AlfalfaGEDB | MS.gene29105

M. sativa cultivar XinJiangDaYe / MS.gene29105

KEGG: K02952
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0097159 GO:0110165 GO:1901363 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00416.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29105.t1	XP_003601110.1	98.8	166	2	0	1	166	1	166	1.60E-84	322

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29105.t1	P42732	70.8	168	44	2	1	165	1	166	3.1e-60	232.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29105.t1	G7J3M7	98.8	166	2	0	1	166	1	166	1.2e-84	322.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049134	MS.gene29105	-0.810787	9.69E-51	-1.69E-46
MS.gene049137	MS.gene29105	0.815477	9.06E-52	-1.69E-46
MS.gene049150	MS.gene29105	0.803215	3.88E-49	-1.69E-46
MS.gene049153	MS.gene29105	0.802436	5.62E-49	-1.69E-46
MS.gene049346	MS.gene29105	0.810327	1.22E-50	-1.69E-46
MS.gene049351	MS.gene29105	0.846351	2.29E-59	-1.69E-46
MS.gene049356	MS.gene29105	0.822153	2.76E-53	-1.69E-46
MS.gene049427	MS.gene29105	0.807444	5.04E-50	-1.69E-46
MS.gene049488	MS.gene29105	0.809074	2.26E-50	-1.69E-46
MS.gene049491	MS.gene29105	0.821354	4.22E-53	-1.69E-46
MS.gene049661	MS.gene29105	0.852077	5.85E-61	-1.69E-46
MS.gene049662	MS.gene29105	0.844719	6.35E-59	-1.69E-46
MS.gene049681	MS.gene29105	0.820651	6.13E-53	-1.69E-46
MS.gene049758	MS.gene29105	0.847369	1.21E-59	-1.69E-46
MS.gene049805	MS.gene29105	0.813851	2.08E-51	-1.69E-46
MS.gene049910	MS.gene29105	0.846037	2.79E-59	-1.69E-46
MS.gene049993	MS.gene29105	0.8061	9.69E-50	-1.69E-46
MS.gene050076	MS.gene29105	0.840919	6.51E-58	-1.69E-46
MS.gene050128	MS.gene29105	0.805671	1.19E-49	-1.69E-46
MS.gene050231	MS.gene29105	0.836726	7.90E-57	-1.69E-46
MS.gene050301	MS.gene29105	0.890742	7.48E-74	-1.69E-46
MS.gene050397	MS.gene29105	0.848408	6.25E-60	-1.69E-46
MS.gene050406	MS.gene29105	0.805375	1.38E-49	-1.69E-46
MS.gene050426	MS.gene29105	-0.806475	8.08E-50	-1.69E-46
MS.gene050432	MS.gene29105	0.834167	3.51E-56	-1.69E-46
MS.gene050464	MS.gene29105	0.866179	3.44E-65	-1.69E-46
MS.gene050529	MS.gene29105	0.854345	1.31E-61	-1.69E-46
MS.gene050558	MS.gene29105	0.829061	6.35E-55	-1.69E-46
MS.gene050593	MS.gene29105	0.812172	4.85E-51	-1.69E-46
MS.gene050650	MS.gene29105	0.812872	3.41E-51	-1.69E-46
MS.gene050670	MS.gene29105	0.888968	3.69E-73	-1.69E-46
MS.gene050783	MS.gene29105	0.805365	1.38E-49	-1.69E-46
MS.gene050812	MS.gene29105	0.800234	1.59E-48	-1.69E-46
MS.gene05101	MS.gene29105	0.878888	1.95E-69	-1.69E-46
MS.gene05105	MS.gene29105	0.844204	8.74E-59	-1.69E-46
MS.gene051387	MS.gene29105	0.870552	1.34E-66	-1.69E-46
MS.gene051471	MS.gene29105	0.836457	9.25E-57	-1.69E-46
MS.gene051525	MS.gene29105	0.850797	1.35E-60	-1.69E-46
MS.gene051582	MS.gene29105	0.879484	1.20E-69	-1.69E-46
MS.gene051663	MS.gene29105	0.818604	1.80E-52	-1.69E-46
MS.gene051666	MS.gene29105	0.810677	1.02E-50	-1.69E-46
MS.gene051692	MS.gene29105	0.82133	4.28E-53	-1.69E-46
MS.gene051860	MS.gene29105	0.867797	1.05E-65	-1.69E-46
MS.gene051877	MS.gene29105	0.846623	1.93E-59	-1.69E-46
MS.gene052011	MS.gene29105	-0.852631	4.07E-61	-1.69E-46
MS.gene052077	MS.gene29105	0.837783	4.24E-57	-1.69E-46
MS.gene052078	MS.gene29105	0.840696	7.44E-58	-1.69E-46
MS.gene052128	MS.gene29105	-0.828798	7.36E-55	-1.69E-46
MS.gene052178	MS.gene29105	0.814978	1.17E-51	-1.69E-46
MS.gene052188	MS.gene29105	0.861601	9.15E-64	-1.69E-46
MS.gene052207	MS.gene29105	0.819858	9.31E-53	-1.69E-46
MS.gene052253	MS.gene29105	0.880353	5.89E-70	-1.69E-46
MS.gene052310	MS.gene29105	0.862651	4.36E-64	-1.69E-46
MS.gene052322	MS.gene29105	0.835852	1.32E-56	-1.69E-46
MS.gene052326	MS.gene29105	0.827905	1.21E-54	-1.69E-46
MS.gene052340	MS.gene29105	0.844934	5.56E-59	-1.69E-46
MS.gene052421	MS.gene29105	0.846254	2.44E-59	-1.69E-46
MS.gene052481	MS.gene29105	0.84451	7.23E-59	-1.69E-46
MS.gene052485	MS.gene29105	0.861488	9.90E-64	-1.69E-46
MS.gene052505	MS.gene29105	0.808217	3.45E-50	-1.69E-46
MS.gene052982	MS.gene29105	0.818827	1.60E-52	-1.69E-46
MS.gene053103	MS.gene29105	0.844335	8.06E-59	-1.69E-46
MS.gene053209	MS.gene29105	0.819042	1.43E-52	-1.69E-46
MS.gene053322	MS.gene29105	0.817416	3.33E-52	-1.69E-46
MS.gene053449	MS.gene29105	0.801966	7.02E-49	-1.69E-46
MS.gene053557	MS.gene29105	0.811555	6.60E-51	-1.69E-46
MS.gene053758	MS.gene29105	0.804609	1.99E-49	-1.69E-46
MS.gene053813	MS.gene29105	0.830467	2.89E-55	-1.69E-46
MS.gene053836	MS.gene29105	0.899598	1.69E-77	-1.69E-46
MS.gene053873	MS.gene29105	0.807402	5.14E-50	-1.69E-46
MS.gene053928	MS.gene29105	0.826532	2.58E-54	-1.69E-46
MS.gene054010	MS.gene29105	0.838432	2.89E-57	-1.69E-46
MS.gene054011	MS.gene29105	0.848321	6.60E-60	-1.69E-46
MS.gene054012	MS.gene29105	0.837686	4.49E-57	-1.69E-46
MS.gene054013	MS.gene29105	0.832875	7.36E-56	-1.69E-46
MS.gene054123	MS.gene29105	0.857638	1.42E-62	-1.69E-46
MS.gene054183	MS.gene29105	0.845838	3.16E-59	-1.69E-46
MS.gene054376	MS.gene29105	0.80526	1.45E-49	-1.69E-46
MS.gene054473	MS.gene29105	0.851663	7.66E-61	-1.69E-46
MS.gene054556	MS.gene29105	0.808929	2.43E-50	-1.69E-46
MS.gene05455	MS.gene29105	0.827741	1.32E-54	-1.69E-46
MS.gene054719	MS.gene29105	0.80498	1.66E-49	-1.69E-46
MS.gene054802	MS.gene29105	0.814411	1.56E-51	-1.69E-46
MS.gene054803	MS.gene29105	0.812178	4.83E-51	-1.69E-46
MS.gene054804	MS.gene29105	0.813547	2.42E-51	-1.69E-46
MS.gene054917	MS.gene29105	0.845179	4.77E-59	-1.69E-46
MS.gene054918	MS.gene29105	0.847206	1.34E-59	-1.69E-46
MS.gene054930	MS.gene29105	0.806237	9.07E-50	-1.69E-46
MS.gene054955	MS.gene29105	0.834207	3.42E-56	-1.69E-46
MS.gene054983	MS.gene29105	0.824131	9.53E-54	-1.69E-46
MS.gene05505	MS.gene29105	0.80833	3.27E-50	-1.69E-46
MS.gene055116	MS.gene29105	0.885211	9.89E-72	-1.69E-46
MS.gene055277	MS.gene29105	0.874555	6.16E-68	-1.69E-46
MS.gene055369	MS.gene29105	0.808001	3.84E-50	-1.69E-46
MS.gene055390	MS.gene29105	0.840528	8.24E-58	-1.69E-46
MS.gene055412	MS.gene29105	0.822178	2.72E-53	-1.69E-46
MS.gene055422	MS.gene29105	0.877043	8.62E-69	-1.69E-46
MS.gene055428	MS.gene29105	0.886345	3.71E-72	-1.69E-46
MS.gene055533	MS.gene29105	0.801093	1.06E-48	-1.69E-46
MS.gene05553	MS.gene29105	0.839728	1.33E-57	-1.69E-46
MS.gene055604	MS.gene29105	0.82629	2.94E-54	-1.69E-46
MS.gene055712	MS.gene29105	0.820558	6.44E-53	-1.69E-46
MS.gene055909	MS.gene29105	0.801902	7.23E-49	-1.69E-46
MS.gene055911	MS.gene29105	0.812774	3.58E-51	-1.69E-46
MS.gene05594	MS.gene29105	0.837757	4.31E-57	-1.69E-46
MS.gene056191	MS.gene29105	0.855837	4.83E-62	-1.69E-46
MS.gene056407	MS.gene29105	0.908109	2.45E-81	-1.69E-46
MS.gene056410	MS.gene29105	0.816456	5.48E-52	-1.69E-46
MS.gene056497	MS.gene29105	0.806834	6.79E-50	-1.69E-46
MS.gene056511	MS.gene29105	0.852577	4.21E-61	-1.69E-46
MS.gene056514	MS.gene29105	0.814297	1.66E-51	-1.69E-46
MS.gene056612	MS.gene29105	0.829261	5.68E-55	-1.69E-46
MS.gene056659	MS.gene29105	0.811149	8.09E-51	-1.69E-46
MS.gene056723	MS.gene29105	0.832384	9.75E-56	-1.69E-46
MS.gene056846	MS.gene29105	0.800668	1.29E-48	-1.69E-46
MS.gene056899	MS.gene29105	-0.841463	4.68E-58	-1.69E-46
MS.gene056902	MS.gene29105	0.822372	2.45E-53	-1.69E-46
MS.gene057011	MS.gene29105	0.829335	5.45E-55	-1.69E-46
MS.gene05702	MS.gene29105	0.885029	1.16E-71	-1.69E-46
MS.gene057121	MS.gene29105	0.840725	7.31E-58	-1.69E-46
MS.gene057123	MS.gene29105	0.851347	9.42E-61	-1.69E-46
MS.gene057124	MS.gene29105	0.808852	2.53E-50	-1.69E-46
MS.gene057146	MS.gene29105	0.861548	9.50E-64	-1.69E-46
MS.gene057245	MS.gene29105	0.844453	7.49E-59	-1.69E-46
MS.gene057295	MS.gene29105	0.806041	9.97E-50	-1.69E-46
MS.gene057310	MS.gene29105	0.803758	2.99E-49	-1.69E-46
MS.gene05733	MS.gene29105	0.806038	9.99E-50	-1.69E-46
MS.gene057396	MS.gene29105	0.802672	5.02E-49	-1.69E-46
MS.gene057416	MS.gene29105	0.807895	4.04E-50	-1.69E-46
MS.gene057439	MS.gene29105	0.816295	5.95E-52	-1.69E-46
MS.gene057448	MS.gene29105	0.836315	1.01E-56	-1.69E-46
MS.gene057449	MS.gene29105	0.82251	2.28E-53	-1.69E-46
MS.gene057450	MS.gene29105	0.834116	3.61E-56	-1.69E-46
MS.gene057469	MS.gene29105	0.850826	1.32E-60	-1.69E-46
MS.gene057476	MS.gene29105	0.829906	3.96E-55	-1.69E-46
MS.gene057749	MS.gene29105	0.887383	1.50E-72	-1.69E-46
MS.gene057779	MS.gene29105	0.807635	4.59E-50	-1.69E-46
MS.gene057823	MS.gene29105	0.890011	1.45E-73	-1.69E-46
MS.gene057824	MS.gene29105	0.801942	7.10E-49	-1.69E-46
MS.gene057825	MS.gene29105	0.82909	6.25E-55	-1.69E-46
MS.gene057826	MS.gene29105	0.811811	5.81E-51	-1.69E-46
MS.gene057888	MS.gene29105	0.81971	1.01E-52	-1.69E-46
MS.gene058002	MS.gene29105	0.87073	1.17E-66	-1.69E-46
MS.gene058006	MS.gene29105	0.804658	1.94E-49	-1.69E-46
MS.gene058007	MS.gene29105	0.825667	4.14E-54	-1.69E-46
MS.gene058019	MS.gene29105	0.838247	3.22E-57	-1.69E-46
MS.gene05811	MS.gene29105	0.865257	6.73E-65	-1.69E-46
MS.gene058142	MS.gene29105	0.81974	9.91E-53	-1.69E-46
MS.gene058218	MS.gene29105	-0.806459	8.14E-50	-1.69E-46
MS.gene058233	MS.gene29105	0.838986	2.08E-57	-1.69E-46
MS.gene058276	MS.gene29105	0.813623	2.33E-51	-1.69E-46
MS.gene058293	MS.gene29105	0.867766	1.07E-65	-1.69E-46
MS.gene058376	MS.gene29105	0.807808	4.22E-50	-1.69E-46
MS.gene05842	MS.gene29105	0.801425	9.06E-49	-1.69E-46
MS.gene058444	MS.gene29105	0.801451	8.95E-49	-1.69E-46
MS.gene058660	MS.gene29105	0.897673	1.12E-76	-1.69E-46
MS.gene058700	MS.gene29105	0.826376	2.81E-54	-1.69E-46
MS.gene058710	MS.gene29105	0.814128	1.80E-51	-1.69E-46
MS.gene058787	MS.gene29105	0.823537	1.31E-53	-1.69E-46
MS.gene05886	MS.gene29105	0.867622	1.19E-65	-1.69E-46
MS.gene058928	MS.gene29105	0.842093	3.19E-58	-1.69E-46
MS.gene058949	MS.gene29105	0.806448	8.19E-50	-1.69E-46
MS.gene058995	MS.gene29105	0.852147	5.59E-61	-1.69E-46
MS.gene05907	MS.gene29105	0.901266	3.19E-78	-1.69E-46
MS.gene059082	MS.gene29105	0.83373	4.51E-56	-1.69E-46
MS.gene059141	MS.gene29105	0.855906	4.61E-62	-1.69E-46
MS.gene059285	MS.gene29105	0.834388	3.09E-56	-1.69E-46
MS.gene059294	MS.gene29105	0.821025	5.03E-53	-1.69E-46
MS.gene059366	MS.gene29105	0.818395	2.00E-52	-1.69E-46
MS.gene059420	MS.gene29105	0.889331	2.67E-73	-1.69E-46
MS.gene059462	MS.gene29105	0.845792	3.26E-59	-1.69E-46
MS.gene059518	MS.gene29105	0.816729	4.76E-52	-1.69E-46
MS.gene059536	MS.gene29105	0.842913	1.93E-58	-1.69E-46
MS.gene059597	MS.gene29105	0.890741	7.49E-74	-1.69E-46
MS.gene05959	MS.gene29105	0.823299	1.49E-53	-1.69E-46
MS.gene059676	MS.gene29105	0.870107	1.87E-66	-1.69E-46
MS.gene059688	MS.gene29105	0.895178	1.23E-75	-1.69E-46
MS.gene059692	MS.gene29105	0.881094	3.19E-70	-1.69E-46
MS.gene059695	MS.gene29105	0.884226	2.30E-71	-1.69E-46
MS.gene059711	MS.gene29105	0.804977	1.67E-49	-1.69E-46
MS.gene059807	MS.gene29105	0.833131	6.36E-56	-1.69E-46
MS.gene05984	MS.gene29105	0.856285	3.57E-62	-1.69E-46
MS.gene059876	MS.gene29105	0.832084	1.16E-55	-1.69E-46
MS.gene059894	MS.gene29105	0.830235	3.29E-55	-1.69E-46
MS.gene059960	MS.gene29105	0.818453	1.95E-52	-1.69E-46
MS.gene06037	MS.gene29105	0.829429	5.17E-55	-1.69E-46
MS.gene060403	MS.gene29105	0.893034	9.15E-75	-1.69E-46
MS.gene060495	MS.gene29105	0.801437	9.01E-49	-1.69E-46
MS.gene060559	MS.gene29105	0.807519	4.86E-50	-1.69E-46
MS.gene060804	MS.gene29105	0.816681	4.88E-52	-1.69E-46
MS.gene060837	MS.gene29105	0.829517	4.92E-55	-1.69E-46
MS.gene06090	MS.gene29105	0.828319	9.60E-55	-1.69E-46
MS.gene060986	MS.gene29105	0.817775	2.77E-52	-1.69E-46
MS.gene061049	MS.gene29105	0.879994	7.90E-70	-1.69E-46
MS.gene061051	MS.gene29105	-0.852307	5.03E-61	-1.69E-46
MS.gene061154	MS.gene29105	0.830427	2.95E-55	-1.69E-46
MS.gene061159	MS.gene29105	0.840252	9.72E-58	-1.69E-46
MS.gene061200	MS.gene29105	0.825696	4.07E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29105.t1	MTR_3g073140	98.795	166	2	1	166	1	166	1.72e-119	334
MS.gene29105.t1	MTR_4g081120	47.727	132	69	21	152	34	165	6.99e-35	120
MS.gene29105.t1	MTR_4g081120	53.000	100	47	53	152	46	145	2.84e-34	118

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29105.t1	AT5G14320	70.513	156	41	2	1	153	1	154	1.42e-76	226
MS.gene29105.t1	AT5G14320	62.069	116	39	2	1	113	1	114	2.91e-44	142
MS.gene29105.t1	AT1G77750	48.387	124	64	0	42	165	27	150	1.66e-37	126

Find 38 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATGTCCTGCAGTTATTCT+TGG	0.227656	3.2:+65972258	None:intergenic
AATTCAATTCTCTTGTTGTT+TGG	0.264258	3.2:+65972628	None:intergenic
CAGAGGAATAAGGCATATTC+AGG	0.285946	3.2:-65972305	MS.gene29105:CDS
AATTGTGTTACCTTTGACTT+TGG	0.293488	3.2:+65972757	None:intergenic
GGTAAGAAGGTTACTGTTGC+TGG	0.360552	3.2:-65972232	MS.gene29105:CDS
GACTTTGGAGTGTTGAGAAC+TGG	0.363379	3.2:+65972772	None:intergenic
TTCAGTGTTACAGAGGAATA+AGG	0.379843	3.2:-65972315	MS.gene29105:CDS
AAGAAGAGCTTATTAGTCTC+AGG	0.387619	3.2:-65972510	MS.gene29105:CDS
ATACATGACTGAAGGAGATT+TGG	0.390225	3.2:-65972473	MS.gene29105:intron
GGAGAAGTGACCATGGCCTT+TGG	0.397280	3.2:+65972810	None:intergenic
GATTCTAACTGATATCAGTA+TGG	0.462554	3.2:-65972560	MS.gene29105:CDS
TTGCAGTACATTCATGGAGT+TGG	0.465952	3.2:-65972601	MS.gene29105:CDS
TTAATGCACTTAATATAAAG+AGG	0.487114	3.2:-65972348	MS.gene29105:CDS
AACTGGGAAAGAAACTCGAT+TGG	0.508056	3.2:+65972789	None:intergenic
GAATAACTGCAGGACATTGA+AGG	0.525777	3.2:-65972254	MS.gene29105:CDS
CAGGACATTGAAGGGTAAGA+AGG	0.533951	3.2:-65972245	MS.gene29105:CDS
ATTGTGTGCGTTCGTGTTGG+TGG	0.534997	3.2:-65972661	MS.gene29105:CDS
AATAACTGCAGGACATTGAA+GGG	0.550619	3.2:-65972253	MS.gene29105:CDS
ATTGAGAGTGAAGGTGCCAC+AGG	0.552065	3.2:+65972838	None:intergenic
ACTTTGGAGTGTTGAGAACT+GGG	0.555353	3.2:+65972773	None:intergenic
AACATTGTGTGCGTTCGTGT+TGG	0.564683	3.2:-65972664	MS.gene29105:CDS
TGATTGAATTGTAGGTTCAG+AGG	0.566135	3.2:-65972690	MS.gene29105:intron
TCAATCATCTCCAAAGGCCA+TGG	0.572793	3.2:-65972820	MS.gene29105:CDS
GTGCGTTCGTGTTGGTGGTG+TGG	0.576835	3.2:-65972656	MS.gene29105:CDS
TTGGTACGCTGTCCTCTACA+AGG	0.578588	3.2:+65972277	None:intergenic
AGAGGAATAAGGCATATTCA+GGG	0.580912	3.2:-65972304	MS.gene29105:CDS
TCTCAACACTCCAAAGTCAA+AGG	0.589008	3.2:-65972767	MS.gene29105:intron
GTTAACAAATACATGACTGA+AGG	0.596392	3.2:-65972481	MS.gene29105:CDS
TATGGAGAATAAAGTTACAA+AGG	0.597785	3.2:-65972542	MS.gene29105:CDS
AAAGAAATTCAGTGTTACAG+AGG	0.605461	3.2:-65972322	MS.gene29105:CDS
TCACTCTCAATCATCTCCAA+AGG	0.619107	3.2:-65972826	MS.gene29105:CDS
ATTCAGGGACTTCCTTGTAG+AGG	0.621863	3.2:-65972289	MS.gene29105:CDS
AGTACATTCATGGAGTTGGA+AGG	0.622828	3.2:-65972597	MS.gene29105:CDS
AGCGTACCAAGAATAACTGC+AGG	0.623820	3.2:-65972264	MS.gene29105:CDS
AGAAGAGCTTATTAGTCTCA+GGG	0.625713	3.2:-65972509	MS.gene29105:CDS
CTCGATTGGAGAAGTGACCA+TGG	0.660409	3.2:+65972803	None:intergenic
TTGGAGATGATTGAGAGTGA+AGG	0.661623	3.2:+65972829	None:intergenic
ACAAACACTCTCAATGCCTG+TGG	0.676701	3.2:-65972854	MS.gene29105:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTGTTTTGTAATTGTAA+TGG	-	chr3.2:65972674-65972693	MS.gene29105:CDS	15.0%
!!	TTAATGCACTTAATATAAAG+AGG	-	chr3.2:65972727-65972746	MS.gene29105:intron	20.0%
!	TATGGAGAATAAAGTTACAA+AGG	-	chr3.2:65972533-65972552	MS.gene29105:CDS	25.0%
!!!	AATTCAATTCTCTTGTTGTT+TGG	+	chr3.2:65972450-65972469	None:intergenic	25.0%
	AAAGAAATTCAGTGTTACAG+AGG	-	chr3.2:65972753-65972772	MS.gene29105:intron	30.0%
	AAGTCAAAGGTAACACAATT+AGG	-	chr3.2:65972321-65972340	MS.gene29105:CDS	30.0%
	AGTCAAAGGTAACACAATTA+GGG	-	chr3.2:65972322-65972341	MS.gene29105:CDS	30.0%
	ATCAGAATCAGAATGGAATT+TGG	+	chr3.2:65972369-65972388	None:intergenic	30.0%
	CAATTCAATCAGAATCAGAA+TGG	+	chr3.2:65972376-65972395	None:intergenic	30.0%
	GATTCTAACTGATATCAGTA+TGG	-	chr3.2:65972515-65972534	MS.gene29105:CDS	30.0%
	GTTAACAAATACATGACTGA+AGG	-	chr3.2:65972594-65972613	MS.gene29105:CDS	30.0%
	TCTGATTCTGATTGAATTGT+AGG	-	chr3.2:65972377-65972396	MS.gene29105:intron	30.0%
	TTGTTTGTGAATTTCAGAGA+AGG	-	chr3.2:65972703-65972722	MS.gene29105:intron	30.0%
!	AATTGTGTTACCTTTGACTT+TGG	+	chr3.2:65972321-65972340	None:intergenic	30.0%
	AATAACTGCAGGACATTGAA+GGG	-	chr3.2:65972822-65972841	MS.gene29105:CDS	35.0%
	AGAGGAATAAGGCATATTCA+GGG	-	chr3.2:65972771-65972790	MS.gene29105:CDS	35.0%
	ATACATGACTGAAGGAGATT+TGG	-	chr3.2:65972602-65972621	MS.gene29105:CDS	35.0%
	TGATTGAATTGTAGGTTCAG+AGG	-	chr3.2:65972385-65972404	MS.gene29105:intron	35.0%
	TTCAGTGTTACAGAGGAATA+AGG	-	chr3.2:65972760-65972779	MS.gene29105:intron	35.0%
!	AAGAAGAGCTTATTAGTCTC+AGG	-	chr3.2:65972565-65972584	MS.gene29105:CDS	35.0%
!	AGAAGAGCTTATTAGTCTCA+GGG	-	chr3.2:65972566-65972585	MS.gene29105:CDS	35.0%
!	TTTTCGTTGCAGTACATTCA+TGG	-	chr3.2:65972468-65972487	MS.gene29105:intron	35.0%
	AACTGGGAAAGAAACTCGAT+TGG	+	chr3.2:65972289-65972308	None:intergenic	40.0%
	AGTACATTCATGGAGTTGGA+AGG	-	chr3.2:65972478-65972497	MS.gene29105:CDS	40.0%
	CAATGTCCTGCAGTTATTCT+TGG	+	chr3.2:65972820-65972839	None:intergenic	40.0%
	CAGAGGAATAAGGCATATTC+AGG	-	chr3.2:65972770-65972789	MS.gene29105:CDS	40.0%
	GAATAACTGCAGGACATTGA+AGG	-	chr3.2:65972821-65972840	MS.gene29105:CDS	40.0%
	TCACTCTCAATCATCTCCAA+AGG	-	chr3.2:65972249-65972268	MS.gene29105:CDS	40.0%
	TCTCAACACTCCAAAGTCAA+AGG	-	chr3.2:65972308-65972327	MS.gene29105:CDS	40.0%
	TTGCAGTACATTCATGGAGT+TGG	-	chr3.2:65972474-65972493	MS.gene29105:CDS	40.0%
	TTGGAGATGATTGAGAGTGA+AGG	+	chr3.2:65972249-65972268	None:intergenic	40.0%
!!	ACTTTGGAGTGTTGAGAACT+GGG	+	chr3.2:65972305-65972324	None:intergenic	40.0%
	AACATTGTGTGCGTTCGTGT+TGG	-	chr3.2:65972411-65972430	MS.gene29105:intron	45.0%
	ACAAACACTCTCAATGCCTG+TGG	-	chr3.2:65972221-65972240	MS.gene29105:CDS	45.0%
	AGCGTACCAAGAATAACTGC+AGG	-	chr3.2:65972811-65972830	MS.gene29105:CDS	45.0%
	ATTCAGGGACTTCCTTGTAG+AGG	-	chr3.2:65972786-65972805	MS.gene29105:CDS	45.0%
	CAGGACATTGAAGGGTAAGA+AGG	-	chr3.2:65972830-65972849	MS.gene29105:CDS	45.0%
	GGTAAGAAGGTTACTGTTGC+TGG	-	chr3.2:65972843-65972862	MS.gene29105:CDS	45.0%
	TCAATCATCTCCAAAGGCCA+TGG	-	chr3.2:65972255-65972274	MS.gene29105:CDS	45.0%
!!	GACTTTGGAGTGTTGAGAAC+TGG	+	chr3.2:65972306-65972325	None:intergenic	45.0%
	ATTGTGTGCGTTCGTGTTGG+TGG	-	chr3.2:65972414-65972433	MS.gene29105:intron	50.0%
	CTCGATTGGAGAAGTGACCA+TGG	+	chr3.2:65972275-65972294	None:intergenic	50.0%
	TTGGTACGCTGTCCTCTACA+AGG	+	chr3.2:65972801-65972820	None:intergenic	50.0%
!!	ATTGAGAGTGAAGGTGCCAC+AGG	+	chr3.2:65972240-65972259	None:intergenic	50.0%
	GGAGAAGTGACCATGGCCTT+TGG	+	chr3.2:65972268-65972287	None:intergenic	55.0%
!!	GTGCGTTCGTGTTGGTGGTG+TGG	-	chr3.2:65972419-65972438	MS.gene29105:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	65972216	65972881	65972216	ID=MS.gene29105
chr3.2	mRNA	65972216	65972881	65972216	ID=MS.gene29105.t1;Parent=MS.gene29105
chr3.2	exon	65972768	65972881	65972768	ID=MS.gene29105.t1.exon1;Parent=MS.gene29105.t1
chr3.2	CDS	65972768	65972881	65972768	ID=cds.MS.gene29105.t1;Parent=MS.gene29105.t1
chr3.2	exon	65972474	65972698	65972474	ID=MS.gene29105.t1.exon2;Parent=MS.gene29105.t1
chr3.2	CDS	65972474	65972698	65972474	ID=cds.MS.gene29105.t1;Parent=MS.gene29105.t1
chr3.2	exon	65972216	65972377	65972216	ID=MS.gene29105.t1.exon3;Parent=MS.gene29105.t1
chr3.2	CDS	65972216	65972377	65972216	ID=cds.MS.gene29105.t1;Parent=MS.gene29105.t1

Gene Sequence

>MS.gene29105

ATGGTACAAACACTCTCAATGCCTGTGGCACCTTCACTCTCAATCATCTCCAAAGGCCATGGTCACTTCTCCAATCGAGTTTCTTTCCCAGTTCTCAACACTCCAAAGTCAAAGGTAACACAATTAGGGTTTCAAAATTCAAGATAAATTCCAAATTCCATTCTGATTCTGATTGAATTGTAGGTTCAGAGGCTAAACATTGTGTGCGTTCGTGTTGGTGGTGTGGAAATTCCAAACAACAAGAGAATTGAATTTTCGTTGCAGTACATTCATGGAGTTGGAAGGAACAGAGCTAGACAGATTCTAACTGATATCAGTATGGAGAATAAAGTTACAAAGGAATTGAGTGAAGAAGAGCTTATTAGTCTCAGGGATGAAGTTAACAAATACATGACTGAAGGAGATTTGGTAATAAAAAAAATTAAAAATCTCATTTTTTTTGTTTTTTGTTTTCTATTATTTTGTTTTGTAATTGTAATGGTTTGATTTGTTTGTGAATTTCAGAGAAGGTTTAATGCACTTAATATAAAGAGGTTGAAAGAAATTCAGTGTTACAGAGGAATAAGGCATATTCAGGGACTTCCTTGTAGAGGACAGCGTACCAAGAATAACTGCAGGACATTGAAGGGTAAGAAGGTTACTGTTGCTGGAAAGAAGAAAAAGTAA

Protein sequence

>MS.gene29105.t1

MVQTLSMPVAPSLSIISKGHGHFSNRVSFPVLNTPKSKVQRLNIVCVRVGGVEIPNNKRIEFSLQYIHGVGRNRARQILTDISMENKVTKELSEEELISLRDEVNKYMTEGDLRRFNALNIKRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVTVAGKKKK