Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79624.t1 | XP_024626190.1 | 95.7 | 539 | 23 | 0 | 1 | 539 | 1 | 539 | 1.20E-285 | 991.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79624.t1 | P77931 | 25.8 | 485 | 282 | 17 | 35 | 496 | 147 | 576 | 4.3e-34 | 147.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79624.t1 | A2Q5S2 | 95.7 | 539 | 23 | 0 | 1 | 539 | 1 | 539 | 8.5e-286 | 991.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene79624 | -0.830531 | 2.79E-55 | -1.69E-46 |
MS.gene049217 | MS.gene79624 | -0.800364 | 1.49E-48 | -1.69E-46 |
MS.gene049222 | MS.gene79624 | -0.826754 | 2.28E-54 | -1.69E-46 |
MS.gene049232 | MS.gene79624 | -0.803756 | 3.00E-49 | -1.69E-46 |
MS.gene049320 | MS.gene79624 | -0.815632 | 8.37E-52 | -1.69E-46 |
MS.gene04932 | MS.gene79624 | 0.800591 | 1.34E-48 | -1.69E-46 |
MS.gene049549 | MS.gene79624 | 0.854927 | 8.89E-62 | -1.69E-46 |
MS.gene049609 | MS.gene79624 | -0.813468 | 2.52E-51 | -1.69E-46 |
MS.gene049611 | MS.gene79624 | 0.827768 | 1.30E-54 | -1.69E-46 |
MS.gene049633 | MS.gene79624 | -0.845538 | 3.82E-59 | -1.69E-46 |
MS.gene049634 | MS.gene79624 | 0.851504 | 8.50E-61 | -1.69E-46 |
MS.gene050095 | MS.gene79624 | 0.823005 | 1.75E-53 | -1.69E-46 |
MS.gene050096 | MS.gene79624 | 0.814873 | 1.23E-51 | -1.69E-46 |
MS.gene050163 | MS.gene79624 | -0.80214 | 6.46E-49 | -1.69E-46 |
MS.gene050165 | MS.gene79624 | -0.805123 | 1.55E-49 | -1.69E-46 |
MS.gene050170 | MS.gene79624 | -0.829799 | 4.21E-55 | -1.69E-46 |
MS.gene050323 | MS.gene79624 | -0.813824 | 2.10E-51 | -1.69E-46 |
MS.gene050333 | MS.gene79624 | -0.812135 | 4.94E-51 | -1.69E-46 |
MS.gene050338 | MS.gene79624 | 0.812889 | 3.38E-51 | -1.69E-46 |
MS.gene050381 | MS.gene79624 | 0.815678 | 8.17E-52 | -1.69E-46 |
MS.gene050444 | MS.gene79624 | -0.80374 | 3.02E-49 | -1.69E-46 |
MS.gene050496 | MS.gene79624 | -0.815204 | 1.04E-51 | -1.69E-46 |
MS.gene050504 | MS.gene79624 | -0.832273 | 1.04E-55 | -1.69E-46 |
MS.gene050518 | MS.gene79624 | -0.800309 | 1.53E-48 | -1.69E-46 |
MS.gene050577 | MS.gene79624 | -0.819399 | 1.19E-52 | -1.69E-46 |
MS.gene050612 | MS.gene79624 | -0.844295 | 8.26E-59 | -1.69E-46 |
MS.gene050647 | MS.gene79624 | 0.811494 | 6.81E-51 | -1.69E-46 |
MS.gene050675 | MS.gene79624 | -0.841269 | 5.27E-58 | -1.69E-46 |
MS.gene050699 | MS.gene79624 | -0.812168 | 4.86E-51 | -1.69E-46 |
MS.gene050720 | MS.gene79624 | 0.808339 | 3.25E-50 | -1.69E-46 |
MS.gene050772 | MS.gene79624 | -0.825791 | 3.87E-54 | -1.69E-46 |
MS.gene05079 | MS.gene79624 | 0.824504 | 7.79E-54 | -1.69E-46 |
MS.gene050809 | MS.gene79624 | 0.806221 | 9.14E-50 | -1.69E-46 |
MS.gene05080 | MS.gene79624 | -0.822359 | 2.47E-53 | -1.69E-46 |
MS.gene050868 | MS.gene79624 | -0.833484 | 5.20E-56 | -1.69E-46 |
MS.gene050871 | MS.gene79624 | -0.831258 | 1.85E-55 | -1.69E-46 |
MS.gene050904 | MS.gene79624 | -0.811888 | 5.59E-51 | -1.69E-46 |
MS.gene050950 | MS.gene79624 | -0.804774 | 1.84E-49 | -1.69E-46 |
MS.gene050986 | MS.gene79624 | -0.809356 | 1.97E-50 | -1.69E-46 |
MS.gene051044 | MS.gene79624 | 0.813834 | 2.09E-51 | -1.69E-46 |
MS.gene05104 | MS.gene79624 | 0.843144 | 1.68E-58 | -1.69E-46 |
MS.gene051127 | MS.gene79624 | 0.816422 | 5.57E-52 | -1.69E-46 |
MS.gene051131 | MS.gene79624 | 0.818881 | 1.55E-52 | -1.69E-46 |
MS.gene051138 | MS.gene79624 | 0.856383 | 3.34E-62 | -1.69E-46 |
MS.gene051268 | MS.gene79624 | -0.811308 | 7.47E-51 | -1.69E-46 |
MS.gene051317 | MS.gene79624 | -0.820617 | 6.24E-53 | -1.69E-46 |
MS.gene051364 | MS.gene79624 | 0.820336 | 7.24E-53 | -1.69E-46 |
MS.gene051366 | MS.gene79624 | 0.815456 | 9.16E-52 | -1.69E-46 |
MS.gene051422 | MS.gene79624 | 0.80985 | 1.54E-50 | -1.69E-46 |
MS.gene051632 | MS.gene79624 | 0.811182 | 7.96E-51 | -1.69E-46 |
MS.gene051651 | MS.gene79624 | 0.836872 | 7.25E-57 | -1.69E-46 |
MS.gene051749 | MS.gene79624 | 0.811974 | 5.35E-51 | -1.69E-46 |
MS.gene051810 | MS.gene79624 | -0.803123 | 4.05E-49 | -1.69E-46 |
MS.gene051858 | MS.gene79624 | -0.801082 | 1.06E-48 | -1.69E-46 |
MS.gene051863 | MS.gene79624 | 0.819711 | 1.01E-52 | -1.69E-46 |
MS.gene051874 | MS.gene79624 | -0.808267 | 3.37E-50 | -1.69E-46 |
MS.gene051907 | MS.gene79624 | 0.810995 | 8.74E-51 | -1.69E-46 |
MS.gene052164 | MS.gene79624 | -0.815467 | 9.11E-52 | -1.69E-46 |
MS.gene052211 | MS.gene79624 | 0.82562 | 4.24E-54 | -1.69E-46 |
MS.gene05240 | MS.gene79624 | 0.830648 | 2.61E-55 | -1.69E-46 |
MS.gene05244 | MS.gene79624 | 0.834225 | 3.39E-56 | -1.69E-46 |
MS.gene052486 | MS.gene79624 | -0.803059 | 4.18E-49 | -1.69E-46 |
MS.gene052606 | MS.gene79624 | 0.855897 | 4.63E-62 | -1.69E-46 |
MS.gene052702 | MS.gene79624 | 0.801425 | 9.06E-49 | -1.69E-46 |
MS.gene052805 | MS.gene79624 | 0.809805 | 1.58E-50 | -1.69E-46 |
MS.gene052966 | MS.gene79624 | -0.811716 | 6.09E-51 | -1.69E-46 |
MS.gene053030 | MS.gene79624 | 0.810416 | 1.17E-50 | -1.69E-46 |
MS.gene053031 | MS.gene79624 | 0.835377 | 1.74E-56 | -1.69E-46 |
MS.gene053033 | MS.gene79624 | 0.812652 | 3.81E-51 | -1.69E-46 |
MS.gene053203 | MS.gene79624 | -0.828142 | 1.06E-54 | -1.69E-46 |
MS.gene053403 | MS.gene79624 | 0.804558 | 2.04E-49 | -1.69E-46 |
MS.gene053406 | MS.gene79624 | 0.838912 | 2.17E-57 | -1.69E-46 |
MS.gene053420 | MS.gene79624 | 0.847525 | 1.09E-59 | -1.69E-46 |
MS.gene053479 | MS.gene79624 | -0.810417 | 1.16E-50 | -1.69E-46 |
MS.gene053488 | MS.gene79624 | 0.81675 | 4.71E-52 | -1.69E-46 |
MS.gene053574 | MS.gene79624 | -0.811536 | 6.67E-51 | -1.69E-46 |
MS.gene053824 | MS.gene79624 | -0.806493 | 8.01E-50 | -1.69E-46 |
MS.gene053887 | MS.gene79624 | 0.852049 | 5.96E-61 | -1.69E-46 |
MS.gene053916 | MS.gene79624 | -0.800408 | 1.46E-48 | -1.69E-46 |
MS.gene054146 | MS.gene79624 | 0.828952 | 6.75E-55 | -1.69E-46 |
MS.gene054181 | MS.gene79624 | 0.847296 | 1.27E-59 | -1.69E-46 |
MS.gene054290 | MS.gene79624 | 0.803754 | 3.00E-49 | -1.69E-46 |
MS.gene054595 | MS.gene79624 | -0.806273 | 8.91E-50 | -1.69E-46 |
MS.gene054642 | MS.gene79624 | -0.802773 | 4.78E-49 | -1.69E-46 |
MS.gene054706 | MS.gene79624 | 0.840162 | 1.03E-57 | -1.69E-46 |
MS.gene054707 | MS.gene79624 | 0.820608 | 6.27E-53 | -1.69E-46 |
MS.gene05470 | MS.gene79624 | -0.828994 | 6.60E-55 | -1.69E-46 |
MS.gene054742 | MS.gene79624 | 0.811839 | 5.73E-51 | -1.69E-46 |
MS.gene05483 | MS.gene79624 | 0.832747 | 7.92E-56 | -1.69E-46 |
MS.gene054884 | MS.gene79624 | 0.824942 | 6.14E-54 | -1.69E-46 |
MS.gene054954 | MS.gene79624 | -0.801943 | 7.09E-49 | -1.69E-46 |
MS.gene055124 | MS.gene79624 | 0.815287 | 9.99E-52 | -1.69E-46 |
MS.gene055154 | MS.gene79624 | 0.83476 | 2.49E-56 | -1.69E-46 |
MS.gene055158 | MS.gene79624 | 0.808369 | 3.20E-50 | -1.69E-46 |
MS.gene055202 | MS.gene79624 | 0.81405 | 1.88E-51 | -1.69E-46 |
MS.gene055206 | MS.gene79624 | -0.821259 | 4.44E-53 | -1.69E-46 |
MS.gene055240 | MS.gene79624 | 0.838509 | 2.76E-57 | -1.69E-46 |
MS.gene055362 | MS.gene79624 | -0.809144 | 2.19E-50 | -1.69E-46 |
MS.gene055502 | MS.gene79624 | -0.834221 | 3.40E-56 | -1.69E-46 |
MS.gene055577 | MS.gene79624 | -0.830674 | 2.57E-55 | -1.69E-46 |
MS.gene055748 | MS.gene79624 | -0.826277 | 2.96E-54 | -1.69E-46 |
MS.gene055750 | MS.gene79624 | -0.815047 | 1.13E-51 | -1.69E-46 |
MS.gene055751 | MS.gene79624 | -0.827784 | 1.29E-54 | -1.69E-46 |
MS.gene05589 | MS.gene79624 | -0.853658 | 2.07E-61 | -1.69E-46 |
MS.gene055942 | MS.gene79624 | 0.806907 | 6.55E-50 | -1.69E-46 |
MS.gene055959 | MS.gene79624 | 0.809084 | 2.25E-50 | -1.69E-46 |
MS.gene056218 | MS.gene79624 | 0.82076 | 5.79E-53 | -1.69E-46 |
MS.gene056224 | MS.gene79624 | 0.843843 | 1.09E-58 | -1.69E-46 |
MS.gene056359 | MS.gene79624 | 0.80827 | 3.36E-50 | -1.69E-46 |
MS.gene056387 | MS.gene79624 | -0.806522 | 7.90E-50 | -1.69E-46 |
MS.gene056504 | MS.gene79624 | -0.843206 | 1.62E-58 | -1.69E-46 |
MS.gene056549 | MS.gene79624 | -0.804129 | 2.50E-49 | -1.69E-46 |
MS.gene056590 | MS.gene79624 | 0.876726 | 1.11E-68 | -1.69E-46 |
MS.gene056591 | MS.gene79624 | 0.874679 | 5.59E-68 | -1.69E-46 |
MS.gene056657 | MS.gene79624 | -0.806814 | 6.85E-50 | -1.69E-46 |
MS.gene056692 | MS.gene79624 | -0.815302 | 9.91E-52 | -1.69E-46 |
MS.gene056694 | MS.gene79624 | 0.816437 | 5.53E-52 | -1.69E-46 |
MS.gene056697 | MS.gene79624 | 0.822044 | 2.92E-53 | -1.69E-46 |
MS.gene056748 | MS.gene79624 | 0.835222 | 1.90E-56 | -1.69E-46 |
MS.gene056856 | MS.gene79624 | 0.881832 | 1.73E-70 | -1.69E-46 |
MS.gene057261 | MS.gene79624 | 0.823009 | 1.74E-53 | -1.69E-46 |
MS.gene057544 | MS.gene79624 | 0.842343 | 2.74E-58 | -1.69E-46 |
MS.gene057547 | MS.gene79624 | 0.809351 | 1.97E-50 | -1.69E-46 |
MS.gene057549 | MS.gene79624 | 0.80939 | 1.94E-50 | -1.69E-46 |
MS.gene057768 | MS.gene79624 | 0.840918 | 6.51E-58 | -1.69E-46 |
MS.gene057831 | MS.gene79624 | -0.803999 | 2.67E-49 | -1.69E-46 |
MS.gene058093 | MS.gene79624 | 0.815251 | 1.02E-51 | -1.69E-46 |
MS.gene058099 | MS.gene79624 | 0.847294 | 1.27E-59 | -1.69E-46 |
MS.gene058109 | MS.gene79624 | 0.834894 | 2.30E-56 | -1.69E-46 |
MS.gene058111 | MS.gene79624 | 0.831076 | 2.05E-55 | -1.69E-46 |
MS.gene058117 | MS.gene79624 | 0.823194 | 1.58E-53 | -1.69E-46 |
MS.gene058171 | MS.gene79624 | 0.840247 | 9.75E-58 | -1.69E-46 |
MS.gene058173 | MS.gene79624 | 0.834385 | 3.09E-56 | -1.69E-46 |
MS.gene058175 | MS.gene79624 | 0.845495 | 3.92E-59 | -1.69E-46 |
MS.gene058268 | MS.gene79624 | 0.801199 | 1.01E-48 | -1.69E-46 |
MS.gene058334 | MS.gene79624 | 0.840803 | 6.98E-58 | -1.69E-46 |
MS.gene058338 | MS.gene79624 | -0.806706 | 7.22E-50 | -1.69E-46 |
MS.gene05837 | MS.gene79624 | -0.828804 | 7.33E-55 | -1.69E-46 |
MS.gene058419 | MS.gene79624 | -0.828913 | 6.90E-55 | -1.69E-46 |
MS.gene058544 | MS.gene79624 | -0.821591 | 3.72E-53 | -1.69E-46 |
MS.gene058603 | MS.gene79624 | 0.846151 | 2.60E-59 | -1.69E-46 |
MS.gene058723 | MS.gene79624 | -0.803403 | 3.55E-49 | -1.69E-46 |
MS.gene058773 | MS.gene79624 | -0.805732 | 1.16E-49 | -1.69E-46 |
MS.gene058838 | MS.gene79624 | -0.835931 | 1.26E-56 | -1.69E-46 |
MS.gene059022 | MS.gene79624 | -0.816381 | 5.69E-52 | -1.69E-46 |
MS.gene059023 | MS.gene79624 | -0.823187 | 1.59E-53 | -1.69E-46 |
MS.gene059037 | MS.gene79624 | 0.813767 | 2.17E-51 | -1.69E-46 |
MS.gene059045 | MS.gene79624 | 0.818744 | 1.67E-52 | -1.69E-46 |
MS.gene059402 | MS.gene79624 | 0.823501 | 1.34E-53 | -1.69E-46 |
MS.gene059526 | MS.gene79624 | 0.81083 | 9.48E-51 | -1.69E-46 |
MS.gene059677 | MS.gene79624 | -0.822877 | 1.87E-53 | -1.69E-46 |
MS.gene059718 | MS.gene79624 | -0.807477 | 4.96E-50 | -1.69E-46 |
MS.gene059756 | MS.gene79624 | -0.802985 | 4.33E-49 | -1.69E-46 |
MS.gene059865 | MS.gene79624 | -0.843475 | 1.37E-58 | -1.69E-46 |
MS.gene059953 | MS.gene79624 | 0.828409 | 9.14E-55 | -1.69E-46 |
MS.gene059955 | MS.gene79624 | 0.844993 | 5.36E-59 | -1.69E-46 |
MS.gene06000 | MS.gene79624 | -0.81556 | 8.68E-52 | -1.69E-46 |
MS.gene060405 | MS.gene79624 | 0.839953 | 1.16E-57 | -1.69E-46 |
MS.gene060593 | MS.gene79624 | 0.815655 | 8.27E-52 | -1.69E-46 |
MS.gene060595 | MS.gene79624 | 0.80398 | 2.69E-49 | -1.69E-46 |
MS.gene060762 | MS.gene79624 | -0.847788 | 9.26E-60 | -1.69E-46 |
MS.gene060778 | MS.gene79624 | -0.813845 | 2.08E-51 | -1.69E-46 |
MS.gene06077 | MS.gene79624 | -0.82157 | 3.76E-53 | -1.69E-46 |
MS.gene060823 | MS.gene79624 | 0.810995 | 8.73E-51 | -1.69E-46 |
MS.gene06084 | MS.gene79624 | 0.800741 | 1.25E-48 | -1.69E-46 |
MS.gene060982 | MS.gene79624 | -0.836419 | 9.46E-57 | -1.69E-46 |
MS.gene061044 | MS.gene79624 | 0.818377 | 2.02E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79624.t1 | MTR_7g009820 | 94.766 | 535 | 28 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1009 |
MS.gene79624.t1 | MTR_7g009780 | 65.981 | 535 | 173 | 6 | 7 | 539 | 1 | 528 | 0.0 | 692 |
MS.gene79624.t1 | MTR_7g009760 | 47.826 | 253 | 103 | 5 | 11 | 239 | 5 | 252 | 4.35e-69 | 225 |
MS.gene79624.t1 | MTR_7g009760 | 43.462 | 260 | 120 | 6 | 300 | 539 | 74 | 326 | 1.92e-51 | 179 |
MS.gene79624.t1 | MTR_7g009830 | 60.811 | 74 | 28 | 1 | 439 | 511 | 1 | 74 | 4.37e-20 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 123 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAACCCTGATGCTGATTT+TGG | 0.132899 | 7.3:-88326878 | MS.gene79624:CDS |
GATCAAATGGTGATTTAATT+TGG | 0.135791 | 7.3:-88328989 | MS.gene79624:CDS |
CTGAAGAATGTTGCACCTTT+AGG | 0.214252 | 7.3:-88327294 | MS.gene79624:CDS |
CTGGGTTTGGCAACGGTTAT+TGG | 0.236274 | 7.3:-88325836 | MS.gene79624:CDS |
TGTACAATGGTGAAATTAAA+TGG | 0.237277 | 7.3:-88326976 | MS.gene79624:CDS |
AATATTCTGGTGGAGCTATA+TGG | 0.264475 | 7.3:-88327186 | MS.gene79624:CDS |
TTCCAGTGGCAATGTATATA+TGG | 0.265099 | 7.3:+88327131 | None:intergenic |
CCATTAGCAGTTGCATTACT+AGG | 0.279759 | 7.3:+88326034 | None:intergenic |
TGAAGAATGTTGCACCTTTA+GGG | 0.287178 | 7.3:-88327293 | MS.gene79624:CDS |
CTAAAGGTGCAACATTCTTC+AGG | 0.312921 | 7.3:+88327295 | None:intergenic |
ATTAAATGGTACCATCAATT+AGG | 0.316692 | 7.3:-88326962 | MS.gene79624:CDS |
AACATGTTAGTGAGCATAAT+AGG | 0.318568 | 7.3:+88330089 | None:intergenic |
GATAGGTCCTTTCTTATTTG+TGG | 0.326651 | 7.3:+88325973 | None:intergenic |
ACATCAATTGTGAGCATCAT+TGG | 0.339785 | 7.3:+88326848 | None:intergenic |
ACGGTTATTGGAGGCCTTAC+TGG | 0.340046 | 7.3:-88325824 | MS.gene79624:CDS |
AACAATGGTTGCATATATCT+TGG | 0.341143 | 7.3:-88325872 | MS.gene79624:CDS |
GCTGGACCTGGTGGAATTGC+AGG | 0.341429 | 7.3:-88326223 | MS.gene79624:CDS |
TTTAATTTGGCAAACTCGTT+TGG | 0.341763 | 7.3:-88328976 | MS.gene79624:CDS |
AAGAATTTGACAAAATTAAC+TGG | 0.351167 | 7.3:-88329140 | MS.gene79624:CDS |
TCAAAGCTAGATATTAAATC+TGG | 0.351376 | 7.3:-88327262 | MS.gene79624:CDS |
ATGCTCACAATTGATGTAAA+TGG | 0.353186 | 7.3:-88326842 | MS.gene79624:CDS |
GCTAATGGCATTGTCTTTGC+AGG | 0.354990 | 7.3:-88325998 | MS.gene79624:CDS |
GCTAGTGTTGTCACTATGTC+TGG | 0.358082 | 7.3:-88328942 | MS.gene79624:CDS |
AAATTGATGGAACTCTTGTT+TGG | 0.366671 | 7.3:-88329166 | MS.gene79624:CDS |
TTTCTTGATGCATCAATTGA+TGG | 0.366714 | 7.3:+88327154 | None:intergenic |
GGACAGAAAAGGAACAAAAT+TGG | 0.370106 | 7.3:-88329379 | MS.gene79624:CDS |
TCCGGTCGTTGTTGTCTTGT+TGG | 0.370598 | 7.3:+88326111 | None:intergenic |
CTTGTGATTGTGGGAATATA+TGG | 0.371220 | 7.3:-88329038 | MS.gene79624:CDS |
CCTAGTAATGCAACTGCTAA+TGG | 0.377088 | 7.3:-88326034 | MS.gene79624:CDS |
AATTAGGTGGATATGATGTT+TGG | 0.379146 | 7.3:-88326946 | MS.gene79624:CDS |
TTACCGTTAATTGCATAGAT+AGG | 0.384374 | 7.3:+88325956 | None:intergenic |
GGCAAAAGAGGTGAATATTC+TGG | 0.389528 | 7.3:-88327199 | MS.gene79624:CDS |
TTGCACAGGGCATATTATAT+CGG | 0.390954 | 7.3:-88327346 | MS.gene79624:intron |
TTAGGTCCAGGAGGACAATT+AGG | 0.391186 | 7.3:+88326896 | None:intergenic |
ATGCCATTAGCTACACTAAC+AGG | 0.393915 | 7.3:+88326010 | None:intergenic |
CAAGTAGTGGCAAGATCTTA+TGG | 0.397359 | 7.3:-88326069 | MS.gene79624:CDS |
CTTGGAAATGGTTATACTCT+GGG | 0.411208 | 7.3:-88325854 | MS.gene79624:CDS |
ATATTCTGGTGGAGCTATAT+GGG | 0.413118 | 7.3:-88327185 | MS.gene79624:CDS |
AAATGGTTATACTCTGGGTT+TGG | 0.413220 | 7.3:-88325849 | MS.gene79624:CDS |
GGTTGCATATATCTTGGAAA+TGG | 0.416429 | 7.3:-88325866 | MS.gene79624:CDS |
GTCACAATGGCGACATCATT+TGG | 0.416873 | 7.3:-88326760 | MS.gene79624:CDS |
CATCATATCCACCTAATTGA+TGG | 0.425001 | 7.3:+88326951 | None:intergenic |
GCTTCTCCAAAATCAGCATC+AGG | 0.427656 | 7.3:+88326872 | None:intergenic |
CCAAAATCAGCATCAGGGTT+AGG | 0.434986 | 7.3:+88326878 | None:intergenic |
TCTGGTTCAACACATTGATC+TGG | 0.439734 | 7.3:+88327031 | None:intergenic |
GACAACAACGACCGGAGGTT+GGG | 0.452196 | 7.3:-88326104 | MS.gene79624:CDS |
ATAGTTTACTTAAACACAAA+AGG | 0.454120 | 7.3:+88325784 | None:intergenic |
GGACCTATCTATGCAATTAA+CGG | 0.455815 | 7.3:-88325959 | MS.gene79624:CDS |
TTAACTGGTCTAGATTCAAC+AGG | 0.456781 | 7.3:-88329125 | MS.gene79624:CDS |
ATTGTCCCATTGAAAATTGC+TGG | 0.460464 | 7.3:+88329230 | None:intergenic |
ATGTTAATTGGACAGTGTCT+AGG | 0.461463 | 7.3:-88329091 | MS.gene79624:CDS |
TCTTGGAAATGGTTATACTC+TGG | 0.463329 | 7.3:-88325855 | MS.gene79624:CDS |
TTTGCAGTGAGAGAAATTGA+TGG | 0.473787 | 7.3:-88329179 | MS.gene79624:CDS |
ATTGTTATCAGGTAACATAT+AGG | 0.480668 | 7.3:+88327222 | None:intergenic |
GTCGTTGTTGTCTTGTTGGA+TGG | 0.481353 | 7.3:+88326115 | None:intergenic |
TCAACACCTAATTGTCCTCC+TGG | 0.489198 | 7.3:-88326902 | MS.gene79624:CDS |
TAAAGGTGCAACATTCTTCA+GGG | 0.493183 | 7.3:+88327296 | None:intergenic |
TCCTCATCAACTGCTATAGT+TGG | 0.493919 | 7.3:+88329062 | None:intergenic |
CCTGATAACAATGGCAAAAG+AGG | 0.493988 | 7.3:-88327211 | MS.gene79624:CDS |
GGTTTGGCAACGGTTATTGG+AGG | 0.496155 | 7.3:-88325833 | MS.gene79624:CDS |
GTGATTTCAGTGGACAGAAA+AGG | 0.497284 | 7.3:-88329390 | MS.gene79624:intron |
GGTCCTGTTAGTGTAGCTAA+TGG | 0.500128 | 7.3:-88326013 | MS.gene79624:CDS |
ACACATTGATCTGGTTGAGT+TGG | 0.501574 | 7.3:+88327040 | None:intergenic |
TTCCATTGCTACCCAACCTC+CGG | 0.505492 | 7.3:+88326093 | None:intergenic |
CATTAGCAGTTGCATTACTA+GGG | 0.507343 | 7.3:+88326035 | None:intergenic |
GAATTGCAGGAGGTGGAACA+TGG | 0.511710 | 7.3:-88326210 | MS.gene79624:CDS |
TGTTAATTGGACAGTGTCTA+GGG | 0.520118 | 7.3:-88329090 | MS.gene79624:CDS |
GACCGGAGGTTGGGTAGCAA+TGG | 0.522325 | 7.3:-88326095 | MS.gene79624:CDS |
TGCATTACTAGGGTTAGCTA+TGG | 0.526749 | 7.3:+88326045 | None:intergenic |
AGACAACAACGACCGGAGGT+TGG | 0.527268 | 7.3:-88326105 | MS.gene79624:CDS |
TAGCAACTTAACTTTGAAGT+GGG | 0.531914 | 7.3:-88329285 | MS.gene79624:CDS |
CCACCTCCTGCAATTCCACC+AGG | 0.536641 | 7.3:+88326217 | None:intergenic |
AAAGAGAAGTACCACCAGTA+AGG | 0.537523 | 7.3:+88325810 | None:intergenic |
TTATACTCTGGGTTTGGCAA+CGG | 0.538064 | 7.3:-88325843 | MS.gene79624:CDS |
TCCAACAAGACAACAACGAC+CGG | 0.539301 | 7.3:-88326112 | MS.gene79624:CDS |
TTAGCACTTGATTTGTACAA+TGG | 0.543019 | 7.3:-88326989 | MS.gene79624:CDS |
TATGCAATTAACGGTAAGAC+TGG | 0.544124 | 7.3:-88325950 | MS.gene79624:CDS |
ATTGCTGTGAATAGATCAAA+TGG | 0.544450 | 7.3:-88329002 | MS.gene79624:CDS |
GCAGGATCCACAAATAAGAA+AGG | 0.545631 | 7.3:-88325980 | MS.gene79624:CDS |
TCAGCATCAGGGTTAGGTCC+AGG | 0.546165 | 7.3:+88326884 | None:intergenic |
TTGAAGTGGGAATTCAATGC+AGG | 0.547207 | 7.3:-88329272 | MS.gene79624:CDS |
CCTGGTGGAATTGCAGGAGG+TGG | 0.549486 | 7.3:-88326217 | MS.gene79624:CDS |
AACCATATATACATTGCCAC+TGG | 0.550879 | 7.3:-88327133 | MS.gene79624:CDS |
GAGACTGGAGCAACTGTGTA+TGG | 0.552916 | 7.3:-88325908 | MS.gene79624:CDS |
TTCACAGCAATAATAACAGC+TGG | 0.553012 | 7.3:+88329014 | None:intergenic |
TGATGAGGATCTTGTGATTG+TGG | 0.553619 | 7.3:-88329048 | MS.gene79624:CDS |
TTAGCAACTTAACTTTGAAG+TGG | 0.555369 | 7.3:-88329286 | MS.gene79624:CDS |
GATGAGGATCTTGTGATTGT+GGG | 0.560321 | 7.3:-88329047 | MS.gene79624:CDS |
TGACATTGACGTATGTGTAA+AGG | 0.562222 | 7.3:+88327094 | None:intergenic |
TGGCGACATCATTTGGTCTA+CGG | 0.562799 | 7.3:-88326753 | MS.gene79624:intron |
GAACAGAGACACAACAAAGA+AGG | 0.566903 | 7.3:+88330111 | None:intergenic |
TGTCTGGGACTAATTACAAA+GGG | 0.567160 | 7.3:-88328926 | MS.gene79624:intron |
GAAGAATGTTGCACCTTTAG+GGG | 0.574154 | 7.3:-88327292 | MS.gene79624:CDS |
AATTGCAGGAGGTGGAACAT+GGG | 0.577922 | 7.3:-88326209 | MS.gene79624:CDS |
TGTTGTATATGTCTCCACCA+TGG | 0.580257 | 7.3:+88329351 | None:intergenic |
GGTGGTATTTCAATTAACAA+TGG | 0.583317 | 7.3:-88325887 | MS.gene79624:CDS |
AATATGAAACCATTCCATGA+AGG | 0.584635 | 7.3:+88329200 | None:intergenic |
CAACAGAAGATATGCTAGCA+AGG | 0.587982 | 7.3:-88329333 | MS.gene79624:CDS |
ATTGCAGGAGGTGGAACATG+GGG | 0.597976 | 7.3:-88326208 | MS.gene79624:CDS |
TTGACAAATCATTACAAGCA+AGG | 0.600049 | 7.3:+88326921 | None:intergenic |
AAATGGTACCATCAATTAGG+TGG | 0.606186 | 7.3:-88326959 | MS.gene79624:CDS |
CTAGTGTTGTCACTATGTCT+GGG | 0.609175 | 7.3:-88328941 | MS.gene79624:CDS |
TATTTGCTCGACTGTTGCCA+TGG | 0.614352 | 7.3:+88330135 | None:intergenic |
TGGGCTTTGCACCGTCACAA+TGG | 0.619336 | 7.3:-88326773 | MS.gene79624:CDS |
ACACATACGTCAATGTCAAG+AGG | 0.619899 | 7.3:-88327089 | MS.gene79624:CDS |
TTTAAGGAAGCTGGACCTGG+TGG | 0.626935 | 7.3:-88326232 | MS.gene79624:intron |
GTTGTTGCTGTACAAAAGAG+TGG | 0.628248 | 7.3:-88326803 | MS.gene79624:CDS |
ACCAACTATAGCAGTTGATG+AGG | 0.629081 | 7.3:-88329063 | MS.gene79624:CDS |
ATGTCTGGGACTAATTACAA+AGG | 0.634176 | 7.3:-88328927 | MS.gene79624:CDS |
GAACAAAATTGGTTAAACCA+TGG | 0.637342 | 7.3:-88329368 | MS.gene79624:CDS |
CAAAATTGGTTAAACCATGG+TGG | 0.639237 | 7.3:-88329365 | MS.gene79624:CDS |
TATTCTGGTGGAGCTATATG+GGG | 0.659541 | 7.3:-88327184 | MS.gene79624:CDS |
CTTCTCCAAAATCAGCATCA+GGG | 0.663016 | 7.3:+88326873 | None:intergenic |
GGACCTGGTGGAATTGCAGG+AGG | 0.666186 | 7.3:-88326220 | MS.gene79624:CDS |
GTAGCAATGGAAGCAAGTAG+TGG | 0.670681 | 7.3:-88326082 | MS.gene79624:CDS |
AAATGATGTCGCCATTGTGA+CGG | 0.678248 | 7.3:+88326762 | None:intergenic |
AACAAGACAACAACGACCGG+AGG | 0.684320 | 7.3:-88326109 | MS.gene79624:CDS |
GTTATTGGAGGCCTTACTGG+TGG | 0.687764 | 7.3:-88325821 | MS.gene79624:CDS |
AGCAGAATACAAATTTCCAG+TGG | 0.699009 | 7.3:+88327117 | None:intergenic |
GCATCAGGGTTAGGTCCAGG+AGG | 0.710561 | 7.3:+88326887 | None:intergenic |
AAAAGAGGTGAATATTCTGG+TGG | 0.712735 | 7.3:-88327196 | MS.gene79624:CDS |
TATATGTTACCTGATAACAA+TGG | 0.716707 | 7.3:-88327220 | MS.gene79624:CDS |
ACTGGAGCAACTGTGTATGG+TGG | 0.753578 | 7.3:-88325905 | MS.gene79624:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAACTATGTAT+AGG | + | chr7.3:88327433-88327452 | None:intergenic | 10.0% |
!! | AATAATGTAAAATTTCTATA+TGG | - | chr7.3:88326453-88326472 | MS.gene79624:intron | 10.0% |
!! | ATAATGTAAAATTTCTATAT+GGG | - | chr7.3:88326454-88326473 | MS.gene79624:intron | 10.0% |
!!! | ATTATATTGATAATATAATG+CGG | + | chr7.3:88327609-88327628 | None:intergenic | 10.0% |
!!! | ATTTTTAGAAACTTAAAATA+AGG | + | chr7.3:88327800-88327819 | None:intergenic | 10.0% |
!!! | TCATTAATATTTTCTATTTT+CGG | + | chr7.3:88326361-88326380 | None:intergenic | 10.0% |
!!! | TTCATTTACATATTTTTTTA+AGG | - | chr7.3:88329678-88329697 | MS.gene79624:intron | 10.0% |
!! | GACTTCAAATAAAAAATAAA+AGG | + | chr7.3:88328039-88328058 | None:intergenic | 15.0% |
!! | TATTAATGTAAAGTCTAATT+TGG | - | chr7.3:88329528-88329547 | MS.gene79624:intron | 15.0% |
!! | TTCACTTAATATTATCATTT+CGG | - | chr7.3:88327041-88327060 | MS.gene79624:CDS | 15.0% |
!!! | AAAGATGTTTTTATTTTTGA+AGG | + | chr7.3:88329488-88329507 | None:intergenic | 15.0% |
!!! | AGTGAAACAATTATTTTTAT+AGG | - | chr7.3:88327136-88327155 | MS.gene79624:CDS | 15.0% |
!!! | TTATGATATTGAACAATTTT+TGG | - | chr7.3:88328342-88328361 | MS.gene79624:intron | 15.0% |
!!! | TTTAGCAATACAATTTTTTA+TGG | + | chr7.3:88329654-88329673 | None:intergenic | 15.0% |
!! | AAACCAAAATAATAGAAGTT+AGG | + | chr7.3:88327318-88327337 | None:intergenic | 20.0% |
!! | AAGAATTTGACAAAATTAAC+TGG | - | chr7.3:88326786-88326805 | MS.gene79624:CDS | 20.0% |
!! | ACTTATGATTTATTTGAACT+CGG | + | chr7.3:88327119-88327138 | None:intergenic | 20.0% |
!! | ATAAAAATATCAATTGCACA+GGG | - | chr7.3:88328567-88328586 | MS.gene79624:intron | 20.0% |
!! | ATGATAATATTAAGTGAAGA+AGG | + | chr7.3:88327039-88327058 | None:intergenic | 20.0% |
!! | ATTAATAGATTTGACCTATT+AGG | + | chr7.3:88329515-88329534 | None:intergenic | 20.0% |
!! | GAAAATGTTAAATATTGCAA+TGG | + | chr7.3:88328017-88328036 | None:intergenic | 20.0% |
!! | GAAATAATTCGTTACTATAA+TGG | + | chr7.3:88329230-88329249 | None:intergenic | 20.0% |
!! | TATAAAAATATCAATTGCAC+AGG | - | chr7.3:88328566-88328585 | MS.gene79624:intron | 20.0% |
!! | TATTAAATTGTGCGTTAATA+CGG | - | chr7.3:88326388-88326407 | MS.gene79624:intron | 20.0% |
!! | TCAAATAGATTAATCCAAAT+AGG | - | chr7.3:88326054-88326073 | MS.gene79624:CDS | 20.0% |
!! | TTGTTTGTTCTCAATATTAA+TGG | - | chr7.3:88328529-88328548 | MS.gene79624:intron | 20.0% |
!! | TTTATTTGATCATGTATGTA+TGG | + | chr7.3:88327515-88327534 | None:intergenic | 20.0% |
!!! | AAAATAAGTCTTGTGTAATT+TGG | + | chr7.3:88327259-88327278 | None:intergenic | 20.0% |
!!! | AAACATCTTTTAAACCTAAT+AGG | - | chr7.3:88329498-88329517 | MS.gene79624:intron | 20.0% |
!!! | AAATAAGTCTTGTGTAATTT+GGG | + | chr7.3:88327258-88327277 | None:intergenic | 20.0% |
!!! | ATGTTTTTATTTTTGAAGGA+AGG | + | chr7.3:88329484-88329503 | None:intergenic | 20.0% |
!!! | ATTGAATTAGAATGATTTTC+TGG | + | chr7.3:88328916-88328935 | None:intergenic | 20.0% |
!!! | ATTTTTTAAACAATATGCAC+CGG | - | chr7.3:88328261-88328280 | MS.gene79624:intron | 20.0% |
!!! | GAAACAATTATTTTTATAGG+AGG | - | chr7.3:88327139-88327158 | MS.gene79624:CDS | 20.0% |
!!! | GATCTCTAAACAAAATTTTT+AGG | - | chr7.3:88327638-88327657 | MS.gene79624:intron | 20.0% |
!!! | TATTTTCATAAACTATCCTT+TGG | - | chr7.3:88326022-88326041 | MS.gene79624:CDS | 20.0% |
!!! | TCAATACTTATTTTAGTTGT+AGG | + | chr7.3:88329565-88329584 | None:intergenic | 20.0% |
!!! | TGATTTGTAAAATTGTTTCT+GGG | + | chr7.3:88328441-88328460 | None:intergenic | 20.0% |
!!! | TGTCATTGTCTTTTTTTATA+AGG | - | chr7.3:88327841-88327860 | MS.gene79624:intron | 20.0% |
!!! | TTAAGTTGCTAATTGTTTTA+AGG | + | chr7.3:88326632-88326651 | None:intergenic | 20.0% |
!!! | TTGATTTGTAAAATTGTTTC+TGG | + | chr7.3:88328442-88328461 | None:intergenic | 20.0% |
!!! | TTTTAATTGACTTTTTTGTG+TGG | + | chr7.3:88327944-88327963 | None:intergenic | 20.0% |
! | AAAGTCTAGATGTAATTAAC+TGG | + | chr7.3:88327387-88327406 | None:intergenic | 25.0% |
! | AATCATCTGAATCATGAATA+AGG | + | chr7.3:88327181-88327200 | None:intergenic | 25.0% |
! | AATTGAAACTCACAAACAAA+AGG | + | chr7.3:88327983-88328002 | None:intergenic | 25.0% |
! | ATTAAATGGTACCATCAATT+AGG | - | chr7.3:88328964-88328983 | MS.gene79624:CDS | 25.0% |
! | ATTATCATTTCGGATTAATG+TGG | - | chr7.3:88327051-88327070 | MS.gene79624:CDS | 25.0% |
! | ATTGAGAACAAACAAGATTT+AGG | + | chr7.3:88328524-88328543 | None:intergenic | 25.0% |
! | ATTGTTATCAGGTAACATAT+AGG | + | chr7.3:88328707-88328726 | None:intergenic | 25.0% |
! | GATCAAATGGTGATTTAATT+TGG | - | chr7.3:88326937-88326956 | MS.gene79624:CDS | 25.0% |
! | GTCGAATTAAACCTTAAAAA+AGG | - | chr7.3:88327489-88327508 | MS.gene79624:intron | 25.0% |
! | TATATGTTACCTGATAACAA+TGG | - | chr7.3:88328706-88328725 | MS.gene79624:intron | 25.0% |
! | TCAAAGCTAGATATTAAATC+TGG | - | chr7.3:88328664-88328683 | MS.gene79624:intron | 25.0% |
! | TCTAGACTTTACAAAACTTA+AGG | - | chr7.3:88327397-88327416 | MS.gene79624:intron | 25.0% |
! | TGATATATATAGAGCCTATT+TGG | + | chr7.3:88326071-88326090 | None:intergenic | 25.0% |
! | TGTACAATGGTGAAATTAAA+TGG | - | chr7.3:88328950-88328969 | MS.gene79624:CDS | 25.0% |
! | TTAGACATGCTTGATATTTA+GGG | + | chr7.3:88326218-88326237 | None:intergenic | 25.0% |
! | TTGAGAACAAACAAGATTTA+GGG | + | chr7.3:88328523-88328542 | None:intergenic | 25.0% |
! | TTTAGACATGCTTGATATTT+AGG | + | chr7.3:88326219-88326238 | None:intergenic | 25.0% |
! | TTTGATCTGCTAAAAAATGA+AGG | + | chr7.3:88328496-88328515 | None:intergenic | 25.0% |
!! | AACTCGGAGTATATTTTATA+CGG | + | chr7.3:88326313-88326332 | None:intergenic | 25.0% |
!! | ATATATTTTCCTTCATGGAA+TGG | - | chr7.3:88326717-88326736 | MS.gene79624:intron | 25.0% |
!! | ATTGATAATATAATGCGGTT+AGG | + | chr7.3:88327604-88327623 | None:intergenic | 25.0% |
!! | ATTTGGGTTCAATATAAGTT+AGG | + | chr7.3:88327242-88327261 | None:intergenic | 25.0% |
!! | CATATAGGTTTTCCATAAAA+TGG | + | chr7.3:88328692-88328711 | None:intergenic | 25.0% |
!! | TTGATAATATAATGCGGTTA+GGG | + | chr7.3:88327603-88327622 | None:intergenic | 25.0% |
!! | TTTGAAGTCAACTAAATTGT+CGG | - | chr7.3:88328050-88328069 | MS.gene79624:intron | 25.0% |
!! | TTTTAATGTTTATCCAAGCA+AGG | + | chr7.3:88325946-88325965 | None:intergenic | 25.0% |
!!! | AAATTTTGTTTAGAGATCAC+TGG | + | chr7.3:88327636-88327655 | None:intergenic | 25.0% |
!!! | AAGACTTATTTTATGCTCAA+TGG | - | chr7.3:88327267-88327286 | MS.gene79624:CDS | 25.0% |
!!! | ACATATTTTTTTAAGGAAGC+TGG | - | chr7.3:88329685-88329704 | MS.gene79624:intron | 25.0% |
!!! | ACTTATTTTAGTTGTAGGAA+TGG | + | chr7.3:88329560-88329579 | None:intergenic | 25.0% |
!!! | ATAGACTTGACTTTTTTTTG+TGG | - | chr7.3:88328106-88328125 | MS.gene79624:intron | 25.0% |
!!! | ATGATTTTTTGTGGTTTAGA+GGG | - | chr7.3:88328371-88328390 | MS.gene79624:intron | 25.0% |
!!! | CTTATTTTAGTTGTAGGAAT+GGG | + | chr7.3:88329559-88329578 | None:intergenic | 25.0% |
!!! | TATGATTTTTTGTGGTTTAG+AGG | - | chr7.3:88328370-88328389 | MS.gene79624:intron | 25.0% |
!!! | TATTTGAGATTTTCTACCAA+AGG | + | chr7.3:88326041-88326060 | None:intergenic | 25.0% |
!!! | TGATTTTGTGATTGTTTTAG+AGG | - | chr7.3:88329313-88329332 | MS.gene79624:CDS | 25.0% |
!!! | TGGTCTTATATGATTTTTTG+TGG | - | chr7.3:88328362-88328381 | MS.gene79624:intron | 25.0% |
!!! | TTTTTTTTGTGGTTGAATGT+TGG | - | chr7.3:88328117-88328136 | MS.gene79624:intron | 25.0% |
AAATTGATGGAACTCTTGTT+TGG | - | chr7.3:88326760-88326779 | MS.gene79624:CDS | 30.0% | |
AACAATGGTTGCATATATCT+TGG | - | chr7.3:88330054-88330073 | MS.gene79624:intron | 30.0% | |
AACATGTTAGTGAGCATAAT+AGG | + | chr7.3:88325840-88325859 | None:intergenic | 30.0% | |
AATATGAAACCATTCCATGA+AGG | + | chr7.3:88326729-88326748 | None:intergenic | 30.0% | |
AATTAGGTGGATATGATGTT+TGG | - | chr7.3:88328980-88328999 | MS.gene79624:CDS | 30.0% | |
ACATGACAACTTTAGTTGTA+TGG | + | chr7.3:88328468-88328487 | None:intergenic | 30.0% | |
ATGCTCACAATTGATGTAAA+TGG | - | chr7.3:88329084-88329103 | MS.gene79624:CDS | 30.0% | |
ATTGCTGTGAATAGATCAAA+TGG | - | chr7.3:88326924-88326943 | MS.gene79624:CDS | 30.0% | |
CAAGATCTAATGAGATAGAT+TGG | - | chr7.3:88327900-88327919 | MS.gene79624:intron | 30.0% | |
CTCGATCATACATGTAATTA+GGG | + | chr7.3:88328160-88328179 | None:intergenic | 30.0% | |
CTTAAAATAAGGCAAGTGAT+TGG | + | chr7.3:88327789-88327808 | None:intergenic | 30.0% | |
GAACAAAATTGGTTAAACCA+TGG | - | chr7.3:88326558-88326577 | MS.gene79624:intron | 30.0% | |
GCAAGTGATTGGATATATTT+GGG | + | chr7.3:88327778-88327797 | None:intergenic | 30.0% | |
GGTGGTATTTCAATTAACAA+TGG | - | chr7.3:88330039-88330058 | MS.gene79624:intron | 30.0% | |
TGATAATATAATGCGGTTAG+GGG | + | chr7.3:88327602-88327621 | None:intergenic | 30.0% | |
TTACCGTTAATTGCATAGAT+AGG | + | chr7.3:88329973-88329992 | None:intergenic | 30.0% | |
TTAGGGGTGAAAATAAGTTA+GGG | + | chr7.3:88327586-88327605 | None:intergenic | 30.0% | |
TTGACAAATCATTACAAGCA+AGG | + | chr7.3:88329008-88329027 | None:intergenic | 30.0% | |
TTTCTTGATGCATCAATTGA+TGG | + | chr7.3:88328775-88328794 | None:intergenic | 30.0% | |
! | GGACAATATATTTTCCTTCA+TGG | - | chr7.3:88326712-88326731 | MS.gene79624:intron | 30.0% |
! | TATTTGGGTCTTGAATGTTT+TGG | + | chr7.3:88327763-88327782 | None:intergenic | 30.0% |
! | TCAATATCCACAAAAGTATG+CGG | - | chr7.3:88327292-88327311 | MS.gene79624:CDS | 30.0% |
! | TCTCATTAGATCTTGATGAT+TGG | + | chr7.3:88327895-88327914 | None:intergenic | 30.0% |
! | TTAGCAACTTAACTTTGAAG+TGG | - | chr7.3:88326640-88326659 | MS.gene79624:intron | 30.0% |
!! | ACTGGATTTTGATAGAAGTT+AGG | + | chr7.3:88327369-88327388 | None:intergenic | 30.0% |
!! | GTTTTGTTGCGAATGTTAAT+TGG | - | chr7.3:88326823-88326842 | MS.gene79624:CDS | 30.0% |
!! | TAGCAACTTAACTTTGAAGT+GGG | - | chr7.3:88326641-88326660 | MS.gene79624:intron | 30.0% |
!! | TATTTTCGGATGATGATGAT+AGG | + | chr7.3:88326347-88326366 | None:intergenic | 30.0% |
!! | TGTAAAATTGTTTCTGGGAT+AGG | + | chr7.3:88328436-88328455 | None:intergenic | 30.0% |
!! | TTAGCACTTGATTTGTACAA+TGG | - | chr7.3:88328937-88328956 | MS.gene79624:CDS | 30.0% |
!! | TTTAATTTGGCAAACTCGTT+TGG | - | chr7.3:88326950-88326969 | MS.gene79624:CDS | 30.0% |
!!! | ATTGTTTTGAGTGATTTCAG+TGG | - | chr7.3:88326526-88326545 | MS.gene79624:intron | 30.0% |
!!! | GACTTTTTTGTGTGGTTATA+CGG | + | chr7.3:88327936-88327955 | None:intergenic | 30.0% |
!!! | TGTATGTATGGCCTTTTTTA+AGG | + | chr7.3:88327503-88327522 | None:intergenic | 30.0% |
!!! | TTAAATCTGGTGCCATTTTA+TGG | - | chr7.3:88328677-88328696 | MS.gene79624:intron | 30.0% |
AAAAGAGGTGAATATTCTGG+TGG | - | chr7.3:88328730-88328749 | MS.gene79624:intron | 35.0% | |
AAATGGTACCATCAATTAGG+TGG | - | chr7.3:88328967-88328986 | MS.gene79624:CDS | 35.0% | |
AAATGGTTATACTCTGGGTT+TGG | - | chr7.3:88330077-88330096 | MS.gene79624:CDS | 35.0% | |
AACCATATATACATTGCCAC+TGG | - | chr7.3:88328793-88328812 | MS.gene79624:intron | 35.0% | |
AATATTCTGGTGGAGCTATA+TGG | - | chr7.3:88328740-88328759 | MS.gene79624:intron | 35.0% | |
AATGAAACTTGCATCAGAAG+TGG | - | chr7.3:88326251-88326270 | MS.gene79624:intron | 35.0% | |
ACATCAATTGTGAGCATCAT+TGG | + | chr7.3:88329081-88329100 | None:intergenic | 35.0% | |
ACTTAATCAACACGTTGTTG+TGG | + | chr7.3:88329362-88329381 | None:intergenic | 35.0% | |
AGCAGAATACAAATTTCCAG+TGG | + | chr7.3:88328812-88328831 | None:intergenic | 35.0% | |
ATATTCTGGTGGAGCTATAT+GGG | - | chr7.3:88328741-88328760 | MS.gene79624:intron | 35.0% | |
ATGTTAATTGGACAGTGTCT+AGG | - | chr7.3:88326835-88326854 | MS.gene79624:CDS | 35.0% | |
ATTACATGTATGATCGAGGA+AGG | - | chr7.3:88328162-88328181 | MS.gene79624:intron | 35.0% | |
ATTGTCCCATTGAAAATTGC+TGG | + | chr7.3:88326699-88326718 | None:intergenic | 35.0% | |
CAAAATTGGTTAAACCATGG+TGG | - | chr7.3:88326561-88326580 | MS.gene79624:intron | 35.0% | |
CAAACTCAAACCAACCTATT+TGG | + | chr7.3:88327717-88327736 | None:intergenic | 35.0% | |
CATCATATCCACCTAATTGA+TGG | + | chr7.3:88328978-88328997 | None:intergenic | 35.0% | |
CATTAGCAGTTGCATTACTA+GGG | + | chr7.3:88329894-88329913 | None:intergenic | 35.0% | |
CCTAATTACATGTATGATCG+AGG | - | chr7.3:88328158-88328177 | MS.gene79624:intron | 35.0% | |
CCTCGATCATACATGTAATT+AGG | + | chr7.3:88328161-88328180 | None:intergenic | 35.0% | |
CTTGGAAATGGTTATACTCT+GGG | - | chr7.3:88330072-88330091 | MS.gene79624:intron | 35.0% | |
CTTGTGATTGTGGGAATATA+TGG | - | chr7.3:88326888-88326907 | MS.gene79624:CDS | 35.0% | |
GGACAGAAAAGGAACAAAAT+TGG | - | chr7.3:88326547-88326566 | MS.gene79624:intron | 35.0% | |
GGACCTATCTATGCAATTAA+CGG | - | chr7.3:88329967-88329986 | MS.gene79624:intron | 35.0% | |
GGCAAGTGATTGGATATATT+TGG | + | chr7.3:88327779-88327798 | None:intergenic | 35.0% | |
GGTTGCATATATCTTGGAAA+TGG | - | chr7.3:88330060-88330079 | MS.gene79624:intron | 35.0% | |
GTTAGGGGTGAAAATAAGTT+AGG | + | chr7.3:88327587-88327606 | None:intergenic | 35.0% | |
TATGCAATTAACGGTAAGAC+TGG | - | chr7.3:88329976-88329995 | MS.gene79624:intron | 35.0% | |
TCTTGGAAATGGTTATACTC+TGG | - | chr7.3:88330071-88330090 | MS.gene79624:intron | 35.0% | |
TGAAGAATGTTGCACCTTTA+GGG | - | chr7.3:88328633-88328652 | MS.gene79624:intron | 35.0% | |
TGACATTGACGTATGTGTAA+AGG | + | chr7.3:88328835-88328854 | None:intergenic | 35.0% | |
TGAGGTCAAAATTTGTGTCA+AGG | - | chr7.3:88326415-88326434 | MS.gene79624:intron | 35.0% | |
TGTTAATTGGACAGTGTCTA+GGG | - | chr7.3:88326836-88326855 | MS.gene79624:CDS | 35.0% | |
TTCACAGCAATAATAACAGC+TGG | + | chr7.3:88326915-88326934 | None:intergenic | 35.0% | |
TTCCAGTGGCAATGTATATA+TGG | + | chr7.3:88328798-88328817 | None:intergenic | 35.0% | |
TTGCACAGGGCATATTATAT+CGG | - | chr7.3:88328580-88328599 | MS.gene79624:intron | 35.0% | |
TTGTTGACATCTTGCACATA+GGG | - | chr7.3:88327691-88327710 | MS.gene79624:intron | 35.0% | |
TTTCAATCTCTACAGCAGTT+CGG | - | chr7.3:88329246-88329265 | MS.gene79624:CDS | 35.0% | |
TTTGCAGTGAGAGAAATTGA+TGG | - | chr7.3:88326747-88326766 | MS.gene79624:intron | 35.0% | |
TTTGTTGACATCTTGCACAT+AGG | - | chr7.3:88327690-88327709 | MS.gene79624:intron | 35.0% | |
! | ATGTCTGGGACTAATTACAA+AGG | - | chr7.3:88326999-88327018 | MS.gene79624:CDS | 35.0% |
! | CAACACCAGCAATTTTCAAT+GGG | - | chr7.3:88326691-88326710 | MS.gene79624:intron | 35.0% |
! | CGGCCTAACTTCTATTATTT+TGG | - | chr7.3:88327312-88327331 | MS.gene79624:CDS | 35.0% |
! | CTTTGAAAAACTTCCCCTAA+AGG | + | chr7.3:88328650-88328669 | None:intergenic | 35.0% |
! | GATAGGTCCTTTCTTATTTG+TGG | + | chr7.3:88329956-88329975 | None:intergenic | 35.0% |
! | GGATGATGATGATAGGAAAA+AGG | + | chr7.3:88326340-88326359 | None:intergenic | 35.0% |
! | GTAAGACTGGTGAAATTTTG+TGG | - | chr7.3:88329989-88330008 | MS.gene79624:intron | 35.0% |
! | TAAAGGTGCAACATTCTTCA+GGG | + | chr7.3:88328633-88328652 | None:intergenic | 35.0% |
! | TGTCGTGACATTTTGCAAAT+TGG | + | chr7.3:88329339-88329358 | None:intergenic | 35.0% |
! | TGTCTGGGACTAATTACAAA+GGG | - | chr7.3:88327000-88327019 | MS.gene79624:CDS | 35.0% |
! | TTAACTGGTCTAGATTCAAC+AGG | - | chr7.3:88326801-88326820 | MS.gene79624:CDS | 35.0% |
!! | ACAAAAGAGTGGTTTTGCTT+GGG | - | chr7.3:88329134-88329153 | MS.gene79624:CDS | 35.0% |
!! | ATAGGAAAAAGGCACTAACT+CGG | + | chr7.3:88326329-88326348 | None:intergenic | 35.0% |
!! | CAGCAGTTCGGTTTTATAAT+TGG | - | chr7.3:88329258-88329277 | MS.gene79624:CDS | 35.0% |
!! | GCATACTTCTGTTGATGATT+TGG | + | chr7.3:88327217-88327236 | None:intergenic | 35.0% |
!! | TACAAAAGAGTGGTTTTGCT+TGG | - | chr7.3:88329133-88329152 | MS.gene79624:CDS | 35.0% |
!! | TTTTAGTTGTAGGAATGGGT+TGG | + | chr7.3:88329555-88329574 | None:intergenic | 35.0% |
!!! | ATTTTGTGGTCTTATGAGAC+TGG | - | chr7.3:88330003-88330022 | MS.gene79624:intron | 35.0% |
AAATGATGTCGCCATTGTGA+CGG | + | chr7.3:88329167-88329186 | None:intergenic | 40.0% | |
ACACATACGTCAATGTCAAG+AGG | - | chr7.3:88328837-88328856 | MS.gene79624:intron | 40.0% | |
ACACATTGATCTGGTTGAGT+TGG | + | chr7.3:88328889-88328908 | None:intergenic | 40.0% | |
AGACAGAACAGAACAACACA+AGG | - | chr7.3:88328297-88328316 | MS.gene79624:intron | 40.0% | |
ATAGGATAAACTCGAGGCAA+GGG | + | chr7.3:88328418-88328437 | None:intergenic | 40.0% | |
ATGCCATTAGCTACACTAAC+AGG | + | chr7.3:88329919-88329938 | None:intergenic | 40.0% | |
CAACAGAAGATATGCTAGCA+AGG | - | chr7.3:88326593-88326612 | MS.gene79624:intron | 40.0% | |
CAAGTAGTGGCAAGATCTTA+TGG | - | chr7.3:88329857-88329876 | MS.gene79624:intron | 40.0% | |
CCATTAGCAGTTGCATTACT+AGG | + | chr7.3:88329895-88329914 | None:intergenic | 40.0% | |
CCTAGTAATGCAACTGCTAA+TGG | - | chr7.3:88329892-88329911 | MS.gene79624:intron | 40.0% | |
CCTGATAACAATGGCAAAAG+AGG | - | chr7.3:88328715-88328734 | MS.gene79624:intron | 40.0% | |
CTAGTGTTGTCACTATGTCT+GGG | - | chr7.3:88326985-88327004 | MS.gene79624:CDS | 40.0% | |
CTGAAGAATGTTGCACCTTT+AGG | - | chr7.3:88328632-88328651 | MS.gene79624:intron | 40.0% | |
CTTCTCCAAAATCAGCATCA+GGG | + | chr7.3:88329056-88329075 | None:intergenic | 40.0% | |
GAACAGAGACACAACAAAGA+AGG | + | chr7.3:88325818-88325837 | None:intergenic | 40.0% | |
GAAGAATGTTGCACCTTTAG+GGG | - | chr7.3:88328634-88328653 | MS.gene79624:intron | 40.0% | |
GACATGCTTGATATTTAGGG+AGG | + | chr7.3:88326215-88326234 | None:intergenic | 40.0% | |
GATGAGGATCTTGTGATTGT+GGG | - | chr7.3:88326879-88326898 | MS.gene79624:CDS | 40.0% | |
GCAGGATCCACAAATAAGAA+AGG | - | chr7.3:88329946-88329965 | MS.gene79624:intron | 40.0% | |
GGCAAAAGAGGTGAATATTC+TGG | - | chr7.3:88328727-88328746 | MS.gene79624:intron | 40.0% | |
GGGACAAAAATTTCTGTGTC+AGG | - | chr7.3:88328391-88328410 | MS.gene79624:intron | 40.0% | |
GTGATTTCAGTGGACAGAAA+AGG | - | chr7.3:88326536-88326555 | MS.gene79624:intron | 40.0% | |
GTTGTTGCTGTACAAAAGAG+TGG | - | chr7.3:88329123-88329142 | MS.gene79624:CDS | 40.0% | |
TATTCTGGTGGAGCTATATG+GGG | - | chr7.3:88328742-88328761 | MS.gene79624:intron | 40.0% | |
TCCTCATCAACTGCTATAGT+TGG | + | chr7.3:88326867-88326886 | None:intergenic | 40.0% | |
TGACAAGCAAACCTATGTGT+AGG | - | chr7.3:88327459-88327478 | MS.gene79624:intron | 40.0% | |
TGATGAGGATCTTGTGATTG+TGG | - | chr7.3:88326878-88326897 | MS.gene79624:CDS | 40.0% | |
TGTTGTATATGTCTCCACCA+TGG | + | chr7.3:88326578-88326597 | None:intergenic | 40.0% | |
TTATACTCTGGGTTTGGCAA+CGG | - | chr7.3:88330083-88330102 | MS.gene79624:CDS | 40.0% | |
TTGAAGTGGGAATTCAATGC+AGG | - | chr7.3:88326654-88326673 | MS.gene79624:intron | 40.0% | |
! | ACCAACTATAGCAGTTGATG+AGG | - | chr7.3:88326863-88326882 | MS.gene79624:CDS | 40.0% |
! | CCTCTTTTGCCATTGTTATC+AGG | + | chr7.3:88328718-88328737 | None:intergenic | 40.0% |
! | CTAAAGGTGCAACATTCTTC+AGG | + | chr7.3:88328634-88328653 | None:intergenic | 40.0% |
! | GCAACACCAGCAATTTTCAA+TGG | - | chr7.3:88326690-88326709 | MS.gene79624:intron | 40.0% |
! | TCTGGTTCAACACATTGATC+TGG | + | chr7.3:88328898-88328917 | None:intergenic | 40.0% |
! | TGAAAGTTTGTAGCCTTGCT+TGG | - | chr7.3:88325930-88325949 | MS.gene79624:CDS | 40.0% |
! | TTTTGTGGTTGAATGTTGGC+TGG | - | chr7.3:88328121-88328140 | MS.gene79624:intron | 40.0% |
!! | AAAGAGAAGTACCACCAGTA+AGG | + | chr7.3:88330119-88330138 | None:intergenic | 40.0% |
!! | TGCATTACTAGGGTTAGCTA+TGG | + | chr7.3:88329884-88329903 | None:intergenic | 40.0% |
!!! | CTGTCTAGTGTTGTTTTGTC+CGG | + | chr7.3:88328283-88328302 | None:intergenic | 40.0% |
!!! | TTTTTTAAGGAAGCTGGACC+TGG | - | chr7.3:88329691-88329710 | MS.gene79624:intron | 40.0% |
AATTGCAGGAGGTGGAACAT+GGG | - | chr7.3:88329717-88329736 | MS.gene79624:intron | 45.0% | |
CCAAAATCAGCATCAGGGTT+AGG | + | chr7.3:88329051-88329070 | None:intergenic | 45.0% | |
CGACTTCTTAGCCTACACAT+AGG | + | chr7.3:88327473-88327492 | None:intergenic | 45.0% | |
GATAGGATAAACTCGAGGCA+AGG | + | chr7.3:88328419-88328438 | None:intergenic | 45.0% | |
GCTAATGGCATTGTCTTTGC+AGG | - | chr7.3:88329928-88329947 | MS.gene79624:intron | 45.0% | |
GCTAGTGTTGTCACTATGTC+TGG | - | chr7.3:88326984-88327003 | MS.gene79624:CDS | 45.0% | |
GCTTCTCCAAAATCAGCATC+AGG | + | chr7.3:88329057-88329076 | None:intergenic | 45.0% | |
GGTCCTGTTAGTGTAGCTAA+TGG | - | chr7.3:88329913-88329932 | MS.gene79624:intron | 45.0% | |
GTAGCAATGGAAGCAAGTAG+TGG | - | chr7.3:88329844-88329863 | MS.gene79624:intron | 45.0% | |
GTCACAATGGCGACATCATT+TGG | - | chr7.3:88329166-88329185 | MS.gene79624:CDS | 45.0% | |
GTGCGTTAATACGGTGTTTG+AGG | - | chr7.3:88326397-88326416 | MS.gene79624:intron | 45.0% | |
TCAACACCTAATTGTCCTCC+TGG | - | chr7.3:88329024-88329043 | MS.gene79624:CDS | 45.0% | |
TCCAACAAGACAACAACGAC+CGG | - | chr7.3:88329814-88329833 | MS.gene79624:intron | 45.0% | |
TCTTGCACATAGGGCCAAAT+AGG | - | chr7.3:88327700-88327719 | MS.gene79624:intron | 45.0% | |
TGGCGACATCATTTGGTCTA+CGG | - | chr7.3:88329173-88329192 | MS.gene79624:CDS | 45.0% | |
TTAGGTCCAGGAGGACAATT+AGG | + | chr7.3:88329033-88329052 | None:intergenic | 45.0% | |
! | AGTTAGGCCGCATACTTTTG+TGG | + | chr7.3:88327302-88327321 | None:intergenic | 45.0% |
! | GTCGTTGTTGTCTTGTTGGA+TGG | + | chr7.3:88329814-88329833 | None:intergenic | 45.0% |
! | TCTGGGATAGGATAAACTCG+AGG | + | chr7.3:88328424-88328443 | None:intergenic | 45.0% |
!!! | CCTAACCCTGATGCTGATTT+TGG | - | chr7.3:88329048-88329067 | MS.gene79624:CDS | 45.0% |
AACAAGACAACAACGACCGG+AGG | - | chr7.3:88329817-88329836 | MS.gene79624:intron | 50.0% | |
ACGGTTATTGGAGGCCTTAC+TGG | - | chr7.3:88330102-88330121 | MS.gene79624:CDS | 50.0% | |
ACTGGAGCAACTGTGTATGG+TGG | - | chr7.3:88330021-88330040 | MS.gene79624:intron | 50.0% | |
ATTGCAGGAGGTGGAACATG+GGG | - | chr7.3:88329718-88329737 | MS.gene79624:intron | 50.0% | |
CTGGGTTTGGCAACGGTTAT+TGG | - | chr7.3:88330090-88330109 | MS.gene79624:CDS | 50.0% | |
GAATTGCAGGAGGTGGAACA+TGG | - | chr7.3:88329716-88329735 | MS.gene79624:intron | 50.0% | |
GAGACTGGAGCAACTGTGTA+TGG | - | chr7.3:88330018-88330037 | MS.gene79624:intron | 50.0% | |
GCACATAGGGCCAAATAGGT+TGG | - | chr7.3:88327704-88327723 | MS.gene79624:intron | 50.0% | |
GGTTTGGCAACGGTTATTGG+AGG | - | chr7.3:88330093-88330112 | MS.gene79624:CDS | 50.0% | |
GTTATTGGAGGCCTTACTGG+TGG | - | chr7.3:88330105-88330124 | MS.gene79624:CDS | 50.0% | |
TCCGGTCGTTGTTGTCTTGT+TGG | + | chr7.3:88329818-88329837 | None:intergenic | 50.0% | |
TTCCATTGCTACCCAACCTC+CGG | + | chr7.3:88329836-88329855 | None:intergenic | 50.0% | |
TTTAAGGAAGCTGGACCTGG+TGG | - | chr7.3:88329694-88329713 | MS.gene79624:intron | 50.0% | |
! | GTGGTTGAATGTTGGCTGGT+TGG | - | chr7.3:88328125-88328144 | MS.gene79624:intron | 50.0% |
AGACAACAACGACCGGAGGT+TGG | - | chr7.3:88329821-88329840 | MS.gene79624:intron | 55.0% | |
GACAACAACGACCGGAGGTT+GGG | - | chr7.3:88329822-88329841 | MS.gene79624:intron | 55.0% | |
TCAGCATCAGGGTTAGGTCC+AGG | + | chr7.3:88329045-88329064 | None:intergenic | 55.0% | |
TGGGCTTTGCACCGTCACAA+TGG | - | chr7.3:88329153-88329172 | MS.gene79624:CDS | 55.0% | |
CCACCTCCTGCAATTCCACC+AGG | + | chr7.3:88329712-88329731 | None:intergenic | 60.0% | |
CCTGGTGGAATTGCAGGAGG+TGG | - | chr7.3:88329709-88329728 | MS.gene79624:intron | 60.0% | |
GACCGGAGGTTGGGTAGCAA+TGG | - | chr7.3:88329831-88329850 | MS.gene79624:intron | 60.0% | |
GCATCAGGGTTAGGTCCAGG+AGG | + | chr7.3:88329042-88329061 | None:intergenic | 60.0% | |
GCTGGACCTGGTGGAATTGC+AGG | - | chr7.3:88329703-88329722 | MS.gene79624:intron | 60.0% | |
GGACCTGGTGGAATTGCAGG+AGG | - | chr7.3:88329706-88329725 | MS.gene79624:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 88325793 | 88330155 | 88325793 | ID=MS.gene79624 |
chr7.3 | mRNA | 88325793 | 88330155 | 88325793 | ID=MS.gene79624.t1;Parent=MS.gene79624 |
chr7.3 | exon | 88330075 | 88330155 | 88330075 | ID=MS.gene79624.t1.exon1;Parent=MS.gene79624.t1 |
chr7.3 | CDS | 88330075 | 88330155 | 88330075 | ID=cds.MS.gene79624.t1;Parent=MS.gene79624.t1 |
chr7.3 | exon | 88328927 | 88329402 | 88328927 | ID=MS.gene79624.t1.exon2;Parent=MS.gene79624.t1 |
chr7.3 | CDS | 88328927 | 88329402 | 88328927 | ID=cds.MS.gene79624.t1;Parent=MS.gene79624.t1 |
chr7.3 | exon | 88326754 | 88327360 | 88326754 | ID=MS.gene79624.t1.exon3;Parent=MS.gene79624.t1 |
chr7.3 | CDS | 88326754 | 88327360 | 88326754 | ID=cds.MS.gene79624.t1;Parent=MS.gene79624.t1 |
chr7.3 | exon | 88325793 | 88326248 | 88325793 | ID=MS.gene79624.t1.exon4;Parent=MS.gene79624.t1 |
chr7.3 | CDS | 88325793 | 88326248 | 88325793 | ID=cds.MS.gene79624.t1;Parent=MS.gene79624.t1 |
Gene Sequence |
Protein sequence |