Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437180 | XP_024627854.1 | 84.661 | 339 | 27 | 2 | 1 | 314 | 934 | 1272 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437180 | sp|Q8L5R3|TBCD_ARATH | 53.191 | 329 | 130 | 2 | 10 | 314 | 926 | 1254 | 3.44e-104 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437180 | A0A072VQN2 | 84.661 | 339 | 27 | 2 | 1 | 314 | 934 | 1272 | 0.0 | 565 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1437180 | 0.844769 | 6.158859e-59 | -8.615850e-47 |
| Msa0006110 | Msa1437180 | 0.806914 | 6.526605e-50 | -8.615850e-47 |
| Msa0009180 | Msa1437180 | 0.809715 | 1.649986e-50 | -8.615850e-47 |
| Msa0017510 | Msa1437180 | 0.803793 | 2.942052e-49 | -8.615850e-47 |
| Msa0032430 | Msa1437180 | 0.819407 | 1.180566e-52 | -8.615850e-47 |
| Msa0036140 | Msa1437180 | 0.806811 | 6.863149e-50 | -8.615850e-47 |
| Msa0043980 | Msa1437180 | 0.804179 | 2.445716e-49 | -8.615850e-47 |
| Msa0044000 | Msa1437180 | 0.805380 | 1.372875e-49 | -8.615850e-47 |
| Msa0044090 | Msa1437180 | 0.850223 | 1.951144e-60 | -8.615850e-47 |
| Msa0045790 | Msa1437180 | 0.818437 | 1.960719e-52 | -8.615850e-47 |
| Msa0046160 | Msa1437180 | 0.812865 | 3.419681e-51 | -8.615850e-47 |
| Msa0047070 | Msa1437180 | 0.814656 | 1.378654e-51 | -8.615850e-47 |
| Msa0054480 | Msa1437180 | 0.840342 | 9.212549e-58 | -8.615850e-47 |
| Msa0075470 | Msa1437180 | 0.802493 | 5.464764e-49 | -8.615850e-47 |
| Msa0080090 | Msa1437180 | 0.804641 | 1.959113e-49 | -8.615850e-47 |
| Msa0081090 | Msa1437180 | 0.812969 | 3.243963e-51 | -8.615850e-47 |
| Msa0084380 | Msa1437180 | 0.827919 | 1.199171e-54 | -8.615850e-47 |
| Msa0089750 | Msa1437180 | 0.814045 | 1.881546e-51 | -8.615850e-47 |
| Msa0090360 | Msa1437180 | 0.812105 | 5.011822e-51 | -8.615850e-47 |
| Msa0095560 | Msa1437180 | 0.803403 | 3.544412e-49 | -8.615850e-47 |
| Msa0101270 | Msa1437180 | 0.805741 | 1.153357e-49 | -8.615850e-47 |
| Msa0101500 | Msa1437180 | -0.808739 | 2.670777e-50 | -8.615850e-47 |
| Msa0114060 | Msa1437180 | 0.812289 | 4.569516e-51 | -8.615850e-47 |
| Msa1348890 | Msa1437180 | 0.829891 | 3.992688e-55 | -8.615850e-47 |
| Msa1353470 | Msa1437180 | 0.807977 | 3.883895e-50 | -8.615850e-47 |
| Msa1353980 | Msa1437180 | 0.842604 | 2.335911e-58 | -8.615850e-47 |
| Msa1359040 | Msa1437180 | 0.804048 | 2.604600e-49 | -8.615850e-47 |
| Msa1360440 | Msa1437180 | 0.830504 | 2.829421e-55 | -8.615850e-47 |
| Msa1370070 | Msa1437180 | -0.800827 | 1.200523e-48 | -8.615850e-47 |
| Msa1373030 | Msa1437180 | 0.836876 | 7.235649e-57 | -8.615850e-47 |
| Msa1374470 | Msa1437180 | 0.806933 | 6.466830e-50 | -8.615850e-47 |
| Msa1392240 | Msa1437180 | 0.807017 | 6.205913e-50 | -8.615850e-47 |
| Msa1392260 | Msa1437180 | 0.802821 | 4.676554e-49 | -8.615850e-47 |
| Msa1392780 | Msa1437180 | 0.800648 | 1.305772e-48 | -8.615850e-47 |
| Msa1393570 | Msa1437180 | 0.811027 | 8.597393e-51 | -8.615850e-47 |
| Msa1394380 | Msa1437180 | 0.814896 | 1.219899e-51 | -8.615850e-47 |
| Msa1397120 | Msa1437180 | 0.808531 | 2.958993e-50 | -8.615850e-47 |
| Msa1402400 | Msa1437180 | 0.812361 | 4.407504e-51 | -8.615850e-47 |
| Msa1409880 | Msa1437180 | 0.807524 | 4.846495e-50 | -8.615850e-47 |
| Msa1411020 | Msa1437180 | 0.803993 | 2.674157e-49 | -8.615850e-47 |
| Msa1412640 | Msa1437180 | 0.820610 | 6.262234e-53 | -8.615850e-47 |
| Msa1424290 | Msa1437180 | 0.808822 | 2.563676e-50 | -8.615850e-47 |
| Msa1425260 | Msa1437180 | 0.817413 | 3.339883e-52 | -8.615850e-47 |
| Msa1429900 | Msa1437180 | 0.803344 | 3.645937e-49 | -8.615850e-47 |
| Msa1433390 | Msa1437180 | 0.808565 | 2.909205e-50 | -8.615850e-47 |
| Msa1434350 | Msa1437180 | 0.805349 | 1.393220e-49 | -8.615850e-47 |
| Msa1436480 | Msa1437180 | 0.802292 | 6.011949e-49 | -8.615850e-47 |
| Msa1437180 | Msa1439320 | 0.803218 | 3.871606e-49 | -8.615850e-47 |
| Msa1437180 | Msa1440560 | 0.819379 | 1.197727e-52 | -8.615850e-47 |
| Msa1437180 | Msa1443850 | 0.818633 | 1.770697e-52 | -8.615850e-47 |
| Msa1437180 | Msa1449340 | -0.806190 | 9.279601e-50 | -8.615850e-47 |
| Msa1437180 | Msa1451160 | 0.821139 | 4.732287e-53 | -8.615850e-47 |
| Msa1437180 | Msa1452240 | 0.808424 | 3.117684e-50 | -8.615850e-47 |
| Msa1437180 | Msa1460050 | 0.813512 | 2.465352e-51 | -8.615850e-47 |
| Msa1437180 | Msa1464810 | 0.808432 | 3.106518e-50 | -8.615850e-47 |
| Msa1437180 | Msa1466540 | 0.849154 | 3.878640e-60 | -8.615850e-47 |
| Msa0607050 | Msa1437180 | 0.822837 | 1.912707e-53 | -8.615850e-47 |
| Msa0607580 | Msa1437180 | 0.800759 | 1.239746e-48 | -8.615850e-47 |
| Msa0610430 | Msa1437180 | 0.807948 | 3.939242e-50 | -8.615850e-47 |
| Msa0615710 | Msa1437180 | 0.822611 | 2.159607e-53 | -8.615850e-47 |
| Msa0616160 | Msa1437180 | 0.806317 | 8.724268e-50 | -8.615850e-47 |
| Msa0617640 | Msa1437180 | 0.813123 | 3.000853e-51 | -8.615850e-47 |
| Msa0624470 | Msa1437180 | 0.802130 | 6.493141e-49 | -8.615850e-47 |
| Msa0625720 | Msa1437180 | 0.849946 | 2.332893e-60 | -8.615850e-47 |
| Msa0627450 | Msa1437180 | 0.818111 | 2.324897e-52 | -8.615850e-47 |
| Msa0631360 | Msa1437180 | 0.805242 | 1.467092e-49 | -8.615850e-47 |
| Msa0639430 | Msa1437180 | 0.811257 | 7.663944e-51 | -8.615850e-47 |
| Msa0657970 | Msa1437180 | 0.818193 | 2.226866e-52 | -8.615850e-47 |
| Msa0661650 | Msa1437180 | 0.830394 | 3.010585e-55 | -8.615850e-47 |
| Msa0663390 | Msa1437180 | 0.857957 | 1.145095e-62 | -8.615850e-47 |
| Msa0667050 | Msa1437180 | 0.802099 | 6.586774e-49 | -8.615850e-47 |
| Msa0673460 | Msa1437180 | 0.801585 | 8.400433e-49 | -8.615850e-47 |
| Msa0681250 | Msa1437180 | 0.831714 | 1.426968e-55 | -8.615850e-47 |
| Msa0681270 | Msa1437180 | 0.843795 | 1.124883e-58 | -8.615850e-47 |
| Msa0683510 | Msa1437180 | 0.802180 | 6.339933e-49 | -8.615850e-47 |
| Msa0691380 | Msa1437180 | 0.806237 | 9.066681e-50 | -8.615850e-47 |
| Msa0692040 | Msa1437180 | -0.824504 | 7.787798e-54 | -8.615850e-47 |
| Msa0692950 | Msa1437180 | 0.819527 | 1.108523e-52 | -8.615850e-47 |
| Msa0707250 | Msa1437180 | 0.830741 | 2.475707e-55 | -8.615850e-47 |
| Msa0709400 | Msa1437180 | 0.819086 | 1.396737e-52 | -8.615850e-47 |
| Msa0711780 | Msa1437180 | 0.810551 | 1.089893e-50 | -8.615850e-47 |
| Msa0715700 | Msa1437180 | 0.809733 | 1.635207e-50 | -8.615850e-47 |
| Msa0717890 | Msa1437180 | 0.809208 | 2.120021e-50 | -8.615850e-47 |
| Msa0724210 | Msa1437180 | 0.822301 | 2.549067e-53 | -8.615850e-47 |
| Msa0727550 | Msa1437180 | 0.802360 | 5.821140e-49 | -8.615850e-47 |
| Msa0731940 | Msa1437180 | 0.820042 | 8.454973e-53 | -8.615850e-47 |
| Msa0736960 | Msa1437180 | 0.800293 | 1.542696e-48 | -8.615850e-47 |
| Msa0740510 | Msa1437180 | 0.800809 | 1.210516e-48 | -8.615850e-47 |
| Msa0740520 | Msa1437180 | 0.801346 | 9.401758e-49 | -8.615850e-47 |
| Msa0741840 | Msa1437180 | 0.803527 | 3.341662e-49 | -8.615850e-47 |
| Msa0760180 | Msa1437180 | 0.809923 | 1.488754e-50 | -8.615850e-47 |
| Msa0760250 | Msa1437180 | 0.812789 | 3.552633e-51 | -8.615850e-47 |
| Msa0762970 | Msa1437180 | 0.814829 | 1.262259e-51 | -8.615850e-47 |
| Msa0764570 | Msa1437180 | 0.806653 | 7.409432e-50 | -8.615850e-47 |
| Msa0765910 | Msa1437180 | 0.818512 | 1.885870e-52 | -8.615850e-47 |
| Msa0767300 | Msa1437180 | 0.809295 | 2.030982e-50 | -8.615850e-47 |
| Msa0796700 | Msa1437180 | 0.810517 | 1.108364e-50 | -8.615850e-47 |
| Msa0806790 | Msa1437180 | 0.831920 | 1.269835e-55 | -8.615850e-47 |
| Msa0806800 | Msa1437180 | 0.804876 | 1.750376e-49 | -8.615850e-47 |
| Msa0810220 | Msa1437180 | 0.823687 | 1.211284e-53 | -8.615850e-47 |
| Msa0818060 | Msa1437180 | 0.820172 | 7.893872e-53 | -8.615850e-47 |
| Msa0820770 | Msa1437180 | 0.810082 | 1.375546e-50 | -8.615850e-47 |
| Msa0827350 | Msa1437180 | -0.801175 | 1.019338e-48 | -8.615850e-47 |
| Msa0828560 | Msa1437180 | 0.811562 | 6.579230e-51 | -8.615850e-47 |
| Msa0831110 | Msa1437180 | 0.826777 | 2.252496e-54 | -8.615850e-47 |
| Msa0832340 | Msa1437180 | 0.853724 | 1.977492e-61 | -8.615850e-47 |
| Msa0124060 | Msa1437180 | 0.844680 | 6.507241e-59 | -8.615850e-47 |
| Msa0127050 | Msa1437180 | 0.810317 | 1.224264e-50 | -8.615850e-47 |
| Msa0127800 | Msa1437180 | 0.803371 | 3.599790e-49 | -8.615850e-47 |
| Msa0157290 | Msa1437180 | 0.803923 | 2.765186e-49 | -8.615850e-47 |
| Msa0159930 | Msa1437180 | 0.806421 | 8.294103e-50 | -8.615850e-47 |
| Msa0168500 | Msa1437180 | 0.822124 | 2.801375e-53 | -8.615850e-47 |
| Msa0169280 | Msa1437180 | 0.801154 | 1.029182e-48 | -8.615850e-47 |
| Msa0169310 | Msa1437180 | 0.805937 | 1.048892e-49 | -8.615850e-47 |
| Msa0172070 | Msa1437180 | 0.818946 | 1.502747e-52 | -8.615850e-47 |
| Msa0183760 | Msa1437180 | 0.814608 | 1.412801e-51 | -8.615850e-47 |
| Msa0184040 | Msa1437180 | 0.806782 | 6.960587e-50 | -8.615850e-47 |
| Msa0188830 | Msa1437180 | 0.807280 | 5.458698e-50 | -8.615850e-47 |
| Msa0206010 | Msa1437180 | 0.802849 | 4.615329e-49 | -8.615850e-47 |
| Msa0211150 | Msa1437180 | 0.836459 | 9.245198e-57 | -8.615850e-47 |
| Msa0212990 | Msa1437180 | 0.801395 | 9.187428e-49 | -8.615850e-47 |
| Msa0218240 | Msa1437180 | 0.813593 | 2.366694e-51 | -8.615850e-47 |
| Msa0218270 | Msa1437180 | 0.812376 | 4.372886e-51 | -8.615850e-47 |
| Msa0225100 | Msa1437180 | 0.816916 | 4.320229e-52 | -8.615850e-47 |
| Msa0231370 | Msa1437180 | 0.817745 | 2.812406e-52 | -8.615850e-47 |
| Msa1225130 | Msa1437180 | 0.804412 | 2.187113e-49 | -8.615850e-47 |
| Msa1225700 | Msa1437180 | 0.800898 | 1.161356e-48 | -8.615850e-47 |
| Msa1228200 | Msa1437180 | 0.822056 | 2.904512e-53 | -8.615850e-47 |
| Msa1279400 | Msa1437180 | 0.804214 | 2.405432e-49 | -8.615850e-47 |
| Msa1284550 | Msa1437180 | 0.805414 | 1.350162e-49 | -8.615850e-47 |
| Msa1284680 | Msa1437180 | 0.801057 | 1.077373e-48 | -8.615850e-47 |
| Msa1287460 | Msa1437180 | 0.816308 | 5.912446e-52 | -8.615850e-47 |
| Msa1294820 | Msa1437180 | 0.808655 | 2.784351e-50 | -8.615850e-47 |
| Msa1297230 | Msa1437180 | 0.838076 | 3.564988e-57 | -8.615850e-47 |
| Msa1299400 | Msa1437180 | -0.801492 | 8.776498e-49 | -8.615850e-47 |
| Msa1300340 | Msa1437180 | 0.802390 | 5.740147e-49 | -8.615850e-47 |
| Msa1306840 | Msa1437180 | 0.805023 | 1.630876e-49 | -8.615850e-47 |
| Msa1309030 | Msa1437180 | 0.823163 | 1.606263e-53 | -8.615850e-47 |
| Msa1314650 | Msa1437180 | 0.831298 | 1.806656e-55 | -8.615850e-47 |
| Msa1324080 | Msa1437180 | 0.826124 | 3.221658e-54 | -8.615850e-47 |
| Msa1325860 | Msa1437180 | -0.811502 | 6.781579e-51 | -8.615850e-47 |
| Msa1327680 | Msa1437180 | 0.845740 | 3.364335e-59 | -8.615850e-47 |
| Msa1328710 | Msa1437180 | 0.814696 | 1.350691e-51 | -8.615850e-47 |
| Msa1331000 | Msa1437180 | 0.835750 | 1.398706e-56 | -8.615850e-47 |
| Msa1331050 | Msa1437180 | -0.811570 | 6.554634e-51 | -8.615850e-47 |
| Msa1333480 | Msa1437180 | 0.834540 | 2.825019e-56 | -8.615850e-47 |
| Msa1343430 | Msa1437180 | 0.825627 | 4.228259e-54 | -8.615850e-47 |
| Msa0367870 | Msa1437180 | 0.818710 | 1.700297e-52 | -8.615850e-47 |
| Msa0376350 | Msa1437180 | 0.818265 | 2.145365e-52 | -8.615850e-47 |
| Msa0381610 | Msa1437180 | -0.810834 | 9.464537e-51 | -8.615850e-47 |
| Msa0386090 | Msa1437180 | 0.818497 | 1.901070e-52 | -8.615850e-47 |
| Msa0388340 | Msa1437180 | 0.812513 | 4.082162e-51 | -8.615850e-47 |
| Msa0393080 | Msa1437180 | 0.810477 | 1.130561e-50 | -8.615850e-47 |
| Msa0403970 | Msa1437180 | 0.808630 | 2.818290e-50 | -8.615850e-47 |
| Msa0411390 | Msa1437180 | 0.828117 | 1.074355e-54 | -8.615850e-47 |
| Msa0419410 | Msa1437180 | 0.821178 | 4.635125e-53 | -8.615850e-47 |
| Msa0424790 | Msa1437180 | 0.815858 | 7.454365e-52 | -8.615850e-47 |
| Msa0428080 | Msa1437180 | 0.809499 | 1.836195e-50 | -8.615850e-47 |
| Msa0440400 | Msa1437180 | 0.809555 | 1.785444e-50 | -8.615850e-47 |
| Msa0440750 | Msa1437180 | 0.814446 | 1.534670e-51 | -8.615850e-47 |
| Msa0455760 | Msa1437180 | 0.843048 | 1.780562e-58 | -8.615850e-47 |
| Msa0464680 | Msa1437180 | 0.832129 | 1.127399e-55 | -8.615850e-47 |
| Msa0467490 | Msa1437180 | 0.837403 | 5.307426e-57 | -8.615850e-47 |
| Msa0479170 | Msa1437180 | 0.819559 | 1.090146e-52 | -8.615850e-47 |
| Msa0481530 | Msa1437180 | 0.851766 | 7.166031e-61 | -8.615850e-47 |
| Msa1019000 | Msa1437180 | 0.824272 | 8.829335e-54 | -8.615850e-47 |
| Msa1019470 | Msa1437180 | 0.813909 | 2.016405e-51 | -8.615850e-47 |
| Msa1026740 | Msa1437180 | 0.804183 | 2.441579e-49 | -8.615850e-47 |
| Msa1029250 | Msa1437180 | 0.819906 | 9.081335e-53 | -8.615850e-47 |
| Msa1029310 | Msa1437180 | 0.800679 | 1.286946e-48 | -8.615850e-47 |
| Msa1041670 | Msa1437180 | 0.816394 | 5.656138e-52 | -8.615850e-47 |
| Msa1046460 | Msa1437180 | 0.812961 | 3.256827e-51 | -8.615850e-47 |
| Msa1075540 | Msa1437180 | 0.816350 | 5.785147e-52 | -8.615850e-47 |
| Msa1075650 | Msa1437180 | 0.828105 | 1.081288e-54 | -8.615850e-47 |
| Msa1081330 | Msa1437180 | 0.811664 | 6.251833e-51 | -8.615850e-47 |
| Msa1081980 | Msa1437180 | 0.800651 | 1.304240e-48 | -8.615850e-47 |
| Msa1082500 | Msa1437180 | 0.812953 | 3.270544e-51 | -8.615850e-47 |
| Msa1085200 | Msa1437180 | 0.805634 | 1.214272e-49 | -8.615850e-47 |
| Msa1100050 | Msa1437180 | 0.806096 | 9.708508e-50 | -8.615850e-47 |
| Msa1101090 | Msa1437180 | 0.823283 | 1.505226e-53 | -8.615850e-47 |
| Msa1104090 | Msa1437180 | 0.808401 | 3.154331e-50 | -8.615850e-47 |
| Msa1104560 | Msa1437180 | 0.818163 | 2.262511e-52 | -8.615850e-47 |
| Msa0240900 | Msa1437180 | 0.800908 | 1.155865e-48 | -8.615850e-47 |
| Msa0244640 | Msa1437180 | 0.805894 | 1.070650e-49 | -8.615850e-47 |
| Msa0259430 | Msa1437180 | 0.817681 | 2.906504e-52 | -8.615850e-47 |
| Msa0260680 | Msa1437180 | 0.838642 | 2.547823e-57 | -8.615850e-47 |
| Msa0260780 | Msa1437180 | 0.839880 | 1.216212e-57 | -8.615850e-47 |
| Msa0264150 | Msa1437180 | 0.801417 | 9.094080e-49 | -8.615850e-47 |
| Msa0266180 | Msa1437180 | 0.816267 | 6.039932e-52 | -8.615850e-47 |
| Msa0267370 | Msa1437180 | 0.807248 | 5.546628e-50 | -8.615850e-47 |
| Msa0270320 | Msa1437180 | 0.803739 | 3.018565e-49 | -8.615850e-47 |
| Msa0280090 | Msa1437180 | 0.820697 | 5.982660e-53 | -8.615850e-47 |
| Msa0287410 | Msa1437180 | 0.801665 | 8.088805e-49 | -8.615850e-47 |
| Msa0287740 | Msa1437180 | 0.818228 | 2.186606e-52 | -8.615850e-47 |
| Msa0305610 | Msa1437180 | 0.823524 | 1.322410e-53 | -8.615850e-47 |
| Msa0309770 | Msa1437180 | 0.817408 | 3.348809e-52 | -8.615850e-47 |
| Msa0318980 | Msa1437180 | 0.807538 | 4.814342e-50 | -8.615850e-47 |
| Msa0331000 | Msa1437180 | 0.815125 | 1.085242e-51 | -8.615850e-47 |
| Msa0339620 | Msa1437180 | 0.811489 | 6.824205e-51 | -8.615850e-47 |
| Msa0341540 | Msa1437180 | 0.804596 | 2.002038e-49 | -8.615850e-47 |
| Msa0342310 | Msa1437180 | 0.808427 | 3.113580e-50 | -8.615850e-47 |
| Msa0345970 | Msa1437180 | 0.807076 | 6.029879e-50 | -8.615850e-47 |
| Msa0357340 | Msa1437180 | 0.812691 | 3.731537e-51 | -8.615850e-47 |
| Msa0363200 | Msa1437180 | 0.804438 | 2.160640e-49 | -8.615850e-47 |
| Msa0363790 | Msa1437180 | 0.839128 | 1.907307e-57 | -8.615850e-47 |
| Msa1111130 | Msa1437180 | 0.818559 | 1.840112e-52 | -8.615850e-47 |
| Msa1113170 | Msa1437180 | 0.800261 | 1.565751e-48 | -8.615850e-47 |
| Msa1123380 | Msa1437180 | 0.809371 | 1.956199e-50 | -8.615850e-47 |
| Msa1124960 | Msa1437180 | 0.808740 | 2.669122e-50 | -8.615850e-47 |
| Msa1131220 | Msa1437180 | 0.818439 | 1.959422e-52 | -8.615850e-47 |
| Msa1135470 | Msa1437180 | 0.818466 | 1.931299e-52 | -8.615850e-47 |
| Msa1137570 | Msa1437180 | 0.805447 | 1.329139e-49 | -8.615850e-47 |
| Msa1147740 | Msa1437180 | 0.802698 | 4.959179e-49 | -8.615850e-47 |
| Msa1154710 | Msa1437180 | 0.802236 | 6.173151e-49 | -8.615850e-47 |
| Msa1155170 | Msa1437180 | -0.808169 | 3.535092e-50 | -8.615850e-47 |
| Msa1162270 | Msa1437180 | 0.804692 | 1.912043e-49 | -8.615850e-47 |
| Msa1162780 | Msa1437180 | 0.816627 | 5.015711e-52 | -8.615850e-47 |
| Msa1165920 | Msa1437180 | 0.824245 | 8.962734e-54 | -8.615850e-47 |
| Msa1166560 | Msa1437180 | 0.813697 | 2.244583e-51 | -8.615850e-47 |
| Msa1167340 | Msa1437180 | 0.835351 | 1.764981e-56 | -8.615850e-47 |
| Msa1181910 | Msa1437180 | 0.811003 | 8.700654e-51 | -8.615850e-47 |
| Msa1189070 | Msa1437180 | 0.817198 | 3.735201e-52 | -8.615850e-47 |
| Msa1193170 | Msa1437180 | 0.802508 | 5.427325e-49 | -8.615850e-47 |
| Msa1193290 | Msa1437180 | 0.804172 | 2.454257e-49 | -8.615850e-47 |
| Msa1199570 | Msa1437180 | 0.807126 | 5.887198e-50 | -8.615850e-47 |
| Msa1204530 | Msa1437180 | 0.813652 | 2.296771e-51 | -8.615850e-47 |
| Msa1205280 | Msa1437180 | 0.837305 | 5.622419e-57 | -8.615850e-47 |
| Msa1208880 | Msa1437180 | 0.802429 | 5.632929e-49 | -8.615850e-47 |
| Msa1209460 | Msa1437180 | 0.807500 | 4.904261e-50 | -8.615850e-47 |
| Msa1211230 | Msa1437180 | -0.822297 | 2.554172e-53 | -8.615850e-47 |
| Msa1211420 | Msa1437180 | -0.807752 | 4.336237e-50 | -8.615850e-47 |
| Msa0484720 | Msa1437180 | 0.800464 | 1.423515e-48 | -8.615850e-47 |
| Msa0488560 | Msa1437180 | 0.812432 | 4.252435e-51 | -8.615850e-47 |
| Msa0498060 | Msa1437180 | 0.800715 | 1.265750e-48 | -8.615850e-47 |
| Msa0507680 | Msa1437180 | 0.808379 | 3.188305e-50 | -8.615850e-47 |
| Msa0516170 | Msa1437180 | 0.814865 | 1.239228e-51 | -8.615850e-47 |
| Msa0529890 | Msa1437180 | 0.850566 | 1.563592e-60 | -8.615850e-47 |
| Msa0531180 | Msa1437180 | 0.839658 | 1.389066e-57 | -8.615850e-47 |
| Msa0557070 | Msa1437180 | 0.803479 | 3.418854e-49 | -8.615850e-47 |
| Msa0572840 | Msa1437180 | 0.822981 | 1.770907e-53 | -8.615850e-47 |
| Msa0577500 | Msa1437180 | 0.805098 | 1.572472e-49 | -8.615850e-47 |
| Msa0585560 | Msa1437180 | 0.858450 | 8.171202e-63 | -8.615850e-47 |
| Msa0602390 | Msa1437180 | 0.808897 | 2.471533e-50 | -8.615850e-47 |
| Msa0602460 | Msa1437180 | 0.820170 | 7.899722e-53 | -8.615850e-47 |
| Msa0861090 | Msa1437180 | 0.804543 | 2.053785e-49 | -8.615850e-47 |
| Msa0861850 | Msa1437180 | 0.806727 | 7.148465e-50 | -8.615850e-47 |
| Msa0866520 | Msa1437180 | 0.806938 | 6.450380e-50 | -8.615850e-47 |
| Msa0897330 | Msa1437180 | 0.804214 | 2.405706e-49 | -8.615850e-47 |
| Msa0898750 | Msa1437180 | 0.850161 | 2.030499e-60 | -8.615850e-47 |
| Msa0909740 | Msa1437180 | 0.814414 | 1.559547e-51 | -8.615850e-47 |
| Msa0924470 | Msa1437180 | 0.804362 | 2.240361e-49 | -8.615850e-47 |
| Msa0925290 | Msa1437180 | 0.801351 | 9.380443e-49 | -8.615850e-47 |
| Msa0928130 | Msa1437180 | 0.837041 | 6.568784e-57 | -8.615850e-47 |
| Msa0945110 | Msa1437180 | 0.813770 | 2.162955e-51 | -8.615850e-47 |
| Msa0945970 | Msa1437180 | 0.822861 | 1.888504e-53 | -8.615850e-47 |
| Msa0947660 | Msa1437180 | 0.801351 | 9.379639e-49 | -8.615850e-47 |
| Msa0963270 | Msa1437180 | 0.815820 | 7.600058e-52 | -8.615850e-47 |
| Msa0964310 | Msa1437180 | 0.828104 | 1.082209e-54 | -8.615850e-47 |
| Msa0967870 | Msa1437180 | 0.810270 | 1.253262e-50 | -8.615850e-47 |
| Msa0969520 | Msa1437180 | 0.819945 | 8.895926e-53 | -8.615850e-47 |
| Msa0969810 | Msa1437180 | 0.815736 | 7.935928e-52 | -8.615850e-47 |
| Msa0972100 | Msa1437180 | 0.807758 | 4.323455e-50 | -8.615850e-47 |
| Msa0974070 | Msa1437180 | 0.812516 | 4.077216e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437180 | MtrunA17_Chr1g0210711 | 84.661 | 339 | 27 | 2 | 1 | 314 | 934 | 1272 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437180 | AT3G60740.2 | 53.191 | 329 | 130 | 2 | 10 | 314 | 854 | 1182 | 1.27e-105 | 333 |
| Msa1437180 | AT3G60740.1 | 53.191 | 329 | 130 | 2 | 10 | 314 | 926 | 1254 | 3.50e-105 | 333 |
| Msa1437180 | AT3G60740.3 | 53.165 | 158 | 65 | 1 | 10 | 158 | 926 | 1083 | 2.64e-50 | 179 |
Find 71 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTGTTAGAGTATTTAAA+AGG | 0.189542 | tig0028188:+493 | Msa1437180:CDS |
| TCCCTGAGCATTCTTGTATT+AGG | 0.212768 | tig0028188:-532 | Msa1437180:intergenic |
| TTCTCTGGCAATAGAATTAA+AGG | 0.230523 | tig0028188:+2826 | Msa1437180:CDS |
| TTCTCTCGGAAAGGTATATA+TGG | 0.266887 | tig0028188:-219 | Msa1437180:intergenic |
| ACAAATCCCTCCAACTAAAT+TGG | 0.273573 | tig0028188:-109 | Msa1437180:intergenic |
| CCCTGAGCATTCTTGTATTA+GGG | 0.278860 | tig0028188:-531 | Msa1437180:intergenic |
| ATCATACAGCTGCTTCAATT+TGG | 0.279682 | tig0028188:+388 | Msa1437180:CDS |
| CGCTAAGAAGCCTAAAGATT+TGG | 0.281822 | tig0028188:+3365 | Msa1437180:CDS |
| CGAAGGAAGCAGATGCAAAA+TGG | 0.289712 | tig0028188:+259 | Msa1437180:CDS |
| AGTCATCGTACCCACTTTAA+AGG | 0.290504 | tig0028188:+612 | Msa1437180:CDS |
| TACCTTGTCCTCCTGCAAAA+TGG | 0.318484 | tig0028188:+3171 | Msa1437180:CDS |
| TCCTCATTAGTCGAGTCATC+TGG | 0.329434 | tig0028188:+3405 | Msa1437180:CDS |
| AATCTTGCTACCAATTTAGT+TGG | 0.341065 | tig0028188:+99 | Msa1437180:CDS |
| AGTCATATCTATTGGTGATT+TGG | 0.342770 | tig0028188:+441 | Msa1437180:CDS |
| ATTGTTTGAATTGCTTGGTT+TGG | 0.351515 | tig0028188:+3293 | Msa1437180:CDS |
| TATCGCATTTCCTGTATTGT+TGG | 0.373210 | tig0028188:-588 | Msa1437180:intergenic |
| TGAATTGCTTGGTTTGGAGG+TGG | 0.384529 | tig0028188:+3299 | Msa1437180:CDS |
| GAATTGCTTGGTTTGGAGGT+GGG | 0.407112 | tig0028188:+3300 | Msa1437180:CDS |
| TCAGGTTTAGTCATATCTAT+TGG | 0.407873 | tig0028188:+433 | Msa1437180:intron |
| CATGCTGGTATTGCAATACT+TGG | 0.409961 | tig0028188:+2872 | Msa1437180:CDS |
| TTCACCCACACGCTAAATCT+AGG | 0.413419 | tig0028188:-3451 | Msa1437180:intergenic |
| AATTGCTTGGTTTGGAGGTG+GGG | 0.428201 | tig0028188:+3301 | Msa1437180:CDS |
| AAATTATTTCTATGACTCGC+TGG | 0.429915 | tig0028188:+3232 | Msa1437180:CDS |
| CACTGTTAGAGTATTTAAAA+GGG | 0.437380 | tig0028188:+494 | Msa1437180:CDS |
| GTTTGAATTGCTTGGTTTGG+AGG | 0.441179 | tig0028188:+3296 | Msa1437180:CDS |
| GCTCTCGTATGGATTGGTTC+TGG | 0.449432 | tig0028188:-2911 | Msa1437180:intergenic |
| GAAGGAAGCAGATGCAAAAT+GGG | 0.470077 | tig0028188:+260 | Msa1437180:CDS |
| TGTGGGTTCTCCAACAATAC+AGG | 0.472563 | tig0028188:+578 | Msa1437180:CDS |
| ATCTTTAGGCTTCTTAGCGT+TGG | 0.477774 | tig0028188:-3361 | Msa1437180:intergenic |
| TGACTTCTTCTAACTTCTCT+CGG | 0.477797 | tig0028188:-233 | Msa1437180:intergenic |
| GTTGAATTGTTTGAATTGCT+TGG | 0.481774 | tig0028188:+3288 | Msa1437180:CDS |
| GAAAGGCAATACCTTTAAAG+TGG | 0.482802 | tig0028188:-623 | Msa1437180:intergenic |
| ACCCTAATACAAGAATGCTC+AGG | 0.483477 | tig0028188:+530 | Msa1437180:CDS |
| CTTGCTACCAATTTAGTTGG+AGG | 0.484453 | tig0028188:+102 | Msa1437180:CDS |
| TAAGCAAGCTGTGGAGAAGA+TGG | 0.497161 | tig0028188:+131 | Msa1437180:CDS |
| GACTCGCTGGGATGATAGCA+TGG | 0.502260 | tig0028188:+3245 | Msa1437180:CDS |
| TGCTGTCAGTTGACATCCTG+TGG | 0.510604 | tig0028188:+560 | Msa1437180:CDS |
| CCTCATTAGTCGAGTCATCT+GGG | 0.511144 | tig0028188:+3406 | Msa1437180:CDS |
| TGCAATACCAGCATGCAACT+TGG | 0.511728 | tig0028188:-2864 | Msa1437180:intergenic |
| TCTTGTTCATCCGTACCCTA+AGG | 0.516816 | tig0028188:+2955 | Msa1437180:CDS |
| TTTGGTAGATTCTTTGAAGA+GGG | 0.521338 | tig0028188:+459 | Msa1437180:CDS |
| TCATCTCTCAAGAACGGTGA+TGG | 0.523034 | tig0028188:+3324 | Msa1437180:CDS |
| TTGCTACCAATTTAGTTGGA+GGG | 0.523195 | tig0028188:+103 | Msa1437180:CDS |
| AATTATTTCTATGACTCGCT+GGG | 0.535594 | tig0028188:+3233 | Msa1437180:CDS |
| GACTTCTCCAAGTTGCATGC+TGG | 0.536808 | tig0028188:+2857 | Msa1437180:CDS |
| GAGAAGGCTCTCGTATGGAT+TGG | 0.539384 | tig0028188:-2917 | Msa1437180:intergenic |
| GTTGAGAGAAGGCTCTCGTA+TGG | 0.544853 | tig0028188:-2922 | Msa1437180:intergenic |
| CCTGCAAAATGGAAATCTTG+TGG | 0.554314 | tig0028188:+3182 | Msa1437180:CDS |
| TTTGAAGAGGGTATCACTCT+CGG | 0.559290 | tig0028188:+471 | Msa1437180:CDS |
| TTAAGAATCACCTTAGGGTA+CGG | 0.559584 | tig0028188:-2965 | Msa1437180:intergenic |
| TCTTCTAACTTCTCTCGGAA+AGG | 0.563379 | tig0028188:-228 | Msa1437180:intergenic |
| TCTCTGGCAATAGAATTAAA+GGG | 0.569416 | tig0028188:+2827 | Msa1437180:CDS |
| CCCAGATGACTCGACTAATG+AGG | 0.573370 | tig0028188:-3406 | Msa1437180:intergenic |
| AAAAGTAAGAAGTTGAGAGA+AGG | 0.580104 | tig0028188:-2933 | Msa1437180:intergenic |
| TGTATTGTTGGAGAACCCAC+AGG | 0.590881 | tig0028188:-576 | Msa1437180:intergenic |
| CCCTAATACAAGAATGCTCA+GGG | 0.591300 | tig0028188:+531 | Msa1437180:CDS |
| GTTAGAAGAAGTCATTCCGA+AGG | 0.596658 | tig0028188:+242 | Msa1437180:CDS |
| ATTTGGTAGATTCTTTGAAG+AGG | 0.603035 | tig0028188:+458 | Msa1437180:CDS |
| ACTGTTAGAGTATTTAAAAG+GGG | 0.603137 | tig0028188:+495 | Msa1437180:CDS |
| GAAGCAGCTGTATGATGTGT+GGG | 0.612758 | tig0028188:-381 | Msa1437180:intergenic |
| AAAGGCAATACCTTTAAAGT+GGG | 0.617607 | tig0028188:-622 | Msa1437180:intergenic |
| AGGGATTTGTAAGCAAGCTG+TGG | 0.625701 | tig0028188:+122 | Msa1437180:CDS |
| GTGGGGTCATCTCTCAAGAA+CGG | 0.639023 | tig0028188:+3318 | Msa1437180:CDS |
| AGAACGGTGATGGAGTAGCA+AGG | 0.650573 | tig0028188:+3334 | Msa1437180:CDS |
| GCAAACCTAGATTTAGCGTG+TGG | 0.652384 | tig0028188:+3446 | Msa1437180:three_prime_UTR |
| GCTGTCAGTTGACATCCTGT+GGG | 0.655342 | tig0028188:+561 | Msa1437180:CDS |
| TGAAGCAGCTGTATGATGTG+TGG | 0.662732 | tig0028188:-382 | Msa1437180:intergenic |
| CAAACCTAGATTTAGCGTGT+GGG | 0.665926 | tig0028188:+3447 | Msa1437180:three_prime_UTR |
| AAGGTAGACATGTTCAGCTG+AGG | 0.671097 | tig0028188:-3154 | Msa1437180:intergenic |
| ACTCGCTGGGATGATAGCAT+GGG | 0.674466 | tig0028188:+3246 | Msa1437180:CDS |
| GGGTGAACGTTTGACCAACA+TGG | 0.684831 | tig0028188:+3467 | Msa1437180:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAGATAACAAAA+AGG | - | tig0028188:722-741 | Msa1437180:intergenic | 10.0% |
| !! | TAAAAAATTATTAATGATTG+GGG | - | tig0028188:928-947 | Msa1437180:intergenic | 10.0% |
| !!! | TTTTTATTTAAATCAAATGT+TGG | + | tig0028188:950-969 | Msa1437180:intron | 10.0% |
| !! | ATTATTGTATATACAACAAA+AGG | - | tig0028188:983-1002 | Msa1437180:intergenic | 15.0% |
| !! | ATGTTAGAAAATGAATATAT+AGG | + | tig0028188:1584-1603 | Msa1437180:intron | 15.0% |
| !! | GAAAAGTTTACAAAAATTAA+GGG | - | tig0028188:1713-1732 | Msa1437180:intergenic | 15.0% |
| !! | AGAAAAGTTTACAAAAATTA+AGG | - | tig0028188:1714-1733 | Msa1437180:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATCCTTT+AGG | - | tig0028188:1988-2007 | Msa1437180:intergenic | 15.0% |
| !!! | AAGGATTTTTTTTTTTTTGA+AGG | + | tig0028188:1989-2008 | Msa1437180:intron | 15.0% |
| !!! | AGGATTTTTTTTTTTTTGAA+GGG | + | tig0028188:1990-2009 | Msa1437180:intron | 15.0% |
| !!! | TTCTTAATATGCTTTAAAAA+AGG | + | tig0028188:2027-2046 | Msa1437180:intron | 15.0% |
| !! | TAATTTAATGAACAATTCTT+TGG | - | tig0028188:2369-2388 | Msa1437180:intergenic | 15.0% |
| !! | ATATTTGTAAATGGTAAAAA+TGG | - | tig0028188:2703-2722 | Msa1437180:intergenic | 15.0% |
| !!! | TTAATTTAATTTTACCATGT+TGG | - | tig0028188:3484-3503 | Msa1437180:intergenic | 15.0% |
| !!! | ATACAATACTATTTTATTGC+AGG | + | tig0028188:342-361 | Msa1437180:intron | 20.0% |
| !!! | TGCTTTAGATTTATTATTCT+TGG | + | tig0028188:654-673 | Msa1437180:intron | 20.0% |
| !! | TAGATTTATTATTCTTGGTT+TGG | + | tig0028188:659-678 | Msa1437180:intron | 20.0% |
| !!! | ATCTTTTTTATTTTCACGTA+TGG | + | tig0028188:729-748 | Msa1437180:intron | 20.0% |
| !! | AACTGATTATAGCAAATTAT+GGG | - | tig0028188:798-817 | Msa1437180:intergenic | 20.0% |
| !! | CAAAAAGATATTCCTTAATA+TGG | + | tig0028188:1161-1180 | Msa1437180:intron | 20.0% |
| !!! | TTTGGTTGTTGTTATATAAA+AGG | + | tig0028188:2101-2120 | Msa1437180:intron | 20.0% |
| !!! | TTGGTTGTTGTTATATAAAA+GGG | + | tig0028188:2102-2121 | Msa1437180:intron | 20.0% |
| !!! | AATTTTAATGCCATTTTTCT+TGG | + | tig0028188:2155-2174 | Msa1437180:intron | 20.0% |
| !! | AACTAATTTACCAAGAAAAA+TGG | - | tig0028188:2168-2187 | Msa1437180:intergenic | 20.0% |
| !! | AGAACATAATAAGAAATGAA+GGG | - | tig0028188:2590-2609 | Msa1437180:intergenic | 20.0% |
| !!! | TGTCTATTGATTTTATCTTT+TGG | + | tig0028188:2733-2752 | Msa1437180:intron | 20.0% |
| !! | CACTGTTAGAGTATTTAAAA+GGG | + | tig0028188:494-513 | Msa1437180:CDS | 25.0% |
| !! | ACTGTTAGAGTATTTAAAAG+GGG | + | tig0028188:495-514 | Msa1437180:CDS | 25.0% |
| !!! | ATTATTCTTGGTTTGGTTAA+TGG | + | tig0028188:666-685 | Msa1437180:intron | 25.0% |
| !!! | TTTTATTTTCACGTATGGTA+TGG | + | tig0028188:734-753 | Msa1437180:intron | 25.0% |
| !!! | TTTATTTTCACGTATGGTAT+GGG | + | tig0028188:735-754 | Msa1437180:intron | 25.0% |
| ! | ACTGATTATAGCAAATTATG+GGG | - | tig0028188:797-816 | Msa1437180:intergenic | 25.0% |
| ! | CAACTGATTATAGCAAATTA+TGG | - | tig0028188:799-818 | Msa1437180:intergenic | 25.0% |
| !!! | CATAATTTGCTATAATCAGT+TGG | + | tig0028188:797-816 | Msa1437180:intron | 25.0% |
| ! | AGATTTACATTTCAAAACAG+AGG | - | tig0028188:1021-1040 | Msa1437180:intergenic | 25.0% |
| !! | AATTTGTTCCGAGTATAATA+TGG | + | tig0028188:1054-1073 | Msa1437180:intron | 25.0% |
| ! | AAAGATATTCCTTAATATGG+AGG | + | tig0028188:1164-1183 | Msa1437180:intron | 25.0% |
| ! | TTAATGTTTCTCTTATGTTG+CGG | + | tig0028188:1268-1287 | Msa1437180:intron | 25.0% |
| ! | TGAATATATAGGATATCACA+TGG | + | tig0028188:1595-1614 | Msa1437180:intron | 25.0% |
| ! | TATCACATGGAAATTTAAGA+AGG | + | tig0028188:1608-1627 | Msa1437180:intron | 25.0% |
| ! | CGATTTACCATATTGTTAAA+TGG | + | tig0028188:1809-1828 | Msa1437180:intron | 25.0% |
| ! | TTTCTCACCATTTAACAATA+TGG | - | tig0028188:1819-1838 | Msa1437180:intergenic | 25.0% |
| ! | TATTGTTAAATGGTGAGAAA+CGG | + | tig0028188:1819-1838 | Msa1437180:intron | 25.0% |
| ! | TCATTTGATACTTATGAACA+AGG | - | tig0028188:1893-1912 | Msa1437180:intergenic | 25.0% |
| ! | GAACATAATAAGAAATGAAG+GGG | - | tig0028188:2589-2608 | Msa1437180:intergenic | 25.0% |
| ! | CAGAACATAATAAGAAATGA+AGG | - | tig0028188:2591-2610 | Msa1437180:intergenic | 25.0% |
| ! | TCACATCTCATATTTGTAAA+TGG | - | tig0028188:2712-2731 | Msa1437180:intergenic | 25.0% |
| ! | GATTTATACGTTGTAATTTC+AGG | + | tig0028188:2769-2788 | Msa1437180:intron | 25.0% |
| ! | AATGTTTAAGAATCACCTTA+GGG | - | tig0028188:2973-2992 | Msa1437180:intergenic | 25.0% |
| AATCTTGCTACCAATTTAGT+TGG | + | tig0028188:99-118 | Msa1437180:CDS | 30.0% | |
| TTGACTATCAACTTCAAGAA+AGG | - | tig0028188:309-328 | Msa1437180:intergenic | 30.0% | |
| TCAGGTTTAGTCATATCTAT+TGG | + | tig0028188:433-452 | Msa1437180:intron | 30.0% | |
| ! | AGTCATATCTATTGGTGATT+TGG | + | tig0028188:441-460 | Msa1437180:CDS | 30.0% |
| ! | ATTTGGTAGATTCTTTGAAG+AGG | + | tig0028188:458-477 | Msa1437180:CDS | 30.0% |
| ! | TTTGGTAGATTCTTTGAAGA+GGG | + | tig0028188:459-478 | Msa1437180:CDS | 30.0% |
| ! | GCACTGTTAGAGTATTTAAA+AGG | + | tig0028188:493-512 | Msa1437180:CDS | 30.0% |
| !! | AAAGGCAATACCTTTAAAGT+GGG | - | tig0028188:625-644 | Msa1437180:intergenic | 30.0% |
| !! | ATAAATCTAAAGCACTGCTT+AGG | - | tig0028188:648-667 | Msa1437180:intergenic | 30.0% |
| ! | TTATTTTCACGTATGGTATG+GGG | + | tig0028188:736-755 | Msa1437180:intron | 30.0% |
| CTGATTATAGCAAATTATGG+GGG | - | tig0028188:796-815 | Msa1437180:intergenic | 30.0% | |
| TATGAACTCAAAACATGACA+AGG | - | tig0028188:880-899 | Msa1437180:intergenic | 30.0% | |
| TTTACATTTCAAAACAGAGG+AGG | - | tig0028188:1018-1037 | Msa1437180:intergenic | 30.0% | |
| TGAGAGTTCCATATTATACT+CGG | - | tig0028188:1065-1084 | Msa1437180:intergenic | 30.0% | |
| AATACTCATAGAAACTCAAC+AGG | - | tig0028188:1226-1245 | Msa1437180:intergenic | 30.0% | |
| TGTTGAGTTTCTATGAGTAT+TGG | + | tig0028188:1225-1244 | Msa1437180:intron | 30.0% | |
| GTTGAGTTTCTATGAGTATT+GGG | + | tig0028188:1226-1245 | Msa1437180:intron | 30.0% | |
| !!! | CATTTTTTTATTCAACCGCA+CGG | - | tig0028188:1336-1355 | Msa1437180:intergenic | 30.0% |
| GCAAAAAACTGCATTTGATT+CGG | - | tig0028188:1371-1390 | Msa1437180:intergenic | 30.0% | |
| !!! | GAATCAAATGCAGTTTTTTG+CGG | + | tig0028188:1370-1389 | Msa1437180:intron | 30.0% |
| AATATCAGACAACCTACTAA+GGG | - | tig0028188:1455-1474 | Msa1437180:intergenic | 30.0% | |
| !! | TGTCTATTTCTGCATTAGTT+TGG | + | tig0028188:1486-1505 | Msa1437180:intron | 30.0% |
| TCTTGCCTAAACAATATACA+GGG | - | tig0028188:1523-1542 | Msa1437180:intergenic | 30.0% | |
| !! | CATTTTATTTGCTTCCACTT+AGG | - | tig0028188:1567-1586 | Msa1437180:intergenic | 30.0% |
| ATAAGTTTGAAGACTTTGCA+GGG | - | tig0028188:1639-1658 | Msa1437180:intergenic | 30.0% | |
| TATAAGTTTGAAGACTTTGC+AGG | - | tig0028188:1640-1659 | Msa1437180:intergenic | 30.0% | |
| ! | ATTTTCTTTTATCCACTGCA+AGG | - | tig0028188:1738-1757 | Msa1437180:intergenic | 30.0% |
| TTGCAGTGGATAAAAGAAAA+TGG | + | tig0028188:1737-1756 | Msa1437180:intron | 30.0% | |
| TGCAGTGGATAAAAGAAAAT+GGG | + | tig0028188:1738-1757 | Msa1437180:intron | 30.0% | |
| CAACATCGCAATCATATTAT+CGG | + | tig0028188:1951-1970 | Msa1437180:intron | 30.0% | |
| !!! | TTTTTTGAAGGGAATGCTTA+AGG | + | tig0028188:2001-2020 | Msa1437180:intron | 30.0% |
| ! | TGTCAGAGTTACTACAATTT+TGG | - | tig0028188:2134-2153 | Msa1437180:intergenic | 30.0% |
| TTAAGAATTGCAGAGAAGAA+AGG | + | tig0028188:2498-2517 | Msa1437180:intron | 30.0% | |
| TAAGAATTGCAGAGAAGAAA+GGG | + | tig0028188:2499-2518 | Msa1437180:intron | 30.0% | |
| TTCTCTGGCAATAGAATTAA+AGG | + | tig0028188:2826-2845 | Msa1437180:CDS | 30.0% | |
| TCTCTGGCAATAGAATTAAA+GGG | + | tig0028188:2827-2846 | Msa1437180:CDS | 30.0% | |
| AAAAGTAAGAAGTTGAGAGA+AGG | - | tig0028188:2936-2955 | Msa1437180:intergenic | 30.0% | |
| GAATGTTTAAGAATCACCTT+AGG | - | tig0028188:2974-2993 | Msa1437180:intergenic | 30.0% | |
| !! | TACTCTTTTTGCTTGATTTG+TGG | + | tig0028188:3079-3098 | Msa1437180:intron | 30.0% |
| !! | AAATTATTTCTATGACTCGC+TGG | + | tig0028188:3232-3251 | Msa1437180:CDS | 30.0% |
| !! | AATTATTTCTATGACTCGCT+GGG | + | tig0028188:3233-3252 | Msa1437180:CDS | 30.0% |
| GTTGAATTGTTTGAATTGCT+TGG | + | tig0028188:3288-3307 | Msa1437180:CDS | 30.0% | |
| ATTGTTTGAATTGCTTGGTT+TGG | + | tig0028188:3293-3312 | Msa1437180:CDS | 30.0% | |
| ! | GCATTTTCATCCAAATCTTT+AGG | - | tig0028188:3378-3397 | Msa1437180:intergenic | 30.0% |
| !!! | ATCTGGGTTTTGATTTTAAC+TGG | + | tig0028188:3422-3441 | Msa1437180:exon | 30.0% |
| !!! | TAAGATTGTGCTTTTTTCTG+TGG | + | tig0028188:3505-3524 | Msa1437180:three_prime_UTR | 30.0% |
| TTGCTACCAATTTAGTTGGA+GGG | + | tig0028188:103-122 | Msa1437180:CDS | 35.0% | |
| ACAAATCCCTCCAACTAAAT+TGG | - | tig0028188:112-131 | Msa1437180:intergenic | 35.0% | |
| ! | TTCTCTCGGAAAGGTATATA+TGG | - | tig0028188:222-241 | Msa1437180:intergenic | 35.0% |
| TGACTTCTTCTAACTTCTCT+CGG | - | tig0028188:236-255 | Msa1437180:intergenic | 35.0% | |
| ATCATACAGCTGCTTCAATT+TGG | + | tig0028188:388-407 | Msa1437180:CDS | 35.0% | |
| TGGTTGTTATAGCAGATATG+TGG | + | tig0028188:408-427 | Msa1437180:intron | 35.0% | |
| TATAGCAGATATGTGGTATC+AGG | + | tig0028188:415-434 | Msa1437180:intron | 35.0% | |
| TATCGCATTTCCTGTATTGT+TGG | - | tig0028188:591-610 | Msa1437180:intergenic | 35.0% | |
| ! | GAAAGGCAATACCTTTAAAG+TGG | - | tig0028188:626-645 | Msa1437180:intergenic | 35.0% |
| AATGGCACATTCAAAAGATC+TGG | + | tig0028188:684-703 | Msa1437180:intron | 35.0% | |
| ! | TATTTTCACGTATGGTATGG+GGG | + | tig0028188:737-756 | Msa1437180:intron | 35.0% |
| !! | GACAAGGTATTTTTGAAAGC+AGG | - | tig0028188:864-883 | Msa1437180:intergenic | 35.0% |
| CAAATAGAAAACAGAGAAGC+AGG | - | tig0028188:1195-1214 | Msa1437180:intergenic | 35.0% | |
| CGTGCGGTTGAATAAAAAAA+TGG | + | tig0028188:1334-1353 | Msa1437180:intron | 35.0% | |
| !! | CATTTGATTCGGATGTAATC+AGG | - | tig0028188:1360-1379 | Msa1437180:intergenic | 35.0% |
| !!! | AATGCAGTTTTTTGCGGTTT+CGG | + | tig0028188:1376-1395 | Msa1437180:intron | 35.0% |
| CAAATAGAAAAACCGTGAAC+CGG | - | tig0028188:1413-1432 | Msa1437180:intergenic | 35.0% | |
| GAATATCAGACAACCTACTA+AGG | - | tig0028188:1456-1475 | Msa1437180:intergenic | 35.0% | |
| !! | CTATTTCTGCATTAGTTTGG+CGG | + | tig0028188:1489-1508 | Msa1437180:intron | 35.0% |
| AGTACCCCTGTATATTGTTT+AGG | + | tig0028188:1515-1534 | Msa1437180:intron | 35.0% | |
| CTTGCCTAAACAATATACAG+GGG | - | tig0028188:1522-1541 | Msa1437180:intergenic | 35.0% | |
| CTCTTGCCTAAACAATATAC+AGG | - | tig0028188:1524-1543 | Msa1437180:intergenic | 35.0% | |
| TTGTTTAGGCAAGAGATGTT+TGG | + | tig0028188:1529-1548 | Msa1437180:intron | 35.0% | |
| ! | TAAACTTTTCTTCCTTGCAG+TGG | + | tig0028188:1723-1742 | Msa1437180:intron | 35.0% |
| GCAGTGGATAAAAGAAAATG+GGG | + | tig0028188:1739-1758 | Msa1437180:intron | 35.0% | |
| CAATGAGAATTGTTGTACGA+TGG | - | tig0028188:1916-1935 | Msa1437180:intergenic | 35.0% | |
| CGATAATATGATTGCGATGT+TGG | - | tig0028188:1953-1972 | Msa1437180:intergenic | 35.0% | |
| ! | TCATATTATCGGCTAAAGCA+TGG | + | tig0028188:1962-1981 | Msa1437180:intron | 35.0% |
| AAACCTTATCTCACTAAGTG+GGG | - | tig0028188:2084-2103 | Msa1437180:intergenic | 35.0% | |
| CAAACCTTATCTCACTAAGT+GGG | - | tig0028188:2085-2104 | Msa1437180:intergenic | 35.0% | |
| CATGACTCATGTGAATACAT+GGG | - | tig0028188:2225-2244 | Msa1437180:intergenic | 35.0% | |
| ACATGACTCATGTGAATACA+TGG | - | tig0028188:2226-2245 | Msa1437180:intergenic | 35.0% | |
| AGAATCGTATAAGCTGAACT+TGG | + | tig0028188:2399-2418 | Msa1437180:intron | 35.0% | |
| ! | AATGTACAGAAGTGTGTGAT+AGG | + | tig0028188:2460-2479 | Msa1437180:intron | 35.0% |
| ! | GTGGCATTAAGCATTGTTAT+CGG | - | tig0028188:2559-2578 | Msa1437180:intergenic | 35.0% |
| GAAATGAAGGGGTAAAATAG+TGG | - | tig0028188:2578-2597 | Msa1437180:intergenic | 35.0% | |
| ATACAAATACAACGTGCTCA+TGG | - | tig0028188:2637-2656 | Msa1437180:intergenic | 35.0% | |
| AAAACAGCAGCACAAAAAGT+TGG | - | tig0028188:2803-2822 | Msa1437180:intergenic | 35.0% | |
| !! | AACTTTTTGTGCTGCTGTTT+TGG | + | tig0028188:2802-2821 | Msa1437180:CDS | 35.0% |
| TTAAGAATCACCTTAGGGTA+CGG | - | tig0028188:2968-2987 | Msa1437180:intergenic | 35.0% | |
| CTTGCTACCAATTTAGTTGG+AGG | + | tig0028188:102-121 | Msa1437180:CDS | 40.0% | |
| TCTTCTAACTTCTCTCGGAA+AGG | - | tig0028188:231-250 | Msa1437180:intergenic | 40.0% | |
| GTTAGAAGAAGTCATTCCGA+AGG | + | tig0028188:242-261 | Msa1437180:CDS | 40.0% | |
| ! | CATTTTGCATCTGCTTCCTT+CGG | - | tig0028188:261-280 | Msa1437180:intergenic | 40.0% |
| GAAGGAAGCAGATGCAAAAT+GGG | + | tig0028188:260-279 | Msa1437180:CDS | 40.0% | |
| !! | TTTGAAGAGGGTATCACTCT+CGG | + | tig0028188:471-490 | Msa1437180:CDS | 40.0% |
| ACCCTAATACAAGAATGCTC+AGG | + | tig0028188:530-549 | Msa1437180:CDS | 40.0% | |
| CCCTGAGCATTCTTGTATTA+GGG | - | tig0028188:534-553 | Msa1437180:intergenic | 40.0% | |
| CCCTAATACAAGAATGCTCA+GGG | + | tig0028188:531-550 | Msa1437180:CDS | 40.0% | |
| TCCCTGAGCATTCTTGTATT+AGG | - | tig0028188:535-554 | Msa1437180:intergenic | 40.0% | |
| AGTCATCGTACCCACTTTAA+AGG | + | tig0028188:612-631 | Msa1437180:CDS | 40.0% | |
| !! | TCTAAAGCACTGCTTAGGAA+AGG | - | tig0028188:643-662 | Msa1437180:intergenic | 40.0% |
| AAATTATGGGGGCAAGTAGA+AGG | - | tig0028188:785-804 | Msa1437180:intergenic | 40.0% | |
| GCTATAATCAGTTGGCTACA+AGG | + | tig0028188:805-824 | Msa1437180:intron | 40.0% | |
| !!! | GTTTTGAGTTCATAGAGTCC+TGG | + | tig0028188:886-905 | Msa1437180:intron | 40.0% |
| CAGGACTAACCTCCATATTA+AGG | - | tig0028188:1176-1195 | Msa1437180:intergenic | 40.0% | |
| !! | AGTTTCTATGAGTATTGGGC+TGG | + | tig0028188:1230-1249 | Msa1437180:intron | 40.0% |
| !! | GTTTCTATGAGTATTGGGCT+GGG | + | tig0028188:1231-1250 | Msa1437180:intron | 40.0% |
| GTTTCTCTTATGTTGCGGTT+TGG | + | tig0028188:1273-1292 | Msa1437180:intron | 40.0% | |
| !! | ATGTTGCGGTTTGGTTCATT+TGG | + | tig0028188:1282-1301 | Msa1437180:intron | 40.0% |
| ! | TTTTATTCAACCGCACGGTT+TGG | - | tig0028188:1331-1350 | Msa1437180:intergenic | 40.0% |
| !!! | AGTTTTTTGCGGTTTCGGTT+TGG | + | tig0028188:1381-1400 | Msa1437180:intron | 40.0% |
| !!! | GTTTTTTGCGGTTTCGGTTT+GGG | + | tig0028188:1382-1401 | Msa1437180:intron | 40.0% |
| ! | CGGTTCACGGTTTTTCTATT+TGG | + | tig0028188:1411-1430 | Msa1437180:intron | 40.0% |
| !!! | CAGTTTTGAACACCCTTAGT+AGG | + | tig0028188:1440-1459 | Msa1437180:intron | 40.0% |
| CAGAAATAGACAGCATGAAG+AGG | - | tig0028188:1478-1497 | Msa1437180:intergenic | 40.0% | |
| TGCTTCCACTTAGGTATCAA+GGG | - | tig0028188:1558-1577 | Msa1437180:intergenic | 40.0% | |
| TTGCTTCCACTTAGGTATCA+AGG | - | tig0028188:1559-1578 | Msa1437180:intergenic | 40.0% | |
| GACAAACAAATCGCATGTTG+TGG | - | tig0028188:1868-1887 | Msa1437180:intergenic | 40.0% | |
| ATTCCCCACTTAGTGAGATA+AGG | + | tig0028188:2078-2097 | Msa1437180:intron | 40.0% | |
| CCAAACCTTATCTCACTAAG+TGG | - | tig0028188:2086-2105 | Msa1437180:intergenic | 40.0% | |
| CCACTTAGTGAGATAAGGTT+TGG | + | tig0028188:2083-2102 | Msa1437180:intron | 40.0% | |
| AGTCCAGATATTCACGAAGA+GGG | + | tig0028188:2529-2548 | Msa1437180:intron | 40.0% | |
| ATTCCCTCTTCGTGAATATC+TGG | - | tig0028188:2535-2554 | Msa1437180:intergenic | 40.0% | |
| ! | TCTGTTCGCGCTTTCTATTT+TGG | + | tig0028188:2607-2626 | Msa1437180:intron | 40.0% |
| ATACAGTTTAGTCGTCTGGA+TGG | - | tig0028188:2677-2696 | Msa1437180:intergenic | 40.0% | |
| CATGCTGGTATTGCAATACT+TGG | + | tig0028188:2872-2891 | Msa1437180:CDS | 40.0% | |
| TAACCACCTGCAAAACAGAT+AGG | + | tig0028188:3041-3060 | Msa1437180:intron | 40.0% | |
| ! | CAAGAACCTATCTGTTTTGC+AGG | - | tig0028188:3050-3069 | Msa1437180:intergenic | 40.0% |
| ! | GCTTTTCGAATCTGGTTAAC+AGG | - | tig0028188:3135-3154 | Msa1437180:intergenic | 40.0% |
| ! | CAAGATTTCCATTTTGCAGG+AGG | - | tig0028188:3182-3201 | Msa1437180:intergenic | 40.0% |
| ! | CCACAAGATTTCCATTTTGC+AGG | - | tig0028188:3185-3204 | Msa1437180:intergenic | 40.0% |
| CCTGCAAAATGGAAATCTTG+TGG | + | tig0028188:3182-3201 | Msa1437180:CDS | 40.0% | |
| !! | GTTTGAATTGCTTGGTTTGG+AGG | + | tig0028188:3296-3315 | Msa1437180:CDS | 40.0% |
| ATCTTTAGGCTTCTTAGCGT+TGG | - | tig0028188:3364-3383 | Msa1437180:intergenic | 40.0% | |
| CGCTAAGAAGCCTAAAGATT+TGG | + | tig0028188:3365-3384 | Msa1437180:CDS | 40.0% | |
| CAAACCTAGATTTAGCGTGT+GGG | + | tig0028188:3447-3466 | Msa1437180:three_prime_UTR | 40.0% | |
| AGGGATTTGTAAGCAAGCTG+TGG | + | tig0028188:122-141 | Msa1437180:CDS | 45.0% | |
| TAAGCAAGCTGTGGAGAAGA+TGG | + | tig0028188:131-150 | Msa1437180:CDS | 45.0% | |
| CGAAGGAAGCAGATGCAAAA+TGG | + | tig0028188:259-278 | Msa1437180:CDS | 45.0% | |
| GAAGCAGCTGTATGATGTGT+GGG | - | tig0028188:384-403 | Msa1437180:intergenic | 45.0% | |
| TGAAGCAGCTGTATGATGTG+TGG | - | tig0028188:385-404 | Msa1437180:intergenic | 45.0% | |
| TGTATTGTTGGAGAACCCAC+AGG | - | tig0028188:579-598 | Msa1437180:intergenic | 45.0% | |
| TGTGGGTTCTCCAACAATAC+AGG | + | tig0028188:578-597 | Msa1437180:CDS | 45.0% | |
| AGTTGGCTACAAGGTAAGAC+TGG | + | tig0028188:814-833 | Msa1437180:intron | 45.0% | |
| GCTTCCACTTAGGTATCAAG+GGG | - | tig0028188:1557-1576 | Msa1437180:intergenic | 45.0% | |
| GAGTCCAGATATTCACGAAG+AGG | + | tig0028188:2528-2547 | Msa1437180:intron | 45.0% | |
| TTTAGTCGTCTGGATGGCAT+GGG | - | tig0028188:2671-2690 | Msa1437180:intergenic | 45.0% | |
| GCTCATACAGTTTAGTCGTC+TGG | - | tig0028188:2681-2700 | Msa1437180:intergenic | 45.0% | |
| !!! | TGCTGCTGTTTTGGATTCTC+TGG | + | tig0028188:2811-2830 | Msa1437180:CDS | 45.0% |
| TGCAATACCAGCATGCAACT+TGG | - | tig0028188:2867-2886 | Msa1437180:intergenic | 45.0% | |
| TCTTGTTCATCCGTACCCTA+AGG | + | tig0028188:2955-2974 | Msa1437180:CDS | 45.0% | |
| ! | GAACCTATCTGTTTTGCAGG+TGG | - | tig0028188:3047-3066 | Msa1437180:intergenic | 45.0% |
| AAGGTAGACATGTTCAGCTG+AGG | - | tig0028188:3157-3176 | Msa1437180:intergenic | 45.0% | |
| TACCTTGTCCTCCTGCAAAA+TGG | + | tig0028188:3171-3190 | Msa1437180:CDS | 45.0% | |
| ! | TTCCATTTTGCAGGAGGACA+AGG | - | tig0028188:3176-3195 | Msa1437180:intergenic | 45.0% |
| !! | TGAATTGCTTGGTTTGGAGG+TGG | + | tig0028188:3299-3318 | Msa1437180:CDS | 45.0% |
| !! | GAATTGCTTGGTTTGGAGGT+GGG | + | tig0028188:3300-3319 | Msa1437180:CDS | 45.0% |
| !! | AATTGCTTGGTTTGGAGGTG+GGG | + | tig0028188:3301-3320 | Msa1437180:CDS | 45.0% |
| TCATCTCTCAAGAACGGTGA+TGG | + | tig0028188:3324-3343 | Msa1437180:CDS | 45.0% | |
| TCCTCATTAGTCGAGTCATC+TGG | + | tig0028188:3405-3424 | Msa1437180:CDS | 45.0% | |
| CCTCATTAGTCGAGTCATCT+GGG | + | tig0028188:3406-3425 | Msa1437180:CDS | 45.0% | |
| GCAAACCTAGATTTAGCGTG+TGG | + | tig0028188:3446-3465 | Msa1437180:three_prime_UTR | 45.0% | |
| TTCACCCACACGCTAAATCT+AGG | - | tig0028188:3454-3473 | Msa1437180:intergenic | 45.0% | |
| !! | TTAAAAAATTATTAATGATT+GGG | - | tig0028188:929-948 | Msa1437180:intergenic | 5.0% |
| !! | ATTAAAAAATTATTAATGAT+TGG | - | tig0028188:930-949 | Msa1437180:intergenic | 5.0% |
| TGCTGTCAGTTGACATCCTG+TGG | + | tig0028188:560-579 | Msa1437180:CDS | 50.0% | |
| GCTGTCAGTTGACATCCTGT+GGG | + | tig0028188:561-580 | Msa1437180:CDS | 50.0% | |
| TTCACGTATGGTATGGGGGT+TGG | + | tig0028188:741-760 | Msa1437180:intron | 50.0% | |
| ! | AAGGTAAGACTGGTCCCCAT+AGG | + | tig0028188:824-843 | Msa1437180:intron | 50.0% |
| TCCTTCAACTGCGACCTATG+GGG | - | tig0028188:841-860 | Msa1437180:intergenic | 50.0% | |
| GTCCTTCAACTGCGACCTAT+GGG | - | tig0028188:842-861 | Msa1437180:intergenic | 50.0% | |
| !! | GGTTAAAGAGAGTGCTGACC+AGG | - | tig0028188:907-926 | Msa1437180:intergenic | 50.0% |
| ACAAACCGAACCAAACCGTG+CGG | + | tig0028188:1318-1337 | Msa1437180:intron | 50.0% | |
| !! | TTCAACCGCACGGTTTGGTT+CGG | - | tig0028188:1326-1345 | Msa1437180:intergenic | 50.0% |
| !! | GGTTTCGGTTTGGGTTGATC+CGG | + | tig0028188:1391-1410 | Msa1437180:intron | 50.0% |
| !! | GTTTGGGTTGATCCGGTTCA+CGG | + | tig0028188:1398-1417 | Msa1437180:intron | 50.0% |
| GGTACCCCTTGATACCTAAG+TGG | + | tig0028188:1550-1569 | Msa1437180:intron | 50.0% | |
| TCGGCTAAAGCATGGCCTAA+AGG | + | tig0028188:1970-1989 | Msa1437180:intron | 50.0% | |
| TTAGTCGTCTGGATGGCATG+GGG | - | tig0028188:2670-2689 | Msa1437180:intergenic | 50.0% | |
| GTTTAGTCGTCTGGATGGCA+TGG | - | tig0028188:2672-2691 | Msa1437180:intergenic | 50.0% | |
| GACTTCTCCAAGTTGCATGC+TGG | + | tig0028188:2857-2876 | Msa1437180:CDS | 50.0% | |
| !! | GCTCTCGTATGGATTGGTTC+TGG | - | tig0028188:2914-2933 | Msa1437180:intergenic | 50.0% |
| GAGAAGGCTCTCGTATGGAT+TGG | - | tig0028188:2920-2939 | Msa1437180:intergenic | 50.0% | |
| GTTGAGAGAAGGCTCTCGTA+TGG | - | tig0028188:2925-2944 | Msa1437180:intergenic | 50.0% | |
| ! | CAGCTGAGGCTTTTCGAATC+TGG | - | tig0028188:3143-3162 | Msa1437180:intergenic | 50.0% |
| ACTCGCTGGGATGATAGCAT+GGG | + | tig0028188:3246-3265 | Msa1437180:CDS | 50.0% | |
| GTGGGGTCATCTCTCAAGAA+CGG | + | tig0028188:3318-3337 | Msa1437180:CDS | 50.0% | |
| !! | AGAACGGTGATGGAGTAGCA+AGG | + | tig0028188:3334-3353 | Msa1437180:CDS | 50.0% |
| CCCAGATGACTCGACTAATG+AGG | - | tig0028188:3409-3428 | Msa1437180:intergenic | 50.0% | |
| GGGTGAACGTTTGACCAACA+TGG | + | tig0028188:3467-3486 | Msa1437180:three_prime_UTR | 50.0% | |
| TCCCCATAGGTCGCAGTTGA+AGG | + | tig0028188:837-856 | Msa1437180:intron | 55.0% | |
| GGTCCTTCAACTGCGACCTA+TGG | - | tig0028188:843-862 | Msa1437180:intergenic | 55.0% | |
| !! | GCACGGTTTGGTTCGGTTTG+TGG | - | tig0028188:1319-1338 | Msa1437180:intergenic | 55.0% |
| GACTCGCTGGGATGATAGCA+TGG | + | tig0028188:3245-3264 | Msa1437180:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028188 | gene | 60 | 3601 | 60 | ID=Msa1437180;Name=Msa1437180 |
| tig0028188 | mRNA | 60 | 3601 | 60 | ID=Msa1437180-mRNA-1;Parent=Msa1437180;Name=Msa1437180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.5|0.4|1|0.75|0.4|5|167|314 |
| tig0028188 | exon | 60 | 284 | 60 | ID=Msa1437180-mRNA-1:exon:10518;Parent=Msa1437180-mRNA-1 |
| tig0028188 | exon | 364 | 409 | 364 | ID=Msa1437180-mRNA-1:exon:10519;Parent=Msa1437180-mRNA-1 |
| tig0028188 | exon | 437 | 633 | 437 | ID=Msa1437180-mRNA-1:exon:10520;Parent=Msa1437180-mRNA-1 |
| tig0028188 | exon | 2791 | 2976 | 2791 | ID=Msa1437180-mRNA-1:exon:10521;Parent=Msa1437180-mRNA-1 |
| tig0028188 | exon | 3144 | 3601 | 3144 | ID=Msa1437180-mRNA-1:exon:10522;Parent=Msa1437180-mRNA-1 |
| tig0028188 | CDS | 60 | 284 | 60 | ID=Msa1437180-mRNA-1:cds;Parent=Msa1437180-mRNA-1 |
| tig0028188 | CDS | 364 | 409 | 364 | ID=Msa1437180-mRNA-1:cds;Parent=Msa1437180-mRNA-1 |
| tig0028188 | CDS | 437 | 633 | 437 | ID=Msa1437180-mRNA-1:cds;Parent=Msa1437180-mRNA-1 |
| tig0028188 | CDS | 2791 | 2976 | 2791 | ID=Msa1437180-mRNA-1:cds;Parent=Msa1437180-mRNA-1 |
| tig0028188 | CDS | 3144 | 3434 | 3144 | ID=Msa1437180-mRNA-1:cds;Parent=Msa1437180-mRNA-1 |
| tig0028188 | three_prime_UTR | 3435 | 3601 | 3435 | ID=Msa1437180-mRNA-1:three_prime_utr;Parent=Msa1437180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
