAAGCAGTAGAGAGA+TGG | - | chr5.3:3119151-3119170 | MS.gene22291:intron | 40.0% | |
| AAGTAACTGTTCTCCTTAGG+TGG | + | chr5.3:3118501-3118520 | None:intergenic | 40.0% | |
| AAGTTATACAAGCAGGGATC+AGG | - | chr5.3:3118299-3118318 | MS.gene22291:intron | 40.0% | |
| AATACTGATGTGGCAGTTAG+TGG | - | chr5.3:3117345-3117364 | MS.gene22291:intron | 40.0% | |
| ACATATGCCCATCCACTATT+TGG | - | chr5.3:3118404-3118423 | MS.gene22291:intron | 40.0% | |
| ACCTACATCACAAGACTTGA+AGG | - | chr5.3:3119461-3119480 | MS.gene22291:intron | 40.0% | |
| ACCTTCTAGATCGATTGCAA+TGG | - | chr5.3:3118867-3118886 | MS.gene22291:intron | 40.0% | |
| AGACTGAGATGCTGAAGTAT+AGG | - | chr5.3:3115649-3115668 | MS.gene22291:CDS | 40.0% | |
| AGTAACTGTTCTCCTTAGGT+GGG | + | chr5.3:3118500-3118519 | None:intergenic | 40.0% | |
| ATACTGATGTGGCAGTTAGT+GGG | - | chr5.3:3117346-3117365 | MS.gene22291:intron | 40.0% | |
| ATAGAGGTAGAGCTAAAACC+AGG | + | chr5.3:3115682-3115701 | None:intergenic | 40.0% | |
| ATGAAATTCTTGAGGTGGCT+GGG | - | chr5.3:3119919-3119938 | MS.gene22291:intron | 40.0% | |
| ATTATATAGGTACGGTGAGG+TGG | + | chr5.3:3116347-3116366 | None:intergenic | 40.0% | |
| ATTGCAATCGATCTAGAAGG+TGG | + | chr5.3:3118868-3118887 | None:intergenic | 40.0% | |
| CAAAGAGGAAGAAGAAGAAG+AGG | - | chr5.3:3116099-3116118 | MS.gene22291:intron | 40.0% | |
| CACCTTATCAAAAGTTGCGA+AGG | - | chr5.3:3117040-3117059 | MS.gene22291:intron | 40.0% | |
| CATATGCCCATCCACTATTT+GGG | - | chr5.3:3118405-3118424 | MS.gene22291:intron | 40.0% | |
| CATCACAAGACTTGAAGGTA+CGG | - | chr5.3:3119466-3119485 | MS.gene22291:intron | 40.0% | |
| CGCATAGTGGTTATGTTCAT+AGG | + | chr5.3:3115074-3115093 | None:intergenic | 40.0% | |
| CTGAAAATGTCTAGGCTGTT+AGG | - | chr5.3:3119307-3119326 | MS.gene22291:intron | 40.0% | |
| GAAGGATGAAATTCTTGAGG+TGG | - | chr5.3:3119914-3119933 | MS.gene22291:intron | 40.0% | |
| GACAGCCTGTTAAAAAGGAA+GGG | - | chr5.3:3115270-3115289 | MS.gene22291:intron | 40.0% | |
| GACTGAGATGCTGAAGTATA+GGG | - | chr5.3:3115650-3115669 | MS.gene22291:CDS | 40.0% | |
| GGCAGAAAGTTATACAAGCA+GGG | - | chr5.3:3118293-3118312 | MS.gene22291:intron | 40.0% | |
| GTAGGGACTATTCTTCAAAG+AGG | + | chr5.3:3117664-3117645 | None:intergenic | 40.0% | |
| GTCTTGTGATGTAGGTTTAG+GGG | + | chr5.3:3119457-3119476 | None:intergenic | 40.0% | |
| GTGTTCATGGATGATAGGAA+AGG | + | chr5.3:3115129-3115148 | None:intergenic | 40.0% | |
| GTTGACAAACCTCTCAAAGT+GGG | + | chr5.3:3119685-3119704 | None:intergenic | 40.0% | |
| TAGTTCAGACTGACAGAAGT+TGG | + | chr5.3:3119874-3119893 | None:intergenic | 40.0% | |
| TATCAAGCCAATGCTTCCAA+AGG | - | chr5.3:3116569-3116588 | MS.gene22291:intron | 40.0% | |
| TATCAGTAACAATTGACCGG+GGG | + | chr5.3:3115991-3116010 | None:intergenic | 40.0% | |
| TCACAAAGCTCGAAAACAGA+AGG | + | chr5.3:3115414-3115433 | None:intergenic | 40.0% | |
| TCTTTCTGAACAGGATGACA+AGG | - | chr5.3:3116377-3116396 | MS.gene22291:intron | 40.0% | |
| TGGCAGAAAGTTATACAAGC+AGG | - | chr5.3:3118292-3118311 | MS.gene22291:intron | 40.0% | |
| TGTTGACAAACCTCTCAAAG+TGG | + | chr5.3:3119686-3119705 | None:intergenic | 40.0% | |
| ! | AATGATGATGTGGCAGTTAG+TGG | + | chr5.3:3117548-3117567 | None:intergenic | 40.0% |
| ! | ACCTTCAAGTCTTGTGATGT+AGG | + | chr5.3:3119465-3119484 | None:intergenic | 40.0% |
| ! | ATATTTGTGGTTGATGCCAG+TGG | - | chr5.3:3118216-3118235 | MS.gene22291:intron | 40.0% |
| ! | ATGATGATGTGGCAGTTAGT+GGG | + | chr5.3:3117547-3117566 | None:intergenic | 40.0% |
| ! | CTTCCTTTTTAACAGGCTGT+CGG | + | chr5.3:3115271-3115290 | None:intergenic | 40.0% |
| ! | TACGAAACCCAAATAGTGGA+TGG | + | chr5.3:3118415-3118434 | None:intergenic | 40.0% |
| ! | TCAAAGAGGCGCAAAATGTA+AGG | + | chr5.3:3117233-3117252 | None:intergenic | 40.0% |
| ! | TCCCTTCGCAACTTTTGATA+AGG | + | chr5.3:3117045-3117064 | None:intergenic | 40.0% |
| ! | TCTCTAACGGAATGATGATG+TGG | + | chr5.3:3117558-3117577 | None:intergenic | 40.0% |
| ! | TTCCTTTTTAACAGGCTGTC+GGG | + | chr5.3:3115270-3115289 | None:intergenic | 40.0% |
| ! | TTTCTTGGAAGTTTGGTGAG+CGG | - | chr5.3:3116678-3116697 | MS.gene22291:intron | 40.0% |
| !! | ACGAAACCCAAATAGTGGAT+GGG | + | chr5.3:3118414-3118433 | None:intergenic | 40.0% |
| !! | GTATGGTGGGTAGCTATTTA+TGG | - | chr5.3:3119590-3119609 | MS.gene22291:intron | 40.0% |
| !!! | TTGGATTCTTGGTTTTGTGG+AGG | + | chr5.3:3116055-3116074 | None:intergenic | 40.0% |
| AAGAGAATGGCACGTAAAGC+AGG | - | chr5.3:3117120-3117139 | MS.gene22291:intron | 45.0% | |
| AATGTCTAGGCTGTTAGGGT+TGG | - | chr5.3:3119312-3119331 | MS.gene22291:intron | 45.0% | |
| ACAGAGATACAAAGACTGGG+GGG | - | chr5.3:3116826-3116845 | MS.gene22291:CDS | 45.0% | |
| ACAGTAGCATCATTTAGCGG+GGG | + | chr5.3:3116968-3116987 | None:intergenic | 45.0% | |
| ACGGCATATATACCCACCTA+AGG | - | chr5.3:3118485-3118504 | MS.gene22291:intron | 45.0% | |
| AGAGGAAGAAGAAGAAGAGG+AGG | - | chr5.3:3116102-3116121 | MS.gene22291:intron | 45.0% | |
| CATGGATGATAGGAAAGGCA+TGG | + | chr5.3:3115124-3115143 | None:intergenic | 45.0% | |
| CGACAGCCTGTTAAAAAGGA+AGG | - | chr5.3:3115269-3115288 | MS.gene22291:intron | 45.0% | |
| CTAGATCGATTGCAATGGCT+AGG | - | chr5.3:3118872-3118891 | MS.gene22291:intron | 45.0% | |
| GAAACCCACTGTACTTGACA+TGG | + | chr5.3:3116224-3116243 | None:intergenic | 45.0% | |
| GAACTTCAGCTGAATCTCCA+CGG | + | chr5.3:3118840-3118859 | None:intergenic | 45.0% | |
| GAGATTGCTAGAGTTGCTCA+AGG | - | chr5.3:3120017-3120036 | MS.gene22291:intron | 45.0% | |
| GATGAAATTCTTGAGGTGGC+TGG | - | chr5.3:3119918-3119937 | MS.gene22291:intron | 45.0% | |
| GCCATTGCAATCGATCTAGA+AGG | + | chr5.3:3118871-3118890 | None:intergenic | 45.0% | |
| GGATGACAAGGATGAAGAGA+AGG | - | chr5.3:3116389-3116408 | MS.gene22291:intron | 45.0% | |
| TAAGTGTTTAGCTGCTCTGG+AGG | - | chr5.3:3114958-3114977 | MS.gene22291:CDS | 45.0% | |
| TAGAATTGGTCATTCTCCCC+CGG | - | chr5.3:3115972-3115991 | MS.gene22291:intron | 45.0% | |
| TCTTTACTTCCTTGGGTGTG+CGG | - | chr5.3:3118561-3118580 | MS.gene22291:CDS | 45.0% | |
| TGAAGATCGGGGAAGATTAG+AGG | + | chr5.3:3117753-3117772 | None:intergenic | 45.0% | |
| TGACATGAGGGCAAAGAGAA+TGG | - | chr5.3:3117107-3117126 | MS.gene22291:intron | 45.0% | |
| TGCTAAAGATCTGCATACCG+TGG | + | chr5.3:3118953-3118972 | None:intergenic | 45.0% | |
| TGCTAAGTGTTTAGCTGCTC+TGG | - | chr5.3:3114955-3114974 | MS.gene22291:CDS | 45.0% | |
| TGGCTAGGAAACGTCTTGAA+AGG | - | chr5.3:3118887-3118906 | MS.gene22291:intron | 45.0% | |
| TGTTGTCTCGATGGCAACAA+GGG | - | chr5.3:3120155-3120174 | MS.gene22291:CDS | 45.0% | |
| ! | AAGTGTTTAGCTGCTCTGGA+GGG | - | chr5.3:3114959-3114978 | MS.gene22291:CDS | 45.0% |
| ! | ACAACAGCATCCGAAGCATT+TGG | + | chr5.3:3120141-3120160 | None:intergenic | 45.0% |
| ! | ATAAGGTGCAGCAGCTCTAA+GGG | + | chr5.3:3117028-3117047 | None:intergenic | 45.0% |
| !! | AATGGTGTGAGGAGTACCTT+TGG | + | chr5.3:3116588-3116607 | None:intergenic | 45.0% |
| !! | AGGAGTACCTTTGGAAGCAT+TGG | + | chr5.3:3116579-3116598 | None:intergenic | 45.0% |
| !! | TGCTGGCTCTACTGTTCTTA+TGG | - | chr5.3:3115042-3115061 | MS.gene22291:intron | 45.0% |
| !!! | GATTCTTGGTTTTGTGGAGG+CGG | + | chr5.3:3116052-3116071 | None:intergenic | 45.0% |
| !! | AATTAATTATAATAAGAATA+AGG | - | chr5.3:3117189-3117208 | MS.gene22291:intron | 5.0% |
| !! | ATTAATTATAATAAGAATAA+GGG | - | chr5.3:3117190-3117209 | MS.gene22291:intron | 5.0% |
| !! | TATTATTATTATTATTCTTA+GGG | + | chr5.3:3117701-3117720 | None:intergenic | 5.0% |
| !! | TATTCAAAAAAAAAAAATTA+AGG | + | chr5.3:3119778-3119797 | None:intergenic | 5.0% |
| !! | TTATTATTATTATTATTCTT+AGG | + | chr5.3:3117702-3117721 | None:intergenic | 5.0% |
| AGGTGCAGCACTTAAGCTTC+TGG | - | chr5.3:3118272-3118291 | MS.gene22291:intron | 50.0% | |
| CAGAGATACAAAGACTGGGG+GGG | - | chr5.3:3116827-3116846 | MS.gene22291:CDS | 50.0% | |
| CTGTTGTCTCGATGGCAACA+AGG | - | chr5.3:3120154-3120173 | MS.gene22291:CDS | 50.0% | |
| GATAAGGTGCAGCAGCTCTA+AGG | + | chr5.3:3117029-3117048 | None:intergenic | 50.0% | |
| GCACGCAGAGAGATACATAG+AGG | + | chr5.3:3115698-3115717 | None:intergenic | 50.0% | |
| GCAGAGAAAAGTGGCGATGT+TGG | - | chr5.3:3119342-3119361 | MS.gene22291:intron | 50.0% | |
| GCATACCGTGGTAAGACCAT+GGG | + | chr5.3:3118941-3118960 | None:intergenic | 50.0% | |
| GGGACGTGAAAAGGTTTACG+CGG | - | chr5.3:3114979-3114998 | MS.gene22291:CDS | 50.0% | |
| GTCCCGACAGCCTGTTAAAA+AGG | - | chr5.3:3115265-3115284 | MS.gene22291:intron | 50.0% | |
| GTTCAATGCCATGCTTCCAC+TGG | + | chr5.3:3118235-3118254 | None:intergenic | 50.0% | |
| TATCAACTTCCGCACACCCA+AGG | + | chr5.3:3118573-3118592 | None:intergenic | 50.0% | |
| TCAGCTGAATCTCCACGGAA+AGG | + | chr5.3:3118835-3118854 | None:intergenic | 50.0% | |
| TCTTTGCCCAACAAGCACAG+AGG | - | chr5.3:3116487-3116506 | MS.gene22291:intron | 50.0% | |
| TGCATACCGTGGTAAGACCA+TGG | + | chr5.3:3118942-3118961 | None:intergenic | 50.0% | |
| TGGGGGGGACATATATGTCA+CGG | - | chr5.3:3116842-3116861 | MS.gene22291:CDS | 50.0% | |
| TGTCTCAACAGGTTTCGCGA+AGG | - | chr5.3:3119995-3120014 | MS.gene22291:intron | 50.0% | |
| TTCGGATGCTGTTGTCTCGA+TGG | - | chr5.3:3120146-3120165 | MS.gene22291:CDS | 50.0% | |
| ! | AAGTTTGGTGAGCGGCAATC+GGG | - | chr5.3:3116686-3116705 | MS.gene22291:intron | 50.0% |
| ! | GAAGTTTGGTGAGCGGCAAT+CGG | - | chr5.3:3116685-3116704 | MS.gene22291:intron | 50.0% |
| ! | GTGGAAGCATGGCATTGAAC+AGG | - | chr5.3:3118235-3118254 | MS.gene22291:intron | 50.0% |
| !! | AGGTTTAGGGGCATCAGTAG+CGG | + | chr5.3:3119445-3119464 | None:intergenic | 50.0% |
| !! | GGCTGATTTTGTTGCTCAGG+TGG | + | chr5.3:3116016-3116035 | None:intergenic | 50.0% |
| AGCTCGAAAACAGAAGGCCG+AGG | + | chr5.3:3115408-3115427 | None:intergenic | 55.0% | |
| CGTCTTGAAAGGCTTCCGTG+TGG | - | chr5.3:3118898-3118917 | MS.gene22291:intron | 55.0% | |
| CGTGGTAAGACCATGGGCAA+GGG | + | chr5.3:3118935-3118954 | None:intergenic | 55.0% | |
| CTTGAAAGGCTTCCGTGTGG+TGG | - | chr5.3:3118901-3118920 | MS.gene22291:intron | 55.0% | |
| CTTTGATGCTGAAGGGGGCT+TGG | - | chr5.3:3116446-3116465 | MS.gene22291:intron | 55.0% | |
| GTGGTAAGACCATGGGCAAG+GGG | + | chr5.3:3118934-3118953 | None:intergenic | 55.0% | |
| ! | AAAGGCTTCCGTGTGGTGGA+GGG | - | chr5.3:3118905-3118924 | MS.gene22291:intron | 55.0% |
| ! | CCTTGCCCATGGTCTTACCA+CGG | - | chr5.3:3118933-3118952 | MS.gene22291:intron | 55.0% |
| ! | GGCACGTAAAGCAGGAGCAT+TGG | - | chr5.3:3117128-3117147 | MS.gene22291:intron | 55.0% |
| ! | GGTTGATGCCAGTGGAAGCA+TGG | - | chr5.3:3118224-3118243 | MS.gene22291:intron | 55.0% |
| !! | GGCGGCTGATTTTGTTGCTC+AGG | + | chr5.3:3116019-3116038 | None:intergenic | 55.0% |
| !! | TGCTCTGGAGGGACGTGAAA+AGG | - | chr5.3:3114970-3114989 | MS.gene22291:CDS | 55.0% |
| !!! | TCTTGGTTTTGTGGAGGCGG+TGG | + | chr5.3:3116049-3116068 | None:intergenic | 55.0% |
| ACGGCGCCTCTGTGCTTGTT+GGG | + | chr5.3:3116496-3116515 | None:intergenic | 60.0% | |
| CCGTGGTAAGACCATGGGCA+AGG | + | chr5.3:3118936-3118955 | None:intergenic | 60.0% | |
| GAAAGGCTTCCGTGTGGTGG+AGG | - | chr5.3:3118904-3118923 | MS.gene22291:intron | 60.0% | |
| TCAGTAGCGGCAGCAGCTTC+AGG | + | chr5.3:3119432-3119451 | None:intergenic | 60.0% | |
| TGATGCTGAAGGGGGCTTGG+TGG | - | chr5.3:3116449-3116468 | MS.gene22291:intron | 60.0% | |
| TTGCCCTTCCAGCCTTCCCA+CGG | + | chr5.3:3116515-3116534 | None:intergenic | 60.0% | |
| ! | TTTTGTGGAGGCGGTGGAGG+CGG | + | chr5.3:3116043-3116062 | None:intergenic | 60.0% |
| !! | AACAAGCACAGAGGCGCCGT+GGG | - | chr5.3:3116496-3116515 | MS.gene22291:intron | 60.0% |
| !!! | TGGTTTTGTGGAGGCGGTGG+AGG | + | chr5.3:3116046-3116065 | None:intergenic | 60.0% |
| AGGGGTGACCCTCCACCACA+CGG | + | chr5.3:3118916-3118935 | None:intergenic | 65.0% | |
| CACGGCGCCTCTGTGCTTGT+TGG | + | chr5.3:3116497-3116516 | None:intergenic | 65.0% | |
| !! | CAACAAGCACAGAGGCGCCG+TGG | - | chr5.3:3116495-3116514 | MS.gene22291:intron | 65.0% |
| GCGCCGTGGGAAGGCTGGAA+GGG | - | chr5.3:3116509-3116528 | MS.gene22291:intron | 70.0% | |
| GGAGGGTCACCCCTTGCCCA+TGG | - | chr5.3:3118922-3118941 | MS.gene22291:intron | 70.0% | |
| !! | AGCACAGAGGCGCCGTGGGA+AGG | - | chr5.3:3116500-3116519 | MS.gene22291:intron | 70.0% |
| GGCGCCGTGGGAAGGCTGGA+AGG | - | chr5.3:3116508-3116527 | MS.gene22291:intron | 75.0% | |
| TGTGGAGGCGGTGGAGGCGG+AGG | + | chr5.3:3116040-3116059 | None:intergenic | 75.0% | |
| !! | CAGAGGCGCCGTGGGAAGGC+TGG | - | chr5.3:3116504-3116523 | MS.gene22291:intron | 75.0% |
| ! | GGAGGCGGTGGAGGCGGAGG+CGG | + | chr5.3:3116037-3116056 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3114923 | 3120206 | 3114923 | ID=MS.gene22291 |
| chr5.3 | mRNA | 3114923 | 3120206 | 3114923 | ID=MS.gene22291.t1;Parent=MS.gene22291 |
| chr5.3 | exon | 3120111 | 3120206 | 3120111 | ID=MS.gene22291.t1.exon1;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3120111 | 3120206 | 3120111 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3119006 | 3119158 | 3119006 | ID=MS.gene22291.t1.exon2;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3119006 | 3119158 | 3119006 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3118539 | 3118739 | 3118539 | ID=MS.gene22291.t1.exon3;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3118539 | 3118739 | 3118539 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3117980 | 3118135 | 3117980 | ID=MS.gene22291.t1.exon4;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3117980 | 3118135 | 3117980 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3116809 | 3116916 | 3116809 | ID=MS.gene22291.t1.exon5;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3116809 | 3116916 | 3116809 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3116175 | 3116309 | 3116175 | ID=MS.gene22291.t1.exon6;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3116175 | 3116309 | 3116175 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3115647 | 3115808 | 3115647 | ID=MS.gene22291.t1.exon7;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3115647 | 3115808 | 3115647 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3115091 | 3115211 | 3115091 | ID=MS.gene22291.t1.exon8;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3115091 | 3115211 | 3115091 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| chr5.3 | exon | 3114923 | 3115008 | 3114923 | ID=MS.gene22291.t1.exon9;Parent=MS.gene22291.t1 |
| chr5.3 | CDS | 3114923 | 3115008 | 3114923 | ID=cds.MS.gene22291.t1;Parent=MS.gene22291.t1 |
| Gene Sequence |
| Protein sequence |
