Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23332.t1 | XP_003607016.2 | 94.2 | 484 | 22 | 4 | 1 | 480 | 1 | 482 | 1.90E-258 | 901.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23332.t1 | Q8L794 | 72.1 | 423 | 118 | 0 | 56 | 478 | 53 | 475 | 2.9e-183 | 642.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23332.t1 | G7JIN0 | 94.2 | 484 | 22 | 4 | 1 | 480 | 1 | 482 | 1.3e-258 | 901.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene23332 | 0.823212 | 1.56E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene23332 | 0.872657 | 2.69E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene23332 | 0.839702 | 1.35E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene23332 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene23332 | 0.826459 | 2.68E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene23332 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene23332 | 0.819841 | 9.40E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene23332 | 0.844352 | 7.97E-59 | -1.69E-46 |
| MS.gene049491 | MS.gene23332 | 0.806127 | 9.57E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene23332 | 0.835872 | 1.30E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene23332 | 0.854205 | 1.44E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene23332 | 0.810589 | 1.07E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene23332 | 0.838783 | 2.34E-57 | -1.69E-46 |
| MS.gene049828 | MS.gene23332 | 0.815921 | 7.22E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene23332 | 0.846268 | 2.42E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene23332 | 0.846614 | 1.94E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene23332 | 0.834511 | 2.87E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene23332 | 0.822852 | 1.90E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene23332 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene23332 | 0.858567 | 7.54E-63 | -1.69E-46 |
| MS.gene050444 | MS.gene23332 | 0.809685 | 1.67E-50 | -1.69E-46 |
| MS.gene050475 | MS.gene23332 | -0.805407 | 1.36E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene23332 | 0.803282 | 3.76E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene23332 | 0.821488 | 3.93E-53 | -1.69E-46 |
| MS.gene050541 | MS.gene23332 | -0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene23332 | 0.820722 | 5.90E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene23332 | 0.811706 | 6.12E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene23332 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene050686 | MS.gene23332 | 0.806366 | 8.52E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene23332 | 0.808849 | 2.53E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene23332 | 0.805252 | 1.46E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene23332 | 0.850186 | 2.00E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene23332 | 0.852194 | 5.42E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene23332 | 0.852444 | 4.60E-61 | -1.69E-46 |
| MS.gene050950 | MS.gene23332 | 0.808435 | 3.10E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene23332 | 0.818619 | 1.78E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene23332 | 0.82305 | 1.71E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene23332 | 0.844176 | 8.89E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene23332 | 0.86514 | 7.33E-65 | -1.69E-46 |
| MS.gene051255 | MS.gene23332 | 0.813167 | 2.94E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene23332 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene051434 | MS.gene23332 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene23332 | 0.834877 | 2.33E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene23332 | 0.83238 | 9.77E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene23332 | 0.825069 | 5.73E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene23332 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene23332 | 0.877909 | 4.31E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene23332 | 0.87678 | 1.06E-68 | -1.69E-46 |
| MS.gene051949 | MS.gene23332 | 0.826601 | 2.48E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene23332 | 0.816452 | 5.49E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene23332 | 0.875239 | 3.60E-68 | -1.69E-46 |
| MS.gene052290 | MS.gene23332 | 0.866582 | 2.57E-65 | -1.69E-46 |
| MS.gene052310 | MS.gene23332 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene23332 | 0.811544 | 6.64E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene23332 | 0.895682 | 7.60E-76 | -1.69E-46 |
| MS.gene052421 | MS.gene23332 | 0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene23332 | 0.862615 | 4.47E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene23332 | 0.81662 | 5.03E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene23332 | 0.851062 | 1.13E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene23332 | 0.862711 | 4.18E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene23332 | 0.856504 | 3.08E-62 | -1.69E-46 |
| MS.gene053009 | MS.gene23332 | 0.84632 | 2.34E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene23332 | 0.836765 | 7.72E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene23332 | 0.855083 | 8.00E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene23332 | 0.857188 | 1.94E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene23332 | 0.852409 | 4.70E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene23332 | 0.849424 | 3.26E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene23332 | 0.837127 | 6.24E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene23332 | 0.881313 | 2.66E-70 | -1.69E-46 |
| MS.gene053384 | MS.gene23332 | 0.82811 | 1.08E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene23332 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene23332 | 0.816722 | 4.78E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene23332 | 0.856978 | 2.23E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene23332 | 0.812284 | 4.58E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene23332 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene053915 | MS.gene23332 | 0.814922 | 1.20E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene23332 | 0.809287 | 2.04E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene23332 | 0.82645 | 2.69E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene23332 | 0.844788 | 6.09E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene23332 | 0.856924 | 2.31E-62 | -1.69E-46 |
| MS.gene054802 | MS.gene23332 | 0.829362 | 5.37E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene23332 | 0.827802 | 1.28E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene23332 | 0.832371 | 9.82E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene23332 | 0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene23332 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene23332 | 0.855691 | 5.32E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene23332 | 0.874775 | 5.19E-68 | -1.69E-46 |
| MS.gene055212 | MS.gene23332 | 0.8253 | 5.05E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene23332 | 0.840165 | 1.02E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene23332 | 0.829468 | 5.06E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene23332 | 0.811213 | 7.83E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene23332 | 0.813145 | 2.97E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene23332 | 0.865877 | 4.29E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene23332 | 0.831039 | 2.09E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene23332 | 0.874699 | 5.51E-68 | -1.69E-46 |
| MS.gene055502 | MS.gene23332 | 0.83695 | 6.93E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene23332 | 0.816684 | 4.87E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene23332 | 0.824198 | 9.19E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene23332 | 0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene23332 | 0.846152 | 2.60E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene23332 | 0.863447 | 2.47E-64 | -1.69E-46 |
| MS.gene05592 | MS.gene23332 | 0.878171 | 3.48E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene23332 | 0.848463 | 6.03E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene23332 | 0.823905 | 1.08E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene23332 | 0.807701 | 4.45E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene23332 | 0.838017 | 3.69E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene23332 | 0.838914 | 2.17E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene23332 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene23332 | 0.81566 | 8.25E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene23332 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene23332 | 0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene23332 | 0.804737 | 1.87E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene23332 | 0.879951 | 8.19E-70 | -1.69E-46 |
| MS.gene056611 | MS.gene23332 | 0.824926 | 6.20E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene23332 | 0.846193 | 2.53E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene23332 | 0.824143 | 9.47E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene23332 | 0.847576 | 1.06E-59 | -1.69E-46 |
| MS.gene056903 | MS.gene23332 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene23332 | 0.812379 | 4.37E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene23332 | 0.83131 | 1.79E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene23332 | 0.84136 | 4.98E-58 | -1.69E-46 |
| MS.gene057123 | MS.gene23332 | 0.826589 | 2.50E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene23332 | 0.876991 | 8.99E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene23332 | 0.837951 | 3.84E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene23332 | 0.83538 | 1.74E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene23332 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene23332 | 0.845806 | 3.23E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene23332 | 0.848246 | 6.92E-60 | -1.69E-46 |
| MS.gene058006 | MS.gene23332 | 0.806646 | 7.43E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene23332 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene23332 | 0.822801 | 1.95E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene23332 | 0.822649 | 2.12E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene23332 | 0.810887 | 9.22E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene23332 | 0.827692 | 1.36E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene23332 | 0.803794 | 2.94E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene23332 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene23332 | 0.836906 | 7.11E-57 | -1.69E-46 |
| MS.gene058459 | MS.gene23332 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene058588 | MS.gene23332 | 0.810332 | 1.21E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene23332 | 0.855473 | 6.16E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene23332 | 0.857481 | 1.59E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene23332 | 0.822358 | 2.47E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene23332 | -0.8304 | 3.00E-55 | -1.69E-46 |
| MS.gene058903 | MS.gene23332 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene23332 | 0.810265 | 1.26E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene23332 | 0.811871 | 5.64E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene23332 | 0.812225 | 4.72E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene23332 | 0.872851 | 2.31E-67 | -1.69E-46 |
| MS.gene05913 | MS.gene23332 | 0.838278 | 3.16E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene23332 | 0.858393 | 8.50E-63 | -1.69E-46 |
| MS.gene059536 | MS.gene23332 | 0.866531 | 2.66E-65 | -1.69E-46 |
| MS.gene059597 | MS.gene23332 | 0.809973 | 1.45E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene23332 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene23332 | 0.837518 | 4.96E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene23332 | 0.837676 | 4.52E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene23332 | 0.838218 | 3.28E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene23332 | 0.843112 | 1.71E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene23332 | 0.848235 | 6.97E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene23332 | 0.846917 | 1.61E-59 | -1.69E-46 |
| MS.gene059858 | MS.gene23332 | 0.813285 | 2.77E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene23332 | 0.876265 | 1.60E-68 | -1.69E-46 |
| MS.gene059960 | MS.gene23332 | 0.873702 | 1.20E-67 | -1.69E-46 |
| MS.gene059974 | MS.gene23332 | 0.802871 | 4.57E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene23332 | 0.805064 | 1.60E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene23332 | -0.809863 | 1.53E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene23332 | 0.811224 | 7.79E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene23332 | 0.887864 | 9.81E-73 | -1.69E-46 |
| MS.gene060818 | MS.gene23332 | 0.866615 | 2.50E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene23332 | 0.817897 | 2.60E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene23332 | 0.834452 | 2.97E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene23332 | 0.819673 | 1.03E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene23332 | 0.874369 | 7.13E-68 | -1.69E-46 |
| MS.gene061051 | MS.gene23332 | -0.810781 | 9.72E-51 | -1.69E-46 |
| MS.gene061134 | MS.gene23332 | 0.806623 | 7.52E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene23332 | 0.816793 | 4.60E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene23332 | 0.88048 | 5.30E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23332.t1 | MTR_4g071230 | 94.215 | 484 | 22 | 4 | 1 | 480 | 1 | 482 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23332.t1 | AT2G21370 | 72.104 | 423 | 118 | 0 | 56 | 478 | 53 | 475 | 0.0 | 647 |
| MS.gene23332.t1 | AT2G21370 | 73.947 | 380 | 99 | 0 | 99 | 478 | 3 | 382 | 0.0 | 595 |
| MS.gene23332.t1 | AT2G21370 | 72.905 | 358 | 97 | 0 | 56 | 413 | 53 | 410 | 0.0 | 555 |
| MS.gene23332.t1 | AT2G21370 | 75.238 | 315 | 78 | 0 | 99 | 413 | 3 | 317 | 1.34e-178 | 503 |
Find 106 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACTTGCATGGAATTT+TGG | 0.172318 | 4.4:-37341563 | MS.gene23332:CDS |
| AACTCCAATTGCTTGTTTAA+AGG | 0.241909 | 4.4:-37344301 | MS.gene23332:CDS |
| AGAGACATTGATACTGTTCT+TGG | 0.256310 | 4.4:+37345521 | None:intergenic |
| GAGGAACTTAGAAATAAATT+TGG | 0.271597 | 4.4:-37344279 | MS.gene23332:intron |
| GAATCGAGGATTCTCGGTTT+GGG | 0.311784 | 4.4:-37343176 | MS.gene23332:CDS |
| TGATTCTTAGGTTACATCAT+TGG | 0.316523 | 4.4:-37343235 | MS.gene23332:intron |
| GGGTTGGACTTTGGCACTTC+CGG | 0.317976 | 4.4:-37345443 | MS.gene23332:CDS |
| AAACAAGCAATTGGAGTTCC+AGG | 0.322393 | 4.4:+37344306 | None:intergenic |
| GTCATCGCCTTGATGATAAA+TGG | 0.338306 | 4.4:-37343146 | MS.gene23332:CDS |
| CAGTACCTTGGAGCCAAATC+TGG | 0.341368 | 4.4:+37342964 | None:intergenic |
| GTTGGTGGTGCTTCAAATAC+TGG | 0.348663 | 4.4:-37343120 | MS.gene23332:CDS |
| GGAAATCTTTCACCAGCTTT+TGG | 0.354679 | 4.4:+37342997 | None:intergenic |
| GATTCTTAGGTTACATCATT+GGG | 0.360067 | 4.4:-37343234 | MS.gene23332:intron |
| ATTGTGTCGATTTCTATTGA+TGG | 0.365963 | 4.4:-37345082 | MS.gene23332:CDS |
| TCCTCCTTTAAACAAGCAAT+TGG | 0.368678 | 4.4:+37344297 | None:intergenic |
| TCCGGTTGCAGATCCAGATT+TGG | 0.369397 | 4.4:-37342977 | MS.gene23332:CDS |
| ATATGTGAAAGATGTTAAAA+TGG | 0.372712 | 4.4:+37345673 | None:intergenic |
| GACGGTAAAAGATGAGAATA+TGG | 0.373140 | 4.4:+37344339 | None:intergenic |
| TGGCAGAGGATAGTAGTCTA+AGG | 0.378260 | 4.4:+37343017 | None:intergenic |
| AAAAGCTGGTGAAAGATTTC+CGG | 0.379132 | 4.4:-37342995 | MS.gene23332:CDS |
| GATGGATATGAGTCCACTTC+AGG | 0.389322 | 4.4:+37344378 | None:intergenic |
| AGAATCGAGGATTCTCGGTT+TGG | 0.392673 | 4.4:-37343177 | MS.gene23332:CDS |
| TGGCTTCTTCATGGAAAGCT+TGG | 0.398484 | 4.4:-37344553 | MS.gene23332:CDS |
| TGCATACGGAACTGCATTGT+TGG | 0.411658 | 4.4:-37340712 | MS.gene23332:CDS |
| AGCTATACTGTCAGTGGTTC+CGG | 0.412191 | 4.4:+37343700 | None:intergenic |
| GATGTTAAAATGGTGCTTGC+TGG | 0.419025 | 4.4:+37345683 | None:intergenic |
| TTCCGTATGCAGCTTCTGTT+TGG | 0.420105 | 4.4:+37340724 | None:intergenic |
| GGAATCCATTGCACGTATAG+AGG | 0.422783 | 4.4:-37341542 | MS.gene23332:intron |
| GGAAACAGGTTATTACTGTT+AGG | 0.425830 | 4.4:-37345551 | MS.gene23332:CDS |
| TTACCGTCCGTTCTTGCACC+TGG | 0.429144 | 4.4:-37344324 | MS.gene23332:CDS |
| GCAGAGCATACTGTATGGTT+TGG | 0.432761 | 4.4:+37344670 | None:intergenic |
| AACTGCATTGTTGGCAATGA+AGG | 0.435765 | 4.4:-37340703 | MS.gene23332:CDS |
| CTTGATGATAAATGGCTTGT+TGG | 0.440900 | 4.4:-37343138 | MS.gene23332:CDS |
| TTTACAGCAGGTAGTGCATC+AGG | 0.446244 | 4.4:+37344706 | None:intergenic |
| GAAAATGATACCGAGTATAG+TGG | 0.453765 | 4.4:+37345359 | None:intergenic |
| ACTCAAGAATCGAGGATTCT+CGG | 0.455333 | 4.4:-37343182 | MS.gene23332:CDS |
| CTGTATCTCGGGTTGGACTT+TGG | 0.462776 | 4.4:-37345452 | MS.gene23332:CDS |
| TGTTATTGCACCAAGCAGAT+TGG | 0.463073 | 4.4:-37344582 | MS.gene23332:CDS |
| GCCAAATCTGGATCTGCAAC+CGG | 0.465717 | 4.4:+37342976 | None:intergenic |
| GAATGGAGAGTCACATGATT+GGG | 0.467158 | 4.4:-37345170 | MS.gene23332:CDS |
| TATGGGTTGCTAAAGGATCT+AGG | 0.488772 | 4.4:-37340852 | MS.gene23332:CDS |
| GCCACAAAAGCCAATCTGCT+TGG | 0.490266 | 4.4:+37344572 | None:intergenic |
| CAGGTGAAAGGCTGTATCTC+GGG | 0.490454 | 4.4:-37345463 | MS.gene23332:CDS |
| AGAATGGAGAGTCACATGAT+TGG | 0.492505 | 4.4:-37345171 | MS.gene23332:CDS |
| CAACTCTCATTGTAAAGTAA+AGG | 0.495280 | 4.4:+37344730 | None:intergenic |
| ATGTGTTTGCGAAGGTTAAG+TGG | 0.500385 | 4.4:+37345103 | None:intergenic |
| TACTATCCTCTGCCAAAAGC+TGG | 0.504038 | 4.4:-37343009 | MS.gene23332:CDS |
| GATGATAAATGGCTTGTTGG+TGG | 0.509846 | 4.4:-37343135 | MS.gene23332:CDS |
| TTCACATATAGTCGAAAACT+TGG | 0.512881 | 4.4:-37345659 | MS.gene23332:intron |
| TGATACCGAGTATAGTGGAT+AGG | 0.519047 | 4.4:+37345364 | None:intergenic |
| GCAGGTGAAAGGCTGTATCT+CGG | 0.519687 | 4.4:-37345464 | MS.gene23332:CDS |
| GTTTGGTTTGCACGACTCAC+AGG | 0.521003 | 4.4:+37340741 | None:intergenic |
| TCTTACCTCTATACGTGCAA+TGG | 0.527339 | 4.4:+37341537 | None:intergenic |
| TTTGCTATCATTGACATTGG+TGG | 0.527618 | 4.4:-37345413 | MS.gene23332:CDS |
| TAAAATGGTGCTTGCTGGGT+GGG | 0.528829 | 4.4:+37345688 | None:intergenic |
| TCCAATTGCTTGTTTAAAGG+AGG | 0.535092 | 4.4:-37344298 | MS.gene23332:CDS |
| AAGATACGAGAAAGGGTGCT+TGG | 0.539627 | 4.4:-37340768 | MS.gene23332:CDS |
| AGATTATAATAATGCTCTGA+AGG | 0.544841 | 4.4:-37344524 | MS.gene23332:intron |
| GCAGCTCGTGCTACTCAACC+TGG | 0.545958 | 4.4:-37343668 | MS.gene23332:CDS |
| TGGAGTTCCAGGTGCAAGAA+CGG | 0.546664 | 4.4:+37344317 | None:intergenic |
| GGTTGAGAGACTAGCCATGA+TGG | 0.547884 | 4.4:+37344360 | None:intergenic |
| CAACTACTATCATTGTTGCT+AGG | 0.550256 | 4.4:-37345051 | MS.gene23332:intron |
| GATACCGAGTATAGTGGATA+GGG | 0.550490 | 4.4:+37345365 | None:intergenic |
| CAGTTTCTCTAGTTGATCAT+CGG | 0.550710 | 4.4:+37343071 | None:intergenic |
| AAAGGGATATGGGTTGCTAA+AGG | 0.551626 | 4.4:-37340859 | MS.gene23332:CDS |
| CAACAAGCCATTTATCATCA+AGG | 0.552580 | 4.4:+37343139 | None:intergenic |
| AGTGGACAAAGATACGAGAA+AGG | 0.554823 | 4.4:-37340776 | MS.gene23332:CDS |
| TGGATAGGGTCGCTTTGCCT+CGG | 0.555768 | 4.4:+37345379 | None:intergenic |
| ATGTTAAAATGGTGCTTGCT+GGG | 0.557496 | 4.4:+37345684 | None:intergenic |
| CAGATCCAGATTTGGCTCCA+AGG | 0.557605 | 4.4:-37342969 | MS.gene23332:intron |
| CACATGATTGGGTACGCTCG+TGG | 0.559882 | 4.4:-37345159 | MS.gene23332:CDS |
| AATGATGTTGAATACTTGCA+TGG | 0.562603 | 4.4:-37341571 | MS.gene23332:CDS |
| AATCGAGGATTCTCGGTTTG+GGG | 0.569766 | 4.4:-37343175 | MS.gene23332:CDS |
| AAGTGGACTCATATCCATCA+TGG | 0.572768 | 4.4:-37344374 | MS.gene23332:CDS |
| AAGGAGTGTGTTGTATGCAC+CGG | 0.573060 | 4.4:-37343719 | MS.gene23332:CDS |
| TGAAAGGCTGTATCTCGGGT+TGG | 0.578609 | 4.4:-37345459 | MS.gene23332:CDS |
| CTCTGTGTAAGCTCGTGTCA+TGG | 0.583558 | 4.4:-37344639 | MS.gene23332:CDS |
| TGGGAAGATAAGAAAATGGT+AGG | 0.584118 | 4.4:-37345725 | None:intergenic |
| GAGCATACTGTATGGTTTGG+AGG | 0.585331 | 4.4:+37344673 | None:intergenic |
| AGATTTGCTATCATTGACAT+TGG | 0.585612 | 4.4:-37345416 | MS.gene23332:CDS |
| AACCAAACAGAAGCTGCATA+CGG | 0.586418 | 4.4:-37340726 | MS.gene23332:CDS |
| TGTGTTTGCGAAGGTTAAGT+GGG | 0.587553 | 4.4:+37345104 | None:intergenic |
| TGTATGGTTTGGAGGTGCAA+TGG | 0.588665 | 4.4:+37344681 | None:intergenic |
| GTAGTGTGGGAGCAGGTGAA+AGG | 0.597368 | 4.4:-37345475 | MS.gene23332:CDS |
| GTCTAAGGAAGATATTTGTG+AGG | 0.598899 | 4.4:+37343032 | None:intergenic |
| TTAAAATGGTGCTTGCTGGG+TGG | 0.598985 | 4.4:+37345687 | None:intergenic |
| ACGATGCAGAGCATACTGTA+TGG | 0.600239 | 4.4:+37344665 | None:intergenic |
| AATGATAGCAAATCTTGCAC+CGG | 0.609625 | 4.4:+37345424 | None:intergenic |
| ATGTTGTACTGCAGTGACAC+AGG | 0.614244 | 4.4:-37344769 | MS.gene23332:intron |
| TGTGAAAACTTGATCCACTA+CGG | 0.615420 | 4.4:+37340824 | None:intergenic |
| TCTAAGGAAGATATTTGTGA+GGG | 0.615510 | 4.4:+37343033 | None:intergenic |
| TCGACACAATGTGTTTGCGA+AGG | 0.617735 | 4.4:+37345095 | None:intergenic |
| GGATCTAGGTGCAACCGTAG+TGG | 0.620019 | 4.4:-37340838 | MS.gene23332:CDS |
| AAACGCAGCTATACTGTCAG+TGG | 0.632976 | 4.4:+37343694 | None:intergenic |
| GTGACACAGGAGAACCGTTG+TGG | 0.635099 | 4.4:-37344756 | MS.gene23332:CDS |
| GCGACCCTATCCACTATACT+CGG | 0.636506 | 4.4:-37345369 | MS.gene23332:intron |
| GTGTCATGGTGGAATCGTGA+TGG | 0.637856 | 4.4:-37344625 | MS.gene23332:CDS |
| ACTGCATTGTTGGCAATGAA+GGG | 0.646066 | 4.4:-37340702 | MS.gene23332:CDS |
| TGGTGGCACAATTCAAGCCG+AGG | 0.648456 | 4.4:-37345396 | MS.gene23332:CDS |
| GTGGACAAAGATACGAGAAA+GGG | 0.650371 | 4.4:-37340775 | MS.gene23332:CDS |
| GTTCCAGGTGCAAGAACGGA+CGG | 0.651034 | 4.4:+37344321 | None:intergenic |
| ATTAAGCAACTCAAGAATCG+AGG | 0.655962 | 4.4:-37343190 | MS.gene23332:CDS |
| GGTTGGGTATGATCCTGAAG+TGG | 0.669877 | 4.4:-37344391 | MS.gene23332:CDS |
| TAAAGTAAAGGTCTCCACAA+CGG | 0.675201 | 4.4:+37344742 | None:intergenic |
| TGTGTAAGCTCGTGTCATGG+TGG | 0.682794 | 4.4:-37344636 | MS.gene23332:CDS |
| GGTGGTGCTTCAAATACTGG+AGG | 0.715567 | 4.4:-37343117 | MS.gene23332:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCTAGATTTATTTTAATA+CGG | - | chr4.4:37343722-37343741 | MS.gene23332:CDS | 10.0% |
| !! | AATAAAAAACTATTATTGAC+AGG | + | chr4.4:37343769-37343788 | None:intergenic | 15.0% |
| !! | ATTAAATCTGATTCTTTATA+TGG | + | chr4.4:37344621-37344640 | None:intergenic | 15.0% |
| !! | CATGAATAAATAATTAAAGA+AGG | + | chr4.4:37342776-37342795 | None:intergenic | 15.0% |
| !! | TATACAAGCTAATATTATAA+CGG | + | chr4.4:37343504-37343523 | None:intergenic | 15.0% |
| !! | TTTATAAAATTAACTCACTT+GGG | - | chr4.4:37343530-37343549 | MS.gene23332:intron | 15.0% |
| !!! | AAATTAAGATTTTCAAAAGA+TGG | - | chr4.4:37342819-37342838 | MS.gene23332:intron | 15.0% |
| !!! | AATAGTATTCTAAAAACAAA+AGG | + | chr4.4:37343792-37343811 | None:intergenic | 15.0% |
| !!! | AATTTTACTTCATATAATGA+TGG | + | chr4.4:37344903-37344922 | None:intergenic | 15.0% |
| !!! | AGAGCATTTAAATTATATTT+TGG | + | chr4.4:37342977-37342996 | None:intergenic | 15.0% |
| !!! | ATCTAGATTTATTTTAATAC+GGG | - | chr4.4:37343723-37343742 | MS.gene23332:CDS | 15.0% |
| !! | AATAAATATACTCCAATGTA+AGG | + | chr4.4:37344404-37344423 | None:intergenic | 20.0% |
| !! | AATATAATTTAAATGCTCTG+TGG | - | chr4.4:37342978-37342997 | MS.gene23332:CDS | 20.0% |
| !! | ACTGTATTTATAATAAGATC+AGG | - | chr4.4:37342882-37342901 | MS.gene23332:intron | 20.0% |
| !! | AGTACAAAATATTGTCAAAT+TGG | - | chr4.4:37341474-37341493 | MS.gene23332:intron | 20.0% |
| !! | ATATGTGAAAGATGTTAAAA+TGG | + | chr4.4:37340720-37340739 | None:intergenic | 20.0% |
| !! | ATCTTATTATAAATACAGTG+TGG | + | chr4.4:37342881-37342900 | None:intergenic | 20.0% |
| !! | CTGTAAAAAAAAAAATGAGT+TGG | + | chr4.4:37345418-37345437 | None:intergenic | 20.0% |
| !! | CTTATTAATTCAAAACCTTA+AGG | - | chr4.4:37343065-37343084 | MS.gene23332:CDS | 20.0% |
| !! | CTTTATAAAATTAACTCACT+TGG | - | chr4.4:37343529-37343548 | MS.gene23332:intron | 20.0% |
| !! | GAAATTGAAAATCATATACA+CGG | - | chr4.4:37342625-37342644 | MS.gene23332:intron | 20.0% |
| !! | GTACAAAATATTGTCAAATT+GGG | - | chr4.4:37341475-37341494 | MS.gene23332:intron | 20.0% |
| !! | TAAAAAGTTTATATGTGAGT+TGG | + | chr4.4:37342298-37342317 | None:intergenic | 20.0% |
| !! | TAAAGAATCAGATTTAATGT+TGG | - | chr4.4:37344623-37344642 | MS.gene23332:CDS | 20.0% |
| !! | TACAAAATATTGTCAAATTG+GGG | - | chr4.4:37341476-37341495 | MS.gene23332:intron | 20.0% |
| !! | TACATTGGAGTATATTTATT+AGG | - | chr4.4:37344404-37344423 | MS.gene23332:intron | 20.0% |
| !! | TCCAATAAAGTTTATGAAAA+TGG | + | chr4.4:37345124-37345143 | None:intergenic | 20.0% |
| !! | TGCAAAACATAAAAAAATTG+TGG | + | chr4.4:37341979-37341998 | None:intergenic | 20.0% |
| !! | TTATTTATTCATGATCTGTT+AGG | - | chr4.4:37342783-37342802 | MS.gene23332:intron | 20.0% |
| !! | TTGTAGATTTAATGAAATAC+CGG | + | chr4.4:37343821-37343840 | None:intergenic | 20.0% |
| !!! | ACAATTTTTTTATGTTTTGC+AGG | - | chr4.4:37341978-37341997 | MS.gene23332:intron | 20.0% |
| !!! | ATTTATTAGGAGCTTTAAAA+AGG | - | chr4.4:37344354-37344373 | MS.gene23332:CDS | 20.0% |
| !!! | CTACTACTATTTTAGAATTT+AGG | - | chr4.4:37344020-37344039 | MS.gene23332:intron | 20.0% |
| !!! | GTGAGTTAATTTTATAAAGA+AGG | + | chr4.4:37343528-37343547 | None:intergenic | 20.0% |
| !!! | TAATGTGATTGAGAATATTT+TGG | - | chr4.4:37341099-37341118 | MS.gene23332:intron | 20.0% |
| !!! | TATTATCTATTTTTCTAGCT+AGG | - | chr4.4:37341911-37341930 | MS.gene23332:intron | 20.0% |
| !!! | TATTTCCTTTTCTTTCTAAA+AGG | + | chr4.4:37344501-37344520 | None:intergenic | 20.0% |
| !!! | TATTTTGCTCTTACATTTTT+TGG | - | chr4.4:37345449-37345468 | MS.gene23332:CDS | 20.0% |
| !!! | TGAGTTGAACAATAAATTTA+AGG | + | chr4.4:37345309-37345328 | None:intergenic | 20.0% |
| !!! | TTAGAATACTATTTTTTCTC+CGG | - | chr4.4:37343799-37343818 | MS.gene23332:intron | 20.0% |
| !!! | TTATTTTGCATAATGACTAA+TGG | - | chr4.4:37344758-37344777 | MS.gene23332:CDS | 20.0% |
| ! | AAAATAAAAAGAGTCTTGGT+TGG | + | chr4.4:37344745-37344764 | None:intergenic | 25.0% |
| ! | AAGCATTATCCCTATAAAAT+GGG | + | chr4.4:37342367-37342386 | None:intergenic | 25.0% |
| ! | ACATTATGAGAAACAAAACA+AGG | + | chr4.4:37343134-37343153 | None:intergenic | 25.0% |
| ! | AGAAAAGGACAGTATTTATT+AGG | - | chr4.4:37344341-37344360 | MS.gene23332:CDS | 25.0% |
| ! | AGATAACAAAAAAAGTAGTG+TGG | - | chr4.4:37340901-37340920 | MS.gene23332:intron | 25.0% |
| ! | AGATTATAATAATGCTCTGA+AGG | - | chr4.4:37341866-37341885 | MS.gene23332:intron | 25.0% |
| ! | AGGGATAATGCTTATTAATA+TGG | - | chr4.4:37342374-37342393 | MS.gene23332:intron | 25.0% |
| ! | AGTATTTCTTAACTACCTAA+CGG | + | chr4.4:37344304-37344323 | None:intergenic | 25.0% |
| ! | ATAAGTTATGTGAGACTATT+TGG | + | chr4.4:37345206-37345225 | None:intergenic | 25.0% |
| ! | ATCTACAAATCATCATGTTA+AGG | - | chr4.4:37343833-37343852 | MS.gene23332:intron | 25.0% |
| ! | ATGCAAAATAAAAAGAGTCT+TGG | + | chr4.4:37344749-37344768 | None:intergenic | 25.0% |
| ! | CAAAATTCTAAACTAAGCAT+TGG | + | chr4.4:37343946-37343965 | None:intergenic | 25.0% |
| ! | CAAGAACAAACTTGAATATA+CGG | + | chr4.4:37344176-37344195 | None:intergenic | 25.0% |
| ! | CCATAGCAATCATATATATT+AGG | + | chr4.4:37342920-37342939 | None:intergenic | 25.0% |
| ! | CCTAATATATATGATTGCTA+TGG | - | chr4.4:37342917-37342936 | MS.gene23332:intron | 25.0% |
| ! | GAAAGAAGAATATTGAGATA+AGG | + | chr4.4:37342431-37342450 | None:intergenic | 25.0% |
| ! | GAAATAAAAAATGTCCCAAA+AGG | - | chr4.4:37344515-37344534 | MS.gene23332:intron | 25.0% |
| ! | GAGGAACTTAGAAATAAATT+TGG | - | chr4.4:37342111-37342130 | MS.gene23332:intron | 25.0% |
| ! | GATAACAAAAAAAGTAGTGT+GGG | - | chr4.4:37340902-37340921 | MS.gene23332:intron | 25.0% |
| ! | GATATCTTCAACAAAAGAAA+AGG | - | chr4.4:37344326-37344345 | MS.gene23332:CDS | 25.0% |
| ! | TAAGCATTATCCCTATAAAA+TGG | + | chr4.4:37342368-37342387 | None:intergenic | 25.0% |
| ! | TAAGTTATGTGAGACTATTT+GGG | + | chr4.4:37345205-37345224 | None:intergenic | 25.0% |
| ! | TCTCAATATTCTTCTTTCTT+TGG | - | chr4.4:37342433-37342452 | MS.gene23332:intron | 25.0% |
| ! | TCTCATAATGTTTGATTCTT+AGG | - | chr4.4:37343143-37343162 | MS.gene23332:CDS | 25.0% |
| !! | AAAAATGGTGTCAAAATAAG+TGG | + | chr4.4:37340793-37340812 | None:intergenic | 25.0% |
| !! | AAATGTCAAATAGTCCTTTT+GGG | + | chr4.4:37344532-37344551 | None:intergenic | 25.0% |
| !! | AAGTATTCAACATCATTTTC+TGG | + | chr4.4:37344816-37344835 | None:intergenic | 25.0% |
| !! | ATTGTATTTGAATTCTGAAG+TGG | - | chr4.4:37341596-37341615 | MS.gene23332:intron | 25.0% |
| !! | CTCTTGAAATATGGTATTTT+AGG | - | chr4.4:37345507-37345526 | MS.gene23332:CDS | 25.0% |
| !! | GTAGCATGAAAGTATAAAAA+TGG | + | chr4.4:37340808-37340827 | None:intergenic | 25.0% |
| !!! | AAATATGGTATTTTAGGCAA+AGG | - | chr4.4:37345513-37345532 | MS.gene23332:CDS | 25.0% |
| !!! | AAATTATATTTTGGTAGACC+AGG | + | chr4.4:37342968-37342987 | None:intergenic | 25.0% |
| !!! | AATATGGTATTTTAGGCAAA+GGG | - | chr4.4:37345514-37345533 | MS.gene23332:CDS | 25.0% |
| !!! | ACTAATGGAATTTGATTTTC+TGG | - | chr4.4:37344773-37344792 | MS.gene23332:intron | 25.0% |
| !!! | ATTAGGAGCTTTAAAATCAT+TGG | - | chr4.4:37344358-37344377 | MS.gene23332:CDS | 25.0% |
| !!! | CAAAGATTTTAACCAAGTTA+AGG | + | chr4.4:37342598-37342617 | None:intergenic | 25.0% |
| !!! | CAATGCTTAGTTTAGAATTT+TGG | - | chr4.4:37343944-37343963 | MS.gene23332:intron | 25.0% |
| !!! | CTAATGGAATTTGATTTTCT+GGG | - | chr4.4:37344774-37344793 | MS.gene23332:intron | 25.0% |
| !!! | GCCATTTTCATAAACTTTAT+TGG | - | chr4.4:37345120-37345139 | MS.gene23332:CDS | 25.0% |
| !!! | TGTTTTCAGCTTATTTTCAT+TGG | + | chr4.4:37345150-37345169 | None:intergenic | 25.0% |
| !!! | TTGACAATGTTCTAAAATTG+TGG | - | chr4.4:37341137-37341156 | MS.gene23332:intron | 25.0% |
| !!! | TTGTATTTGAATTCTGAAGT+GGG | - | chr4.4:37341597-37341616 | MS.gene23332:intron | 25.0% |
| !!! | TTTTTTATGTTTTGCAGGTT+GGG | - | chr4.4:37341983-37342002 | MS.gene23332:intron | 25.0% |
| !!! | TTTTTTTAAAACTCGGTATC+CGG | + | chr4.4:37343697-37343716 | None:intergenic | 25.0% |
| !!! | TTTTTTTATGTTTTGCAGGT+TGG | - | chr4.4:37341982-37342001 | MS.gene23332:intron | 25.0% |
| AACAACTATATTAAGCACCA+CGG | - | chr4.4:37342227-37342246 | MS.gene23332:intron | 30.0% | |
| AACTCCAAATTCTAACTTCA+TGG | + | chr4.4:37345262-37345281 | None:intergenic | 30.0% | |
| AACTCCAATTGCTTGTTTAA+AGG | - | chr4.4:37342089-37342108 | MS.gene23332:intron | 30.0% | |
| AAGTGTTAAAAGTTCCACAT+TGG | + | chr4.4:37344131-37344150 | None:intergenic | 30.0% | |
| AATGATGTTGAATACTTGCA+TGG | - | chr4.4:37344819-37344838 | MS.gene23332:intron | 30.0% | |
| AATTAATAAGCACCAACCAT+AGG | + | chr4.4:37343055-37343074 | None:intergenic | 30.0% | |
| ACAAAAATCTCAGCATACTT+TGG | + | chr4.4:37341184-37341203 | None:intergenic | 30.0% | |
| ACTCCAAATTCTAACTTCAT+GGG | + | chr4.4:37345261-37345280 | None:intergenic | 30.0% | |
| ACTTCATGATTTCAACAATG+TGG | + | chr4.4:37343901-37343920 | None:intergenic | 30.0% | |
| AGCATTATCCCTATAAAATG+GGG | + | chr4.4:37342366-37342385 | None:intergenic | 30.0% | |
| CAACTCTCATTGTAAAGTAA+AGG | + | chr4.4:37341663-37341682 | None:intergenic | 30.0% | |
| CACTATTTAACAACACTGAT+TGG | + | chr4.4:37341389-37341408 | None:intergenic | 30.0% | |
| CATTTCTTCTTCCAAAAACT+CGG | + | chr4.4:37344587-37344606 | None:intergenic | 30.0% | |
| CTCACTTATAAACACATTGT+TGG | - | chr4.4:37344093-37344112 | MS.gene23332:intron | 30.0% | |
| CTTCATGATTTCAACAATGT+GGG | + | chr4.4:37343900-37343919 | None:intergenic | 30.0% | |
| GAACTCATGAAAACAACTTA+CGG | + | chr4.4:37345181-37345200 | None:intergenic | 30.0% | |
| GATTCTTAGGTTACATCATT+GGG | - | chr4.4:37343156-37343175 | MS.gene23332:CDS | 30.0% | |
| GCTTAATATAGTTGTTTGGA+AGG | + | chr4.4:37342223-37342242 | None:intergenic | 30.0% | |
| GGATTATATATCTACCAATG+TGG | - | chr4.4:37344114-37344133 | MS.gene23332:intron | 30.0% | |
| GTATCAATGTCTCTCAAAAA+CGG | - | chr4.4:37340878-37340897 | MS.gene23332:intron | 30.0% | |
| TAAAATTAACTCACTTGGGT+TGG | - | chr4.4:37343534-37343553 | MS.gene23332:intron | 30.0% | |
| TAAGGTTGCACTATTCAAAT+TGG | + | chr4.4:37342413-37342432 | None:intergenic | 30.0% | |
| TATATATTGCTGTGTTGCAA+TGG | - | chr4.4:37342561-37342580 | MS.gene23332:intron | 30.0% | |
| TCAAACAAGTCAATCTAAAC+AGG | - | chr4.4:37345235-37345254 | MS.gene23332:intron | 30.0% | |
| TCTAAGGAAGATATTTGTGA+GGG | + | chr4.4:37343360-37343379 | None:intergenic | 30.0% | |
| TGATTCTTAGGTTACATCAT+TGG | - | chr4.4:37343155-37343174 | MS.gene23332:CDS | 30.0% | |
| TGGTGCTTAATATAGTTGTT+TGG | + | chr4.4:37342227-37342246 | None:intergenic | 30.0% | |
| TTAAGTTAGAAACCAGTTCT+TGG | + | chr4.4:37344969-37344988 | None:intergenic | 30.0% | |
| TTCACATATAGTCGAAAACT+TGG | - | chr4.4:37340731-37340750 | MS.gene23332:CDS | 30.0% | |
| TTCCTTGTCTTTAGTACTTA+GGG | - | chr4.4:37344550-37344569 | MS.gene23332:CDS | 30.0% | |
| TTCTAACTTAAGGCTATGTT+TGG | - | chr4.4:37344978-37344997 | MS.gene23332:intron | 30.0% | |
| TTTCCTTGTCTTTAGTACTT+AGG | - | chr4.4:37344549-37344568 | MS.gene23332:CDS | 30.0% | |
| TTTCTCTTGTCTAGAAAGAA+TGG | - | chr4.4:37341203-37341222 | MS.gene23332:intron | 30.0% | |
| ! | AAGAACTGGTTTCTAACTTA+AGG | - | chr4.4:37344968-37344987 | MS.gene23332:intron | 30.0% |
| ! | AGTTTGCTTTGATTGTGTTA+TGG | + | chr4.4:37344704-37344723 | None:intergenic | 30.0% |
| ! | ATTCAAGTTTGTTCTTGATG+AGG | - | chr4.4:37344179-37344198 | MS.gene23332:intron | 30.0% |
| ! | CAATCAGTGTTGTTAAATAG+TGG | - | chr4.4:37341387-37341406 | MS.gene23332:intron | 30.0% |
| ! | GAAATGTCAAATAGTCCTTT+TGG | + | chr4.4:37344533-37344552 | None:intergenic | 30.0% |
| ! | TACTTTTCTTATCAGGAAAC+AGG | - | chr4.4:37340825-37340844 | MS.gene23332:CDS | 30.0% |
| ! | TGAATACTTGCATGGAATTT+TGG | - | chr4.4:37344827-37344846 | MS.gene23332:intron | 30.0% |
| ! | TGTGGATAAATTTTCCAACT+CGG | + | chr4.4:37341961-37341980 | None:intergenic | 30.0% |
| ! | TTGACTTGAGTGACAATATT+AGG | - | chr4.4:37344253-37344272 | MS.gene23332:intron | 30.0% |
| ! | TTGGTTATTTCAACAATGTG+AGG | + | chr4.4:37343927-37343946 | None:intergenic | 30.0% |
| ! | TTTATATGTGAGTTGGCTAT+CGG | + | chr4.4:37342291-37342310 | None:intergenic | 30.0% |
| !! | AATGGCCTTTTAGAAAGAAA+AGG | - | chr4.4:37344493-37344512 | MS.gene23332:intron | 30.0% |
| !! | AGATTTGCTATCATTGACAT+TGG | - | chr4.4:37340974-37340993 | MS.gene23332:intron | 30.0% |
| !! | ATAAGCTTTGGAGCTTATAT+AGG | - | chr4.4:37343015-37343034 | MS.gene23332:CDS | 30.0% |
| !! | ATGTTGGTTCATTTATGTTC+AGG | - | chr4.4:37344639-37344658 | MS.gene23332:CDS | 30.0% |
| !! | ATTGATTTTGTTCCAAGAAC+TGG | - | chr4.4:37344954-37344973 | MS.gene23332:intron | 30.0% |
| !! | ATTGTGTCGATTTCTATTGA+TGG | - | chr4.4:37341308-37341327 | MS.gene23332:intron | 30.0% |
| !! | CTCATAAGTCAGTTTTGTAA+GGG | + | chr4.4:37344061-37344080 | None:intergenic | 30.0% |
| !! | GCTTAGTTTAGAATTTTGGT+TGG | - | chr4.4:37343948-37343967 | MS.gene23332:intron | 30.0% |
| !! | TATTTTAGGCAAAGGGATAT+GGG | - | chr4.4:37345521-37345540 | MS.gene23332:CDS | 30.0% |
| !! | TCTCATAAGTCAGTTTTGTA+AGG | + | chr4.4:37344062-37344081 | None:intergenic | 30.0% |
| !! | TCTTTCTAAAAGGCCATTTT+GGG | + | chr4.4:37344491-37344510 | None:intergenic | 30.0% |
| !! | TGTTGGTTCATTTATGTTCA+GGG | - | chr4.4:37344640-37344659 | MS.gene23332:CDS | 30.0% |
| !! | TTCTTTCTAAAAGGCCATTT+TGG | + | chr4.4:37344492-37344511 | None:intergenic | 30.0% |
| !!! | TATCCTTTCAGGTTTTCAAA+AGG | - | chr4.4:37342652-37342671 | MS.gene23332:intron | 30.0% |
| !!! | TTCATGCTACTTTTCTTATC+AGG | - | chr4.4:37340818-37340837 | MS.gene23332:CDS | 30.0% |
| AAAAGCTGGTGAAAGATTTC+CGG | - | chr4.4:37343395-37343414 | MS.gene23332:intron | 35.0% | |
| AATGATAGCAAATCTTGCAC+CGG | + | chr4.4:37340969-37340988 | None:intergenic | 35.0% | |
| ACAACAAGATGTCCAGAATT+GGG | + | chr4.4:37343993-37344012 | None:intergenic | 35.0% | |
| AGAGACATTGATACTGTTCT+TGG | + | chr4.4:37340872-37340891 | None:intergenic | 35.0% | |
| ATATAACGTGAGATGTCAAG+AGG | + | chr4.4:37343589-37343608 | None:intergenic | 35.0% | |
| ATCTCACGTTATATTCTCCT+TGG | - | chr4.4:37343595-37343614 | MS.gene23332:intron | 35.0% | |
| ATGTTAAAATGGTGCTTGCT+GGG | + | chr4.4:37340709-37340728 | None:intergenic | 35.0% | |
| ATTAAGCAACTCAAGAATCG+AGG | - | chr4.4:37343200-37343219 | MS.gene23332:CDS | 35.0% | |
| ATTCATCCACTAGATCCTAA+TGG | - | chr4.4:37345478-37345497 | MS.gene23332:CDS | 35.0% | |
| CAACAAGCCATTTATCATCA+AGG | + | chr4.4:37343254-37343273 | None:intergenic | 35.0% | |
| CAACTACTATCATTGTTGCT+AGG | - | chr4.4:37341339-37341358 | MS.gene23332:intron | 35.0% | |
| CACTGTATTTAAATGCATCC+TGG | - | chr4.4:37342947-37342966 | MS.gene23332:intron | 35.0% | |
| CAGTTTCTCTAGTTGATCAT+CGG | + | chr4.4:37343322-37343341 | None:intergenic | 35.0% | |
| GAAAATGATACCGAGTATAG+TGG | + | chr4.4:37341034-37341053 | None:intergenic | 35.0% | |
| GACAGGATTTCAACTTCATT+TGG | + | chr4.4:37343752-37343771 | None:intergenic | 35.0% | |
| GACGGTAAAAGATGAGAATA+TGG | + | chr4.4:37342054-37342073 | None:intergenic | 35.0% | |
| GCATAAAAAGCTATCCACAA+TGG | + | chr4.4:37343112-37343131 | None:intergenic | 35.0% | |
| GGAAACAGGTTATTACTGTT+AGG | - | chr4.4:37340839-37340858 | MS.gene23332:CDS | 35.0% | |
| GGATGCATTTAAATACAGTG+TGG | + | chr4.4:37342947-37342966 | None:intergenic | 35.0% | |
| GTCTAAGGAAGATATTTGTG+AGG | + | chr4.4:37343361-37343380 | None:intergenic | 35.0% | |
| TAAAGTAAAGGTCTCCACAA+CGG | + | chr4.4:37341651-37341670 | None:intergenic | 35.0% | |
| TACAACAAGATGTCCAGAAT+TGG | + | chr4.4:37343994-37344013 | None:intergenic | 35.0% | |
| TCATTTGGCAATCCTTACAT+TGG | - | chr4.4:37344389-37344408 | MS.gene23332:CDS | 35.0% | |
| TCCAATTGCTTGTTTAAAGG+AGG | - | chr4.4:37342092-37342111 | MS.gene23332:intron | 35.0% | |
| TCCTCCTTTAAACAAGCAAT+TGG | + | chr4.4:37342096-37342115 | None:intergenic | 35.0% | |
| TGGTAAGCACTCTTGAAATA+TGG | - | chr4.4:37345498-37345517 | MS.gene23332:CDS | 35.0% | |
| TGTGAAAACTTGATCCACTA+CGG | + | chr4.4:37345569-37345588 | None:intergenic | 35.0% | |
| TTATCCCTATAAAATGGGGT+TGG | + | chr4.4:37342362-37342381 | None:intergenic | 35.0% | |
| TTGCTTTGATTGTGTTATGG+TGG | + | chr4.4:37344701-37344720 | None:intergenic | 35.0% | |
| ! | AAGTTCCAACCCCATTTTAT+AGG | - | chr4.4:37342354-37342373 | MS.gene23332:intron | 35.0% |
| ! | AGTTCCAACCCCATTTTATA+GGG | - | chr4.4:37342355-37342374 | MS.gene23332:intron | 35.0% |
| ! | CAAAACTGACTTATGAGATG+AGG | - | chr4.4:37344064-37344083 | MS.gene23332:intron | 35.0% |
| ! | CAAGAAATTACAGCTTTTCC+AGG | + | chr4.4:37342743-37342762 | None:intergenic | 35.0% |
| ! | CTTGATGATAAATGGCTTGT+TGG | - | chr4.4:37343252-37343271 | MS.gene23332:intron | 35.0% |
| ! | GCATTGGATTTTCCTTAACT+TGG | - | chr4.4:37342583-37342602 | MS.gene23332:intron | 35.0% |
| ! | GTGTTGTTAAATAGTGGCTA+TGG | - | chr4.4:37341393-37341412 | MS.gene23332:intron | 35.0% |
| ! | TCATTGGAGTACTTCTCATT+TGG | - | chr4.4:37344374-37344393 | MS.gene23332:CDS | 35.0% |
| ! | TTATATGTGAGTTGGCTATC+GGG | + | chr4.4:37342290-37342309 | None:intergenic | 35.0% |
| ! | TTCTGGACATCTTGTTGTAT+AGG | - | chr4.4:37343995-37344014 | MS.gene23332:intron | 35.0% |
| ! | TTTGCTATCATTGACATTGG+TGG | - | chr4.4:37340977-37340996 | MS.gene23332:intron | 35.0% |
| !! | ACTCCTTTTGAAAACCTGAA+AGG | + | chr4.4:37342658-37342677 | None:intergenic | 35.0% |
| !! | AGGCTTTTAACTAACTGTGA+AGG | + | chr4.4:37345289-37345308 | None:intergenic | 35.0% |
| !! | GTATTTTAGGCAAAGGGATA+TGG | - | chr4.4:37345520-37345539 | MS.gene23332:CDS | 35.0% |
| !! | TTAGGAGCTTTAAAAAGGAC+AGG | - | chr4.4:37344422-37344441 | MS.gene23332:intron | 35.0% |
| !! | TTTCAAGAGTGCTTACCATT+AGG | + | chr4.4:37345496-37345515 | None:intergenic | 35.0% |
| !!! | TTGTGCATCGATTTTACTTG+TGG | + | chr4.4:37342519-37342538 | None:intergenic | 35.0% |
| AAAAAAAGTAGTGTGGGAGC+AGG | - | chr4.4:37340908-37340927 | MS.gene23332:intron | 40.0% | |
| AAACAAGCAATTGGAGTTCC+AGG | + | chr4.4:37342087-37342106 | None:intergenic | 40.0% | |
| AACCAAACAGAAGCTGCATA+CGG | - | chr4.4:37345664-37345683 | MS.gene23332:CDS | 40.0% | |
| AACTGCATTGTTGGCAATGA+AGG | - | chr4.4:37345687-37345706 | MS.gene23332:CDS | 40.0% | |
| AATGGATCCATTCAGTACCT+TGG | + | chr4.4:37343441-37343460 | None:intergenic | 40.0% | |
| ACTCAAGAATCGAGGATTCT+CGG | - | chr4.4:37343208-37343227 | MS.gene23332:CDS | 40.0% | |
| ACTGCATTGTTGGCAATGAA+GGG | - | chr4.4:37345688-37345707 | MS.gene23332:CDS | 40.0% | |
| AGAATGGAGAGTCACATGAT+TGG | - | chr4.4:37341219-37341238 | MS.gene23332:intron | 40.0% | |
| AGCCCTAAGTACTAAAGACA+AGG | + | chr4.4:37344555-37344574 | None:intergenic | 40.0% | |
| AGGCCCATGAAGTTAGAATT+TGG | - | chr4.4:37345255-37345274 | MS.gene23332:intron | 40.0% | |
| AGTGGACAAAGATACGAGAA+AGG | - | chr4.4:37345614-37345633 | MS.gene23332:intron | 40.0% | |
| ATCTGTACCAAGCAACACTT+TGG | - | chr4.4:37342173-37342192 | MS.gene23332:intron | 40.0% | |
| ATGTCCAGAATTGGGCATAA+GGG | + | chr4.4:37343985-37344004 | None:intergenic | 40.0% | |
| ATGTGTTTGCGAAGGTTAAG+TGG | + | chr4.4:37341290-37341309 | None:intergenic | 40.0% | |
| CAATGTGGGAACTTATGCTT+TGG | + | chr4.4:37343886-37343905 | None:intergenic | 40.0% | |
| CCACAATGGTGAATCTAAAG+AGG | + | chr4.4:37343098-37343117 | None:intergenic | 40.0% | |
| CCTCTTTAGATTCACCATTG+TGG | - | chr4.4:37343095-37343114 | MS.gene23332:CDS | 40.0% | |
| CCTTAACAAGTGTCCCAAAA+TGG | - | chr4.4:37344475-37344494 | MS.gene23332:intron | 40.0% | |
| CTTAAGACCGACTAATCCAA+GGG | + | chr4.4:37343674-37343693 | None:intergenic | 40.0% | |
| GAATGGAGAGTCACATGATT+GGG | - | chr4.4:37341220-37341239 | MS.gene23332:intron | 40.0% | |
| GATGTTAAAATGGTGCTTGC+TGG | + | chr4.4:37340710-37340729 | None:intergenic | 40.0% | |
| GCACAAGTAACACAACTTTC+TGG | - | chr4.4:37342533-37342552 | MS.gene23332:intron | 40.0% | |
| GTGGACAAAGATACGAGAAA+GGG | - | chr4.4:37345615-37345634 | MS.gene23332:intron | 40.0% | |
| TCTGTACCAAGCAACACTTT+GGG | - | chr4.4:37342174-37342193 | MS.gene23332:intron | 40.0% | |
| TCTTACCTCTATACGTGCAA+TGG | + | chr4.4:37344856-37344875 | None:intergenic | 40.0% | |
| TGCTTACCATTAGGATCTAG+TGG | + | chr4.4:37345487-37345506 | None:intergenic | 40.0% | |
| TGTGTTTGCGAAGGTTAAGT+GGG | + | chr4.4:37341289-37341308 | None:intergenic | 40.0% | |
| TGTTATTGCACCAAGCAGAT+TGG | - | chr4.4:37341808-37341827 | MS.gene23332:intron | 40.0% | |
| TTCAGGGACAAAGCCAAATT+TGG | - | chr4.4:37344656-37344675 | MS.gene23332:CDS | 40.0% | |
| TTCTCATGGGAGATAAGCTT+TGG | - | chr4.4:37343003-37343022 | MS.gene23332:CDS | 40.0% | |
| TTTCTTGAGAAGTCACCGTT+AGG | - | chr4.4:37344286-37344305 | MS.gene23332:CDS | 40.0% | |
| ! | AAAGGGATATGGGTTGCTAA+AGG | - | chr4.4:37345531-37345550 | MS.gene23332:CDS | 40.0% |
| ! | AAGTGGACTCATATCCATCA+TGG | - | chr4.4:37342016-37342035 | MS.gene23332:intron | 40.0% |
| ! | GATTTTACTTGTGGCACAAC+TGG | + | chr4.4:37342510-37342529 | None:intergenic | 40.0% |
| ! | GGAAATCTTTCACCAGCTTT+TGG | + | chr4.4:37343396-37343415 | None:intergenic | 40.0% |
| ! | GTCATCGCCTTGATGATAAA+TGG | - | chr4.4:37343244-37343263 | MS.gene23332:intron | 40.0% |
| ! | TATATGTGAGTTGGCTATCG+GGG | + | chr4.4:37342289-37342308 | None:intergenic | 40.0% |
| ! | TATGGGTTGCTAAAGGATCT+AGG | - | chr4.4:37345538-37345557 | MS.gene23332:CDS | 40.0% |
| ! | TCAACATCATTTTCTGGACG+TGG | + | chr4.4:37344810-37344829 | None:intergenic | 40.0% |
| ! | TTGGCATGATGATGTTGACT+TGG | - | chr4.4:37343553-37343572 | MS.gene23332:intron | 40.0% |
| !! | ATTGGATCCCTTGGATTAGT+CGG | - | chr4.4:37343664-37343683 | MS.gene23332:CDS | 40.0% |
| !! | GATACCGAGTATAGTGGATA+GGG | + | chr4.4:37341028-37341047 | None:intergenic | 40.0% |
| !! | GATGATAAATGGCTTGTTGG+TGG | - | chr4.4:37343255-37343274 | MS.gene23332:intron | 40.0% |
| !! | TATTACCCCAAAGTGTTGCT+TGG | + | chr4.4:37342183-37342202 | None:intergenic | 40.0% |
| !! | TGATACCGAGTATAGTGGAT+AGG | + | chr4.4:37341029-37341048 | None:intergenic | 40.0% |
| !! | TGGAATTTGATTTTCTGGGC+AGG | - | chr4.4:37344778-37344797 | MS.gene23332:intron | 40.0% |
| !! | TGGCATGATGATGTTGACTT+GGG | - | chr4.4:37343554-37343573 | MS.gene23332:intron | 40.0% |
| !!! | CCATTTTGGGACACTTGTTA+AGG | + | chr4.4:37344478-37344497 | None:intergenic | 40.0% |
| AAACGCAGCTATACTGTCAG+TGG | + | chr4.4:37342699-37342718 | None:intergenic | 45.0% | |
| AATGCTCTGTGGTCTTCTCA+TGG | - | chr4.4:37342989-37343008 | MS.gene23332:CDS | 45.0% | |
| ACGATGCAGAGCATACTGTA+TGG | + | chr4.4:37341728-37341747 | None:intergenic | 45.0% | |
| AGAATCGAGGATTCTCGGTT+TGG | - | chr4.4:37343213-37343232 | MS.gene23332:CDS | 45.0% | |
| AGCTATACTGTCAGTGGTTC+CGG | + | chr4.4:37342693-37342712 | None:intergenic | 45.0% | |
| ATGCTCTGTGGTCTTCTCAT+GGG | - | chr4.4:37342990-37343009 | MS.gene23332:CDS | 45.0% | |
| ATGTTGTACTGCAGTGACAC+AGG | - | chr4.4:37341621-37341640 | MS.gene23332:intron | 45.0% | |
| CCAACCATAGGAACGAACAA+AGG | + | chr4.4:37343043-37343062 | None:intergenic | 45.0% | |
| CCTTTGTTCGTTCCTATGGT+TGG | - | chr4.4:37343040-37343059 | MS.gene23332:CDS | 45.0% | |
| CGTTCCAACAGAGAGCAAAA+TGG | + | chr4.4:37343459-37343478 | None:intergenic | 45.0% | |
| CTGTACCAAGCAACACTTTG+GGG | - | chr4.4:37342175-37342194 | MS.gene23332:intron | 45.0% | |
| CTTGTGGCACAACTGGAATT+TGG | + | chr4.4:37342503-37342522 | None:intergenic | 45.0% | |
| GAATCGAGGATTCTCGGTTT+GGG | - | chr4.4:37343214-37343233 | MS.gene23332:CDS | 45.0% | |
| GAGGAGCGAAAAATGAGAAG+TGG | - | chr4.4:37345596-37345615 | MS.gene23332:intron | 45.0% | |
| GATGGATATGAGTCCACTTC+AGG | + | chr4.4:37342015-37342034 | None:intergenic | 45.0% | |
| GATGTCCAGAATTGGGCATA+AGG | + | chr4.4:37343986-37344005 | None:intergenic | 45.0% | |
| GCAGAGCATACTGTATGGTT+TGG | + | chr4.4:37341723-37341742 | None:intergenic | 45.0% | |
| GCTTAAGACCGACTAATCCA+AGG | + | chr4.4:37343675-37343694 | None:intergenic | 45.0% | |
| GGAATCCATTGCACGTATAG+AGG | - | chr4.4:37344848-37344867 | MS.gene23332:intron | 45.0% | |
| TACACGGTGCATATCCTTTC+AGG | - | chr4.4:37342641-37342660 | MS.gene23332:intron | 45.0% | |
| TACTATCCTCTGCCAAAAGC+TGG | - | chr4.4:37343381-37343400 | MS.gene23332:intron | 45.0% | |
| TCAACCCTTATGCCCAATTC+TGG | - | chr4.4:37343978-37343997 | MS.gene23332:intron | 45.0% | |
| TCAAGTCTCAACGCTCAAGA+AGG | + | chr4.4:37342466-37342485 | None:intergenic | 45.0% | |
| TCGACACAATGTGTTTGCGA+AGG | + | chr4.4:37341298-37341317 | None:intergenic | 45.0% | |
| TGCATACGGAACTGCATTGT+TGG | - | chr4.4:37345678-37345697 | MS.gene23332:CDS | 45.0% | |
| TGGCAGAGGATAGTAGTCTA+AGG | + | chr4.4:37343376-37343395 | None:intergenic | 45.0% | |
| TGGCTTCTTCATGGAAAGCT+TGG | - | chr4.4:37341837-37341856 | MS.gene23332:intron | 45.0% | |
| TGTGGGAACTTATGCTTTGG+AGG | + | chr4.4:37343883-37343902 | None:intergenic | 45.0% | |
| TTAACCTGCAAGTGGACGAT+GGG | - | chr4.4:37343641-37343660 | MS.gene23332:intron | 45.0% | |
| TTCCGTATGCAGCTTCTGTT+TGG | + | chr4.4:37345669-37345688 | None:intergenic | 45.0% | |
| TTGCTGTGTTGCAATGGCAT+TGG | - | chr4.4:37342567-37342586 | MS.gene23332:intron | 45.0% | |
| TTTACAGCAGGTAGTGCATC+AGG | + | chr4.4:37341687-37341706 | None:intergenic | 45.0% | |
| ! | AAGGAGTGTGTTGTATGCAC+CGG | - | chr4.4:37342671-37342690 | MS.gene23332:intron | 45.0% |
| ! | AATCGAGGATTCTCGGTTTG+GGG | - | chr4.4:37343215-37343234 | MS.gene23332:CDS | 45.0% |
| ! | CTGATGACTGACCGAGTTTT+TGG | - | chr4.4:37344573-37344592 | MS.gene23332:CDS | 45.0% |
| ! | GAGCATACTGTATGGTTTGG+AGG | + | chr4.4:37341720-37341739 | None:intergenic | 45.0% |
| ! | GGATCCATTTTGCTCTCTGT+TGG | - | chr4.4:37343452-37343471 | MS.gene23332:intron | 45.0% |
| ! | GTGGATCAAGTTTTCACAGC+CGG | - | chr4.4:37345571-37345590 | MS.gene23332:intron | 45.0% |
| ! | TAAAATGGTGCTTGCTGGGT+GGG | + | chr4.4:37340705-37340724 | None:intergenic | 45.0% |
| ! | TGGCTTTTGTGGCTTCTTCA+TGG | - | chr4.4:37341828-37341847 | MS.gene23332:intron | 45.0% |
| ! | TGTATGGTTTGGAGGTGCAA+TGG | + | chr4.4:37341712-37341731 | None:intergenic | 45.0% |
| ! | TTAAAATGGTGCTTGCTGGG+TGG | + | chr4.4:37340706-37340725 | None:intergenic | 45.0% |
| !! | AAGATACGAGAAAGGGTGCT+TGG | - | chr4.4:37345622-37345641 | MS.gene23332:intron | 45.0% |
| !! | AAGGACTAGCCCAACGAAAT+TGG | + | chr4.4:37343623-37343642 | None:intergenic | 45.0% |
| !! | GGTGAATCTAAAGAGGTGCT+TGG | + | chr4.4:37343091-37343110 | None:intergenic | 45.0% |
| !! | GGTGCAATGGATTTTACAGC+AGG | + | chr4.4:37341699-37341718 | None:intergenic | 45.0% |
| !! | GTTGGTGGTGCTTCAAATAC+TGG | - | chr4.4:37343270-37343289 | MS.gene23332:intron | 45.0% |
| !! | TAAAGAGGTGCTTGGCCTTA+AGG | + | chr4.4:37343083-37343102 | None:intergenic | 45.0% |
| !! | TCCTTGGTGCCAATTTCGTT+GGG | - | chr4.4:37343611-37343630 | MS.gene23332:intron | 45.0% |
| !! | TGGATTAGTCGGTCTTAAGC+CGG | - | chr4.4:37343675-37343694 | MS.gene23332:CDS | 45.0% |
| !! | TTTGGCTCCAAGGTACTGAA+TGG | - | chr4.4:37343431-37343450 | MS.gene23332:intron | 45.0% |
| !!! | ACCAAGCAGATTGGCTTTTG+TGG | - | chr4.4:37341817-37341836 | MS.gene23332:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTAAAACT+CGG | + | chr4.4:37343704-37343723 | None:intergenic | 5.0% |
| CAGGTGAAAGGCTGTATCTC+GGG | - | chr4.4:37340927-37340946 | MS.gene23332:intron | 50.0% | |
| CAGTACCTTGGAGCCAAATC+TGG | + | chr4.4:37343429-37343448 | None:intergenic | 50.0% | |
| CATCGTCCACTTGCAGGTTA+AGG | + | chr4.4:37343642-37343661 | None:intergenic | 50.0% | |
| CTCTGTGTAAGCTCGTGTCA+TGG | - | chr4.4:37341751-37341770 | MS.gene23332:intron | 50.0% | |
| CTCTGTTGCGATATCCGAGT+TGG | - | chr4.4:37341944-37341963 | MS.gene23332:intron | 50.0% | |
| CTTAACCTGCAAGTGGACGA+TGG | - | chr4.4:37343640-37343659 | MS.gene23332:intron | 50.0% | |
| GCAGGTGAAAGGCTGTATCT+CGG | - | chr4.4:37340926-37340945 | MS.gene23332:intron | 50.0% | |
| GCCAAATCTGGATCTGCAAC+CGG | + | chr4.4:37343417-37343436 | None:intergenic | 50.0% | |
| GCCACAAAAGCCAATCTGCT+TGG | + | chr4.4:37341821-37341840 | None:intergenic | 50.0% | |
| GCGACCCTATCCACTATACT+CGG | - | chr4.4:37341021-37341040 | MS.gene23332:intron | 50.0% | |
| GCGTTGAGACTTGAGACACA+CGG | - | chr4.4:37342472-37342491 | MS.gene23332:intron | 50.0% | |
| GCTAGTCCTTAACCTGCAAG+TGG | - | chr4.4:37343633-37343652 | MS.gene23332:intron | 50.0% | |
| GGCTCCTTTGTTCGTTCCTA+TGG | - | chr4.4:37343036-37343055 | MS.gene23332:CDS | 50.0% | |
| GGTGGTGCTTCAAATACTGG+AGG | - | chr4.4:37343273-37343292 | MS.gene23332:intron | 50.0% | |
| GGTTGGGTATGATCCTGAAG+TGG | - | chr4.4:37341999-37342018 | MS.gene23332:intron | 50.0% | |
| TCCGGTTGCAGATCCAGATT+TGG | - | chr4.4:37343413-37343432 | MS.gene23332:intron | 50.0% | |
| TGAAAGGCTGTATCTCGGGT+TGG | - | chr4.4:37340931-37340950 | MS.gene23332:intron | 50.0% | |
| TGGAGTTCCAGGTGCAAGAA+CGG | + | chr4.4:37342076-37342095 | None:intergenic | 50.0% | |
| TGTGTAAGCTCGTGTCATGG+TGG | - | chr4.4:37341754-37341773 | MS.gene23332:intron | 50.0% | |
| ! | CAGATCCAGATTTGGCTCCA+AGG | - | chr4.4:37343421-37343440 | MS.gene23332:intron | 50.0% |
| ! | CTTTCACCAGCTTTTGGCAG+AGG | + | chr4.4:37343390-37343409 | None:intergenic | 50.0% |
| ! | GATCAAGTTTTCACAGCCGG+TGG | - | chr4.4:37345574-37345593 | MS.gene23332:intron | 50.0% |
| ! | GGTTGAGAGACTAGCCATGA+TGG | + | chr4.4:37342033-37342052 | None:intergenic | 50.0% |
| ! | GTGTCATGGTGGAATCGTGA+TGG | - | chr4.4:37341765-37341784 | MS.gene23332:intron | 50.0% |
| !! | CTCATTTTTCGCTCCTCCAC+CGG | + | chr4.4:37345593-37345612 | None:intergenic | 50.0% |
| !! | CTCCTTGGTGCCAATTTCGT+TGG | - | chr4.4:37343610-37343629 | MS.gene23332:intron | 50.0% |
| !! | CTGTATCTCGGGTTGGACTT+TGG | - | chr4.4:37340938-37340957 | MS.gene23332:intron | 50.0% |
| !! | GTTTGGTTTGCACGACTCAC+AGG | + | chr4.4:37345652-37345671 | None:intergenic | 50.0% |
| CAATCCCATCGTCCACTTGC+AGG | + | chr4.4:37343648-37343667 | None:intergenic | 55.0% | |
| CACATGATTGGGTACGCTCG+TGG | - | chr4.4:37341231-37341250 | MS.gene23332:intron | 55.0% | |
| CTGCAAGTGGACGATGGGAT+TGG | - | chr4.4:37343646-37343665 | MS.gene23332:intron | 55.0% | |
| GACGATGGGATTGGATCCCT+TGG | - | chr4.4:37343655-37343674 | MS.gene23332:intron | 55.0% | |
| GCCCAACGAAATTGGCACCA+AGG | + | chr4.4:37343615-37343634 | None:intergenic | 55.0% | |
| GGATCTAGGTGCAACCGTAG+TGG | - | chr4.4:37345552-37345571 | MS.gene23332:CDS | 55.0% | |
| GGGTTGGACTTTGGCACTTC+CGG | - | chr4.4:37340947-37340966 | MS.gene23332:intron | 55.0% | |
| GTAGTGTGGGAGCAGGTGAA+AGG | - | chr4.4:37340915-37340934 | MS.gene23332:intron | 55.0% | |
| GTGACACAGGAGAACCGTTG+TGG | - | chr4.4:37341634-37341653 | MS.gene23332:intron | 55.0% | |
| GTTCCAGGTGCAAGAACGGA+CGG | + | chr4.4:37342072-37342091 | None:intergenic | 55.0% | |
| TGGTGGCACAATTCAAGCCG+AGG | - | chr4.4:37340994-37341013 | MS.gene23332:intron | 55.0% | |
| TTACCGTCCGTTCTTGCACC+TGG | - | chr4.4:37342066-37342085 | MS.gene23332:intron | 55.0% | |
| ! | CAAGTTTTCACAGCCGGTGG+AGG | - | chr4.4:37345577-37345596 | MS.gene23332:intron | 55.0% |
| ! | TGGATAGGGTCGCTTTGCCT+CGG | + | chr4.4:37341014-37341033 | None:intergenic | 55.0% |
| ! | GCAGCTCGTGCTACTCAACC+TGG | - | chr4.4:37342722-37342741 | MS.gene23332:intron | 60.0% |
| CGCTCTCTGAGCCTTGAGCC+TGG | - | chr4.4:37342254-37342273 | MS.gene23332:intron | 65.0% | |
| GTTGGCTATCGGGGCTCACC+AGG | + | chr4.4:37342280-37342299 | None:intergenic | 65.0% | |
| TCTGAGCCTTGAGCCTGGCC+TGG | - | chr4.4:37342259-37342278 | MS.gene23332:intron | 65.0% | |
| CTATCGGGGCTCACCAGGCC+AGG | + | chr4.4:37342275-37342294 | None:intergenic | 70.0% | |
| GGCTCACCAGGCCAGGCTCA+AGG | + | chr4.4:37342268-37342287 | None:intergenic | 70.0% | |
| !! | GGCTCAGAGAGCGCTGACCG+TGG | + | chr4.4:37342247-37342266 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37340680 | 37345732 | 37340680 | ID=MS.gene23332 |
| chr4.4 | mRNA | 37340680 | 37345732 | 37340680 | ID=MS.gene23332.t1;Parent=MS.gene23332 |
| chr4.4 | exon | 37345660 | 37345732 | 37345660 | ID=MS.gene23332.t1.exon1;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37345660 | 37345732 | 37345660 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37345370 | 37345572 | 37345370 | ID=MS.gene23332.t1.exon2;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37345370 | 37345572 | 37345370 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37345052 | 37345191 | 37345052 | ID=MS.gene23332.t1.exon3;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37345052 | 37345191 | 37345052 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37344525 | 37344777 | 37344525 | ID=MS.gene23332.t1.exon4;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37344525 | 37344777 | 37344525 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37344280 | 37344412 | 37344280 | ID=MS.gene23332.t1.exon5;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37344280 | 37344412 | 37344280 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37343661 | 37343749 | 37343661 | ID=MS.gene23332.t1.exon6;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37343661 | 37343749 | 37343661 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37342970 | 37343247 | 37342970 | ID=MS.gene23332.t1.exon7;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37342970 | 37343247 | 37342970 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37341543 | 37341612 | 37341543 | ID=MS.gene23332.t1.exon8;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37341543 | 37341612 | 37341543 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| chr4.4 | exon | 37340680 | 37340883 | 37340680 | ID=MS.gene23332.t1.exon9;Parent=MS.gene23332.t1 |
| chr4.4 | CDS | 37340680 | 37340883 | 37340680 | ID=cds.MS.gene23332.t1;Parent=MS.gene23332.t1 |
| Gene Sequence |
| Protein sequence |
