Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604360 | XP_013455414.1 | 98.988 | 494 | 5 | 0 | 1 | 494 | 1 | 494 | 0.0 | 999 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604360 | sp|Q8VYT5|FB254_ARATH | 58.717 | 499 | 178 | 8 | 1 | 494 | 1 | 476 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005710 | Msa0604360 | 0.803732 | 3.028909e-49 | -8.615850e-47 |
| Msa0008830 | Msa0604360 | 0.816430 | 5.551951e-52 | -8.615850e-47 |
| Msa0011850 | Msa0604360 | 0.815858 | 7.452070e-52 | -8.615850e-47 |
| Msa0024680 | Msa0604360 | 0.801436 | 9.011652e-49 | -8.615850e-47 |
| Msa0027540 | Msa0604360 | 0.828837 | 7.200989e-55 | -8.615850e-47 |
| Msa0028060 | Msa0604360 | 0.800741 | 1.250244e-48 | -8.615850e-47 |
| Msa0029540 | Msa0604360 | -0.827478 | 1.530047e-54 | -8.615850e-47 |
| Msa0030000 | Msa0604360 | 0.800719 | 1.262986e-48 | -8.615850e-47 |
| Msa0030590 | Msa0604360 | 0.803553 | 3.299311e-49 | -8.615850e-47 |
| Msa0032840 | Msa0604360 | -0.806395 | 8.401030e-50 | -8.615850e-47 |
| Msa0044020 | Msa0604360 | 0.822817 | 1.934047e-53 | -8.615850e-47 |
| Msa0046750 | Msa0604360 | 0.829404 | 5.247840e-55 | -8.615850e-47 |
| Msa0050430 | Msa0604360 | 0.800119 | 1.673653e-48 | -8.615850e-47 |
| Msa0050940 | Msa0604360 | 0.806047 | 9.944472e-50 | -8.615850e-47 |
| Msa0054640 | Msa0604360 | 0.800273 | 1.556766e-48 | -8.615850e-47 |
| Msa0068060 | Msa0604360 | 0.819416 | 1.175002e-52 | -8.615850e-47 |
| Msa0075310 | Msa0604360 | 0.829779 | 4.253109e-55 | -8.615850e-47 |
| Msa0090590 | Msa0604360 | 0.822953 | 1.797722e-53 | -8.615850e-47 |
| Msa0091770 | Msa0604360 | 0.808527 | 2.963851e-50 | -8.615850e-47 |
| Msa0096670 | Msa0604360 | 0.837350 | 5.473303e-57 | -8.615850e-47 |
| Msa0101810 | Msa0604360 | -0.810886 | 9.220459e-51 | -8.615850e-47 |
| Msa0105340 | Msa0604360 | 0.803838 | 2.879832e-49 | -8.615850e-47 |
| Msa0105420 | Msa0604360 | 0.867278 | 1.539902e-65 | -8.615850e-47 |
| Msa0109950 | Msa0604360 | 0.812648 | 3.813456e-51 | -8.615850e-47 |
| Msa0114540 | Msa0604360 | -0.806973 | 6.340261e-50 | -8.615850e-47 |
| Msa0120330 | Msa0604360 | 0.829281 | 5.618782e-55 | -8.615850e-47 |
| Msa0604360 | Msa0618040 | 0.801475 | 8.848226e-49 | -8.615850e-47 |
| Msa0604360 | Msa0621890 | 0.815601 | 8.502037e-52 | -8.615850e-47 |
| Msa0604360 | Msa0624730 | 0.810524 | 1.104190e-50 | -8.615850e-47 |
| Msa0604360 | Msa0625530 | -0.822274 | 2.585446e-53 | -8.615850e-47 |
| Msa0604360 | Msa0636180 | 0.870422 | 1.476751e-66 | -8.615850e-47 |
| Msa0604360 | Msa0638280 | 0.812363 | 4.403600e-51 | -8.615850e-47 |
| Msa0604360 | Msa0638320 | 0.807042 | 6.132801e-50 | -8.615850e-47 |
| Msa0604360 | Msa0642650 | 0.801676 | 8.046036e-49 | -8.615850e-47 |
| Msa0604360 | Msa0647130 | 0.832522 | 9.010848e-56 | -8.615850e-47 |
| Msa0604360 | Msa0669850 | 0.811178 | 7.973536e-51 | -8.615850e-47 |
| Msa0604360 | Msa0670980 | 0.805496 | 1.297956e-49 | -8.615850e-47 |
| Msa0604360 | Msa0674220 | 0.818850 | 1.580291e-52 | -8.615850e-47 |
| Msa0604360 | Msa0677270 | 0.809157 | 2.173696e-50 | -8.615850e-47 |
| Msa0604360 | Msa0677400 | 0.857958 | 1.144613e-62 | -8.615850e-47 |
| Msa0604360 | Msa0681890 | 0.814805 | 1.277580e-51 | -8.615850e-47 |
| Msa0604360 | Msa0684500 | 0.807661 | 4.532478e-50 | -8.615850e-47 |
| Msa0604360 | Msa0706370 | 0.800430 | 1.446556e-48 | -8.615850e-47 |
| Msa0604360 | Msa0730180 | 0.800419 | 1.454001e-48 | -8.615850e-47 |
| Msa0604360 | Msa0741900 | 0.805101 | 1.570716e-49 | -8.615850e-47 |
| Msa0604360 | Msa0743200 | 0.820910 | 5.343091e-53 | -8.615850e-47 |
| Msa0604360 | Msa0743680 | 0.811735 | 6.032611e-51 | -8.615850e-47 |
| Msa0604360 | Msa0754720 | -0.858484 | 7.982522e-63 | -8.615850e-47 |
| Msa0604360 | Msa0756630 | -0.833274 | 5.858584e-56 | -8.615850e-47 |
| Msa0604360 | Msa0760380 | 0.839673 | 1.376800e-57 | -8.615850e-47 |
| Msa0604360 | Msa0772020 | 0.800251 | 1.573032e-48 | -8.615850e-47 |
| Msa0604360 | Msa0778320 | 0.810975 | 8.822939e-51 | -8.615850e-47 |
| Msa0604360 | Msa0787260 | 0.829690 | 4.469295e-55 | -8.615850e-47 |
| Msa0604360 | Msa0789570 | 0.803627 | 3.185881e-49 | -8.615850e-47 |
| Msa0604360 | Msa0804680 | 0.818549 | 1.849636e-52 | -8.615850e-47 |
| Msa0604360 | Msa0810020 | 0.820785 | 5.710481e-53 | -8.615850e-47 |
| Msa0604360 | Msa0822990 | 0.810756 | 9.841364e-51 | -8.615850e-47 |
| Msa0604360 | Msa0829620 | 0.822208 | 2.678814e-53 | -8.615850e-47 |
| Msa0604360 | Msa0837990 | 0.811082 | 8.363870e-51 | -8.615850e-47 |
| Msa0604360 | Msa0850960 | 0.801964 | 7.023332e-49 | -8.615850e-47 |
| Msa0604360 | Msa0862100 | 0.806399 | 8.381543e-50 | -8.615850e-47 |
| Msa0604360 | Msa0863370 | 0.825419 | 4.736164e-54 | -8.615850e-47 |
| Msa0604360 | Msa0863800 | 0.812836 | 3.469800e-51 | -8.615850e-47 |
| Msa0604360 | Msa0866120 | 0.815647 | 8.305043e-52 | -8.615850e-47 |
| Msa0604360 | Msa0867050 | -0.804225 | 2.392021e-49 | -8.615850e-47 |
| Msa0604360 | Msa0867890 | 0.808940 | 2.419711e-50 | -8.615850e-47 |
| Msa0604360 | Msa0881480 | 0.814836 | 1.257955e-51 | -8.615850e-47 |
| Msa0604360 | Msa0888530 | 0.804901 | 1.729059e-49 | -8.615850e-47 |
| Msa0604360 | Msa0890250 | 0.821878 | 3.194741e-53 | -8.615850e-47 |
| Msa0604360 | Msa0891040 | 0.803465 | 3.442118e-49 | -8.615850e-47 |
| Msa0604360 | Msa0907700 | 0.805174 | 1.516027e-49 | -8.615850e-47 |
| Msa0604360 | Msa0908170 | 0.801005 | 1.103908e-48 | -8.615850e-47 |
| Msa0604360 | Msa0925160 | 0.802022 | 6.831052e-49 | -8.615850e-47 |
| Msa0604360 | Msa0933440 | 0.809606 | 1.741523e-50 | -8.615850e-47 |
| Msa0604360 | Msa0936270 | 0.802195 | 6.296473e-49 | -8.615850e-47 |
| Msa0604360 | Msa0938430 | 0.808292 | 3.326495e-50 | -8.615850e-47 |
| Msa0604360 | Msa0951710 | 0.807978 | 3.880605e-50 | -8.615850e-47 |
| Msa0604360 | Msa0969570 | 0.804373 | 2.228963e-49 | -8.615850e-47 |
| Msa0604360 | Msa0969700 | 0.818466 | 1.931566e-52 | -8.615850e-47 |
| Msa0604360 | Msa0990520 | 0.826010 | 3.429293e-54 | -8.615850e-47 |
| Msa0604360 | Msa0996080 | 0.817810 | 2.718051e-52 | -8.615850e-47 |
| Msa0604360 | Msa1000300 | 0.807318 | 5.359294e-50 | -8.615850e-47 |
| Msa0604360 | Msa1008490 | 0.838734 | 2.411511e-57 | -8.615850e-47 |
| Msa0604360 | Msa1018790 | 0.805716 | 1.166947e-49 | -8.615850e-47 |
| Msa0604360 | Msa1019020 | 0.819151 | 1.349854e-52 | -8.615850e-47 |
| Msa0604360 | Msa1020710 | 0.822166 | 2.740071e-53 | -8.615850e-47 |
| Msa0604360 | Msa1036390 | 0.801002 | 1.105879e-48 | -8.615850e-47 |
| Msa0604360 | Msa1037000 | 0.815581 | 8.591490e-52 | -8.615850e-47 |
| Msa0604360 | Msa1037700 | -0.803635 | 3.173559e-49 | -8.615850e-47 |
| Msa0604360 | Msa1040120 | 0.860656 | 1.773830e-63 | -8.615850e-47 |
| Msa0604360 | Msa1040830 | 0.820486 | 6.688886e-53 | -8.615850e-47 |
| Msa0604360 | Msa1040890 | 0.804739 | 1.869799e-49 | -8.615850e-47 |
| Msa0604360 | Msa1044340 | 0.800845 | 1.190316e-48 | -8.615850e-47 |
| Msa0604360 | Msa1055260 | 0.805196 | 1.499828e-49 | -8.615850e-47 |
| Msa0604360 | Msa1055280 | 0.811959 | 5.392631e-51 | -8.615850e-47 |
| Msa0604360 | Msa1069100 | 0.820783 | 5.714440e-53 | -8.615850e-47 |
| Msa0604360 | Msa1082700 | 0.828507 | 8.652171e-55 | -8.615850e-47 |
| Msa0604360 | Msa1083210 | 0.815351 | 9.665255e-52 | -8.615850e-47 |
| Msa0604360 | Msa1087810 | 0.803066 | 4.161352e-49 | -8.615850e-47 |
| Msa0604360 | Msa1097640 | 0.811864 | 5.656855e-51 | -8.615850e-47 |
| Msa0604360 | Msa1098560 | 0.826158 | 3.162781e-54 | -8.615850e-47 |
| Msa0604360 | Msa1099030 | 0.802199 | 6.282963e-49 | -8.615850e-47 |
| Msa0604360 | Msa1104000 | 0.804701 | 1.903633e-49 | -8.615850e-47 |
| Msa0604360 | Msa1113200 | 0.801915 | 7.186996e-49 | -8.615850e-47 |
| Msa0604360 | Msa1115330 | 0.813257 | 2.804735e-51 | -8.615850e-47 |
| Msa0604360 | Msa1124680 | -0.806611 | 7.563912e-50 | -8.615850e-47 |
| Msa0604360 | Msa1127890 | 0.818952 | 1.498590e-52 | -8.615850e-47 |
| Msa0604360 | Msa1128160 | 0.816488 | 5.389809e-52 | -8.615850e-47 |
| Msa0604360 | Msa1129560 | 0.813247 | 2.818789e-51 | -8.615850e-47 |
| Msa0604360 | Msa1130210 | -0.811620 | 6.391490e-51 | -8.615850e-47 |
| Msa0604360 | Msa1139810 | 0.827833 | 1.257820e-54 | -8.615850e-47 |
| Msa0604360 | Msa1143620 | 0.814514 | 1.482073e-51 | -8.615850e-47 |
| Msa0604360 | Msa1147570 | 0.813644 | 2.305970e-51 | -8.615850e-47 |
| Msa0604360 | Msa1165360 | 0.809493 | 1.841816e-50 | -8.615850e-47 |
| Msa0604360 | Msa1171690 | 0.805230 | 1.475962e-49 | -8.615850e-47 |
| Msa0604360 | Msa1185540 | 0.806842 | 6.759237e-50 | -8.615850e-47 |
| Msa0604360 | Msa1187840 | 0.810138 | 1.337564e-50 | -8.615850e-47 |
| Msa0604360 | Msa1204120 | 0.809823 | 1.564368e-50 | -8.615850e-47 |
| Msa0604360 | Msa1217860 | 0.831767 | 1.384796e-55 | -8.615850e-47 |
| Msa0604360 | Msa1221560 | 0.845708 | 3.431124e-59 | -8.615850e-47 |
| Msa0604360 | Msa1222970 | 0.810807 | 9.590935e-51 | -8.615850e-47 |
| Msa0604360 | Msa1237030 | 0.816819 | 4.542615e-52 | -8.615850e-47 |
| Msa0604360 | Msa1240310 | 0.823329 | 1.468723e-53 | -8.615850e-47 |
| Msa0604360 | Msa1263660 | 0.806592 | 7.634275e-50 | -8.615850e-47 |
| Msa0604360 | Msa1264020 | 0.829987 | 3.785192e-55 | -8.615850e-47 |
| Msa0604360 | Msa1265070 | 0.822267 | 2.595942e-53 | -8.615850e-47 |
| Msa0604360 | Msa1265960 | 0.832324 | 1.008587e-55 | -8.615850e-47 |
| Msa0604360 | Msa1267220 | 0.802306 | 5.973057e-49 | -8.615850e-47 |
| Msa0604360 | Msa1269580 | -0.809865 | 1.531996e-50 | -8.615850e-47 |
| Msa0604360 | Msa1270610 | 0.814635 | 1.393790e-51 | -8.615850e-47 |
| Msa0604360 | Msa1271280 | 0.803578 | 3.260620e-49 | -8.615850e-47 |
| Msa0604360 | Msa1271300 | 0.802596 | 5.203649e-49 | -8.615850e-47 |
| Msa0604360 | Msa1284140 | 0.803448 | 3.468940e-49 | -8.615850e-47 |
| Msa0604360 | Msa1284300 | 0.810850 | 9.391139e-51 | -8.615850e-47 |
| Msa0604360 | Msa1309240 | 0.800070 | 1.712438e-48 | -8.615850e-47 |
| Msa0604360 | Msa1319650 | 0.804585 | 2.013292e-49 | -8.615850e-47 |
| Msa0604360 | Msa1320740 | 0.815637 | 8.346614e-52 | -8.615850e-47 |
| Msa0604360 | Msa1323060 | 0.812178 | 4.831062e-51 | -8.615850e-47 |
| Msa0604360 | Msa1329920 | 0.811213 | 7.834552e-51 | -8.615850e-47 |
| Msa0604360 | Msa1331910 | 0.814347 | 1.613590e-51 | -8.615850e-47 |
| Msa0604360 | Msa1337730 | 0.828545 | 8.468694e-55 | -8.615850e-47 |
| Msa0604360 | Msa1358550 | 0.809996 | 1.435289e-50 | -8.615850e-47 |
| Msa0604360 | Msa1362510 | 0.814258 | 1.688464e-51 | -8.615850e-47 |
| Msa0604360 | Msa1364470 | -0.807473 | 4.970060e-50 | -8.615850e-47 |
| Msa0604360 | Msa1367080 | 0.802785 | 4.758802e-49 | -8.615850e-47 |
| Msa0604360 | Msa1373510 | 0.802126 | 6.503910e-49 | -8.615850e-47 |
| Msa0604360 | Msa1385900 | 0.804615 | 1.984510e-49 | -8.615850e-47 |
| Msa0604360 | Msa1386230 | 0.805401 | 1.358947e-49 | -8.615850e-47 |
| Msa0604360 | Msa1390310 | 0.833162 | 6.246642e-56 | -8.615850e-47 |
| Msa0604360 | Msa1390770 | 0.803459 | 3.450668e-49 | -8.615850e-47 |
| Msa0604360 | Msa1405180 | 0.815764 | 7.823174e-52 | -8.615850e-47 |
| Msa0604360 | Msa1408790 | 0.807192 | 5.699429e-50 | -8.615850e-47 |
| Msa0604360 | Msa1410430 | -0.803069 | 4.156084e-49 | -8.615850e-47 |
| Msa0604360 | Msa1427060 | 0.806110 | 9.643323e-50 | -8.615850e-47 |
| Msa0604360 | Msa1427760 | 0.838376 | 2.983864e-57 | -8.615850e-47 |
| Msa0604360 | Msa1429250 | 0.802958 | 4.381367e-49 | -8.615850e-47 |
| Msa0604360 | Msa1429360 | -0.806112 | 9.634468e-50 | -8.615850e-47 |
| Msa0604360 | Msa1431000 | 0.825116 | 5.585560e-54 | -8.615850e-47 |
| Msa0604360 | Msa1439960 | 0.830346 | 3.092396e-55 | -8.615850e-47 |
| Msa0604360 | Msa1447090 | 0.818984 | 1.473805e-52 | -8.615850e-47 |
| Msa0604360 | Msa1456810 | 0.818475 | 1.922669e-52 | -8.615850e-47 |
| Msa0604360 | Msa1459180 | 0.808796 | 2.597678e-50 | -8.615850e-47 |
| Msa0604360 | Msa1459390 | 0.817783 | 2.756671e-52 | -8.615850e-47 |
| Msa0604360 | Msa1463970 | 0.815672 | 8.198971e-52 | -8.615850e-47 |
| Msa0604360 | Msa1464560 | 0.814590 | 1.425977e-51 | -8.615850e-47 |
| Msa0604360 | Msa1465900 | 0.811041 | 8.535436e-51 | -8.615850e-47 |
| Msa0124340 | Msa0604360 | 0.814964 | 1.178021e-51 | -8.615850e-47 |
| Msa0127820 | Msa0604360 | 0.814124 | 1.807261e-51 | -8.615850e-47 |
| Msa0128370 | Msa0604360 | 0.805489 | 1.302697e-49 | -8.615850e-47 |
| Msa0138970 | Msa0604360 | -0.806965 | 6.367637e-50 | -8.615850e-47 |
| Msa0140780 | Msa0604360 | 0.810038 | 1.405835e-50 | -8.615850e-47 |
| Msa0142470 | Msa0604360 | 0.815944 | 7.129911e-52 | -8.615850e-47 |
| Msa0143430 | Msa0604360 | 0.813828 | 2.100902e-51 | -8.615850e-47 |
| Msa0145670 | Msa0604360 | 0.813294 | 2.753249e-51 | -8.615850e-47 |
| Msa0145950 | Msa0604360 | 0.800490 | 1.406523e-48 | -8.615850e-47 |
| Msa0148780 | Msa0604360 | 0.807954 | 3.927094e-50 | -8.615850e-47 |
| Msa0156650 | Msa0604360 | -0.807948 | 3.939261e-50 | -8.615850e-47 |
| Msa0168100 | Msa0604360 | 0.833657 | 4.703589e-56 | -8.615850e-47 |
| Msa0172350 | Msa0604360 | 0.832160 | 1.107419e-55 | -8.615850e-47 |
| Msa0183830 | Msa0604360 | 0.822414 | 2.399536e-53 | -8.615850e-47 |
| Msa0188630 | Msa0604360 | 0.825417 | 4.742693e-54 | -8.615850e-47 |
| Msa0188680 | Msa0604360 | -0.802003 | 6.895676e-49 | -8.615850e-47 |
| Msa0189950 | Msa0604360 | 0.815239 | 1.023403e-51 | -8.615850e-47 |
| Msa0190830 | Msa0604360 | 0.805705 | 1.173198e-49 | -8.615850e-47 |
| Msa0191250 | Msa0604360 | 0.809997 | 1.434529e-50 | -8.615850e-47 |
| Msa0193920 | Msa0604360 | 0.802845 | 4.624390e-49 | -8.615850e-47 |
| Msa0207000 | Msa0604360 | 0.838273 | 3.170758e-57 | -8.615850e-47 |
| Msa0217400 | Msa0604360 | 0.801042 | 1.084908e-48 | -8.615850e-47 |
| Msa0222920 | Msa0604360 | 0.838740 | 2.403363e-57 | -8.615850e-47 |
| Msa0223250 | Msa0604360 | 0.806639 | 7.462269e-50 | -8.615850e-47 |
| Msa0227510 | Msa0604360 | 0.809298 | 2.027659e-50 | -8.615850e-47 |
| Msa0230550 | Msa0604360 | -0.806003 | 1.015845e-49 | -8.615850e-47 |
| Msa0233190 | Msa0604360 | 0.808415 | 3.131868e-50 | -8.615850e-47 |
| Msa0235890 | Msa0604360 | 0.805247 | 1.463790e-49 | -8.615850e-47 |
| Msa0369570 | Msa0604360 | 0.805651 | 1.204425e-49 | -8.615850e-47 |
| Msa0374070 | Msa0604360 | 0.800925 | 1.146371e-48 | -8.615850e-47 |
| Msa0392070 | Msa0604360 | 0.801527 | 8.634479e-49 | -8.615850e-47 |
| Msa0393680 | Msa0604360 | 0.854847 | 9.371428e-62 | -8.615850e-47 |
| Msa0395870 | Msa0604360 | 0.808018 | 3.806191e-50 | -8.615850e-47 |
| Msa0402330 | Msa0604360 | 0.813104 | 3.031072e-51 | -8.615850e-47 |
| Msa0414170 | Msa0604360 | 0.811032 | 8.575667e-51 | -8.615850e-47 |
| Msa0414950 | Msa0604360 | -0.833406 | 5.430957e-56 | -8.615850e-47 |
| Msa0419820 | Msa0604360 | 0.813889 | 2.036211e-51 | -8.615850e-47 |
| Msa0422910 | Msa0604360 | 0.807273 | 5.478323e-50 | -8.615850e-47 |
| Msa0423040 | Msa0604360 | 0.810107 | 1.358782e-50 | -8.615850e-47 |
| Msa0423250 | Msa0604360 | 0.802924 | 4.452406e-49 | -8.615850e-47 |
| Msa0423360 | Msa0604360 | -0.858390 | 8.515375e-63 | -8.615850e-47 |
| Msa0424920 | Msa0604360 | 0.826465 | 2.673224e-54 | -8.615850e-47 |
| Msa0425010 | Msa0604360 | 0.811684 | 6.188517e-51 | -8.615850e-47 |
| Msa0431430 | Msa0604360 | 0.807840 | 4.153309e-50 | -8.615850e-47 |
| Msa0436280 | Msa0604360 | -0.809749 | 1.622291e-50 | -8.615850e-47 |
| Msa0437710 | Msa0604360 | 0.819425 | 1.169251e-52 | -8.615850e-47 |
| Msa0469910 | Msa0604360 | -0.822554 | 2.225960e-53 | -8.615850e-47 |
| Msa0480320 | Msa0604360 | 0.830480 | 2.867485e-55 | -8.615850e-47 |
| Msa0252180 | Msa0604360 | 0.812942 | 3.288743e-51 | -8.615850e-47 |
| Msa0257250 | Msa0604360 | 0.803393 | 3.561501e-49 | -8.615850e-47 |
| Msa0259560 | Msa0604360 | 0.836441 | 9.340719e-57 | -8.615850e-47 |
| Msa0260820 | Msa0604360 | -0.829659 | 4.549107e-55 | -8.615850e-47 |
| Msa0264350 | Msa0604360 | 0.870930 | 1.005867e-66 | -8.615850e-47 |
| Msa0264570 | Msa0604360 | 0.802610 | 5.169207e-49 | -8.615850e-47 |
| Msa0265820 | Msa0604360 | 0.800946 | 1.135480e-48 | -8.615850e-47 |
| Msa0266000 | Msa0604360 | -0.801644 | 8.168416e-49 | -8.615850e-47 |
| Msa0267760 | Msa0604360 | 0.834432 | 3.007992e-56 | -8.615850e-47 |
| Msa0269360 | Msa0604360 | 0.813298 | 2.746781e-51 | -8.615850e-47 |
| Msa0270270 | Msa0604360 | 0.827552 | 1.468813e-54 | -8.615850e-47 |
| Msa0274360 | Msa0604360 | 0.803045 | 4.205136e-49 | -8.615850e-47 |
| Msa0275670 | Msa0604360 | 0.818967 | 1.487014e-52 | -8.615850e-47 |
| Msa0280900 | Msa0604360 | 0.820194 | 7.800853e-53 | -8.615850e-47 |
| Msa0282850 | Msa0604360 | 0.843551 | 1.307394e-58 | -8.615850e-47 |
| Msa0283520 | Msa0604360 | 0.807716 | 4.412927e-50 | -8.615850e-47 |
| Msa0287650 | Msa0604360 | 0.805352 | 1.391138e-49 | -8.615850e-47 |
| Msa0296760 | Msa0604360 | 0.820830 | 5.573410e-53 | -8.615850e-47 |
| Msa0302450 | Msa0604360 | 0.830835 | 2.347381e-55 | -8.615850e-47 |
| Msa0308830 | Msa0604360 | 0.821817 | 3.300271e-53 | -8.615850e-47 |
| Msa0311580 | Msa0604360 | 0.814401 | 1.570078e-51 | -8.615850e-47 |
| Msa0311860 | Msa0604360 | 0.833277 | 5.849934e-56 | -8.615850e-47 |
| Msa0314210 | Msa0604360 | 0.812963 | 3.253524e-51 | -8.615850e-47 |
| Msa0315150 | Msa0604360 | 0.804701 | 1.903854e-49 | -8.615850e-47 |
| Msa0315240 | Msa0604360 | 0.825410 | 4.758989e-54 | -8.615850e-47 |
| Msa0320100 | Msa0604360 | 0.813617 | 2.338155e-51 | -8.615850e-47 |
| Msa0333720 | Msa0604360 | -0.826170 | 3.141544e-54 | -8.615850e-47 |
| Msa0334040 | Msa0604360 | 0.800631 | 1.316349e-48 | -8.615850e-47 |
| Msa0334350 | Msa0604360 | 0.833916 | 4.051910e-56 | -8.615850e-47 |
| Msa0335040 | Msa0604360 | 0.812925 | 3.317847e-51 | -8.615850e-47 |
| Msa0342200 | Msa0604360 | 0.816166 | 6.362920e-52 | -8.615850e-47 |
| Msa0351500 | Msa0604360 | 0.801289 | 9.661369e-49 | -8.615850e-47 |
| Msa0355270 | Msa0604360 | 0.806623 | 7.519903e-50 | -8.615850e-47 |
| Msa0356890 | Msa0604360 | -0.814539 | 1.463238e-51 | -8.615850e-47 |
| Msa0505770 | Msa0604360 | 0.820540 | 6.500307e-53 | -8.615850e-47 |
| Msa0509610 | Msa0604360 | 0.817800 | 2.733268e-52 | -8.615850e-47 |
| Msa0509970 | Msa0604360 | 0.825972 | 3.502416e-54 | -8.615850e-47 |
| Msa0516320 | Msa0604360 | 0.826259 | 2.991880e-54 | -8.615850e-47 |
| Msa0521880 | Msa0604360 | 0.821111 | 4.803116e-53 | -8.615850e-47 |
| Msa0524120 | Msa0604360 | 0.815361 | 9.618464e-52 | -8.615850e-47 |
| Msa0526710 | Msa0604360 | 0.826437 | 2.714317e-54 | -8.615850e-47 |
| Msa0526890 | Msa0604360 | 0.833169 | 6.221801e-56 | -8.615850e-47 |
| Msa0532330 | Msa0604360 | 0.807582 | 4.710126e-50 | -8.615850e-47 |
| Msa0535030 | Msa0604360 | 0.814302 | 1.651294e-51 | -8.615850e-47 |
| Msa0535060 | Msa0604360 | 0.819056 | 1.419193e-52 | -8.615850e-47 |
| Msa0535450 | Msa0604360 | 0.833788 | 4.361012e-56 | -8.615850e-47 |
| Msa0538700 | Msa0604360 | 0.810269 | 1.253553e-50 | -8.615850e-47 |
| Msa0540870 | Msa0604360 | 0.838567 | 2.663992e-57 | -8.615850e-47 |
| Msa0546380 | Msa0604360 | 0.819235 | 1.292051e-52 | -8.615850e-47 |
| Msa0569020 | Msa0604360 | 0.806816 | 6.845413e-50 | -8.615850e-47 |
| Msa0574890 | Msa0604360 | 0.807951 | 3.932071e-50 | -8.615850e-47 |
| Msa0576980 | Msa0604360 | 0.809631 | 1.719989e-50 | -8.615850e-47 |
| Msa0577940 | Msa0604360 | -0.819523 | 1.110930e-52 | -8.615850e-47 |
| Msa0582110 | Msa0604360 | 0.806826 | 6.811401e-50 | -8.615850e-47 |
| Msa0591770 | Msa0604360 | 0.829895 | 3.985275e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604360 | MtrunA17_Chr4g0018891 | 98.988 | 494 | 5 | 0 | 1 | 494 | 1 | 494 | 0.0 | 999 |
| Msa0604360 | MtrunA17_Chr3g0079141 | 64.431 | 492 | 149 | 9 | 10 | 494 | 7 | 479 | 0.0 | 614 |
| Msa0604360 | MtrunA17_Chr2g0286991 | 31.948 | 385 | 235 | 17 | 82 | 447 | 11 | 387 | 7.15e-25 | 108 |
| Msa0604360 | MtrunA17_Chr2g0286991 | 27.239 | 268 | 153 | 11 | 189 | 447 | 256 | 490 | 1.02e-12 | 70.5 |
| Msa0604360 | MtrunA17_Chr4g0004901 | 27.953 | 254 | 170 | 7 | 216 | 464 | 371 | 616 | 6.29e-16 | 80.9 |
| Msa0604360 | MtrunA17_Chr4g0004901 | 23.165 | 436 | 261 | 11 | 82 | 486 | 64 | 456 | 6.29e-11 | 65.1 |
| Msa0604360 | MtrunA17_Chr1g0212071 | 27.202 | 386 | 239 | 18 | 82 | 445 | 20 | 385 | 3.49e-15 | 77.4 |
| Msa0604360 | MtrunA17_Chr1g0212071 | 30.918 | 207 | 113 | 8 | 261 | 464 | 91 | 270 | 2.59e-13 | 71.6 |
| Msa0604360 | MtrunA17_Chr1g0149351 | 23.529 | 459 | 261 | 16 | 82 | 451 | 68 | 525 | 7.88e-13 | 70.9 |
| Msa0604360 | MtrunA17_Chr7g0272131 | 22.495 | 529 | 252 | 18 | 61 | 452 | 4 | 511 | 5.00e-12 | 68.6 |
| Msa0604360 | MtrunA17_Chr4g0063841 | 24.620 | 329 | 211 | 12 | 189 | 482 | 219 | 545 | 5.61e-11 | 65.1 |
| Msa0604360 | MtrunA17_Chr1g0152951 | 24.331 | 411 | 235 | 15 | 82 | 430 | 64 | 460 | 6.35e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604360 | AT5G07670.1 | 58.717 | 499 | 178 | 8 | 1 | 494 | 1 | 476 | 0.0 | 553 |
| Msa0604360 | AT5G51380.1 | 56.133 | 481 | 204 | 3 | 14 | 493 | 4 | 478 | 0.0 | 519 |
| Msa0604360 | AT5G51370.2 | 59.506 | 405 | 163 | 1 | 90 | 494 | 40 | 443 | 4.05e-162 | 467 |
| Msa0604360 | AT5G51370.1 | 57.729 | 317 | 133 | 1 | 90 | 406 | 40 | 355 | 1.87e-117 | 350 |
| Msa0604360 | AT4G15475.1 | 28.173 | 394 | 244 | 12 | 82 | 450 | 11 | 390 | 4.22e-23 | 103 |
| Msa0604360 | AT4G15475.1 | 26.364 | 330 | 201 | 12 | 132 | 452 | 199 | 495 | 2.80e-16 | 82.0 |
| Msa0604360 | AT5G23340.1 | 25.495 | 404 | 238 | 16 | 82 | 453 | 10 | 382 | 2.33e-15 | 78.6 |
| Msa0604360 | AT2G25490.1 | 25.253 | 297 | 186 | 10 | 189 | 451 | 216 | 510 | 2.35e-13 | 72.8 |
| Msa0604360 | AT2G25490.1 | 23.929 | 280 | 182 | 11 | 189 | 450 | 348 | 614 | 2.70e-11 | 66.6 |
Find 137 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAGAAATTGGGGAAATT+AGG | 0.130048 | 4_2:-49890255 | None:intergenic |
| AGTTTCTTCAATGGCGAATT+AGG | 0.133712 | 4_2:-49890114 | None:intergenic |
| TTGATCAATGATTGAGAAAT+TGG | 0.141986 | 4_2:-49890265 | None:intergenic |
| TCCGGGACTTGATGAGTATT+TGG | 0.154013 | 4_2:+49891085 | Msa0604360:CDS |
| GCAACAACTATTTGGTTTAA+AGG | 0.182187 | 4_2:-49890183 | None:intergenic |
| TTGAATATGTATATTGATTC+TGG | 0.183844 | 4_2:+49890546 | Msa0604360:CDS |
| GGTTCGGTTGTTTCGGATAT+TGG | 0.212698 | 4_2:+49890840 | Msa0604360:CDS |
| TATCTGGTAGATTGATTTAT+AGG | 0.229578 | 4_2:+49890439 | Msa0604360:CDS |
| ACTTGAACCCTTCTCAAATT+AGG | 0.239059 | 4_2:-49890657 | None:intergenic |
| TGCTAGGGAGATTATTATTC+AGG | 0.242284 | 4_2:+49891199 | Msa0604360:CDS |
| CCTGTTGAGGTTATTGATAA+TGG | 0.245467 | 4_2:+49890609 | Msa0604360:CDS |
| GAACACGGTGGTCTGATTTA+TGG | 0.249895 | 4_2:+49890139 | Msa0604360:CDS |
| TTGCAGCAGCAACAACTATT+TGG | 0.253604 | 4_2:-49890191 | None:intergenic |
| GTAAAATTGCTTTACTTAGA+AGG | 0.276039 | 4_2:+49891990 | Msa0604360:CDS |
| TTCACATTTCTCTGTGAATC+TGG | 0.289076 | 4_2:-49890336 | None:intergenic |
| TTCTTTGAGAGTAGTAAATA+AGG | 0.290782 | 4_2:-49892135 | None:intergenic |
| CAGTTCACTATAGTGGAAAT+TGG | 0.290783 | 4_2:+49892667 | Msa0604360:three_prime_UTR |
| AATCATGTTGATTTGATTCA+TGG | 0.312777 | 4_2:+49890474 | Msa0604360:CDS |
| GGCGAATTAGGGTTAGGGTT+AGG | 0.312829 | 4_2:-49890102 | None:intergenic |
| TTTGATGGGATTAAGGCTAT+TGG | 0.316937 | 4_2:+49890930 | Msa0604360:CDS |
| AAGTCTTGTGGGGATTAGTA+TGG | 0.317529 | 4_2:+49892196 | Msa0604360:CDS |
| TGATCAATGATTGAGAAATT+GGG | 0.319273 | 4_2:-49890264 | None:intergenic |
| GCGAATTAGGGTTAGGGTTA+GGG | 0.322778 | 4_2:-49890101 | None:intergenic |
| CTGTTGAGGTTATTGATAAT+GGG | 0.336909 | 4_2:+49890610 | Msa0604360:CDS |
| AATCAACATGATTAAGATTA+GGG | 0.341888 | 4_2:-49890464 | None:intergenic |
| TTGAGAAATTGGGGAAATTA+GGG | 0.342646 | 4_2:-49890254 | None:intergenic |
| TCGGCTTTGCAACTGTTTGC+AGG | 0.351431 | 4_2:+49891249 | Msa0604360:CDS |
| CCGGGACTTGATGAGTATTT+GGG | 0.353254 | 4_2:+49891086 | Msa0604360:CDS |
| GTGTTCTACATTGCAGGAAT+TGG | 0.354359 | 4_2:+49890722 | Msa0604360:CDS |
| GTTTCTTCAATGGCGAATTA+GGG | 0.356220 | 4_2:-49890113 | None:intergenic |
| GGGTTAGTTGCTTTAGCTAA+TGG | 0.358130 | 4_2:+49890630 | Msa0604360:CDS |
| GGAAGAAGTGATTTCGTATC+TGG | 0.363751 | 4_2:-49892170 | None:intergenic |
| GATCGATTCGGATTCGTGAT+TGG | 0.364905 | 4_2:+49890406 | Msa0604360:CDS |
| ATTACGGAACAATGGTGATT+TGG | 0.365326 | 4_2:+49892380 | Msa0604360:three_prime_UTR |
| AGATTATTATTCAGGATTGC+TGG | 0.374839 | 4_2:+49891207 | Msa0604360:CDS |
| TTGGTTTAAAGGCTTTGATT+TGG | 0.375505 | 4_2:-49890172 | None:intergenic |
| CTACTCTCAAAGAATTGAAA+TGG | 0.378081 | 4_2:+49892144 | Msa0604360:CDS |
| AAATCAACATGATTAAGATT+AGG | 0.378177 | 4_2:-49890465 | None:intergenic |
| TTGTGAAGCTTGAGCTTTGT+GGG | 0.380521 | 4_2:+49890895 | Msa0604360:CDS |
| TGAAATGGGGTTGTTAAGTT+TGG | 0.381444 | 4_2:+49890692 | Msa0604360:CDS |
| TAAGAAGATTGATTTGAATC+CGG | 0.381569 | 4_2:+49891067 | Msa0604360:CDS |
| ACAGAGAAATGTGAATTCAT+TGG | 0.382696 | 4_2:+49890344 | Msa0604360:CDS |
| TTCAATGGCGAATTAGGGTT+AGG | 0.387616 | 4_2:-49890108 | None:intergenic |
| ATTCTGGGTCGACGCCGAAT+TGG | 0.388133 | 4_2:+49890562 | Msa0604360:CDS |
| CTAATCCCCACAAGACTTGA+TGG | 0.388509 | 4_2:-49892191 | None:intergenic |
| TTGAGAAGGGTTCAAGTGAT+TGG | 0.391585 | 4_2:+49890663 | Msa0604360:CDS |
| TTGATGGGATTAAGGCTATT+GGG | 0.396993 | 4_2:+49890931 | Msa0604360:CDS |
| TTTCTGTTTGCAGGGTTGCT+AGG | 0.398905 | 4_2:+49891183 | Msa0604360:CDS |
| GTGTAGTGATAATGTGTTAA+GGG | 0.403587 | 4_2:+49890755 | Msa0604360:CDS |
| TGAAGAGTGTTCTACATTGC+AGG | 0.404045 | 4_2:+49890716 | Msa0604360:CDS |
| CAATTTCCACTATAGTGAAC+TGG | 0.407011 | 4_2:-49892666 | None:intergenic |
| TTTGCAAAAGTGTCAGTTGC+GGG | 0.408350 | 4_2:+49891136 | Msa0604360:CDS |
| TGAATATGTATATTGATTCT+GGG | 0.409312 | 4_2:+49890547 | Msa0604360:CDS |
| GATTGCTGGGGATTCGATAA+TGG | 0.409744 | 4_2:+49891221 | Msa0604360:CDS |
| TTCTGTTTGCAGGGTTGCTA+GGG | 0.414617 | 4_2:+49891184 | Msa0604360:CDS |
| GAATTTCATCAGATAACATA+AGG | 0.419470 | 4_2:-49890290 | None:intergenic |
| GTTGAATTTACAAGGTCGTT+TGG | 0.420107 | 4_2:+49890380 | Msa0604360:CDS |
| CTTGTGAAGCTTGAGCTTTG+TGG | 0.422001 | 4_2:+49890894 | Msa0604360:CDS |
| ACTGCTAACAACTGAAGGTT+TGG | 0.429789 | 4_2:+49892019 | Msa0604360:CDS |
| CTTCTTCCATCAAGTCTTGT+GGG | 0.431093 | 4_2:+49892185 | Msa0604360:CDS |
| CGTGTTCCTAGTTTCTTCAA+TGG | 0.432750 | 4_2:-49890123 | None:intergenic |
| TCCTCACAATTAAACCAATT+CGG | 0.433785 | 4_2:-49890576 | None:intergenic |
| GTCGTTTGGTTCGATCGATT+CGG | 0.438610 | 4_2:+49890394 | Msa0604360:CDS |
| AGTGTAGTGATAATGTGTTA+AGG | 0.449338 | 4_2:+49890754 | Msa0604360:CDS |
| GTGATTGGTGCTAGTGAAAT+GGG | 0.450657 | 4_2:+49890678 | Msa0604360:CDS |
| GGATTCGATAATGGCATGTT+CGG | 0.451374 | 4_2:+49891230 | Msa0604360:CDS |
| CCATTATCAATAACCTCAAC+AGG | 0.455104 | 4_2:-49890609 | None:intergenic |
| AAGAAGATTGATTTGAATCC+GGG | 0.456191 | 4_2:+49891068 | Msa0604360:CDS |
| TGGAGTCTGTAATACATTCA+TGG | 0.461431 | 4_2:+49892039 | Msa0604360:CDS |
| GATCAATGATTGAGAAATTG+GGG | 0.464246 | 4_2:-49890263 | None:intergenic |
| GATTATTATTCAGGATTGCT+GGG | 0.464395 | 4_2:+49891208 | Msa0604360:CDS |
| CTACGCCCAGTTCACTATAG+TGG | 0.464517 | 4_2:+49892660 | Msa0604360:three_prime_UTR |
| GCGGGATAAGAAGAGCGTTT+CGG | 0.467821 | 4_2:+49891154 | Msa0604360:CDS |
| ACCTTTAGCTTAGATGTTGG+CGG | 0.468048 | 4_2:+49892561 | Msa0604360:three_prime_UTR |
| AGTGATTGGTGCTAGTGAAA+TGG | 0.469678 | 4_2:+49890677 | Msa0604360:CDS |
| GTAAATAAGGTTGCAAGTGA+AGG | 0.475213 | 4_2:-49892122 | None:intergenic |
| CTATAGCGTTGTAATGTAGT+AGG | 0.480672 | 4_2:-49892312 | None:intergenic |
| GCTTACATGAGACTACTCTA+AGG | 0.483154 | 4_2:-49892076 | None:intergenic |
| TTAGCAAGTTCAAGAGCTAC+AGG | 0.484136 | 4_2:-49892764 | None:intergenic |
| AGTTCACTATAGTGGAAATT+GGG | 0.484532 | 4_2:+49892668 | Msa0604360:three_prime_UTR |
| TTCCTTATTAGTCTGACAAA+AGG | 0.488534 | 4_2:-49892609 | None:intergenic |
| ATCATGTTGATTTGATTCAT+GGG | 0.489312 | 4_2:+49890475 | Msa0604360:CDS |
| AACCATGTTACCGTTGTCTG+TGG | 0.490146 | 4_2:+49892740 | Msa0604360:three_prime_UTR |
| TCAATGGCGAATTAGGGTTA+GGG | 0.492554 | 4_2:-49890107 | None:intergenic |
| ATTCATTGGTTTGTAAAAGA+TGG | 0.495844 | 4_2:+49890358 | Msa0604360:CDS |
| ATATGGCTCATGCTACTAAC+CGG | 0.496861 | 4_2:+49892811 | Msa0604360:three_prime_UTR |
| AAAAGATGGTTGAATTTACA+AGG | 0.506141 | 4_2:+49890372 | Msa0604360:CDS |
| GGAGAATATGCTTCCTGTTG+AGG | 0.516115 | 4_2:+49890596 | Msa0604360:CDS |
| TTCTTCCATCAAGTCTTGTG+GGG | 0.518577 | 4_2:+49892186 | Msa0604360:CDS |
| AAATTGGTTGGGAATGTTGA+GGG | 0.518791 | 4_2:+49890810 | Msa0604360:CDS |
| GCCGAATTGGTTTAATTGTG+AGG | 0.522553 | 4_2:+49890575 | Msa0604360:CDS |
| TTTACCTTTAGCTTAGATGT+TGG | 0.523268 | 4_2:+49892558 | Msa0604360:three_prime_UTR |
| ACTTCTTCCATCAAGTCTTG+TGG | 0.526263 | 4_2:+49892184 | Msa0604360:CDS |
| AATTTCATCAGATAACATAA+GGG | 0.529077 | 4_2:-49890289 | None:intergenic |
| CTTGAGCTTTGTGGGTGTGA+AGG | 0.531367 | 4_2:+49890903 | Msa0604360:CDS |
| CCCAAATACTCATCAAGTCC+CGG | 0.535072 | 4_2:-49891086 | None:intergenic |
| ATGGTTGTCCTAATTTGAGA+AGG | 0.537606 | 4_2:+49890649 | Msa0604360:CDS |
| ACCGCCAACATCTAAGCTAA+AGG | 0.537822 | 4_2:-49892562 | None:intergenic |
| TTGTCTAATAGCAACTATAG+TGG | 0.541113 | 4_2:-49892434 | None:intergenic |
| TGGGAAGTGTTGTCAGATGT+TGG | 0.541636 | 4_2:+49890950 | Msa0604360:CDS |
| TGTAGTGATAATGTGTTAAG+GGG | 0.549508 | 4_2:+49890756 | Msa0604360:CDS |
| TTGAGCTTTGTGGGTGTGAA+GGG | 0.551393 | 4_2:+49890904 | Msa0604360:CDS |
| AAATGCAGCCTCTCAAGTGC+AGG | 0.555404 | 4_2:-49891116 | None:intergenic |
| GTTCTTGTCCTGCACTTGAG+AGG | 0.559400 | 4_2:+49891108 | Msa0604360:CDS |
| GGGATTAGTATGGGAAAGAA+AGG | 0.559970 | 4_2:+49892206 | Msa0604360:CDS |
| AGTCTTGTGGGGATTAGTAT+GGG | 0.562954 | 4_2:+49892197 | Msa0604360:CDS |
| ATCATAGAATGGATGATGGA+TGG | 0.571302 | 4_2:+49890991 | Msa0604360:CDS |
| GACATTGTGTGATCATAGAA+TGG | 0.573800 | 4_2:+49890980 | Msa0604360:CDS |
| TGGTTGTCCTAATTTGAGAA+GGG | 0.574459 | 4_2:+49890650 | Msa0604360:CDS |
| TGCTCACTGCTAACAACTGA+AGG | 0.578301 | 4_2:+49892014 | Msa0604360:CDS |
| GTGAGAATTTGAAGACGTTG+AGG | 0.581735 | 4_2:+49891033 | Msa0604360:CDS |
| AATTCGCCATTGAAGAAACT+AGG | 0.585056 | 4_2:+49890117 | Msa0604360:CDS |
| TGTGATCATAGAATGGATGA+TGG | 0.591492 | 4_2:+49890987 | Msa0604360:CDS |
| GTCTGTAATACATTCATGGA+AGG | 0.593439 | 4_2:+49892043 | Msa0604360:CDS |
| ACCATGTTACCGTTGTCTGT+GGG | 0.595317 | 4_2:+49892741 | Msa0604360:three_prime_UTR |
| GCCCACAGACAACGGTAACA+TGG | 0.600946 | 4_2:-49892742 | None:intergenic |
| TTTAGCTTAGATGTTGGCGG+TGG | 0.604261 | 4_2:+49892564 | Msa0604360:three_prime_UTR |
| GAAATTGGTTGGGAATGTTG+AGG | 0.606598 | 4_2:+49890809 | Msa0604360:CDS |
| AGCTACAGGCCCACAGACAA+CGG | 0.611946 | 4_2:-49892750 | None:intergenic |
| TAGAATGGATGATGGATGGA+TGG | 0.612140 | 4_2:+49890995 | Msa0604360:CDS |
| ATTAGTATGGGAAAGAAAGG+TGG | 0.613088 | 4_2:+49892209 | Msa0604360:CDS |
| CTCTCAAAGAATTGAAATGG+AGG | 0.618145 | 4_2:+49892147 | Msa0604360:CDS |
| ATTTGCAAAAGTGTCAGTTG+CGG | 0.627786 | 4_2:+49891135 | Msa0604360:CDS |
| AATTTCCACTATAGTGAACT+GGG | 0.630085 | 4_2:-49892665 | None:intergenic |
| GTATAAAGAAAATGCAACAA+GGG | 0.630114 | 4_2:-49892693 | None:intergenic |
| TATAAAGAAAATGCAACAAG+GGG | 0.630964 | 4_2:-49892692 | None:intergenic |
| TGTATAAAGAAAATGCAACA+AGG | 0.637047 | 4_2:-49892694 | None:intergenic |
| ATTATTATTCAGGATTGCTG+GGG | 0.650156 | 4_2:+49891209 | Msa0604360:CDS |
| GTAGTGATAATGTGTTAAGG+GGG | 0.652549 | 4_2:+49890757 | Msa0604360:CDS |
| GGATGATGGATGGATGGCTG+CGG | 0.655457 | 4_2:+49891001 | Msa0604360:CDS |
| CATTGAAGAAACTAGGAACA+CGG | 0.661833 | 4_2:+49890124 | Msa0604360:CDS |
| GAAGTGTTGTCAGATGTTGG+AGG | 0.680445 | 4_2:+49890953 | Msa0604360:CDS |
| AATAGCGTATTACGGAACAA+TGG | 0.697660 | 4_2:+49892372 | Msa0604360:three_prime_UTR |
| ACTATAACGCTATATCATAG+CGG | 0.739086 | 4_2:-49892410 | None:intergenic |
| TGATTGGTGCTAGTGAAATG+GGG | 0.753807 | 4_2:+49890679 | Msa0604360:CDS |
| TAGTTGCTATTAGACAACAA+TGG | 0.761255 | 4_2:+49892440 | Msa0604360:three_prime_UTR |
| TGAAGAAACTAGGAACACGG+TGG | 0.807458 | 4_2:+49890127 | Msa0604360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATTATATTGTGTAAT+TGG | + | chr4_2:49891573-49891592 | Msa0604360:intron | 15.0% |
| !! | TAAAAAAGTGATTATTACAT+TGG | - | chr4_2:49892542-49892561 | None:intergenic | 15.0% |
| !!! | ACTTTTGTATAAAATGTATA+TGG | + | chr4_2:49892794-49892813 | Msa0604360:three_prime_UTR | 15.0% |
| !! | AATTTCATCAGATAACATAA+GGG | - | chr4_2:49890292-49890311 | None:intergenic | 20.0% |
| !! | AATCAACATGATTAAGATTA+GGG | - | chr4_2:49890467-49890486 | None:intergenic | 20.0% |
| !! | AAATCAACATGATTAAGATT+AGG | - | chr4_2:49890468-49890487 | None:intergenic | 20.0% |
| !!! | TTGAATATGTATATTGATTC+TGG | + | chr4_2:49890546-49890565 | Msa0604360:CDS | 20.0% |
| !!! | TGAATATGTATATTGATTCT+GGG | + | chr4_2:49890547-49890566 | Msa0604360:CDS | 20.0% |
| !! | CTCTAATCATATATGTATAT+TGG | + | chr4_2:49891612-49891631 | Msa0604360:intron | 20.0% |
| !!! | AGTAATTTTTTCTTTCAGTA+TGG | + | chr4_2:49891668-49891687 | Msa0604360:intron | 20.0% |
| !!! | TCCAATTTCTATATGTTTTT+TGG | + | chr4_2:49891853-49891872 | Msa0604360:intron | 20.0% |
| !!! | CCAATTTCTATATGTTTTTT+GGG | + | chr4_2:49891854-49891873 | Msa0604360:intron | 20.0% |
| !!! | TTTTACTAAATAGCGTATTA+CGG | + | chr4_2:49892364-49892383 | Msa0604360:three_prime_UTR | 20.0% |
| !!! | TTTTACATAATTACATTGCT+AGG | - | chr4_2:49892639-49892658 | None:intergenic | 20.0% |
| ! | TGATCAATGATTGAGAAATT+GGG | - | chr4_2:49890267-49890286 | None:intergenic | 25.0% |
| ! | TTGATCAATGATTGAGAAAT+TGG | - | chr4_2:49890268-49890287 | None:intergenic | 25.0% |
| ! | GAATTTCATCAGATAACATA+AGG | - | chr4_2:49890293-49890312 | None:intergenic | 25.0% |
| !!! | ATTCATTGGTTTGTAAAAGA+TGG | + | chr4_2:49890358-49890377 | Msa0604360:CDS | 25.0% |
| ! | AAAAGATGGTTGAATTTACA+AGG | + | chr4_2:49890372-49890391 | Msa0604360:CDS | 25.0% |
| !! | TATCTGGTAGATTGATTTAT+AGG | + | chr4_2:49890439-49890458 | Msa0604360:CDS | 25.0% |
| !!! | AATCATGTTGATTTGATTCA+TGG | + | chr4_2:49890474-49890493 | Msa0604360:CDS | 25.0% |
| !!! | ATCATGTTGATTTGATTCAT+GGG | + | chr4_2:49890475-49890494 | Msa0604360:CDS | 25.0% |
| !!! | GAATTTGCAGATTTTGAAAT+TGG | + | chr4_2:49890794-49890813 | Msa0604360:CDS | 25.0% |
| !!! | TAAGAAGATTGATTTGAATC+CGG | + | chr4_2:49891067-49891086 | Msa0604360:CDS | 25.0% |
| !!! | TCATATTTTAACTTACCTCT+CGG | + | chr4_2:49891494-49891513 | Msa0604360:intron | 25.0% |
| !! | CATAACACAAATTAGTTTAG+AGG | + | chr4_2:49891517-49891536 | Msa0604360:intron | 25.0% |
| ! | ATTAGAGACATTTCAACATT+TGG | - | chr4_2:49891599-49891618 | None:intergenic | 25.0% |
| ! | ATATATGTATATTGGCAATC+TGG | + | chr4_2:49891620-49891639 | Msa0604360:intron | 25.0% |
| ! | CCCAAAAAACATATAGAAAT+TGG | - | chr4_2:49891857-49891876 | None:intergenic | 25.0% |
| ! | GTAAAATTGCTTTACTTAGA+AGG | + | chr4_2:49891990-49892009 | Msa0604360:CDS | 25.0% |
| !! | TTCTTTGAGAGTAGTAAATA+AGG | - | chr4_2:49892138-49892157 | None:intergenic | 25.0% |
| !!! | AAGGTGGCAAATTTTTTAAA+CGG | + | chr4_2:49892225-49892244 | Msa0604360:CDS | 25.0% |
| ! | ATAGTTGATCACAAAAATAG+CGG | + | chr4_2:49892278-49892297 | Msa0604360:three_prime_UTR | 25.0% |
| !!! | TAGTAAAAAGTGTTGTCAAA+TGG | - | chr4_2:49892352-49892371 | None:intergenic | 25.0% |
| !! | AGTAGTTTTCTAATAAACCT+AGG | + | chr4_2:49892464-49892483 | Msa0604360:three_prime_UTR | 25.0% |
| ! | TATAAAGAAAATGCAACAAG+GGG | - | chr4_2:49892695-49892714 | None:intergenic | 25.0% |
| ! | GTATAAAGAAAATGCAACAA+GGG | - | chr4_2:49892696-49892715 | None:intergenic | 25.0% |
| ! | TGTATAAAGAAAATGCAACA+AGG | - | chr4_2:49892697-49892716 | None:intergenic | 25.0% |
| !!! | TCGTTTTTGTGTTGTTTTTG+CGG | - | chr4_2:49890035-49890054 | None:intergenic | 30.0% |
| !!! | AAAAACGATGTCGTTTTCAA+CGG | + | chr4_2:49890047-49890066 | Msa0604360:exon | 30.0% |
| ! | TTGGTTTAAAGGCTTTGATT+TGG | - | chr4_2:49890175-49890194 | None:intergenic | 30.0% |
| ! | GCAACAACTATTTGGTTTAA+AGG | - | chr4_2:49890186-49890205 | None:intergenic | 30.0% |
| !! | AAATTAGGGTTTGATTTTCG+AGG | - | chr4_2:49890243-49890262 | None:intergenic | 30.0% |
| TTGAGAAATTGGGGAAATTA+GGG | - | chr4_2:49890257-49890276 | None:intergenic | 30.0% | |
| ATTGAGAAATTGGGGAAATT+AGG | - | chr4_2:49890258-49890277 | None:intergenic | 30.0% | |
| GATCAATGATTGAGAAATTG+GGG | - | chr4_2:49890266-49890285 | None:intergenic | 30.0% | |
| ACAGAGAAATGTGAATTCAT+TGG | + | chr4_2:49890344-49890363 | Msa0604360:CDS | 30.0% | |
| !!! | GATTGGAACTTTGTTTTATC+TGG | + | chr4_2:49890423-49890442 | Msa0604360:CDS | 30.0% |
| TCCTCACAATTAAACCAATT+CGG | - | chr4_2:49890579-49890598 | None:intergenic | 30.0% | |
| ! | CTGTTGAGGTTATTGATAAT+GGG | + | chr4_2:49890610-49890629 | Msa0604360:CDS | 30.0% |
| ! | AGTGTAGTGATAATGTGTTA+AGG | + | chr4_2:49890754-49890773 | Msa0604360:CDS | 30.0% |
| ! | GTGTAGTGATAATGTGTTAA+GGG | + | chr4_2:49890755-49890774 | Msa0604360:CDS | 30.0% |
| ! | TGTAGTGATAATGTGTTAAG+GGG | + | chr4_2:49890756-49890775 | Msa0604360:CDS | 30.0% |
| !!! | TTGCAGATTTTGAAATTGGT+TGG | + | chr4_2:49890798-49890817 | Msa0604360:CDS | 30.0% |
| !!! | TGCAGATTTTGAAATTGGTT+GGG | + | chr4_2:49890799-49890818 | Msa0604360:CDS | 30.0% |
| !!! | ATTTTATGGTTCGGTTGTTT+CGG | + | chr4_2:49890833-49890852 | Msa0604360:CDS | 30.0% |
| !! | AAGAAGATTGATTTGAATCC+GGG | + | chr4_2:49891068-49891087 | Msa0604360:CDS | 30.0% |
| AGATTATTATTCAGGATTGC+TGG | + | chr4_2:49891207-49891226 | Msa0604360:CDS | 30.0% | |
| GATTATTATTCAGGATTGCT+GGG | + | chr4_2:49891208-49891227 | Msa0604360:CDS | 30.0% | |
| ATTATTATTCAGGATTGCTG+GGG | + | chr4_2:49891209-49891228 | Msa0604360:CDS | 30.0% | |
| ! | ACTATACTGTCTAGAACTTA+TGG | + | chr4_2:49891312-49891331 | Msa0604360:intron | 30.0% |
| TTTCCTGTTTGATTGACAAT+TGG | + | chr4_2:49891341-49891360 | Msa0604360:intron | 30.0% | |
| TTACCAATTGTCAATCAAAC+AGG | - | chr4_2:49891347-49891366 | None:intergenic | 30.0% | |
| AACAAAGTTATTGCTTCAGA+TGG | - | chr4_2:49891433-49891452 | None:intergenic | 30.0% | |
| ! | TCTGAAGCAATAACTTTGTT+TGG | + | chr4_2:49891433-49891452 | Msa0604360:intron | 30.0% |
| ACCTCTAACTTAAGACTTAA+GGG | + | chr4_2:49891738-49891757 | Msa0604360:intron | 30.0% | |
| GCAATATTGGAATAAGGAAA+AGG | - | chr4_2:49891787-49891806 | None:intergenic | 30.0% | |
| CTTGTTGCAATATTGGAATA+AGG | - | chr4_2:49891793-49891812 | None:intergenic | 30.0% | |
| !! | CTATCAACTTGTTGCAATAT+TGG | - | chr4_2:49891800-49891819 | None:intergenic | 30.0% |
| !!! | ATGGTTTTGTCGACTAAAAT+TGG | - | chr4_2:49891901-49891920 | None:intergenic | 30.0% |
| TGATTAGAGTCACTTCTATA+TGG | - | chr4_2:49891920-49891939 | None:intergenic | 30.0% | |
| ! | ATCAATTGCTGTTCTATTTC+AGG | + | chr4_2:49891964-49891983 | Msa0604360:intron | 30.0% |
| CTACTCTCAAAGAATTGAAA+TGG | + | chr4_2:49892144-49892163 | Msa0604360:CDS | 30.0% | |
| ACTATAACGCTATATCATAG+CGG | - | chr4_2:49892413-49892432 | None:intergenic | 30.0% | |
| TTGTCTAATAGCAACTATAG+TGG | - | chr4_2:49892437-49892456 | None:intergenic | 30.0% | |
| ! | TAGTTGCTATTAGACAACAA+TGG | + | chr4_2:49892440-49892459 | Msa0604360:three_prime_UTR | 30.0% |
| ! | ACAGATTATTTTCACTGACA+TGG | + | chr4_2:49892500-49892519 | Msa0604360:three_prime_UTR | 30.0% |
| ! | TTTACCTTTAGCTTAGATGT+TGG | + | chr4_2:49892558-49892577 | Msa0604360:three_prime_UTR | 30.0% |
| ! | TTCCTTTTGTCAGACTAATA+AGG | + | chr4_2:49892607-49892626 | Msa0604360:three_prime_UTR | 30.0% |
| ! | TTCCTTATTAGTCTGACAAA+AGG | - | chr4_2:49892612-49892631 | None:intergenic | 30.0% |
| AATTTCCACTATAGTGAACT+GGG | - | chr4_2:49892668-49892687 | None:intergenic | 30.0% | |
| ! | AGTTCACTATAGTGGAAATT+GGG | + | chr4_2:49892668-49892687 | Msa0604360:three_prime_UTR | 30.0% |
| !!! | TTTTTGTGTTGTTTTTGCGG+TGG | - | chr4_2:49890032-49890051 | None:intergenic | 35.0% |
| GTTTCTTCAATGGCGAATTA+GGG | - | chr4_2:49890116-49890135 | None:intergenic | 35.0% | |
| AGTTTCTTCAATGGCGAATT+AGG | - | chr4_2:49890117-49890136 | None:intergenic | 35.0% | |
| AATTCGCCATTGAAGAAACT+AGG | + | chr4_2:49890117-49890136 | Msa0604360:CDS | 35.0% | |
| CATTGAAGAAACTAGGAACA+CGG | + | chr4_2:49890124-49890143 | Msa0604360:CDS | 35.0% | |
| TTCACATTTCTCTGTGAATC+TGG | - | chr4_2:49890339-49890358 | None:intergenic | 35.0% | |
| GTTGAATTTACAAGGTCGTT+TGG | + | chr4_2:49890380-49890399 | Msa0604360:CDS | 35.0% | |
| CCATTATCAATAACCTCAAC+AGG | - | chr4_2:49890612-49890631 | None:intergenic | 35.0% | |
| CCTGTTGAGGTTATTGATAA+TGG | + | chr4_2:49890609-49890628 | Msa0604360:CDS | 35.0% | |
| ATGGTTGTCCTAATTTGAGA+AGG | + | chr4_2:49890649-49890668 | Msa0604360:CDS | 35.0% | |
| TGGTTGTCCTAATTTGAGAA+GGG | + | chr4_2:49890650-49890669 | Msa0604360:CDS | 35.0% | |
| ACTTGAACCCTTCTCAAATT+AGG | - | chr4_2:49890660-49890679 | None:intergenic | 35.0% | |
| TGAAATGGGGTTGTTAAGTT+TGG | + | chr4_2:49890692-49890711 | Msa0604360:CDS | 35.0% | |
| ! | GTAGTGATAATGTGTTAAGG+GGG | + | chr4_2:49890757-49890776 | Msa0604360:CDS | 35.0% |
| AAATTGGTTGGGAATGTTGA+GGG | + | chr4_2:49890810-49890829 | Msa0604360:CDS | 35.0% | |
| ! | TGTTGAGGGATTTTATGGTT+CGG | + | chr4_2:49890824-49890843 | Msa0604360:CDS | 35.0% |
| !!! | GTTTGACGATTTTAGCTCAA+GGG | + | chr4_2:49890862-49890881 | Msa0604360:CDS | 35.0% |
| TTTGATGGGATTAAGGCTAT+TGG | + | chr4_2:49890930-49890949 | Msa0604360:CDS | 35.0% | |
| TTGATGGGATTAAGGCTATT+GGG | + | chr4_2:49890931-49890950 | Msa0604360:CDS | 35.0% | |
| GACATTGTGTGATCATAGAA+TGG | + | chr4_2:49890980-49890999 | Msa0604360:CDS | 35.0% | |
| TGTGATCATAGAATGGATGA+TGG | + | chr4_2:49890987-49891006 | Msa0604360:CDS | 35.0% | |
| !! | ATCATAGAATGGATGATGGA+TGG | + | chr4_2:49890991-49891010 | Msa0604360:CDS | 35.0% |
| !! | ATTTGCAAAAGTGTCAGTTG+CGG | + | chr4_2:49891135-49891154 | Msa0604360:CDS | 35.0% |
| TGCTAGGGAGATTATTATTC+AGG | + | chr4_2:49891199-49891218 | Msa0604360:CDS | 35.0% | |
| ATGTATATTGGCAATCTGGT+CGG | + | chr4_2:49891624-49891643 | Msa0604360:intron | 35.0% | |
| TTCTTTCAGTATGGTTCGAA+CGG | + | chr4_2:49891677-49891696 | Msa0604360:intron | 35.0% | |
| CACCTCTAACTTAAGACTTA+AGG | + | chr4_2:49891737-49891756 | Msa0604360:intron | 35.0% | |
| ACCCTTAAGTCTTAAGTTAG+AGG | - | chr4_2:49891742-49891761 | None:intergenic | 35.0% | |
| !!! | TTTTGGGTCTTGTTTGAAGT+TGG | + | chr4_2:49891870-49891889 | Msa0604360:intron | 35.0% |
| TGGAGTCTGTAATACATTCA+TGG | + | chr4_2:49892039-49892058 | Msa0604360:CDS | 35.0% | |
| GTCTGTAATACATTCATGGA+AGG | + | chr4_2:49892043-49892062 | Msa0604360:CDS | 35.0% | |
| GTAAATAAGGTTGCAAGTGA+AGG | - | chr4_2:49892125-49892144 | None:intergenic | 35.0% | |
| CTCTCAAAGAATTGAAATGG+AGG | + | chr4_2:49892147-49892166 | Msa0604360:CDS | 35.0% | |
| ATTAGTATGGGAAAGAAAGG+TGG | + | chr4_2:49892209-49892228 | Msa0604360:CDS | 35.0% | |
| CTATAGCGTTGTAATGTAGT+AGG | - | chr4_2:49892315-49892334 | None:intergenic | 35.0% | |
| TTGTCAAATGGCAACTATAG+CGG | - | chr4_2:49892340-49892359 | None:intergenic | 35.0% | |
| AATAGCGTATTACGGAACAA+TGG | + | chr4_2:49892372-49892391 | Msa0604360:three_prime_UTR | 35.0% | |
| ATTACGGAACAATGGTGATT+TGG | + | chr4_2:49892380-49892399 | Msa0604360:three_prime_UTR | 35.0% | |
| CAATTTCCACTATAGTGAAC+TGG | - | chr4_2:49892669-49892688 | None:intergenic | 35.0% | |
| ! | CAGTTCACTATAGTGGAAAT+TGG | + | chr4_2:49892667-49892686 | Msa0604360:three_prime_UTR | 35.0% |
| TCAATGGCGAATTAGGGTTA+GGG | - | chr4_2:49890110-49890129 | None:intergenic | 40.0% | |
| TTCAATGGCGAATTAGGGTT+AGG | - | chr4_2:49890111-49890130 | None:intergenic | 40.0% | |
| CGTGTTCCTAGTTTCTTCAA+TGG | - | chr4_2:49890126-49890145 | None:intergenic | 40.0% | |
| TTGCAGCAGCAACAACTATT+TGG | - | chr4_2:49890194-49890213 | None:intergenic | 40.0% | |
| ! | GCCGAATTGGTTTAATTGTG+AGG | + | chr4_2:49890575-49890594 | Msa0604360:CDS | 40.0% |
| !! | GGGTTAGTTGCTTTAGCTAA+TGG | + | chr4_2:49890630-49890649 | Msa0604360:CDS | 40.0% |
| TTGAGAAGGGTTCAAGTGAT+TGG | + | chr4_2:49890663-49890682 | Msa0604360:CDS | 40.0% | |
| !! | AGTGATTGGTGCTAGTGAAA+TGG | + | chr4_2:49890677-49890696 | Msa0604360:CDS | 40.0% |
| !! | GTGATTGGTGCTAGTGAAAT+GGG | + | chr4_2:49890678-49890697 | Msa0604360:CDS | 40.0% |
| !! | TGATTGGTGCTAGTGAAATG+GGG | + | chr4_2:49890679-49890698 | Msa0604360:CDS | 40.0% |
| !! | TGAAGAGTGTTCTACATTGC+AGG | + | chr4_2:49890716-49890735 | Msa0604360:CDS | 40.0% |
| GTGTTCTACATTGCAGGAAT+TGG | + | chr4_2:49890722-49890741 | Msa0604360:CDS | 40.0% | |
| TAATGTGTTAAGGGGGATTG+CGG | + | chr4_2:49890764-49890783 | Msa0604360:CDS | 40.0% | |
| GAAATTGGTTGGGAATGTTG+AGG | + | chr4_2:49890809-49890828 | Msa0604360:CDS | 40.0% | |
| ! | GGGAATGTTGAGGGATTTTA+TGG | + | chr4_2:49890819-49890838 | Msa0604360:CDS | 40.0% |
| !!! | GGTTTGACGATTTTAGCTCA+AGG | + | chr4_2:49890861-49890880 | Msa0604360:CDS | 40.0% |
| !!! | TTTTAGCTCAAGGGTGTAAG+AGG | + | chr4_2:49890871-49890890 | Msa0604360:CDS | 40.0% |
| ! | TTGTGAAGCTTGAGCTTTGT+GGG | + | chr4_2:49890895-49890914 | Msa0604360:CDS | 40.0% |
| !! | AGGGAGTTTTGATGGGATTA+AGG | + | chr4_2:49890923-49890942 | Msa0604360:CDS | 40.0% |
| !! | TAGAATGGATGATGGATGGA+TGG | + | chr4_2:49890995-49891014 | Msa0604360:CDS | 40.0% |
| GTGAGAATTTGAAGACGTTG+AGG | + | chr4_2:49891033-49891052 | Msa0604360:CDS | 40.0% | |
| !! | TTTGCAAAAGTGTCAGTTGC+GGG | + | chr4_2:49891136-49891155 | Msa0604360:CDS | 40.0% |
| !!! | GGCTTTGTTTTCTGTTTGCA+GGG | + | chr4_2:49891175-49891194 | Msa0604360:CDS | 40.0% |
| ! | GGATTCGATAATGGCATGTT+CGG | + | chr4_2:49891230-49891249 | Msa0604360:CDS | 40.0% |
| CACATCATGGTTACACACAT+TGG | - | chr4_2:49891386-49891405 | None:intergenic | 40.0% | |
| AACTAACGCTCAACACATCA+TGG | - | chr4_2:49891399-49891418 | None:intergenic | 40.0% | |
| CACAAATTAGTCCATCACCA+GGG | - | chr4_2:49891473-49891492 | None:intergenic | 40.0% | |
| ! | CTAATTTGTGTTATGCCGAG+AGG | - | chr4_2:49891512-49891531 | None:intergenic | 40.0% |
| ATTCAACACACAGTATCCCA+GGG | - | chr4_2:49891550-49891569 | None:intergenic | 40.0% | |
| AATTCAACACACAGTATCCC+AGG | - | chr4_2:49891551-49891570 | None:intergenic | 40.0% | |
| TGTATATTGGCAATCTGGTC+GGG | + | chr4_2:49891625-49891644 | Msa0604360:intron | 40.0% | |
| ! | TAAGGGTGTAGACTAGAACT+AGG | + | chr4_2:49891755-49891774 | Msa0604360:intron | 40.0% |
| ACTGCTAACAACTGAAGGTT+TGG | + | chr4_2:49892019-49892038 | Msa0604360:CDS | 40.0% | |
| GCTTACATGAGACTACTCTA+AGG | - | chr4_2:49892079-49892098 | None:intergenic | 40.0% | |
| GGAAGAAGTGATTTCGTATC+TGG | - | chr4_2:49892173-49892192 | None:intergenic | 40.0% | |
| ACTTCTTCCATCAAGTCTTG+TGG | + | chr4_2:49892184-49892203 | Msa0604360:CDS | 40.0% | |
| ! | CTTCTTCCATCAAGTCTTGT+GGG | + | chr4_2:49892185-49892204 | Msa0604360:CDS | 40.0% |
| ! | TTCTTCCATCAAGTCTTGTG+GGG | + | chr4_2:49892186-49892205 | Msa0604360:CDS | 40.0% |
| ! | AAGTCTTGTGGGGATTAGTA+TGG | + | chr4_2:49892196-49892215 | Msa0604360:CDS | 40.0% |
| ! | AGTCTTGTGGGGATTAGTAT+GGG | + | chr4_2:49892197-49892216 | Msa0604360:CDS | 40.0% |
| ! | GGGATTAGTATGGGAAAGAA+AGG | + | chr4_2:49892206-49892225 | Msa0604360:CDS | 40.0% |
| !! | CTGTTTTTCAGACAATGCCT+AGG | - | chr4_2:49892484-49892503 | None:intergenic | 40.0% |
| ! | ACCTTTAGCTTAGATGTTGG+CGG | + | chr4_2:49892561-49892580 | Msa0604360:three_prime_UTR | 40.0% |
| TTAGCAAGTTCAAGAGCTAC+AGG | - | chr4_2:49892767-49892786 | None:intergenic | 40.0% | |
| !!! | TTGTGTTGTTTTTGCGGTGG+TGG | - | chr4_2:49890029-49890048 | None:intergenic | 45.0% |
| GCGAATTAGGGTTAGGGTTA+GGG | - | chr4_2:49890104-49890123 | None:intergenic | 45.0% | |
| TGAAGAAACTAGGAACACGG+TGG | + | chr4_2:49890127-49890146 | Msa0604360:CDS | 45.0% | |
| GAACACGGTGGTCTGATTTA+TGG | + | chr4_2:49890139-49890158 | Msa0604360:CDS | 45.0% | |
| ! | GTCGTTTGGTTCGATCGATT+CGG | + | chr4_2:49890394-49890413 | Msa0604360:CDS | 45.0% |
| !! | GATCGATTCGGATTCGTGAT+TGG | + | chr4_2:49890406-49890425 | Msa0604360:CDS | 45.0% |
| GGAGAATATGCTTCCTGTTG+AGG | + | chr4_2:49890596-49890615 | Msa0604360:CDS | 45.0% | |
| ! | GGTTCGGTTGTTTCGGATAT+TGG | + | chr4_2:49890840-49890859 | Msa0604360:CDS | 45.0% |
| CTTGTGAAGCTTGAGCTTTG+TGG | + | chr4_2:49890894-49890913 | Msa0604360:CDS | 45.0% | |
| ! | TTGAGCTTTGTGGGTGTGAA+GGG | + | chr4_2:49890904-49890923 | Msa0604360:CDS | 45.0% |
| !! | GGTGTGAAGGGAGTTTTGAT+GGG | + | chr4_2:49890916-49890935 | Msa0604360:CDS | 45.0% |
| !! | TGGGAAGTGTTGTCAGATGT+TGG | + | chr4_2:49890950-49890969 | Msa0604360:CDS | 45.0% |
| !! | GAAGTGTTGTCAGATGTTGG+AGG | + | chr4_2:49890953-49890972 | Msa0604360:CDS | 45.0% |
| TCCGGGACTTGATGAGTATT+TGG | + | chr4_2:49891085-49891104 | Msa0604360:CDS | 45.0% | |
| CCCAAATACTCATCAAGTCC+CGG | - | chr4_2:49891089-49891108 | None:intergenic | 45.0% | |
| CCGGGACTTGATGAGTATTT+GGG | + | chr4_2:49891086-49891105 | Msa0604360:CDS | 45.0% | |
| !!! | CGGCTTTGTTTTCTGTTTGC+AGG | + | chr4_2:49891174-49891193 | Msa0604360:CDS | 45.0% |
| TTTCTGTTTGCAGGGTTGCT+AGG | + | chr4_2:49891183-49891202 | Msa0604360:CDS | 45.0% | |
| TTCTGTTTGCAGGGTTGCTA+GGG | + | chr4_2:49891184-49891203 | Msa0604360:CDS | 45.0% | |
| GATTGCTGGGGATTCGATAA+TGG | + | chr4_2:49891221-49891240 | Msa0604360:CDS | 45.0% | |
| CCACAAATTAGTCCATCACC+AGG | - | chr4_2:49891474-49891493 | None:intergenic | 45.0% | |
| !! | CCTGGTGATGGACTAATTTG+TGG | + | chr4_2:49891471-49891490 | Msa0604360:intron | 45.0% |
| GTATATTGGCAATCTGGTCG+GGG | + | chr4_2:49891626-49891645 | Msa0604360:intron | 45.0% | |
| TGCTCACTGCTAACAACTGA+AGG | + | chr4_2:49892014-49892033 | Msa0604360:CDS | 45.0% | |
| CTAATCCCCACAAGACTTGA+TGG | - | chr4_2:49892194-49892213 | None:intergenic | 45.0% | |
| ACCGCCAACATCTAAGCTAA+AGG | - | chr4_2:49892565-49892584 | None:intergenic | 45.0% | |
| ! | TTTAGCTTAGATGTTGGCGG+TGG | + | chr4_2:49892564-49892583 | Msa0604360:three_prime_UTR | 45.0% |
| AACCATGTTACCGTTGTCTG+TGG | + | chr4_2:49892740-49892759 | Msa0604360:three_prime_UTR | 45.0% | |
| ACCATGTTACCGTTGTCTGT+GGG | + | chr4_2:49892741-49892760 | Msa0604360:three_prime_UTR | 45.0% | |
| GGCGAATTAGGGTTAGGGTT+AGG | - | chr4_2:49890105-49890124 | None:intergenic | 50.0% | |
| ! | CTTGAGCTTTGTGGGTGTGA+AGG | + | chr4_2:49890903-49890922 | Msa0604360:CDS | 50.0% |
| !! | GGGTGTGAAGGGAGTTTTGA+TGG | + | chr4_2:49890915-49890934 | Msa0604360:CDS | 50.0% |
| GTTCTTGTCCTGCACTTGAG+AGG | + | chr4_2:49891108-49891127 | Msa0604360:CDS | 50.0% | |
| AAATGCAGCCTCTCAAGTGC+AGG | - | chr4_2:49891119-49891138 | None:intergenic | 50.0% | |
| !! | GCGGGATAAGAAGAGCGTTT+CGG | + | chr4_2:49891154-49891173 | Msa0604360:CDS | 50.0% |
| TCGGCTTTGCAACTGTTTGC+AGG | + | chr4_2:49891249-49891268 | Msa0604360:CDS | 50.0% | |
| AGTTTAGAGGTCCCTTTCCC+TGG | + | chr4_2:49891530-49891549 | Msa0604360:intron | 50.0% | |
| GTTTAGAGGTCCCTTTCCCT+GGG | + | chr4_2:49891531-49891550 | Msa0604360:intron | 50.0% | |
| CACACAGTATCCCAGGGAAA+GGG | - | chr4_2:49891544-49891563 | None:intergenic | 50.0% | |
| ACACACAGTATCCCAGGGAA+AGG | - | chr4_2:49891545-49891564 | None:intergenic | 50.0% | |
| CTACGCCCAGTTCACTATAG+TGG | + | chr4_2:49892660-49892679 | Msa0604360:three_prime_UTR | 50.0% | |
| ATTCTGGGTCGACGCCGAAT+TGG | + | chr4_2:49890562-49890581 | Msa0604360:CDS | 55.0% | |
| !! | GGATGATGGATGGATGGCTG+CGG | + | chr4_2:49891001-49891020 | Msa0604360:CDS | 55.0% |
| TGGTATCCGAGTTCGATCCC+TGG | + | chr4_2:49891453-49891472 | Msa0604360:intron | 55.0% | |
| CCATCACCAGGGATCGAACT+CGG | - | chr4_2:49891462-49891481 | None:intergenic | 55.0% | |
| GCCCACAGACAACGGTAACA+TGG | - | chr4_2:49892745-49892764 | None:intergenic | 55.0% | |
| AGCTACAGGCCCACAGACAA+CGG | - | chr4_2:49892753-49892772 | None:intergenic | 55.0% | |
| TTAAGGGGGATTGCGGCGTG+TGG | + | chr4_2:49890771-49890790 | Msa0604360:CDS | 60.0% | |
| TAAGGGGGATTGCGGCGTGT+GGG | + | chr4_2:49890772-49890791 | Msa0604360:CDS | 60.0% | |
| CCGAGTTCGATCCCTGGTGA+TGG | + | chr4_2:49891459-49891478 | Msa0604360:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 49889974 | 49892830 | 49889974 | ID=Msa0604360;Name=Msa0604360 |
| chr4_2 | mRNA | 49889974 | 49892830 | 49889974 | ID=Msa0604360-mRNA-1;Parent=Msa0604360;Name=Msa0604360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=80|1|1|1|0.5|0.33|3|545|494 |
| chr4_2 | exon | 49889974 | 49891270 | 49889974 | ID=Msa0604360-mRNA-1:exon:11603;Parent=Msa0604360-mRNA-1 |
| chr4_2 | exon | 49891986 | 49892330 | 49891986 | ID=Msa0604360-mRNA-1:exon:11604;Parent=Msa0604360-mRNA-1 |
| chr4_2 | exon | 49892363 | 49892830 | 49892363 | ID=Msa0604360-mRNA-1:exon:11605;Parent=Msa0604360-mRNA-1 |
| chr4_2 | five_prime_UTR | 49889974 | 49890053 | 49889974 | ID=Msa0604360-mRNA-1:five_prime_utr;Parent=Msa0604360-mRNA-1 |
| chr4_2 | CDS | 49890054 | 49891270 | 49890054 | ID=Msa0604360-mRNA-1:cds;Parent=Msa0604360-mRNA-1 |
| chr4_2 | CDS | 49891986 | 49892253 | 49891986 | ID=Msa0604360-mRNA-1:cds;Parent=Msa0604360-mRNA-1 |
| chr4_2 | three_prime_UTR | 49892254 | 49892330 | 49892254 | ID=Msa0604360-mRNA-1:three_prime_utr;Parent=Msa0604360-mRNA-1 |
| chr4_2 | three_prime_UTR | 49892363 | 49892830 | 49892363 | ID=Msa0604360-mRNA-1:three_prime_utr;Parent=Msa0604360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
