Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423200 | XP_003601959.2 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 3.18e-128 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423200 | G7J3S5 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 1.52e-128 | 369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002880 | Msa0423200 | 0.807690 | 4.467912e-50 | -8.615850e-47 |
| Msa0005560 | Msa0423200 | 0.800802 | 1.214950e-48 | -8.615850e-47 |
| Msa0010150 | Msa0423200 | 0.838988 | 2.073376e-57 | -8.615850e-47 |
| Msa0014590 | Msa0423200 | 0.844975 | 5.417267e-59 | -8.615850e-47 |
| Msa0015070 | Msa0423200 | 0.805352 | 1.391368e-49 | -8.615850e-47 |
| Msa0024650 | Msa0423200 | 0.808921 | 2.441709e-50 | -8.615850e-47 |
| Msa0025570 | Msa0423200 | 0.811956 | 5.400442e-51 | -8.615850e-47 |
| Msa0027860 | Msa0423200 | 0.817998 | 2.465846e-52 | -8.615850e-47 |
| Msa0046390 | Msa0423200 | 0.823258 | 1.526282e-53 | -8.615850e-47 |
| Msa0054050 | Msa0423200 | 0.802261 | 6.102586e-49 | -8.615850e-47 |
| Msa0059880 | Msa0423200 | 0.802473 | 5.517589e-49 | -8.615850e-47 |
| Msa0063540 | Msa0423200 | 0.826400 | 2.769494e-54 | -8.615850e-47 |
| Msa0073110 | Msa0423200 | 0.809586 | 1.758954e-50 | -8.615850e-47 |
| Msa0074620 | Msa0423200 | 0.827414 | 1.585013e-54 | -8.615850e-47 |
| Msa0085110 | Msa0423200 | 0.811733 | 6.039275e-51 | -8.615850e-47 |
| Msa0087900 | Msa0423200 | 0.841081 | 5.899058e-58 | -8.615850e-47 |
| Msa0095910 | Msa0423200 | 0.857174 | 1.953216e-62 | -8.615850e-47 |
| Msa0098380 | Msa0423200 | 0.820627 | 6.205318e-53 | -8.615850e-47 |
| Msa0105590 | Msa0423200 | -0.800512 | 1.392164e-48 | -8.615850e-47 |
| Msa0107830 | Msa0423200 | 0.818451 | 1.947136e-52 | -8.615850e-47 |
| Msa0111780 | Msa0423200 | 0.829054 | 6.379190e-55 | -8.615850e-47 |
| Msa0120450 | Msa0423200 | 0.810148 | 1.331266e-50 | -8.615850e-47 |
| Msa0121320 | Msa0423200 | 0.817768 | 2.778434e-52 | -8.615850e-47 |
| Msa0123530 | Msa0423200 | 0.810907 | 9.128309e-51 | -8.615850e-47 |
| Msa0125600 | Msa0423200 | 0.807628 | 4.606321e-50 | -8.615850e-47 |
| Msa0142560 | Msa0423200 | 0.810806 | 9.595273e-51 | -8.615850e-47 |
| Msa0150910 | Msa0423200 | 0.816427 | 5.562612e-52 | -8.615850e-47 |
| Msa0150920 | Msa0423200 | 0.824567 | 7.524672e-54 | -8.615850e-47 |
| Msa0163690 | Msa0423200 | 0.824274 | 8.821775e-54 | -8.615850e-47 |
| Msa0166180 | Msa0423200 | 0.805037 | 1.619797e-49 | -8.615850e-47 |
| Msa0168010 | Msa0423200 | 0.820499 | 6.643166e-53 | -8.615850e-47 |
| Msa0170990 | Msa0423200 | 0.818587 | 1.813295e-52 | -8.615850e-47 |
| Msa0175060 | Msa0423200 | 0.812896 | 3.365308e-51 | -8.615850e-47 |
| Msa0177550 | Msa0423200 | 0.808486 | 3.025560e-50 | -8.615850e-47 |
| Msa0184390 | Msa0423200 | 0.806944 | 6.432554e-50 | -8.615850e-47 |
| Msa0190670 | Msa0423200 | 0.821216 | 4.543752e-53 | -8.615850e-47 |
| Msa0190890 | Msa0423200 | 0.822266 | 2.597186e-53 | -8.615850e-47 |
| Msa0194230 | Msa0423200 | 0.813339 | 2.690915e-51 | -8.615850e-47 |
| Msa0195190 | Msa0423200 | 0.803270 | 3.776442e-49 | -8.615850e-47 |
| Msa0195580 | Msa0423200 | 0.823935 | 1.059441e-53 | -8.615850e-47 |
| Msa0197020 | Msa0423200 | 0.809805 | 1.578062e-50 | -8.615850e-47 |
| Msa0207640 | Msa0423200 | 0.825543 | 4.426896e-54 | -8.615850e-47 |
| Msa0209060 | Msa0423200 | 0.805015 | 1.636981e-49 | -8.615850e-47 |
| Msa0209520 | Msa0423200 | 0.821481 | 3.946410e-53 | -8.615850e-47 |
| Msa0210850 | Msa0423200 | 0.801474 | 8.851214e-49 | -8.615850e-47 |
| Msa0233210 | Msa0423200 | 0.809248 | 2.077878e-50 | -8.615850e-47 |
| Msa0366510 | Msa0423200 | 0.842743 | 2.145549e-58 | -8.615850e-47 |
| Msa0369990 | Msa0423200 | 0.806959 | 6.384815e-50 | -8.615850e-47 |
| Msa0370620 | Msa0423200 | 0.801897 | 7.248408e-49 | -8.615850e-47 |
| Msa0374040 | Msa0423200 | 0.868316 | 7.149550e-66 | -8.615850e-47 |
| Msa0379480 | Msa0423200 | 0.802158 | 6.405065e-49 | -8.615850e-47 |
| Msa0383770 | Msa0423200 | 0.812137 | 4.932750e-51 | -8.615850e-47 |
| Msa0390200 | Msa0423200 | 0.813522 | 2.453106e-51 | -8.615850e-47 |
| Msa0396700 | Msa0423200 | 0.837908 | 3.938003e-57 | -8.615850e-47 |
| Msa0396790 | Msa0423200 | 0.815308 | 9.883087e-52 | -8.615850e-47 |
| Msa0396860 | Msa0423200 | 0.835819 | 1.343940e-56 | -8.615850e-47 |
| Msa0401420 | Msa0423200 | 0.802647 | 5.080650e-49 | -8.615850e-47 |
| Msa0405200 | Msa0423200 | 0.815429 | 9.288009e-52 | -8.615850e-47 |
| Msa0414480 | Msa0423200 | 0.847155 | 1.383151e-59 | -8.615850e-47 |
| Msa0418160 | Msa0423200 | 0.826797 | 2.227509e-54 | -8.615850e-47 |
| Msa0423200 | Msa0423220 | 0.898012 | 8.047625e-77 | -8.615850e-47 |
| Msa0423200 | Msa0444400 | 0.836790 | 7.612345e-57 | -8.615850e-47 |
| Msa0423200 | Msa0449500 | 0.805686 | 1.184105e-49 | -8.615850e-47 |
| Msa0423200 | Msa0459930 | 0.803921 | 2.767670e-49 | -8.615850e-47 |
| Msa0423200 | Msa0464310 | 0.851762 | 7.185458e-61 | -8.615850e-47 |
| Msa0423200 | Msa0469450 | 0.827581 | 1.445781e-54 | -8.615850e-47 |
| Msa0423200 | Msa0469460 | 0.813602 | 2.356018e-51 | -8.615850e-47 |
| Msa0423200 | Msa0471390 | 0.809022 | 2.323901e-50 | -8.615850e-47 |
| Msa0423200 | Msa0490060 | 0.815774 | 7.781407e-52 | -8.615850e-47 |
| Msa0423200 | Msa0490100 | 0.800205 | 1.607659e-48 | -8.615850e-47 |
| Msa0423200 | Msa0491780 | 0.822796 | 1.955260e-53 | -8.615850e-47 |
| Msa0423200 | Msa0491800 | 0.841895 | 3.599987e-58 | -8.615850e-47 |
| Msa0423200 | Msa0491950 | 0.802760 | 4.813719e-49 | -8.615850e-47 |
| Msa0423200 | Msa0496060 | 0.824420 | 8.148647e-54 | -8.615850e-47 |
| Msa0423200 | Msa0496070 | 0.844451 | 7.500299e-59 | -8.615850e-47 |
| Msa0423200 | Msa0497680 | 0.824738 | 6.860827e-54 | -8.615850e-47 |
| Msa0423200 | Msa0515130 | 0.844468 | 7.420121e-59 | -8.615850e-47 |
| Msa0423200 | Msa0515150 | 0.856035 | 4.223162e-62 | -8.615850e-47 |
| Msa0423200 | Msa0532660 | 0.802203 | 6.270648e-49 | -8.615850e-47 |
| Msa0423200 | Msa0535570 | 0.844473 | 7.397852e-59 | -8.615850e-47 |
| Msa0423200 | Msa0538440 | 0.819692 | 1.016300e-52 | -8.615850e-47 |
| Msa0423200 | Msa0538450 | 0.801260 | 9.794199e-49 | -8.615850e-47 |
| Msa0423200 | Msa0538520 | 0.810056 | 1.393499e-50 | -8.615850e-47 |
| Msa0423200 | Msa0538530 | 0.810595 | 1.065954e-50 | -8.615850e-47 |
| Msa0423200 | Msa0540640 | 0.817384 | 3.391452e-52 | -8.615850e-47 |
| Msa0423200 | Msa0545680 | 0.824649 | 7.198133e-54 | -8.615850e-47 |
| Msa0423200 | Msa0561830 | 0.809326 | 1.999486e-50 | -8.615850e-47 |
| Msa0423200 | Msa0583390 | 0.805572 | 1.251363e-49 | -8.615850e-47 |
| Msa0423200 | Msa0591490 | 0.848995 | 4.295775e-60 | -8.615850e-47 |
| Msa0423200 | Msa0594330 | 0.828932 | 6.827264e-55 | -8.615850e-47 |
| Msa0423200 | Msa0601400 | 0.814739 | 1.321352e-51 | -8.615850e-47 |
| Msa0423200 | Msa0602050 | 0.814935 | 1.195489e-51 | -8.615850e-47 |
| Msa0423200 | Msa0606470 | 0.806758 | 7.039809e-50 | -8.615850e-47 |
| Msa0423200 | Msa0606600 | 0.820818 | 5.610227e-53 | -8.615850e-47 |
| Msa0423200 | Msa0614020 | -0.804469 | 2.128355e-49 | -8.615850e-47 |
| Msa0423200 | Msa0631700 | 0.837754 | 4.314047e-57 | -8.615850e-47 |
| Msa0423200 | Msa0634290 | 0.811060 | 8.454051e-51 | -8.615850e-47 |
| Msa0423200 | Msa0641700 | 0.806034 | 1.000667e-49 | -8.615850e-47 |
| Msa0423200 | Msa0643840 | 0.800009 | 1.761654e-48 | -8.615850e-47 |
| Msa0423200 | Msa0647300 | 0.818498 | 1.899281e-52 | -8.615850e-47 |
| Msa0423200 | Msa0649250 | -0.802359 | 5.823546e-49 | -8.615850e-47 |
| Msa0423200 | Msa0655370 | 0.806479 | 8.064794e-50 | -8.615850e-47 |
| Msa0423200 | Msa0668220 | 0.809211 | 2.116866e-50 | -8.615850e-47 |
| Msa0423200 | Msa0670360 | 0.832857 | 7.438759e-56 | -8.615850e-47 |
| Msa0423200 | Msa0671640 | 0.812876 | 3.399917e-51 | -8.615850e-47 |
| Msa0423200 | Msa0680460 | 0.809267 | 2.059011e-50 | -8.615850e-47 |
| Msa0423200 | Msa0686830 | 0.821272 | 4.408785e-53 | -8.615850e-47 |
| Msa0423200 | Msa0699170 | 0.809738 | 1.631483e-50 | -8.615850e-47 |
| Msa0423200 | Msa0708680 | 0.807283 | 5.452883e-50 | -8.615850e-47 |
| Msa0423200 | Msa0715220 | 0.805036 | 1.620376e-49 | -8.615850e-47 |
| Msa0423200 | Msa0718770 | 0.802995 | 4.304780e-49 | -8.615850e-47 |
| Msa0423200 | Msa0720490 | 0.820927 | 5.296563e-53 | -8.615850e-47 |
| Msa0423200 | Msa0720870 | 0.815347 | 9.686075e-52 | -8.615850e-47 |
| Msa0423200 | Msa0727480 | 0.815498 | 8.963958e-52 | -8.615850e-47 |
| Msa0423200 | Msa0733560 | 0.806422 | 8.290296e-50 | -8.615850e-47 |
| Msa0423200 | Msa0751960 | 0.817243 | 3.648345e-52 | -8.615850e-47 |
| Msa0423200 | Msa0754530 | 0.820637 | 6.172539e-53 | -8.615850e-47 |
| Msa0423200 | Msa0757120 | 0.819453 | 1.152042e-52 | -8.615850e-47 |
| Msa0423200 | Msa0761420 | 0.803237 | 3.837371e-49 | -8.615850e-47 |
| Msa0423200 | Msa0761570 | 0.808993 | 2.357346e-50 | -8.615850e-47 |
| Msa0423200 | Msa0768670 | 0.808878 | 2.493980e-50 | -8.615850e-47 |
| Msa0423200 | Msa0768720 | 0.801297 | 9.624163e-49 | -8.615850e-47 |
| Msa0423200 | Msa0777070 | 0.815640 | 8.333470e-52 | -8.615850e-47 |
| Msa0423200 | Msa0787860 | 0.800896 | 1.162485e-48 | -8.615850e-47 |
| Msa0423200 | Msa0792410 | 0.810917 | 9.082072e-51 | -8.615850e-47 |
| Msa0423200 | Msa0803940 | 0.823640 | 1.242629e-53 | -8.615850e-47 |
| Msa0423200 | Msa0806930 | 0.814811 | 1.273832e-51 | -8.615850e-47 |
| Msa0423200 | Msa0812220 | 0.804582 | 2.016275e-49 | -8.615850e-47 |
| Msa0423200 | Msa0814160 | 0.816669 | 4.908907e-52 | -8.615850e-47 |
| Msa0423200 | Msa0816140 | 0.821194 | 4.596567e-53 | -8.615850e-47 |
| Msa0423200 | Msa0824850 | 0.813985 | 1.939421e-51 | -8.615850e-47 |
| Msa0423200 | Msa0827800 | 0.822960 | 1.790607e-53 | -8.615850e-47 |
| Msa0423200 | Msa0829990 | 0.805600 | 1.234203e-49 | -8.615850e-47 |
| Msa0423200 | Msa0831890 | 0.804580 | 2.017568e-49 | -8.615850e-47 |
| Msa0423200 | Msa0833230 | 0.815617 | 8.432916e-52 | -8.615850e-47 |
| Msa0423200 | Msa0839040 | 0.810322 | 1.220885e-50 | -8.615850e-47 |
| Msa0423200 | Msa0841670 | 0.805636 | 1.213216e-49 | -8.615850e-47 |
| Msa0423200 | Msa0841930 | 0.823904 | 1.077651e-53 | -8.615850e-47 |
| Msa0423200 | Msa0854840 | 0.818660 | 1.745199e-52 | -8.615850e-47 |
| Msa0423200 | Msa0861730 | 0.804148 | 2.482689e-49 | -8.615850e-47 |
| Msa0423200 | Msa0863860 | 0.813361 | 2.661222e-51 | -8.615850e-47 |
| Msa0423200 | Msa0864160 | 0.813573 | 2.390052e-51 | -8.615850e-47 |
| Msa0423200 | Msa0867080 | 0.825503 | 4.524423e-54 | -8.615850e-47 |
| Msa0423200 | Msa0867470 | 0.802253 | 6.125324e-49 | -8.615850e-47 |
| Msa0423200 | Msa0873880 | 0.810161 | 1.322408e-50 | -8.615850e-47 |
| Msa0423200 | Msa0874750 | 0.803254 | 3.806034e-49 | -8.615850e-47 |
| Msa0423200 | Msa0893840 | 0.814406 | 1.566226e-51 | -8.615850e-47 |
| Msa0423200 | Msa0896910 | 0.811487 | 6.832411e-51 | -8.615850e-47 |
| Msa0423200 | Msa0896920 | 0.823776 | 1.154642e-53 | -8.615850e-47 |
| Msa0423200 | Msa0896950 | 0.817777 | 2.765358e-52 | -8.615850e-47 |
| Msa0423200 | Msa0906680 | 0.803766 | 2.980445e-49 | -8.615850e-47 |
| Msa0423200 | Msa0913550 | 0.800514 | 1.390555e-48 | -8.615850e-47 |
| Msa0423200 | Msa0944470 | 0.831717 | 1.424847e-55 | -8.615850e-47 |
| Msa0423200 | Msa0960580 | 0.804794 | 1.820984e-49 | -8.615850e-47 |
| Msa0423200 | Msa0975950 | 0.805443 | 1.331971e-49 | -8.615850e-47 |
| Msa0423200 | Msa0993710 | 0.810011 | 1.424695e-50 | -8.615850e-47 |
| Msa0423200 | Msa0996980 | 0.812150 | 4.899820e-51 | -8.615850e-47 |
| Msa0423200 | Msa0996990 | 0.808180 | 3.515196e-50 | -8.615850e-47 |
| Msa0423200 | Msa0998810 | 0.815393 | 9.458924e-52 | -8.615850e-47 |
| Msa0423200 | Msa1002820 | 0.802972 | 4.352613e-49 | -8.615850e-47 |
| Msa0423200 | Msa1006030 | 0.803805 | 2.925210e-49 | -8.615850e-47 |
| Msa0423200 | Msa1006170 | 0.811115 | 8.224953e-51 | -8.615850e-47 |
| Msa0423200 | Msa1009540 | 0.820412 | 6.955425e-53 | -8.615850e-47 |
| Msa0423200 | Msa1022490 | 0.826007 | 3.435973e-54 | -8.615850e-47 |
| Msa0423200 | Msa1022510 | 0.832062 | 1.171445e-55 | -8.615850e-47 |
| Msa0423200 | Msa1024480 | 0.828452 | 8.921990e-55 | -8.615850e-47 |
| Msa0423200 | Msa1030320 | 0.815774 | 7.779694e-52 | -8.615850e-47 |
| Msa0423200 | Msa1035050 | 0.807504 | 4.895317e-50 | -8.615850e-47 |
| Msa0423200 | Msa1041910 | 0.819232 | 1.294145e-52 | -8.615850e-47 |
| Msa0423200 | Msa1047300 | 0.818782 | 1.637637e-52 | -8.615850e-47 |
| Msa0423200 | Msa1047340 | 0.818923 | 1.521705e-52 | -8.615850e-47 |
| Msa0423200 | Msa1048350 | 0.817346 | 3.458399e-52 | -8.615850e-47 |
| Msa0423200 | Msa1049400 | 0.817355 | 3.442488e-52 | -8.615850e-47 |
| Msa0423200 | Msa1061670 | 0.843139 | 1.683982e-58 | -8.615850e-47 |
| Msa0423200 | Msa1062070 | 0.807704 | 4.439195e-50 | -8.615850e-47 |
| Msa0423200 | Msa1064940 | 0.834442 | 2.989781e-56 | -8.615850e-47 |
| Msa0423200 | Msa1075090 | 0.805742 | 1.152422e-49 | -8.615850e-47 |
| Msa0423200 | Msa1076830 | 0.807640 | 4.579475e-50 | -8.615850e-47 |
| Msa0423200 | Msa1081610 | 0.809972 | 1.452491e-50 | -8.615850e-47 |
| Msa0423200 | Msa1087370 | 0.839125 | 1.910173e-57 | -8.615850e-47 |
| Msa0423200 | Msa1087380 | 0.834178 | 3.483003e-56 | -8.615850e-47 |
| Msa0423200 | Msa1094780 | 0.809196 | 2.131871e-50 | -8.615850e-47 |
| Msa0423200 | Msa1100330 | 0.809443 | 1.887492e-50 | -8.615850e-47 |
| Msa0423200 | Msa1103450 | 0.823246 | 1.535925e-53 | -8.615850e-47 |
| Msa0423200 | Msa1106680 | 0.844208 | 8.718674e-59 | -8.615850e-47 |
| Msa0423200 | Msa1106960 | 0.844305 | 8.209101e-59 | -8.615850e-47 |
| Msa0423200 | Msa1107220 | 0.811447 | 6.968803e-51 | -8.615850e-47 |
| Msa0423200 | Msa1107250 | 0.805674 | 1.190887e-49 | -8.615850e-47 |
| Msa0423200 | Msa1108560 | 0.832419 | 9.555072e-56 | -8.615850e-47 |
| Msa0423200 | Msa1109540 | 0.811650 | 6.297579e-51 | -8.615850e-47 |
| Msa0423200 | Msa1115900 | 0.802691 | 4.975965e-49 | -8.615850e-47 |
| Msa0423200 | Msa1123250 | 0.806161 | 9.407272e-50 | -8.615850e-47 |
| Msa0423200 | Msa1138110 | 0.828317 | 9.617326e-55 | -8.615850e-47 |
| Msa0423200 | Msa1147010 | 0.836439 | 9.352338e-57 | -8.615850e-47 |
| Msa0423200 | Msa1147030 | 0.826731 | 2.309147e-54 | -8.615850e-47 |
| Msa0423200 | Msa1148210 | 0.811484 | 6.842672e-51 | -8.615850e-47 |
| Msa0423200 | Msa1150740 | 0.802184 | 6.329422e-49 | -8.615850e-47 |
| Msa0423200 | Msa1156240 | 0.804682 | 1.921070e-49 | -8.615850e-47 |
| Msa0423200 | Msa1157210 | 0.824872 | 6.377647e-54 | -8.615850e-47 |
| Msa0423200 | Msa1160540 | 0.811826 | 5.764042e-51 | -8.615850e-47 |
| Msa0423200 | Msa1162430 | 0.802319 | 5.936165e-49 | -8.615850e-47 |
| Msa0423200 | Msa1167960 | 0.823753 | 1.168993e-53 | -8.615850e-47 |
| Msa0423200 | Msa1170340 | 0.819758 | 9.815409e-53 | -8.615850e-47 |
| Msa0423200 | Msa1181090 | 0.817230 | 3.673691e-52 | -8.615850e-47 |
| Msa0423200 | Msa1183870 | 0.809759 | 1.614055e-50 | -8.615850e-47 |
| Msa0423200 | Msa1186340 | 0.806140 | 9.506614e-50 | -8.615850e-47 |
| Msa0423200 | Msa1188080 | 0.804615 | 1.984622e-49 | -8.615850e-47 |
| Msa0423200 | Msa1191270 | 0.805223 | 1.481047e-49 | -8.615850e-47 |
| Msa0423200 | Msa1191350 | 0.817463 | 3.255803e-52 | -8.615850e-47 |
| Msa0423200 | Msa1202110 | 0.805728 | 1.160459e-49 | -8.615850e-47 |
| Msa0423200 | Msa1223540 | 0.806981 | 6.317091e-50 | -8.615850e-47 |
| Msa0423200 | Msa1223620 | 0.805227 | 1.477574e-49 | -8.615850e-47 |
| Msa0423200 | Msa1223710 | 0.802876 | 4.556727e-49 | -8.615850e-47 |
| Msa0423200 | Msa1223960 | 0.828293 | 9.746618e-55 | -8.615850e-47 |
| Msa0423200 | Msa1223990 | 0.809514 | 1.822132e-50 | -8.615850e-47 |
| Msa0423200 | Msa1225850 | 0.815302 | 9.913523e-52 | -8.615850e-47 |
| Msa0423200 | Msa1225890 | 0.801668 | 8.076841e-49 | -8.615850e-47 |
| Msa0423200 | Msa1238250 | 0.813225 | 2.850720e-51 | -8.615850e-47 |
| Msa0423200 | Msa1240710 | 0.830486 | 2.858973e-55 | -8.615850e-47 |
| Msa0423200 | Msa1254870 | 0.804730 | 1.877069e-49 | -8.615850e-47 |
| Msa0423200 | Msa1263110 | 0.825135 | 5.527107e-54 | -8.615850e-47 |
| Msa0423200 | Msa1263120 | 0.807188 | 5.711690e-50 | -8.615850e-47 |
| Msa0423200 | Msa1263520 | 0.802831 | 4.655060e-49 | -8.615850e-47 |
| Msa0423200 | Msa1267990 | 0.811208 | 7.853961e-51 | -8.615850e-47 |
| Msa0423200 | Msa1271960 | 0.805197 | 1.499285e-49 | -8.615850e-47 |
| Msa0423200 | Msa1283600 | 0.802497 | 5.454168e-49 | -8.615850e-47 |
| Msa0423200 | Msa1294020 | 0.806597 | 7.613947e-50 | -8.615850e-47 |
| Msa0423200 | Msa1300610 | 0.805179 | 1.512460e-49 | -8.615850e-47 |
| Msa0423200 | Msa1309390 | 0.818242 | 2.171442e-52 | -8.615850e-47 |
| Msa0423200 | Msa1319030 | 0.806891 | 6.601228e-50 | -8.615850e-47 |
| Msa0423200 | Msa1319190 | 0.809085 | 2.252631e-50 | -8.615850e-47 |
| Msa0423200 | Msa1321970 | 0.812683 | 3.747808e-51 | -8.615850e-47 |
| Msa0423200 | Msa1322500 | 0.818285 | 2.122580e-52 | -8.615850e-47 |
| Msa0423200 | Msa1328430 | 0.806006 | 1.014243e-49 | -8.615850e-47 |
| Msa0423200 | Msa1341030 | 0.808066 | 3.717346e-50 | -8.615850e-47 |
| Msa0423200 | Msa1343590 | 0.817206 | 3.718675e-52 | -8.615850e-47 |
| Msa0423200 | Msa1355340 | 0.847165 | 1.374332e-59 | -8.615850e-47 |
| Msa0423200 | Msa1357840 | 0.809504 | 1.831329e-50 | -8.615850e-47 |
| Msa0423200 | Msa1376070 | 0.810676 | 1.023709e-50 | -8.615850e-47 |
| Msa0423200 | Msa1377980 | -0.800663 | 1.296925e-48 | -8.615850e-47 |
| Msa0423200 | Msa1380740 | 0.835359 | 1.757155e-56 | -8.615850e-47 |
| Msa0423200 | Msa1387480 | 0.813522 | 2.453516e-51 | -8.615850e-47 |
| Msa0423200 | Msa1411550 | 0.852152 | 5.568816e-61 | -8.615850e-47 |
| Msa0423200 | Msa1412360 | 0.826367 | 2.820915e-54 | -8.615850e-47 |
| Msa0423200 | Msa1441450 | 0.811997 | 5.291821e-51 | -8.615850e-47 |
| Msa0423200 | Msa1445900 | 0.803919 | 2.770213e-49 | -8.615850e-47 |
| Msa0423200 | Msa1453650 | 0.805195 | 1.500944e-49 | -8.615850e-47 |
| Msa0423200 | Msa1455360 | 0.800247 | 1.576261e-48 | -8.615850e-47 |
| Msa0423200 | Msa1458270 | 0.821206 | 4.566391e-53 | -8.615850e-47 |
| Msa0423200 | Msa1459610 | 0.821854 | 3.235877e-53 | -8.615850e-47 |
| Msa0423200 | Msa1461660 | 0.831722 | 1.420479e-55 | -8.615850e-47 |
| Msa0423200 | Msa1462610 | 0.813512 | 2.465973e-51 | -8.615850e-47 |
| Msa0248320 | Msa0423200 | 0.812497 | 4.115852e-51 | -8.615850e-47 |
| Msa0261400 | Msa0423200 | 0.808845 | 2.534860e-50 | -8.615850e-47 |
| Msa0266140 | Msa0423200 | -0.801492 | 8.779424e-49 | -8.615850e-47 |
| Msa0267700 | Msa0423200 | 0.801633 | 8.211450e-49 | -8.615850e-47 |
| Msa0269240 | Msa0423200 | 0.816688 | 4.861287e-52 | -8.615850e-47 |
| Msa0269710 | Msa0423200 | 0.821288 | 4.371391e-53 | -8.615850e-47 |
| Msa0270730 | Msa0423200 | -0.810628 | 1.048906e-50 | -8.615850e-47 |
| Msa0274250 | Msa0423200 | 0.839293 | 1.727591e-57 | -8.615850e-47 |
| Msa0274260 | Msa0423200 | 0.834525 | 2.849561e-56 | -8.615850e-47 |
| Msa0276580 | Msa0423200 | 0.816955 | 4.234030e-52 | -8.615850e-47 |
| Msa0278460 | Msa0423200 | 0.813520 | 2.454891e-51 | -8.615850e-47 |
| Msa0278950 | Msa0423200 | 0.825220 | 5.277298e-54 | -8.615850e-47 |
| Msa0281190 | Msa0423200 | 0.801115 | 1.048315e-48 | -8.615850e-47 |
| Msa0285580 | Msa0423200 | 0.811865 | 5.652264e-51 | -8.615850e-47 |
| Msa0288540 | Msa0423200 | 0.811668 | 6.239004e-51 | -8.615850e-47 |
| Msa0303900 | Msa0423200 | 0.805125 | 1.552664e-49 | -8.615850e-47 |
| Msa0307040 | Msa0423200 | 0.800437 | 1.441728e-48 | -8.615850e-47 |
| Msa0307630 | Msa0423200 | 0.812749 | 3.625540e-51 | -8.615850e-47 |
| Msa0311540 | Msa0423200 | 0.827527 | 1.489636e-54 | -8.615850e-47 |
| Msa0314440 | Msa0423200 | 0.824206 | 9.151975e-54 | -8.615850e-47 |
| Msa0316600 | Msa0423200 | 0.808219 | 3.447803e-50 | -8.615850e-47 |
| Msa0328090 | Msa0423200 | 0.821109 | 4.808752e-53 | -8.615850e-47 |
| Msa0333770 | Msa0423200 | 0.811924 | 5.488755e-51 | -8.615850e-47 |
| Msa0346170 | Msa0423200 | 0.838219 | 3.274543e-57 | -8.615850e-47 |
| Msa0348370 | Msa0423200 | 0.807377 | 5.207303e-50 | -8.615850e-47 |
| Msa0349910 | Msa0423200 | 0.810256 | 1.261656e-50 | -8.615850e-47 |
| Msa0354550 | Msa0423200 | 0.830674 | 2.571452e-55 | -8.615850e-47 |
| Msa0357530 | Msa0423200 | 0.800425 | 1.450057e-48 | -8.615850e-47 |
| Msa0357560 | Msa0423200 | 0.800968 | 1.123505e-48 | -8.615850e-47 |
| Msa0358470 | Msa0423200 | 0.800008 | 1.762829e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423200 | MtrunA17_Chr3g0124111 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 2.93e-132 | 369 |
| Msa0423200 | MtrunA17_Chr3g0124141 | 86.935 | 199 | 26 | 0 | 1 | 199 | 1 | 199 | 2.14e-129 | 362 |
| Msa0423200 | MtrunA17_Chr3g0124061 | 83.920 | 199 | 32 | 0 | 1 | 199 | 1 | 199 | 1.22e-125 | 352 |
| Msa0423200 | MtrunA17_Chr3g0124091 | 84.080 | 201 | 29 | 2 | 1 | 199 | 1 | 200 | 1.75e-123 | 347 |
| Msa0423200 | MtrunA17_Chr3g0124151 | 83.019 | 106 | 18 | 0 | 94 | 199 | 1 | 106 | 6.11e-61 | 185 |
| Msa0423200 | MtrunA17_Chr3g0124131 | 88.235 | 51 | 6 | 0 | 1 | 51 | 1 | 51 | 2.73e-27 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423200 | AT5G65030.1 | 31.472 | 197 | 110 | 7 | 11 | 187 | 10 | 201 | 8.57e-25 | 96.7 |
| Msa0423200 | AT5G10210.1 | 30.808 | 198 | 111 | 8 | 15 | 199 | 13 | 197 | 4.70e-24 | 94.4 |
Find 38 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCCAAATCATTGCCCTTT+TGG | 0.190841 | 3_2:+72965682 | Msa0423200:CDS |
| ATATGGGGCTCCAAACTAAT+TGG | 0.223958 | 3_2:+72965798 | Msa0423200:CDS |
| ACACTAGGCTTTGTTGATTA+AGG | 0.234215 | 3_2:-72965755 | None:intergenic |
| CTCACCTTTCCCAATTAGTT+TGG | 0.258127 | 3_2:-72965808 | None:intergenic |
| TTAATCTCCACTTCCACTTC+TGG | 0.281665 | 3_2:-72965936 | None:intergenic |
| AGCTAAGGCAAAGGAAGATA+TGG | 0.333930 | 3_2:+72965781 | Msa0423200:CDS |
| TGCACTTGGCGCAGCTTTGG+AGG | 0.390376 | 3_2:+72966088 | Msa0423200:CDS |
| GTCCCAAAAGGGCAATGATT+TGG | 0.392085 | 3_2:-72965685 | None:intergenic |
| ATTTGCACTTGGCGCAGCTT+TGG | 0.400082 | 3_2:+72966085 | Msa0423200:CDS |
| GATTCAAGAATCACTTTCCA+TGG | 0.437928 | 3_2:-72965834 | None:intergenic |
| TATGGGGCTCCAAACTAATT+GGG | 0.456932 | 3_2:+72965799 | Msa0423200:CDS |
| GCTAAGGCAAAGGAAGATAT+GGG | 0.457270 | 3_2:+72965782 | Msa0423200:CDS |
| AAAATGGTTGAAGATGGATT+TGG | 0.470551 | 3_2:+72965875 | Msa0423200:CDS |
| AGTAGCTTCGGTTGCTGAGA+TGG | 0.471131 | 3_2:+72965965 | Msa0423200:CDS |
| GATTAAAATAAAAGTAGCTT+CGG | 0.474275 | 3_2:+72965953 | Msa0423200:CDS |
| ACTAAATGACTCGTCCCAAA+AGG | 0.477554 | 3_2:-72965697 | None:intergenic |
| CTGTGAATTGAGAATAATAC+AGG | 0.480110 | 3_2:+72965557 | Msa0423200:CDS |
| TTGGGAAAGGTGAGATTCCA+TGG | 0.490587 | 3_2:+72965817 | Msa0423200:CDS |
| AAAGCCTAGTGTTGGAGCTA+AGG | 0.499139 | 3_2:+72965766 | Msa0423200:CDS |
| TTTGCCTTAGCTCCAACACT+AGG | 0.507447 | 3_2:-72965770 | None:intergenic |
| AGATGGAGAAGCAAAATAAG+AGG | 0.509817 | 3_2:+72965982 | Msa0423200:CDS |
| CTAAATGACTCGTCCCAAAA+GGG | 0.528554 | 3_2:-72965696 | None:intergenic |
| ATGAATAATTTGAATGAGTG+TGG | 0.533229 | 3_2:+72966008 | Msa0423200:CDS |
| ACGGCCATGACCATCGTGCT+TGG | 0.538014 | 3_2:+72966039 | Msa0423200:CDS |
| CCAAAAGGGCAATGATTTGG+CGG | 0.551334 | 3_2:-72965682 | None:intergenic |
| TAATCAACAAAGCCTAGTGT+TGG | 0.564525 | 3_2:+72965758 | Msa0423200:CDS |
| AGCACCAAGCACGATGGTCA+TGG | 0.566327 | 3_2:-72966043 | None:intergenic |
| AGTCGAAGTGATTGCAAAGA+GGG | 0.568276 | 3_2:+72965900 | Msa0423200:CDS |
| CATAACGCCAGAAGTGGAAG+TGG | 0.570407 | 3_2:+72965929 | Msa0423200:CDS |
| GATTCTTGAATCACAAAACA+TGG | 0.583125 | 3_2:+72965845 | Msa0423200:CDS |
| TATGTTCATAACGCCAGAAG+TGG | 0.583659 | 3_2:+72965923 | Msa0423200:CDS |
| ACATATGAAGATACATGAGA+TGG | 0.585374 | 3_2:-72965525 | None:intergenic |
| TAGTGTTGGAGCTAAGGCAA+AGG | 0.590191 | 3_2:+72965772 | Msa0423200:CDS |
| GATTGTGATATATTTGCACT+TGG | 0.591421 | 3_2:+72966074 | Msa0423200:CDS |
| GGCTCCAAACTAATTGGGAA+AGG | 0.604038 | 3_2:+72965804 | Msa0423200:CDS |
| GAGTCGAAGTGATTGCAAAG+AGG | 0.661989 | 3_2:+72965899 | Msa0423200:CDS |
| CAGCGCAGCACCAAGCACGA+TGG | 0.681591 | 3_2:-72966049 | None:intergenic |
| CTAAGGCAAAGGAAGATATG+GGG | 0.687073 | 3_2:+72965783 | Msa0423200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTAAAATAAAAGTAGCTT+CGG | + | chr3_2:72965953-72965972 | Msa0423200:CDS | 20.0% |
| ! | AAAACATGGAGCTAAAAAAA+TGG | + | chr3_2:72965859-72965878 | Msa0423200:CDS | 25.0% |
| ! | ATGAATAATTTGAATGAGTG+TGG | + | chr3_2:72966008-72966027 | Msa0423200:CDS | 25.0% |
| ACATATGAAGATACATGAGA+TGG | - | chr3_2:72965528-72965547 | None:intergenic | 30.0% | |
| CTGTGAATTGAGAATAATAC+AGG | + | chr3_2:72965557-72965576 | Msa0423200:CDS | 30.0% | |
| !!! | ATTCTTTTGTTGTTCTCTGT+TGG | - | chr3_2:72965639-72965658 | None:intergenic | 30.0% |
| ! | AAGGTTTTCCATGAAATCTT+GGG | - | chr3_2:72965739-72965758 | None:intergenic | 30.0% |
| ! | TAAGGTTTTCCATGAAATCT+TGG | - | chr3_2:72965740-72965759 | None:intergenic | 30.0% |
| GATTCTTGAATCACAAAACA+TGG | + | chr3_2:72965845-72965864 | Msa0423200:CDS | 30.0% | |
| GCTAAAAAAATGGTTGAAGA+TGG | + | chr3_2:72965869-72965888 | Msa0423200:CDS | 30.0% | |
| ! | AAAATGGTTGAAGATGGATT+TGG | + | chr3_2:72965875-72965894 | Msa0423200:CDS | 30.0% |
| GATTGTGATATATTTGCACT+TGG | + | chr3_2:72966074-72966093 | Msa0423200:CDS | 30.0% | |
| ! | AGGTTTTCCATGAAATCTTG+GGG | - | chr3_2:72965738-72965757 | None:intergenic | 35.0% |
| !! | ACACTAGGCTTTGTTGATTA+AGG | - | chr3_2:72965758-72965777 | None:intergenic | 35.0% |
| TAATCAACAAAGCCTAGTGT+TGG | + | chr3_2:72965758-72965777 | Msa0423200:CDS | 35.0% | |
| GATTCAAGAATCACTTTCCA+TGG | - | chr3_2:72965837-72965856 | None:intergenic | 35.0% | |
| AGATGGAGAAGCAAAATAAG+AGG | + | chr3_2:72965982-72966001 | Msa0423200:CDS | 35.0% | |
| AATGAGTGTGGATGCAAAAA+CGG | + | chr3_2:72966020-72966039 | Msa0423200:CDS | 35.0% | |
| ! | CGACGAAAAACTTGTTTGCA+AGG | + | chr3_2:72965604-72965623 | Msa0423200:CDS | 40.0% |
| CTAAATGACTCGTCCCAAAA+GGG | - | chr3_2:72965699-72965718 | None:intergenic | 40.0% | |
| ACTAAATGACTCGTCCCAAA+AGG | - | chr3_2:72965700-72965719 | None:intergenic | 40.0% | |
| ! | GGTTTTCCATGAAATCTTGG+GGG | - | chr3_2:72965737-72965756 | None:intergenic | 40.0% |
| AGCTAAGGCAAAGGAAGATA+TGG | + | chr3_2:72965781-72965800 | Msa0423200:CDS | 40.0% | |
| GCTAAGGCAAAGGAAGATAT+GGG | + | chr3_2:72965782-72965801 | Msa0423200:CDS | 40.0% | |
| CTAAGGCAAAGGAAGATATG+GGG | + | chr3_2:72965783-72965802 | Msa0423200:CDS | 40.0% | |
| ATATGGGGCTCCAAACTAAT+TGG | + | chr3_2:72965798-72965817 | Msa0423200:CDS | 40.0% | |
| TATGGGGCTCCAAACTAATT+GGG | + | chr3_2:72965799-72965818 | Msa0423200:CDS | 40.0% | |
| CTCACCTTTCCCAATTAGTT+TGG | - | chr3_2:72965811-72965830 | None:intergenic | 40.0% | |
| AGTCGAAGTGATTGCAAAGA+GGG | + | chr3_2:72965900-72965919 | Msa0423200:CDS | 40.0% | |
| TATGTTCATAACGCCAGAAG+TGG | + | chr3_2:72965923-72965942 | Msa0423200:CDS | 40.0% | |
| TTAATCTCCACTTCCACTTC+TGG | - | chr3_2:72965939-72965958 | None:intergenic | 40.0% | |
| ! | CCAAAAGGGCAATGATTTGG+CGG | - | chr3_2:72965685-72965704 | None:intergenic | 45.0% |
| ! | CGCCAAATCATTGCCCTTTT+GGG | + | chr3_2:72965683-72965702 | Msa0423200:CDS | 45.0% |
| GTCCCAAAAGGGCAATGATT+TGG | - | chr3_2:72965688-72965707 | None:intergenic | 45.0% | |
| TTCTTGCCCCCAAGATTTCA+TGG | + | chr3_2:72965728-72965747 | Msa0423200:CDS | 45.0% | |
| ! | AAAGCCTAGTGTTGGAGCTA+AGG | + | chr3_2:72965766-72965785 | Msa0423200:CDS | 45.0% |
| TTTGCCTTAGCTCCAACACT+AGG | - | chr3_2:72965773-72965792 | None:intergenic | 45.0% | |
| ! | TAGTGTTGGAGCTAAGGCAA+AGG | + | chr3_2:72965772-72965791 | Msa0423200:CDS | 45.0% |
| GGCTCCAAACTAATTGGGAA+AGG | + | chr3_2:72965804-72965823 | Msa0423200:CDS | 45.0% | |
| TTGGGAAAGGTGAGATTCCA+TGG | + | chr3_2:72965817-72965836 | Msa0423200:CDS | 45.0% | |
| GAGTCGAAGTGATTGCAAAG+AGG | + | chr3_2:72965899-72965918 | Msa0423200:CDS | 45.0% | |
| ! | CCGCCAAATCATTGCCCTTT+TGG | + | chr3_2:72965682-72965701 | Msa0423200:CDS | 50.0% |
| CATAACGCCAGAAGTGGAAG+TGG | + | chr3_2:72965929-72965948 | Msa0423200:CDS | 50.0% | |
| AGTAGCTTCGGTTGCTGAGA+TGG | + | chr3_2:72965965-72965984 | Msa0423200:CDS | 50.0% | |
| ATTTGCACTTGGCGCAGCTT+TGG | + | chr3_2:72966085-72966104 | Msa0423200:CDS | 50.0% | |
| AGCACCAAGCACGATGGTCA+TGG | - | chr3_2:72966046-72966065 | None:intergenic | 55.0% | |
| ACGGCCATGACCATCGTGCT+TGG | + | chr3_2:72966039-72966058 | Msa0423200:CDS | 60.0% | |
| ! | TGCACTTGGCGCAGCTTTGG+AGG | + | chr3_2:72966088-72966107 | Msa0423200:CDS | 60.0% |
| CAGCGCAGCACCAAGCACGA+TGG | - | chr3_2:72966052-72966071 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72965519 | 72966118 | 72965519 | ID=Msa0423200;Name=Msa0423200 |
| chr3_2 | mRNA | 72965519 | 72966118 | 72965519 | ID=Msa0423200-mRNA-1;Parent=Msa0423200;Name=Msa0423200-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|199 |
| chr3_2 | exon | 72965519 | 72966118 | 72965519 | ID=Msa0423200-mRNA-1:exon:18107;Parent=Msa0423200-mRNA-1 |
| chr3_2 | CDS | 72965519 | 72966118 | 72965519 | ID=Msa0423200-mRNA-1:cds;Parent=Msa0423200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
