Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825080 | XP_003617833.2 | 95.984 | 249 | 10 | 0 | 1 | 249 | 1 | 249 | 3.59e-180 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825080 | sp|F4K687|NMNAT_ARATH | 65.432 | 243 | 75 | 1 | 1 | 243 | 1 | 234 | 2.78e-118 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825080 | G7KEH1 | 95.984 | 249 | 10 | 0 | 1 | 249 | 1 | 249 | 1.71e-180 | 504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004920 | Msa0825080 | 0.812192 | 4.798075e-51 | -8.615850e-47 |
| Msa0011170 | Msa0825080 | 0.812769 | 3.588278e-51 | -8.615850e-47 |
| Msa0014710 | Msa0825080 | 0.813896 | 2.029393e-51 | -8.615850e-47 |
| Msa0020930 | Msa0825080 | 0.839866 | 1.225984e-57 | -8.615850e-47 |
| Msa0031340 | Msa0825080 | 0.805013 | 1.638142e-49 | -8.615850e-47 |
| Msa0032110 | Msa0825080 | 0.807222 | 5.616319e-50 | -8.615850e-47 |
| Msa0036140 | Msa0825080 | 0.824027 | 1.007924e-53 | -8.615850e-47 |
| Msa0043980 | Msa0825080 | 0.820113 | 8.142286e-53 | -8.615850e-47 |
| Msa0052730 | Msa0825080 | 0.808007 | 3.825887e-50 | -8.615850e-47 |
| Msa0068680 | Msa0825080 | 0.847907 | 8.592621e-60 | -8.615850e-47 |
| Msa0074700 | Msa0825080 | 0.806143 | 9.490908e-50 | -8.615850e-47 |
| Msa0083280 | Msa0825080 | 0.816546 | 5.229824e-52 | -8.615850e-47 |
| Msa0084080 | Msa0825080 | 0.802492 | 5.468261e-49 | -8.615850e-47 |
| Msa0095560 | Msa0825080 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
| Msa0114060 | Msa0825080 | 0.838193 | 3.326682e-57 | -8.615850e-47 |
| Msa0116080 | Msa0825080 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0119960 | Msa0825080 | 0.801466 | 8.886934e-49 | -8.615850e-47 |
| Msa0607050 | Msa0825080 | 0.825197 | 5.345789e-54 | -8.615850e-47 |
| Msa0610430 | Msa0825080 | 0.806672 | 7.340795e-50 | -8.615850e-47 |
| Msa0612960 | Msa0825080 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0621490 | Msa0825080 | 0.805754 | 1.145885e-49 | -8.615850e-47 |
| Msa0638070 | Msa0825080 | 0.803447 | 3.470661e-49 | -8.615850e-47 |
| Msa0657970 | Msa0825080 | 0.830576 | 2.716387e-55 | -8.615850e-47 |
| Msa0665780 | Msa0825080 | 0.811856 | 5.679152e-51 | -8.615850e-47 |
| Msa0673460 | Msa0825080 | 0.809696 | 1.665379e-50 | -8.615850e-47 |
| Msa0688070 | Msa0825080 | 0.802484 | 5.487908e-49 | -8.615850e-47 |
| Msa0690150 | Msa0825080 | 0.809757 | 1.616153e-50 | -8.615850e-47 |
| Msa0693380 | Msa0825080 | 0.822002 | 2.990209e-53 | -8.615850e-47 |
| Msa0693600 | Msa0825080 | 0.805786 | 1.128453e-49 | -8.615850e-47 |
| Msa0698400 | Msa0825080 | 0.802139 | 6.465815e-49 | -8.615850e-47 |
| Msa0731180 | Msa0825080 | 0.801079 | 1.066327e-48 | -8.615850e-47 |
| Msa0740510 | Msa0825080 | 0.846235 | 2.467181e-59 | -8.615850e-47 |
| Msa0740520 | Msa0825080 | 0.803617 | 3.199972e-49 | -8.615850e-47 |
| Msa0744040 | Msa0825080 | 0.823026 | 1.728912e-53 | -8.615850e-47 |
| Msa0745790 | Msa0825080 | 0.804466 | 2.131168e-49 | -8.615850e-47 |
| Msa0756540 | Msa0825080 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0779690 | Msa0825080 | 0.804763 | 1.848117e-49 | -8.615850e-47 |
| Msa0790510 | Msa0825080 | 0.806289 | 8.841772e-50 | -8.615850e-47 |
| Msa0795080 | Msa0825080 | 0.805738 | 1.154958e-49 | -8.615850e-47 |
| Msa0802010 | Msa0825080 | 0.812083 | 5.068246e-51 | -8.615850e-47 |
| Msa0816590 | Msa0825080 | 0.839914 | 1.191106e-57 | -8.615850e-47 |
| Msa0820770 | Msa0825080 | 0.855225 | 7.277131e-62 | -8.615850e-47 |
| Msa0820850 | Msa0825080 | 0.807942 | 3.950554e-50 | -8.615850e-47 |
| Msa0825080 | Msa0825340 | 0.808348 | 3.237771e-50 | -8.615850e-47 |
| Msa0825080 | Msa0832150 | 0.816064 | 6.704020e-52 | -8.615850e-47 |
| Msa0825080 | Msa0861090 | 0.850590 | 1.538892e-60 | -8.615850e-47 |
| Msa0825080 | Msa0861130 | 0.805656 | 1.201559e-49 | -8.615850e-47 |
| Msa0825080 | Msa0861920 | 0.806696 | 7.256494e-50 | -8.615850e-47 |
| Msa0825080 | Msa0866950 | 0.800206 | 1.606744e-48 | -8.615850e-47 |
| Msa0825080 | Msa0895120 | 0.825349 | 4.920451e-54 | -8.615850e-47 |
| Msa0825080 | Msa0910000 | 0.801626 | 8.240060e-49 | -8.615850e-47 |
| Msa0825080 | Msa0933230 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0825080 | Msa0993290 | 0.805061 | 1.601097e-49 | -8.615850e-47 |
| Msa0825080 | Msa0993600 | 0.804076 | 2.569654e-49 | -8.615850e-47 |
| Msa0825080 | Msa1014540 | 0.802644 | 5.088061e-49 | -8.615850e-47 |
| Msa0825080 | Msa1023920 | 0.812167 | 4.857973e-51 | -8.615850e-47 |
| Msa0825080 | Msa1029210 | 0.804493 | 2.103636e-49 | -8.615850e-47 |
| Msa0825080 | Msa1079590 | 0.801686 | 8.009302e-49 | -8.615850e-47 |
| Msa0825080 | Msa1082500 | 0.854457 | 1.215738e-61 | -8.615850e-47 |
| Msa0825080 | Msa1085200 | 0.803695 | 3.083743e-49 | -8.615850e-47 |
| Msa0825080 | Msa1107900 | 0.813225 | 2.850655e-51 | -8.615850e-47 |
| Msa0825080 | Msa1111180 | 0.803668 | 3.122965e-49 | -8.615850e-47 |
| Msa0825080 | Msa1124960 | 0.805042 | 1.615448e-49 | -8.615850e-47 |
| Msa0825080 | Msa1131220 | 0.815381 | 9.520583e-52 | -8.615850e-47 |
| Msa0825080 | Msa1147280 | 0.802387 | 5.748015e-49 | -8.615850e-47 |
| Msa0825080 | Msa1151720 | 0.816767 | 4.667510e-52 | -8.615850e-47 |
| Msa0825080 | Msa1159840 | 0.809967 | 1.456397e-50 | -8.615850e-47 |
| Msa0825080 | Msa1165520 | 0.803356 | 3.625125e-49 | -8.615850e-47 |
| Msa0825080 | Msa1170410 | 0.807969 | 3.897692e-50 | -8.615850e-47 |
| Msa0825080 | Msa1172670 | 0.805340 | 1.399493e-49 | -8.615850e-47 |
| Msa0825080 | Msa1174040 | 0.809455 | 1.875872e-50 | -8.615850e-47 |
| Msa0825080 | Msa1203250 | 0.812420 | 4.277431e-51 | -8.615850e-47 |
| Msa0825080 | Msa1204530 | 0.831312 | 1.792651e-55 | -8.615850e-47 |
| Msa0825080 | Msa1204630 | 0.806385 | 8.440467e-50 | -8.615850e-47 |
| Msa0825080 | Msa1224480 | 0.806234 | 9.082663e-50 | -8.615850e-47 |
| Msa0825080 | Msa1233890 | 0.807856 | 4.120301e-50 | -8.615850e-47 |
| Msa0825080 | Msa1267960 | 0.800309 | 1.531363e-48 | -8.615850e-47 |
| Msa0825080 | Msa1296760 | 0.816667 | 4.913544e-52 | -8.615850e-47 |
| Msa0825080 | Msa1306840 | 0.801344 | 9.412931e-49 | -8.615850e-47 |
| Msa0825080 | Msa1306850 | 0.806456 | 8.153046e-50 | -8.615850e-47 |
| Msa0825080 | Msa1314340 | 0.820431 | 6.884600e-53 | -8.615850e-47 |
| Msa0825080 | Msa1322890 | 0.803832 | 2.888008e-49 | -8.615850e-47 |
| Msa0825080 | Msa1327550 | 0.807428 | 5.079181e-50 | -8.615850e-47 |
| Msa0825080 | Msa1329700 | 0.805058 | 1.603326e-49 | -8.615850e-47 |
| Msa0825080 | Msa1331000 | 0.833114 | 6.420909e-56 | -8.615850e-47 |
| Msa0825080 | Msa1331320 | 0.812517 | 4.073791e-51 | -8.615850e-47 |
| Msa0825080 | Msa1340650 | 0.811610 | 6.422230e-51 | -8.615850e-47 |
| Msa0825080 | Msa1342900 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0825080 | Msa1353980 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0825080 | Msa1372760 | 0.810448 | 1.146964e-50 | -8.615850e-47 |
| Msa0825080 | Msa1374470 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa0825080 | Msa1384350 | 0.805822 | 1.108806e-49 | -8.615850e-47 |
| Msa0825080 | Msa1392260 | 0.833514 | 5.106203e-56 | -8.615850e-47 |
| Msa0825080 | Msa1397120 | 0.823821 | 1.127049e-53 | -8.615850e-47 |
| Msa0825080 | Msa1403890 | 0.822890 | 1.859068e-53 | -8.615850e-47 |
| Msa0825080 | Msa1411020 | 0.813983 | 1.941425e-51 | -8.615850e-47 |
| Msa0825080 | Msa1424290 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
| Msa0825080 | Msa1424450 | 0.811339 | 7.355683e-51 | -8.615850e-47 |
| Msa0825080 | Msa1425100 | 0.800446 | 1.435661e-48 | -8.615850e-47 |
| Msa0825080 | Msa1427230 | 0.827598 | 1.431789e-54 | -8.615850e-47 |
| Msa0825080 | Msa1429900 | 0.832354 | 9.918591e-56 | -8.615850e-47 |
| Msa0825080 | Msa1434350 | 0.811938 | 5.450326e-51 | -8.615850e-47 |
| Msa0825080 | Msa1439320 | 0.812165 | 4.864123e-51 | -8.615850e-47 |
| Msa0825080 | Msa1452240 | 0.802912 | 4.479691e-49 | -8.615850e-47 |
| Msa0825080 | Msa1460050 | 0.835132 | 2.004694e-56 | -8.615850e-47 |
| Msa0825080 | Msa1460830 | 0.837243 | 5.831304e-57 | -8.615850e-47 |
| Msa0825080 | Msa1464940 | 0.800444 | 1.436900e-48 | -8.615850e-47 |
| Msa0133130 | Msa0825080 | 0.802203 | 6.270823e-49 | -8.615850e-47 |
| Msa0159930 | Msa0825080 | 0.834362 | 3.131543e-56 | -8.615850e-47 |
| Msa0166870 | Msa0825080 | 0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa0170570 | Msa0825080 | 0.805013 | 1.638336e-49 | -8.615850e-47 |
| Msa0183050 | Msa0825080 | 0.801369 | 9.303874e-49 | -8.615850e-47 |
| Msa0188830 | Msa0825080 | 0.822636 | 2.130922e-53 | -8.615850e-47 |
| Msa0205510 | Msa0825080 | 0.815573 | 8.624778e-52 | -8.615850e-47 |
| Msa0206010 | Msa0825080 | 0.801777 | 7.673560e-49 | -8.615850e-47 |
| Msa0216240 | Msa0825080 | 0.835293 | 1.825958e-56 | -8.615850e-47 |
| Msa0217680 | Msa0825080 | 0.813146 | 2.967283e-51 | -8.615850e-47 |
| Msa0220580 | Msa0825080 | 0.829556 | 4.817468e-55 | -8.615850e-47 |
| Msa0223010 | Msa0825080 | 0.815109 | 1.094194e-51 | -8.615850e-47 |
| Msa0373450 | Msa0825080 | 0.807065 | 6.063285e-50 | -8.615850e-47 |
| Msa0373930 | Msa0825080 | 0.808098 | 3.659849e-50 | -8.615850e-47 |
| Msa0376350 | Msa0825080 | 0.812355 | 4.420757e-51 | -8.615850e-47 |
| Msa0376910 | Msa0825080 | 0.818998 | 1.462402e-52 | -8.615850e-47 |
| Msa0379640 | Msa0825080 | 0.829964 | 3.832414e-55 | -8.615850e-47 |
| Msa0392400 | Msa0825080 | 0.805790 | 1.125819e-49 | -8.615850e-47 |
| Msa0393080 | Msa0825080 | 0.804185 | 2.438471e-49 | -8.615850e-47 |
| Msa0395970 | Msa0825080 | 0.801601 | 8.336664e-49 | -8.615850e-47 |
| Msa0424790 | Msa0825080 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0428930 | Msa0825080 | 0.822078 | 2.871743e-53 | -8.615850e-47 |
| Msa0436760 | Msa0825080 | 0.807921 | 3.990151e-50 | -8.615850e-47 |
| Msa0440750 | Msa0825080 | 0.816220 | 6.186671e-52 | -8.615850e-47 |
| Msa0453350 | Msa0825080 | 0.805934 | 1.050251e-49 | -8.615850e-47 |
| Msa0471900 | Msa0825080 | 0.809008 | 2.338998e-50 | -8.615850e-47 |
| Msa0477080 | Msa0825080 | 0.807583 | 4.709602e-50 | -8.615850e-47 |
| Msa0477130 | Msa0825080 | -0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa0479970 | Msa0825080 | 0.817604 | 3.025167e-52 | -8.615850e-47 |
| Msa0242430 | Msa0825080 | 0.805423 | 1.344763e-49 | -8.615850e-47 |
| Msa0249200 | Msa0825080 | 0.800831 | 1.198601e-48 | -8.615850e-47 |
| Msa0280090 | Msa0825080 | 0.809255 | 2.070771e-50 | -8.615850e-47 |
| Msa0282250 | Msa0825080 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0287410 | Msa0825080 | 0.825702 | 4.058361e-54 | -8.615850e-47 |
| Msa0287650 | Msa0825080 | 0.802100 | 6.585304e-49 | -8.615850e-47 |
| Msa0302400 | Msa0825080 | 0.801925 | 7.153660e-49 | -8.615850e-47 |
| Msa0309770 | Msa0825080 | 0.812095 | 5.036300e-51 | -8.615850e-47 |
| Msa0334360 | Msa0825080 | 0.804190 | 2.432999e-49 | -8.615850e-47 |
| Msa0339620 | Msa0825080 | 0.828893 | 6.979168e-55 | -8.615850e-47 |
| Msa0345970 | Msa0825080 | 0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa0351380 | Msa0825080 | 0.801453 | 8.940840e-49 | -8.615850e-47 |
| Msa0484780 | Msa0825080 | 0.849453 | 3.203173e-60 | -8.615850e-47 |
| Msa0488560 | Msa0825080 | 0.808350 | 3.233308e-50 | -8.615850e-47 |
| Msa0493630 | Msa0825080 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
| Msa0507680 | Msa0825080 | 0.806091 | 9.731427e-50 | -8.615850e-47 |
| Msa0512900 | Msa0825080 | 0.821811 | 3.310302e-53 | -8.615850e-47 |
| Msa0516170 | Msa0825080 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0521430 | Msa0825080 | 0.813797 | 2.134050e-51 | -8.615850e-47 |
| Msa0532350 | Msa0825080 | 0.801085 | 1.063405e-48 | -8.615850e-47 |
| Msa0545210 | Msa0825080 | 0.818147 | 2.281219e-52 | -8.615850e-47 |
| Msa0558230 | Msa0825080 | 0.800413 | 1.458480e-48 | -8.615850e-47 |
| Msa0562440 | Msa0825080 | 0.802063 | 6.700402e-49 | -8.615850e-47 |
| Msa0563840 | Msa0825080 | 0.815811 | 7.635319e-52 | -8.615850e-47 |
| Msa0577500 | Msa0825080 | 0.802523 | 5.388336e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825080 | MtrunA17_Chr5g0446641 | 95.984 | 249 | 10 | 0 | 1 | 249 | 1 | 249 | 0.0 | 504 |
| Msa0825080 | MtrunA17_Chr3g0078751 | 95.918 | 196 | 8 | 0 | 1 | 196 | 1 | 196 | 2.73e-143 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825080 | AT5G55810.1 | 65.432 | 243 | 75 | 1 | 1 | 243 | 1 | 234 | 2.82e-119 | 340 |
| Msa0825080 | AT5G55810.2 | 50.186 | 269 | 99 | 4 | 1 | 243 | 1 | 260 | 2.18e-84 | 253 |
| Msa0825080 | AT5G55810.3 | 43.386 | 189 | 72 | 4 | 1 | 163 | 1 | 180 | 7.45e-39 | 134 |
Find 84 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGAATTCCTGGATTT+TGG | 0.129362 | 5_3:-64819088 | Msa0825080:CDS |
| CTCCATTCCTTTGGAATTCC+TGG | 0.134175 | 5_3:-64819095 | Msa0825080:CDS |
| TGCATTTAGCTTGTGAATTA+TGG | 0.159598 | 5_3:+64817857 | None:intergenic |
| CAACTAATGCTCCTTGTCTT+TGG | 0.220395 | 5_3:+64824603 | None:intergenic |
| TTGAGCAGCTGCTAATTATT+AGG | 0.241050 | 5_3:+64817790 | None:intergenic |
| TCCAAAGGCTACTGTGTAAT+TGG | 0.244502 | 5_3:-64821291 | Msa0825080:CDS |
| GATAAATAATTCCTACAAAT+TGG | 0.244754 | 5_3:-64817991 | Msa0825080:exon |
| AAGAGTATATGCAGAGATTA+TGG | 0.295544 | 5_3:-64818694 | Msa0825080:CDS |
| AACTAATGCTCCTTGTCTTT+GGG | 0.307405 | 5_3:+64824604 | None:intergenic |
| GTTGATGAATGAATGAGTTT+TGG | 0.319307 | 5_3:+64824626 | None:intergenic |
| CTTGTTGAGCTGATTTGATT+TGG | 0.320482 | 5_3:+64818225 | None:intergenic |
| TGGCAGGATTTATGTCATTC+TGG | 0.323590 | 5_3:-64822186 | Msa0825080:CDS |
| GTAAGCAGAAAGCCGGAGTA+TGG | 0.329817 | 5_3:+64825001 | None:intergenic |
| CAAGTATAATTTATGTTCTC+TGG | 0.334539 | 5_3:+64818023 | None:intergenic |
| TTCTCTCTCGGATTTGCAGC+GGG | 0.340020 | 5_3:-64822810 | Msa0825080:five_prime_UTR |
| ACATACTTGTTTGTGTTTCC+AGG | 0.341439 | 5_3:+64822295 | None:intergenic |
| GCATTAGTTGATTGATCAAT+TGG | 0.341671 | 5_3:-64824590 | Msa0825080:five_prime_UTR |
| GAATGATGCATACAAGAAAA+AGG | 0.360866 | 5_3:-64821250 | Msa0825080:intron |
| TGTTTAATAAACAGTTGATT+TGG | 0.360952 | 5_3:-64817910 | Msa0825080:three_prime_UTR |
| TCGAATACAATTATGTCATT+TGG | 0.369646 | 5_3:-64820555 | Msa0825080:CDS |
| TCTGATCTCCTCCATTCCTT+TGG | 0.381928 | 5_3:-64819104 | Msa0825080:CDS |
| TCCAATTACACAGTAGCCTT+TGG | 0.395774 | 5_3:+64821290 | None:intergenic |
| TATGTCATTCTGGTGGCAAC+TGG | 0.406785 | 5_3:-64822176 | Msa0825080:CDS |
| CAGAACCCTTCCTTCTCTCT+CGG | 0.409910 | 5_3:-64822822 | Msa0825080:five_prime_UTR |
| CTGAAGGTCATGCTTGTTTG+TGG | 0.414274 | 5_3:-64819128 | Msa0825080:CDS |
| CACACTTCTATTTGTGAGAC+AGG | 0.414912 | 5_3:-64820257 | Msa0825080:CDS |
| TGAATATTTGTAGCGATGAA+TGG | 0.416549 | 5_3:+64824670 | None:intergenic |
| GCATATGATATCCAATTTGT+AGG | 0.428886 | 5_3:+64817980 | None:intergenic |
| TAATATTCTGAATGAGAATC+AGG | 0.429306 | 5_3:-64818617 | Msa0825080:intron |
| CAAAAGTTCAGAATTTGTAA+TGG | 0.454517 | 5_3:-64820528 | Msa0825080:CDS |
| TTGTTTGTGTTTCCAGGGGA+GGG | 0.460251 | 5_3:+64822301 | None:intergenic |
| GAATATTTGTAGCGATGAAT+GGG | 0.461914 | 5_3:+64824671 | None:intergenic |
| TTCTTGTATGCATCATTCAC+AGG | 0.473491 | 5_3:+64821255 | None:intergenic |
| TTTATGCATTTACGCATGTT+CGG | 0.474301 | 5_3:-64822134 | Msa0825080:intron |
| TTTGGTGTTGTAAAACTAGC+AGG | 0.475184 | 5_3:-64817892 | Msa0825080:three_prime_UTR |
| CTTGTTTGTGTTTCCAGGGG+AGG | 0.479080 | 5_3:+64822300 | None:intergenic |
| ATTAGTAATGAACCCTCCCC+TGG | 0.489052 | 5_3:-64822313 | Msa0825080:CDS |
| AGCGATGAATGGGAACAATC+TGG | 0.495728 | 5_3:+64824681 | None:intergenic |
| CATACTTGTTTGTGTTTCCA+GGG | 0.499468 | 5_3:+64822296 | None:intergenic |
| ATCCAGGAATTCCAAAGGAA+TGG | 0.502597 | 5_3:+64819093 | None:intergenic |
| AAATCAGCTCAACAAGAGTA+AGG | 0.504095 | 5_3:-64818218 | Msa0825080:intron |
| TATGGATGTTCCTTTGCCGT+TGG | 0.505581 | 5_3:-64822356 | Msa0825080:CDS |
| AGATTTCTTACCGTTCTTGA+AGG | 0.506663 | 5_3:+64824513 | None:intergenic |
| ATTTGTAATGGTTGATCCAT+GGG | 0.506778 | 5_3:-64820516 | Msa0825080:CDS |
| AATTTGTAATGGTTGATCCA+TGG | 0.509741 | 5_3:-64820517 | Msa0825080:CDS |
| ATCAATTGGAACTAAAGATA+AGG | 0.513456 | 5_3:-64824576 | Msa0825080:five_prime_UTR |
| ATGCGTAAATGCATAAAAGT+AGG | 0.517451 | 5_3:+64822140 | None:intergenic |
| CAACGCATAAGTACCTGGTC+AGG | 0.528308 | 5_3:+64819062 | None:intergenic |
| CTCTCTCGGATTTGCAGCGG+GGG | 0.528495 | 5_3:-64822808 | Msa0825080:intron |
| AAAGGCTACTGTGTAATTGG+AGG | 0.533237 | 5_3:-64821288 | Msa0825080:CDS |
| ACAAATAGAAGTGTGGACTC+TGG | 0.543174 | 5_3:+64820265 | None:intergenic |
| TGGTCAGGAATCCAAAATCC+AGG | 0.547222 | 5_3:+64819077 | None:intergenic |
| AAAGAGTAGTGTACCTCCCA+TGG | 0.549198 | 5_3:+64820500 | None:intergenic |
| TGTAAATCTAATTTATCCAA+CGG | 0.549631 | 5_3:+64822340 | None:intergenic |
| AATGACATAATTGTATTCGA+TGG | 0.557636 | 5_3:+64820558 | None:intergenic |
| CTTCTCTCTCGGATTTGCAG+CGG | 0.562632 | 5_3:-64822811 | Msa0825080:five_prime_UTR |
| TAAGCAGAAAGCCGGAGTAT+GGG | 0.564266 | 5_3:+64825002 | None:intergenic |
| TGAAGCTGTAAGCAGAAAGC+CGG | 0.566467 | 5_3:+64824994 | None:intergenic |
| CGTAAATGCATAAAAGTAGG+AGG | 0.572929 | 5_3:+64822143 | None:intergenic |
| TTCAGGGAATGCATTGCAAG+AGG | 0.573672 | 5_3:-64818090 | Msa0825080:intron |
| TAGAAGTGTGGACTCTGGAT+AGG | 0.573771 | 5_3:+64820270 | None:intergenic |
| TCTCTCTCGGATTTGCAGCG+GGG | 0.579850 | 5_3:-64822809 | Msa0825080:five_prime_UTR |
| CGCTGCAAATCCGAGAGAGA+AGG | 0.580941 | 5_3:+64822812 | None:intergenic |
| TCTAATTTATCCAACGGCAA+AGG | 0.595678 | 5_3:+64822346 | None:intergenic |
| GTAGTCTGCATACGCAGAGA+AGG | 0.611006 | 5_3:-64818670 | Msa0825080:CDS |
| CAGGAATTCCAAAGGAATGG+AGG | 0.618739 | 5_3:+64819096 | None:intergenic |
| TGTAACTAATGACTCTTGCA+TGG | 0.620569 | 5_3:+64817949 | None:intergenic |
| AGAGATGCGTTGAATTCCAA+AGG | 0.627625 | 5_3:-64821306 | Msa0825080:CDS |
| CCAAAATCCAGGAATTCCAA+AGG | 0.627941 | 5_3:+64819088 | None:intergenic |
| CATTAGTGTAGAATCTCTGA+AGG | 0.629493 | 5_3:-64819144 | Msa0825080:intron |
| CGGGTACGTGACCCATACTC+CGG | 0.631151 | 5_3:-64825013 | None:intergenic |
| CATTCATCAACCCAAAGACA+AGG | 0.631623 | 5_3:-64824614 | Msa0825080:five_prime_UTR |
| AAGGCTACTGTGTAATTGGA+GGG | 0.631668 | 5_3:-64821287 | Msa0825080:CDS |
| ATAGGACAGTCAAAGTGCGT+TGG | 0.633138 | 5_3:+64820288 | None:intergenic |
| GAGACAGGGTTGATATCTAG+AGG | 0.637148 | 5_3:-64820242 | Msa0825080:intron |
| GCAAATCCGAGAGAGAAGGA+AGG | 0.638291 | 5_3:+64822816 | None:intergenic |
| ATACTTGTTTGTGTTTCCAG+GGG | 0.642927 | 5_3:+64822297 | None:intergenic |
| ACACTTCTATTTGTGAGACA+GGG | 0.644435 | 5_3:-64820256 | Msa0825080:CDS |
| CAAATCCGAGAGAGAAGGAA+GGG | 0.644850 | 5_3:+64822817 | None:intergenic |
| CAGGATTTATGTCATTCTGG+TGG | 0.646475 | 5_3:-64822183 | Msa0825080:CDS |
| TGTAATGGTTGATCCATGGG+AGG | 0.658001 | 5_3:-64820513 | Msa0825080:intron |
| CTGTCTCACAAATAGAAGTG+TGG | 0.660331 | 5_3:+64820258 | None:intergenic |
| ATAATCAATCACTTCATCTG+CGG | 0.664620 | 5_3:+64818047 | None:intergenic |
| AACGGCGGCAGTGACGACGA+CGG | 0.716193 | 5_3:+64824548 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTTATTAATAAAA+AGG | - | chr5_3:64823775-64823794 | Msa0825080:intron | 0.0% |
| !! | TAAACAAAACTAAATAATAA+AGG | + | chr5_3:64820535-64820554 | None:intergenic | 10.0% |
| !! | AGAAATAAAACATTTATTTA+GGG | + | chr5_3:64822830-64822849 | None:intergenic | 10.0% |
| !! | AATATAAAATGACAAAATTA+TGG | + | chr5_3:64824075-64824094 | None:intergenic | 10.0% |
| !!! | TTTTATGAAATAGAGTTTTA+AGG | - | chr5_3:64818328-64818347 | Msa0825080:intron | 15.0% |
| !!! | TTTTTTCTTATTCTTTCTTT+TGG | - | chr5_3:64818530-64818549 | Msa0825080:intron | 15.0% |
| !! | TATTATTGAAAACATTAACA+AGG | + | chr5_3:64818837-64818856 | None:intergenic | 15.0% |
| !! | TTGTTAAATTTGAATATGTT+TGG | + | chr5_3:64819839-64819858 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAAATGAAAGT+AGG | + | chr5_3:64820101-64820120 | None:intergenic | 15.0% |
| !!! | ATTGTTTTCATATAAGTTAT+AGG | - | chr5_3:64820240-64820259 | Msa0825080:intron | 15.0% |
| !! | ATATGGTATAATATTGAATT+TGG | + | chr5_3:64821164-64821183 | None:intergenic | 15.0% |
| !! | TAAGAACATCAAATAATTAT+GGG | - | chr5_3:64821657-64821676 | Msa0825080:intron | 15.0% |
| !!! | TTAAATTATATTTTTCTGCT+TGG | - | chr5_3:64821767-64821786 | Msa0825080:intron | 15.0% |
| !!! | AATCAAACTTTTATTTAGAA+TGG | - | chr5_3:64821964-64821983 | Msa0825080:intron | 15.0% |
| !!! | CACTTAATAACTTATTTTTT+GGG | + | chr5_3:64822060-64822079 | None:intergenic | 15.0% |
| !! | CAGAAATAAAACATTTATTT+AGG | + | chr5_3:64822831-64822850 | None:intergenic | 15.0% |
| !! | TATTGTAATGACATATAATT+TGG | + | chr5_3:64823000-64823019 | None:intergenic | 15.0% |
| !! | TATATGTCATTACAATATTA+AGG | - | chr5_3:64823003-64823022 | Msa0825080:intron | 15.0% |
| !! | ATAAAGTAATAAATAGTAAG+GGG | + | chr5_3:64823057-64823076 | None:intergenic | 15.0% |
| !! | GATAAAGTAATAAATAGTAA+GGG | + | chr5_3:64823058-64823077 | None:intergenic | 15.0% |
| !! | AGATAAAGTAATAAATAGTA+AGG | + | chr5_3:64823059-64823078 | None:intergenic | 15.0% |
| !!! | TTTTCCATACAAATAATAAA+AGG | - | chr5_3:64823102-64823121 | Msa0825080:intron | 15.0% |
| !!! | ATATCCTTTTATTATTTGTA+TGG | + | chr5_3:64823109-64823128 | None:intergenic | 15.0% |
| !! | TAATTATACAGATAATACTA+GGG | + | chr5_3:64823417-64823436 | None:intergenic | 15.0% |
| !!! | TATCTGTATAATTAGTTTTA+TGG | - | chr5_3:64823423-64823442 | Msa0825080:intron | 15.0% |
| !!! | ATCTGTATAATTAGTTTTAT+GGG | - | chr5_3:64823424-64823443 | Msa0825080:intron | 15.0% |
| !!! | TCATTTTATATTTTTACTCT+AGG | - | chr5_3:64824083-64824102 | Msa0825080:intron | 15.0% |
| !!! | TTCATAAAACTCTAAGAAAT+AGG | + | chr5_3:64818317-64818336 | None:intergenic | 20.0% |
| !! | TGTTTAATCTCAATGAAATT+AGG | + | chr5_3:64818671-64818690 | None:intergenic | 20.0% |
| !!! | CCAAAACAAAGAATTTTTTT+AGG | + | chr5_3:64818748-64818767 | None:intergenic | 20.0% |
| !!! | CCTAAAAAAATTCTTTGTTT+TGG | - | chr5_3:64818745-64818764 | Msa0825080:intron | 20.0% |
| !!! | ATTGTTGTGATCAAATTTTA+TGG | + | chr5_3:64819318-64819337 | None:intergenic | 20.0% |
| !! | ATAAAATTTGATCACAACAA+TGG | - | chr5_3:64819317-64819336 | Msa0825080:intron | 20.0% |
| !! | TCAAAAAAAAAAAAAAAGCG+AGG | - | chr5_3:64819598-64819617 | Msa0825080:intron | 20.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | - | chr5_3:64820297-64820316 | Msa0825080:CDS | 20.0% |
| !! | GTATTATAAGTCAAACTATT+TGG | + | chr5_3:64820353-64820372 | None:intergenic | 20.0% |
| !!! | TTTCTAATGATTTTAGGTTA+TGG | - | chr5_3:64820428-64820447 | Msa0825080:intron | 20.0% |
| !! | TGTAAATCTAATTTATCCAA+CGG | + | chr5_3:64820465-64820484 | None:intergenic | 20.0% |
| !!! | CTGAATGTTTTTTATCTATA+TGG | + | chr5_3:64821181-64821200 | None:intergenic | 20.0% |
| !!! | ATGAAGTTGGTAATAAATAA+AGG | + | chr5_3:64821291-64821310 | None:intergenic | 20.0% |
| !! | AGAATGAATATGATAGAATA+AGG | + | chr5_3:64821620-64821639 | None:intergenic | 20.0% |
| !! | GTAAGAACATCAAATAATTA+TGG | - | chr5_3:64821656-64821675 | Msa0825080:intron | 20.0% |
| !! | CTAAATAAAAGTTTGATTAC+AGG | + | chr5_3:64821962-64821981 | None:intergenic | 20.0% |
| !!! | CCACTTAATAACTTATTTTT+TGG | + | chr5_3:64822061-64822080 | None:intergenic | 20.0% |
| !! | CCAAAAAATAAGTTATTAAG+TGG | - | chr5_3:64822058-64822077 | Msa0825080:intron | 20.0% |
| !! | TTTATAGTATTGCTTGATAT+AGG | + | chr5_3:64822155-64822174 | None:intergenic | 20.0% |
| !! | TATAACCACATAAAAATGAA+AGG | + | chr5_3:64822466-64822485 | None:intergenic | 20.0% |
| !! | ATAAAACATTTATTTAGGGA+TGG | + | chr5_3:64822826-64822845 | None:intergenic | 20.0% |
| !! | TGAAAGATGTCTTATAAAAA+GGG | + | chr5_3:64822912-64822931 | None:intergenic | 20.0% |
| !! | TTGAAAGATGTCTTATAAAA+AGG | + | chr5_3:64822913-64822932 | None:intergenic | 20.0% |
| !!! | TAATTTGGACAAATGAATTT+TGG | + | chr5_3:64822985-64823004 | None:intergenic | 20.0% |
| !!! | TTTTCAATATATATTTAGGG+AGG | - | chr5_3:64823327-64823346 | Msa0825080:intron | 20.0% |
| !! | TTTCAATATATATTTAGGGA+GGG | - | chr5_3:64823328-64823347 | Msa0825080:intron | 20.0% |
| !! | CTAATTATACAGATAATACT+AGG | + | chr5_3:64823418-64823437 | None:intergenic | 20.0% |
| !!! | TCTGTATAATTAGTTTTATG+GGG | - | chr5_3:64823425-64823444 | Msa0825080:intron | 20.0% |
| !! | TTTAAATTTGCATAAAAGCA+TGG | + | chr5_3:64824503-64824522 | None:intergenic | 20.0% |
| !!! | TTGCACTACATTTTTTTTTT+AGG | - | chr5_3:64824525-64824544 | Msa0825080:five_prime_UTR | 20.0% |
| !! | CTTATAAAGTAAACAAAACA+AGG | + | chr5_3:64824624-64824643 | None:intergenic | 20.0% |
| !! | ACTTTATAAGAGATAAATCA+TGG | - | chr5_3:64824634-64824653 | Msa0825080:five_prime_UTR | 20.0% |
| !!! | TGCTTTTATTACTAATTTCA+GGG | - | chr5_3:64824696-64824715 | Msa0825080:intron | 20.0% |
| !! | GATAAATAATTCCTACAAAT+TGG | - | chr5_3:64824811-64824830 | Msa0825080:intron | 20.0% |
| !! | TGTTTAATAAACAGTTGATT+TGG | - | chr5_3:64824892-64824911 | Msa0825080:intron | 20.0% |
| !! | CTTATAGCTTTTCGATTTAT+GGG | - | chr5_3:64817846-64817865 | Msa0825080:three_prime_UTR | 25.0% |
| ! | TAACTTCTGCTTATAGAATT+TGG | - | chr5_3:64817936-64817955 | Msa0825080:three_prime_UTR | 25.0% |
| !! | TTGATGAATGAATGAGTTTT+GGG | + | chr5_3:64818178-64818197 | None:intergenic | 25.0% |
| ! | ATCAATTGGAACTAAAGATA+AGG | - | chr5_3:64818226-64818245 | Msa0825080:CDS | 25.0% |
| ! | TAGCTGAACTAAATAAACTA+AGG | - | chr5_3:64818401-64818420 | Msa0825080:intron | 25.0% |
| ! | AGCTGAACTAAATAAACTAA+GGG | - | chr5_3:64818402-64818421 | Msa0825080:intron | 25.0% |
| !! | AGCTAGAGAAATTTTTATGA+GGG | + | chr5_3:64818773-64818792 | None:intergenic | 25.0% |
| !! | AAGCTAGAGAAATTTTTATG+AGG | + | chr5_3:64818774-64818793 | None:intergenic | 25.0% |
| ! | TTGAAAACATTAACAAGGAA+CGG | + | chr5_3:64818832-64818851 | None:intergenic | 25.0% |
| ! | TTACTATTATATCACAACAG+TGG | - | chr5_3:64819291-64819310 | Msa0825080:intron | 25.0% |
| ! | TCTTCATTTATTCTTGTCAA+AGG | - | chr5_3:64819366-64819385 | Msa0825080:intron | 25.0% |
| ! | CTTCATTTATTCTTGTCAAA+GGG | - | chr5_3:64819367-64819386 | Msa0825080:intron | 25.0% |
| ! | ATATATTATGTCCTGTACTT+AGG | - | chr5_3:64820154-64820173 | Msa0825080:intron | 25.0% |
| !!! | CTTATTTTCATAAGTTCTCA+AGG | + | chr5_3:64820283-64820302 | None:intergenic | 25.0% |
| !!! | CTTGTGTTTCTAATGATTTT+AGG | - | chr5_3:64820422-64820441 | Msa0825080:intron | 25.0% |
| !!! | TAGTTTTGTTTAATTGTGTG+AGG | - | chr5_3:64820543-64820562 | Msa0825080:CDS | 25.0% |
| !!! | AGTTTTGTTTAATTGTGTGA+GGG | - | chr5_3:64820544-64820563 | Msa0825080:CDS | 25.0% |
| ! | ATCAAGAGTGAAATTGTTAT+TGG | - | chr5_3:64820936-64820955 | Msa0825080:intron | 25.0% |
| ! | GTAAATGGTAAATGATTATC+AGG | + | chr5_3:64820981-64821000 | None:intergenic | 25.0% |
| ! | TAATCATTTACCATTTACAG+TGG | - | chr5_3:64820983-64821002 | Msa0825080:intron | 25.0% |
| ! | TTACCAACTTCATTAAGTTA+TGG | - | chr5_3:64821298-64821317 | Msa0825080:CDS | 25.0% |
| !! | AAATTGAATATTGAAGCACT+TGG | + | chr5_3:64821433-64821452 | None:intergenic | 25.0% |
| ! | AGAATAAGGATGATAGAATA+AGG | + | chr5_3:64821606-64821625 | None:intergenic | 25.0% |
| ! | ATCATATTCATTCTTGTATC+CGG | - | chr5_3:64821626-64821645 | Msa0825080:intron | 25.0% |
| ! | ACAAATGACATCTTAGAATT+TGG | + | chr5_3:64821809-64821828 | None:intergenic | 25.0% |
| ! | TTTGATTACAGGACAAAATT+GGG | + | chr5_3:64821951-64821970 | None:intergenic | 25.0% |
| !!! | CAAACTTTTATTTAGAATGG+AGG | - | chr5_3:64821967-64821986 | Msa0825080:intron | 25.0% |
| !!! | AACTTATTTTTTGGGATAGT+TGG | + | chr5_3:64822052-64822071 | None:intergenic | 25.0% |
| ! | GAAAGTCGATTAGAAAAAAA+CGG | + | chr5_3:64822189-64822208 | None:intergenic | 25.0% |
| ! | AATGACATAATTGTATTCGA+TGG | + | chr5_3:64822247-64822266 | None:intergenic | 25.0% |
| ! | TCGAATACAATTATGTCATT+TGG | - | chr5_3:64822247-64822266 | Msa0825080:intron | 25.0% |
| ! | CAAAAGTTCAGAATTTGTAA+TGG | - | chr5_3:64822274-64822293 | Msa0825080:intron | 25.0% |
| !!! | TTTTTTACATGCGAAAAGAA+TGG | + | chr5_3:64822357-64822376 | None:intergenic | 25.0% |
| ! | CTTCAATATTGAAACAATTG+AGG | - | chr5_3:64822377-64822396 | Msa0825080:intron | 25.0% |
| ! | AAAATGAAAGGTAAGAAATC+AGG | + | chr5_3:64822454-64822473 | None:intergenic | 25.0% |
| !!! | TCTTACCTTTCATTTTTATG+TGG | - | chr5_3:64822458-64822477 | Msa0825080:intron | 25.0% |
| ! | ATGTGGTTATAAATTACTAC+AGG | - | chr5_3:64822475-64822494 | Msa0825080:intron | 25.0% |
| !!! | CTGGTTTTTAAATTAGAATG+GGG | + | chr5_3:64822653-64822672 | None:intergenic | 25.0% |
| !!! | CCTGGTTTTTAAATTAGAAT+GGG | + | chr5_3:64822654-64822673 | None:intergenic | 25.0% |
| ! | CCATTCTAATTTAAAAACCA+GGG | - | chr5_3:64822652-64822671 | Msa0825080:intron | 25.0% |
| ! | TAAAAAGAGATTAAGAAAGC+CGG | + | chr5_3:64822690-64822709 | None:intergenic | 25.0% |
| ! | TAGAATGACATAATTTGGAA+CGG | + | chr5_3:64822962-64822981 | None:intergenic | 25.0% |
| ! | TTTGGTAGAATGACATAATT+TGG | + | chr5_3:64822967-64822986 | None:intergenic | 25.0% |
| ! | GTAACTAATGTTGTATAGAA+AGG | + | chr5_3:64823156-64823175 | None:intergenic | 25.0% |
| ! | ATTGCTAAAGTGACATAATT+TGG | - | chr5_3:64823195-64823214 | Msa0825080:intron | 25.0% |
| ! | TAAAGTGACATAATTTGGAA+CGG | - | chr5_3:64823200-64823219 | Msa0825080:intron | 25.0% |
| ! | TTTCTACAACATGTAATTTC+AGG | - | chr5_3:64823268-64823287 | Msa0825080:intron | 25.0% |
| ! | TTCTACAACATGTAATTTCA+GGG | - | chr5_3:64823269-64823288 | Msa0825080:intron | 25.0% |
| ! | GTAATTTCAGGGAATATAAT+TGG | - | chr5_3:64823280-64823299 | Msa0825080:intron | 25.0% |
| ! | TTCAATATATATTTAGGGAG+GGG | - | chr5_3:64823329-64823348 | Msa0825080:intron | 25.0% |
| !!! | TAGTATGTGTTTTAACTTCA+GGG | - | chr5_3:64823353-64823372 | Msa0825080:intron | 25.0% |
| !!! | CTGTATAATTAGTTTTATGG+GGG | - | chr5_3:64823426-64823445 | Msa0825080:intron | 25.0% |
| ! | ATCGTTTATATTTAGATCTG+AGG | - | chr5_3:64823831-64823850 | Msa0825080:intron | 25.0% |
| !!! | ATGGACTATAATTTTGTCAT+TGG | - | chr5_3:64824033-64824052 | Msa0825080:intron | 25.0% |
| !!! | TATAATTTTGTCATTGGTTG+TGG | - | chr5_3:64824039-64824058 | Msa0825080:intron | 25.0% |
| ! | TAATATTCTGAATGAGAATC+AGG | - | chr5_3:64824185-64824204 | Msa0825080:intron | 25.0% |
| ! | AATCGAAGGATTAAAATTGA+TGG | - | chr5_3:64824398-64824417 | Msa0825080:intron | 25.0% |
| !!! | CTGCTTTTATTACTAATTTC+AGG | - | chr5_3:64824695-64824714 | Msa0825080:intron | 25.0% |
| ! | CAAGTATAATTTATGTTCTC+TGG | + | chr5_3:64824782-64824801 | None:intergenic | 25.0% |
| !! | TTGTTGAAGTTGTATGTTTT+CGG | - | chr5_3:64824981-64825000 | Msa0825080:five_prime_UTR | 25.0% |
| ! | GCTTATAGCTTTTCGATTTA+TGG | - | chr5_3:64817845-64817864 | Msa0825080:three_prime_UTR | 30.0% |
| GAATATTTGTAGCGATGAAT+GGG | + | chr5_3:64818134-64818153 | None:intergenic | 30.0% | |
| TGAATATTTGTAGCGATGAA+TGG | + | chr5_3:64818135-64818154 | None:intergenic | 30.0% | |
| !!! | GTTTTGGGTTGATTAATTGA+AGG | + | chr5_3:64818163-64818182 | None:intergenic | 30.0% |
| !! | GTTGATGAATGAATGAGTTT+TGG | + | chr5_3:64818179-64818198 | None:intergenic | 30.0% |
| GCATTAGTTGATTGATCAAT+TGG | - | chr5_3:64818212-64818231 | Msa0825080:intron | 30.0% | |
| GCTGAACTAAATAAACTAAG+GGG | - | chr5_3:64818403-64818422 | Msa0825080:intron | 30.0% | |
| ACTAAATAAACTAAGGGGTT+TGG | - | chr5_3:64818408-64818427 | Msa0825080:intron | 30.0% | |
| CTAAATAAACTAAGGGGTTT+GGG | - | chr5_3:64818409-64818428 | Msa0825080:intron | 30.0% | |
| TAGCTGAACAAAATAAAACC+AGG | - | chr5_3:64818448-64818467 | Msa0825080:intron | 30.0% | |
| !!! | CTTTTTCAACGTAGACAAAT+AGG | + | chr5_3:64818593-64818612 | None:intergenic | 30.0% |
| ! | CTAGAGAAATTTTTATGAGG+GGG | + | chr5_3:64818771-64818790 | None:intergenic | 30.0% |
| ! | GCTAGAGAAATTTTTATGAG+GGG | + | chr5_3:64818772-64818791 | None:intergenic | 30.0% |
| CTAGCAACTTATATTCAGTT+CGG | - | chr5_3:64818892-64818911 | Msa0825080:intron | 30.0% | |
| TAGATGGTTAATTATTGCTG+TGG | + | chr5_3:64818946-64818965 | None:intergenic | 30.0% | |
| CAGCAATAATTAACCATCTA+TGG | - | chr5_3:64818946-64818965 | Msa0825080:intron | 30.0% | |
| CGTAAAACTGACAATGTAAA+TGG | + | chr5_3:64819064-64819083 | None:intergenic | 30.0% | |
| TGTGGTATAGTGAGAAAAAA+AGG | + | chr5_3:64819104-64819123 | None:intergenic | 30.0% | |
| ! | AGTAAAGTTGACACTTGTTA+AGG | - | chr5_3:64819141-64819160 | Msa0825080:intron | 30.0% |
| TAATACAGACCAGAAGAATT+TGG | - | chr5_3:64819232-64819251 | Msa0825080:intron | 30.0% | |
| !! | AGCATCCTAAGAATTGATTT+TGG | - | chr5_3:64819733-64819752 | Msa0825080:intron | 30.0% |
| TTTGGCCAAAATCAATTCTT+AGG | + | chr5_3:64819741-64819760 | None:intergenic | 30.0% | |
| TTCAGCTAGAATTGAGTTTA+AGG | - | chr5_3:64819787-64819806 | Msa0825080:intron | 30.0% | |
| ! | ATATTTTGTGACAATCAGTC+AGG | + | chr5_3:64820138-64820157 | None:intergenic | 30.0% |
| AAACTATTTGGAAGAGCTTA+TGG | + | chr5_3:64820341-64820360 | None:intergenic | 30.0% | |
| ATGCGTAAATGCATAAAAGT+AGG | + | chr5_3:64820665-64820684 | None:intergenic | 30.0% | |
| TTTATGCATTTACGCATGTT+CGG | - | chr5_3:64820668-64820687 | Msa0825080:intron | 30.0% | |
| CTTAATTCCACAACACTTAA+AGG | + | chr5_3:64820877-64820896 | None:intergenic | 30.0% | |
| ! | TTAAGTGTTGTGGAATTAAG+AGG | - | chr5_3:64820877-64820896 | Msa0825080:intron | 30.0% |
| ! | TAAGTGTTGTGGAATTAAGA+GGG | - | chr5_3:64820878-64820897 | Msa0825080:intron | 30.0% |
| TTAAGCGAGAATTTGAGTAT+TGG | + | chr5_3:64821036-64821055 | None:intergenic | 30.0% | |
| TGCATAGAGTAGTTTATTCA+AGG | + | chr5_3:64821130-64821149 | None:intergenic | 30.0% | |
| !!! | TTGGACAGTTATTTTTGCAT+AGG | - | chr5_3:64821251-64821270 | Msa0825080:CDS | 30.0% |
| !!! | TTATTTTTGCATAGGATCTG+TGG | - | chr5_3:64821259-64821278 | Msa0825080:CDS | 30.0% |
| AGACCATAACTTAATGAAGT+TGG | + | chr5_3:64821304-64821323 | None:intergenic | 30.0% | |
| GAATGATGCATACAAGAAAA+AGG | - | chr5_3:64821552-64821571 | Msa0825080:intron | 30.0% | |
| ! | TGATGTTCTTACAAGTTTTC+CGG | + | chr5_3:64821648-64821667 | None:intergenic | 30.0% |
| ATTATGGGAAAATACATGCT+TGG | - | chr5_3:64821672-64821691 | Msa0825080:intron | 30.0% | |
| GTCAAAAGAGTTAGGTTATT+AGG | - | chr5_3:64821841-64821860 | Msa0825080:intron | 30.0% | |
| GTTTGATTACAGGACAAAAT+TGG | + | chr5_3:64821952-64821971 | None:intergenic | 30.0% | |
| ! | TACAAATTCTGAACTTTTGC+AGG | + | chr5_3:64822273-64822292 | None:intergenic | 30.0% |
| AATTTGTAATGGTTGATCCA+TGG | - | chr5_3:64822285-64822304 | Msa0825080:intron | 30.0% | |
| ATTTGTAATGGTTGATCCAT+GGG | - | chr5_3:64822286-64822305 | Msa0825080:intron | 30.0% | |
| ! | GTCTAATTTCCTTTTCAGAA+TGG | - | chr5_3:64822620-64822639 | Msa0825080:intron | 30.0% |
| TTTAAATTAGAATGGGGAAG+AGG | + | chr5_3:64822647-64822666 | None:intergenic | 30.0% | |
| CCCATTCTAATTTAAAAACC+AGG | - | chr5_3:64822651-64822670 | Msa0825080:intron | 30.0% | |
| !! | CCCTGGTTTTTAAATTAGAA+TGG | + | chr5_3:64822655-64822674 | None:intergenic | 30.0% |
| CTGAATCCATCCTTAAATAT+AGG | - | chr5_3:64822863-64822882 | Msa0825080:intron | 30.0% | |
| AGGGACAATGAAATATATCA+GGG | + | chr5_3:64822893-64822912 | None:intergenic | 30.0% | |
| AAGGGACAATGAAATATATC+AGG | + | chr5_3:64822894-64822913 | None:intergenic | 30.0% | |
| ! | TAAATAGTAAGGGGCATAAT+AGG | + | chr5_3:64823048-64823067 | None:intergenic | 30.0% |
| AATTGGTTGTATGTTGAACT+TGG | - | chr5_3:64823297-64823316 | Msa0825080:intron | 30.0% | |
| TCAATATATATTTAGGGAGG+GGG | - | chr5_3:64823330-64823349 | Msa0825080:intron | 30.0% | |
| !!! | GTAGTATGTGTTTTAACTTC+AGG | - | chr5_3:64823352-64823371 | Msa0825080:intron | 30.0% |
| ATCTTCTGACACTAAACATA+CGG | + | chr5_3:64823508-64823527 | None:intergenic | 30.0% | |
| !! | ATCTGCATGGTTAATTTGTT+AGG | - | chr5_3:64823919-64823938 | Msa0825080:intron | 30.0% |
| TTCTTCTTCCAACATATATG+AGG | - | chr5_3:64823948-64823967 | Msa0825080:intron | 30.0% | |
| ! | AAGAGTATATGCAGAGATTA+TGG | - | chr5_3:64824108-64824127 | Msa0825080:intron | 30.0% |
| AAGATATGGCAATTCTTGAA+AGG | + | chr5_3:64824218-64824237 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGACGAGTGAAATG+TGG | - | chr5_3:64824270-64824289 | Msa0825080:intron | 30.0% |
| !!! | TCTTGTTTTTGACCACATTA+AGG | - | chr5_3:64824312-64824331 | Msa0825080:intron | 30.0% |
| CCATATTTCATAACCAATCA+CGG | + | chr5_3:64824457-64824476 | None:intergenic | 30.0% | |
| AATCATGGTGATTTAACAGA+AGG | - | chr5_3:64824649-64824668 | Msa0825080:five_prime_UTR | 30.0% | |
| ATCATGGTGATTTAACAGAA+GGG | - | chr5_3:64824650-64824669 | Msa0825080:five_prime_UTR | 30.0% | |
| ATAATCAATCACTTCATCTG+CGG | + | chr5_3:64824758-64824777 | None:intergenic | 30.0% | |
| GCATATGATATCCAATTTGT+AGG | + | chr5_3:64824825-64824844 | None:intergenic | 30.0% | |
| !! | TGCATTTAGCTTGTGAATTA+TGG | + | chr5_3:64824948-64824967 | None:intergenic | 30.0% |
| TTCCTTACTGCTTATGCTTA+TGG | - | chr5_3:64818019-64818038 | Msa0825080:CDS | 35.0% | |
| TCCTTACTGCTTATGCTTAT+GGG | - | chr5_3:64818020-64818039 | Msa0825080:CDS | 35.0% | |
| AACTAATGCTCCTTGTCTTT+GGG | + | chr5_3:64818201-64818220 | None:intergenic | 35.0% | |
| TGAAGGACAAAAAGAGACAA+CGG | + | chr5_3:64818275-64818294 | None:intergenic | 35.0% | |
| ! | CTCTTTTTGTCCTTCAAGAA+CGG | - | chr5_3:64818279-64818298 | Msa0825080:intron | 35.0% |
| AGATTTCTTACCGTTCTTGA+AGG | + | chr5_3:64818292-64818311 | None:intergenic | 35.0% | |
| ACAACAATAGTGTCAGTAGT+TGG | - | chr5_3:64818490-64818509 | Msa0825080:intron | 35.0% | |
| !! | CAATGAAATTAGGCTTTGAG+AGG | + | chr5_3:64818661-64818680 | None:intergenic | 35.0% |
| CGAACTGAATATAAGTTGCT+AGG | + | chr5_3:64818894-64818913 | None:intergenic | 35.0% | |
| ! | TAGAGTTTTTCACGTAACTG+TGG | + | chr5_3:64819122-64819141 | None:intergenic | 35.0% |
| !! | TGAGTGTTGTCTCAAAGTTT+TGG | + | chr5_3:64819168-64819187 | None:intergenic | 35.0% |
| !! | AAAACTTTGAGACAACACTC+AGG | - | chr5_3:64819167-64819186 | Msa0825080:intron | 35.0% |
| !! | AAACTTTGAGACAACACTCA+GGG | - | chr5_3:64819168-64819187 | Msa0825080:intron | 35.0% |
| GGTGTATTAGAAGAGAAAGT+AGG | - | chr5_3:64819189-64819208 | Msa0825080:intron | 35.0% | |
| AAAGAGACTCCAAATTCTTC+TGG | + | chr5_3:64819244-64819263 | None:intergenic | 35.0% | |
| TTCTCAAGGTTAGAGAAGAT+AGG | + | chr5_3:64819640-64819659 | None:intergenic | 35.0% | |
| TCTCTAACCTTGAGAAATTG+AGG | - | chr5_3:64819644-64819663 | Msa0825080:intron | 35.0% | |
| ACAGAAACCTCAATTTCTCA+AGG | + | chr5_3:64819654-64819673 | None:intergenic | 35.0% | |
| GTAACAAAAGCAACAGCAAT+TGG | - | chr5_3:64819672-64819691 | Msa0825080:intron | 35.0% | |
| TCTAATTTATCCAACGGCAA+AGG | + | chr5_3:64820459-64820478 | None:intergenic | 35.0% | |
| ATACTTGTTTGTGTTTCCAG+GGG | + | chr5_3:64820508-64820527 | None:intergenic | 35.0% | |
| CATACTTGTTTGTGTTTCCA+GGG | + | chr5_3:64820509-64820528 | None:intergenic | 35.0% | |
| ACATACTTGTTTGTGTTTCC+AGG | + | chr5_3:64820510-64820529 | None:intergenic | 35.0% | |
| CGTAAATGCATAAAAGTAGG+AGG | + | chr5_3:64820662-64820681 | None:intergenic | 35.0% | |
| !! | TTTTCTGCCTTTAAGTGTTG+TGG | - | chr5_3:64820867-64820886 | Msa0825080:intron | 35.0% |
| ! | AAGTGTTGTGGAATTAAGAG+GGG | - | chr5_3:64820879-64820898 | Msa0825080:intron | 35.0% |
| !! | GTTCGAAAGAGTTGGTATAT+TGG | - | chr5_3:64821232-64821251 | Msa0825080:intron | 35.0% |
| TGAGTTTGTACTGTGTAAAG+AGG | - | chr5_3:64821325-64821344 | Msa0825080:intron | 35.0% | |
| TGGTACTTAGGGTAATTAGA+AGG | + | chr5_3:64821377-64821396 | None:intergenic | 35.0% | |
| ATTCCATCAAGTGGTACTTA+GGG | + | chr5_3:64821388-64821407 | None:intergenic | 35.0% | |
| ! | TGAATATTGAAGCACTTGGA+AGG | + | chr5_3:64821429-64821448 | None:intergenic | 35.0% |
| TTCTTGTATGCATCATTCAC+AGG | + | chr5_3:64821550-64821569 | None:intergenic | 35.0% | |
| TATGCAGCTTTCTAACAAAG+AGG | - | chr5_3:64821575-64821594 | Msa0825080:intron | 35.0% | |
| ATGCAGCTTTCTAACAAAGA+GGG | - | chr5_3:64821576-64821595 | Msa0825080:intron | 35.0% | |
| GTGGAACACTGAAGTTATAT+AGG | - | chr5_3:64821700-64821719 | Msa0825080:intron | 35.0% | |
| TCAATGAGCAATCTATTGTG+AGG | - | chr5_3:64821725-64821744 | Msa0825080:intron | 35.0% | |
| AACCAACTGTCAAAAGAGTT+AGG | - | chr5_3:64821833-64821852 | Msa0825080:intron | 35.0% | |
| ! | AACCTAACTCTTTTGACAGT+TGG | + | chr5_3:64821838-64821857 | None:intergenic | 35.0% |
| ! | ATTAGGTGAAAGTGCATGAA+TGG | - | chr5_3:64821858-64821877 | Msa0825080:intron | 35.0% |
| !!! | TTTTTGGGATAGTTGGTTCT+TGG | + | chr5_3:64822045-64822064 | None:intergenic | 35.0% |
| ATTAAGTGGTAGCACACAAT+TGG | - | chr5_3:64822072-64822091 | Msa0825080:intron | 35.0% | |
| TATTGCTTGATATAGGCACT+AGG | + | chr5_3:64822148-64822167 | None:intergenic | 35.0% | |
| TCACGATAACTATATCTGTC+TGG | - | chr5_3:64822428-64822447 | Msa0825080:intron | 35.0% | |
| ACACTTCTATTTGTGAGACA+GGG | - | chr5_3:64822546-64822565 | Msa0825080:intron | 35.0% | |
| ! | GTCACATTGATGACATTTGA+AGG | - | chr5_3:64822724-64822743 | Msa0825080:intron | 35.0% |
| ! | TTGATGACATTTGAAGGAGA+TGG | - | chr5_3:64822730-64822749 | Msa0825080:intron | 35.0% |
| TGATGACATTTGAAGGAGAT+GGG | - | chr5_3:64822731-64822750 | Msa0825080:intron | 35.0% | |
| GACAATGAAATATATCAGGG+GGG | + | chr5_3:64822890-64822909 | None:intergenic | 35.0% | |
| GGACAATGAAATATATCAGG+GGG | + | chr5_3:64822891-64822910 | None:intergenic | 35.0% | |
| GGGACAATGAAATATATCAG+GGG | + | chr5_3:64822892-64822911 | None:intergenic | 35.0% | |
| ! | ATGACATAATTTGGAACGGA+TGG | + | chr5_3:64822958-64822977 | None:intergenic | 35.0% |
| ! | ATGGACCATCTAAAATCAGA+GGG | + | chr5_3:64823391-64823410 | None:intergenic | 35.0% |
| ! | AATGGACCATCTAAAATCAG+AGG | + | chr5_3:64823392-64823411 | None:intergenic | 35.0% |
| ! | TCTGATTTTAGATGGTCCAT+TGG | - | chr5_3:64823391-64823410 | Msa0825080:intron | 35.0% |
| ACATAATTGGCTGGTGTATT+TGG | - | chr5_3:64823450-64823469 | Msa0825080:intron | 35.0% | |
| CATTAGTGTAGAATCTCTGA+AGG | - | chr5_3:64823658-64823677 | Msa0825080:intron | 35.0% | |
| CAAAATCAGTTCAATTCGTC+TGG | + | chr5_3:64823884-64823903 | None:intergenic | 35.0% | |
| ATGATGTGTTAGAATCTGCA+TGG | - | chr5_3:64823906-64823925 | Msa0825080:intron | 35.0% | |
| AATCCATGCCTCATATATGT+TGG | + | chr5_3:64823959-64823978 | None:intergenic | 35.0% | |
| ! | GTCATTGGTTGTGGAAAAAA+TGG | - | chr5_3:64824048-64824067 | Msa0825080:intron | 35.0% |
| TTAACGCATGTCAGAAGATA+TGG | + | chr5_3:64824232-64824251 | None:intergenic | 35.0% | |
| ACATGCGTTAAAACGAAACA+TGG | - | chr5_3:64824241-64824260 | Msa0825080:intron | 35.0% | |
| ! | CTGATGAGATCTTTTTGTCA+TGG | - | chr5_3:64824347-64824366 | Msa0825080:intron | 35.0% |
| ! | CCGTGATTGGTTATGAAATA+TGG | - | chr5_3:64824454-64824473 | Msa0825080:intron | 35.0% |
| !! | CTTGTTGAGCTGATTTGATT+TGG | + | chr5_3:64824580-64824599 | None:intergenic | 35.0% |
| AAATCAGCTCAACAAGAGTA+AGG | - | chr5_3:64824584-64824603 | Msa0825080:five_prime_UTR | 35.0% | |
| TGTAACTAATGACTCTTGCA+TGG | + | chr5_3:64824856-64824875 | None:intergenic | 35.0% | |
| !! | TTTGGTGTTGTAAAACTAGC+AGG | - | chr5_3:64824910-64824929 | Msa0825080:intron | 35.0% |
| CCTTACTGCTTATGCTTATG+GGG | - | chr5_3:64818021-64818040 | Msa0825080:CDS | 40.0% | |
| ! | AATGGGAACAATCTGGTTTC+TGG | + | chr5_3:64818117-64818136 | None:intergenic | 40.0% |
| CATTCATCAACCCAAAGACA+AGG | - | chr5_3:64818188-64818207 | Msa0825080:intron | 40.0% | |
| CAACTAATGCTCCTTGTCTT+TGG | + | chr5_3:64818202-64818221 | None:intergenic | 40.0% | |
| ACCAGGACAGCTAAGTATAA+AGG | - | chr5_3:64818465-64818484 | Msa0825080:intron | 40.0% | |
| TCCTTTATACTTAGCTGTCC+TGG | + | chr5_3:64818469-64818488 | None:intergenic | 40.0% | |
| CAATCTATGACAGCCATAGA+TGG | + | chr5_3:64818962-64818981 | None:intergenic | 40.0% | |
| TTTCAACGTAGACAACCAAG+AGG | + | chr5_3:64819498-64819517 | None:intergenic | 40.0% | |
| !! | GAATTGATTTTGGCCAAACG+TGG | - | chr5_3:64819743-64819762 | Msa0825080:intron | 40.0% |
| CACAGTCAAAAAATCCGAGA+TGG | + | chr5_3:64819943-64819962 | None:intergenic | 40.0% | |
| GTGATACTGTTATTCTGCAG+TGG | - | chr5_3:64820596-64820615 | Msa0825080:intron | 40.0% | |
| TGGCAGGATTTATGTCATTC+TGG | - | chr5_3:64820616-64820635 | Msa0825080:intron | 40.0% | |
| CAGGATTTATGTCATTCTGG+TGG | - | chr5_3:64820619-64820638 | Msa0825080:intron | 40.0% | |
| ! | TCGTTTCTTCAAGCTTGCTT+TGG | - | chr5_3:64820728-64820747 | Msa0825080:intron | 40.0% |
| ! | CGTTTCTTCAAGCTTGCTTT+GGG | - | chr5_3:64820729-64820748 | Msa0825080:intron | 40.0% |
| ! | ACCATTTACAGTGGTTTTCG+AGG | - | chr5_3:64820992-64821011 | Msa0825080:intron | 40.0% |
| ACCTCGAAAACCACTGTAAA+TGG | + | chr5_3:64820996-64821015 | None:intergenic | 40.0% | |
| CCAACTCTTTCGAACATCAT+TGG | + | chr5_3:64821227-64821246 | None:intergenic | 40.0% | |
| CCAATGATGTTCGAAAGAGT+TGG | - | chr5_3:64821224-64821243 | Msa0825080:intron | 40.0% | |
| TTACCCTAAGTACCACTTGA+TGG | - | chr5_3:64821382-64821401 | Msa0825080:intron | 40.0% | |
| CATTCCATCAAGTGGTACTT+AGG | + | chr5_3:64821389-64821408 | None:intergenic | 40.0% | |
| AGAGATGCGTTGAATTCCAA+AGG | - | chr5_3:64821496-64821515 | Msa0825080:intron | 40.0% | |
| TCCAAAGGCTACTGTGTAAT+TGG | - | chr5_3:64821511-64821530 | Msa0825080:intron | 40.0% | |
| TCCAATTACACAGTAGCCTT+TGG | + | chr5_3:64821515-64821534 | None:intergenic | 40.0% | |
| AAAGGCTACTGTGTAATTGG+AGG | - | chr5_3:64821514-64821533 | Msa0825080:intron | 40.0% | |
| AAGGCTACTGTGTAATTGGA+GGG | - | chr5_3:64821515-64821534 | Msa0825080:intron | 40.0% | |
| AAATACATGCTTGGCATGTG+TGG | - | chr5_3:64821681-64821700 | Msa0825080:intron | 40.0% | |
| TTCTGCTTGGCATTTAGACA+AGG | - | chr5_3:64821780-64821799 | Msa0825080:intron | 40.0% | |
| GTTCTCACACAAAAGCCATT+TGG | - | chr5_3:64821897-64821916 | Msa0825080:intron | 40.0% | |
| TCAGAGTCTCTATTACCAAG+TGG | + | chr5_3:64822014-64822033 | None:intergenic | 40.0% | |
| ! | ACAAATAGAAGTGTGGACTC+TGG | + | chr5_3:64822540-64822559 | None:intergenic | 40.0% |
| CTGTCTCACAAATAGAAGTG+TGG | + | chr5_3:64822547-64822566 | None:intergenic | 40.0% | |
| CACACTTCTATTTGTGAGAC+AGG | - | chr5_3:64822545-64822564 | Msa0825080:intron | 40.0% | |
| TCGTTGAAGACTTGTCTGTT+AGG | + | chr5_3:64822590-64822609 | None:intergenic | 40.0% | |
| GATGACATTTGAAGGAGATG+GGG | - | chr5_3:64822732-64822751 | Msa0825080:intron | 40.0% | |
| ! | TTCCTCCCTCTGATTTTAGA+TGG | - | chr5_3:64823383-64823402 | Msa0825080:intron | 40.0% |
| ACAGATAATACTAGGGCCAA+TGG | + | chr5_3:64823410-64823429 | None:intergenic | 40.0% | |
| !! | GTTTTATGGGGGCACATAAT+TGG | - | chr5_3:64823437-64823456 | Msa0825080:intron | 40.0% |
| !! | CTGGTGTATTTGGTTCTGTA+TGG | - | chr5_3:64823460-64823479 | Msa0825080:intron | 40.0% |
| ATCCAGGAATTCCAAAGGAA+TGG | + | chr5_3:64823712-64823731 | None:intergenic | 40.0% | |
| CCAAAATCCAGGAATTCCAA+AGG | + | chr5_3:64823717-64823736 | None:intergenic | 40.0% | |
| !!! | CCTTTGGAATTCCTGGATTT+TGG | - | chr5_3:64823714-64823733 | Msa0825080:intron | 40.0% |
| CTTCCAACATATATGAGGCA+TGG | - | chr5_3:64823953-64823972 | Msa0825080:intron | 40.0% | |
| ! | TATGTTAAGTGATTTGCCCC+TGG | - | chr5_3:64823999-64824018 | Msa0825080:intron | 40.0% |
| !!! | TCCATTTTTTCCACAACCAG+GGG | + | chr5_3:64824018-64824037 | None:intergenic | 40.0% |
| !!! | GTCCATTTTTTCCACAACCA+GGG | + | chr5_3:64824019-64824038 | None:intergenic | 40.0% |
| !!! | AGTCCATTTTTTCCACAACC+AGG | + | chr5_3:64824020-64824039 | None:intergenic | 40.0% |
| CCTACAGTTTGACCTTAATG+TGG | + | chr5_3:64824327-64824346 | None:intergenic | 40.0% | |
| CCACATTAAGGTCAAACTGT+AGG | - | chr5_3:64824324-64824343 | Msa0825080:intron | 40.0% | |
| GCATGGGAATTTCAAATCGA+AGG | - | chr5_3:64824384-64824403 | Msa0825080:intron | 40.0% | |
| TGAAGCTGTAAGCAGAAAGC+CGG | + | chr5_3:64817811-64817830 | None:intergenic | 45.0% | |
| CCCCATAAGCATAAGCAGTA+AGG | + | chr5_3:64818024-64818043 | None:intergenic | 45.0% | |
| AGCGATGAATGGGAACAATC+TGG | + | chr5_3:64818124-64818143 | None:intergenic | 45.0% | |
| AGGACAAAAAGAGACAACGG+CGG | + | chr5_3:64818272-64818291 | None:intergenic | 45.0% | |
| !! | GAACGGCTGTTTTCAGTTAC+GGG | + | chr5_3:64818815-64818834 | None:intergenic | 45.0% |
| !! | GGAACGGCTGTTTTCAGTTA+CGG | + | chr5_3:64818816-64818835 | None:intergenic | 45.0% |
| GAACACACTGTCTTCTCTCT+TGG | - | chr5_3:64819446-64819465 | Msa0825080:intron | 45.0% | |
| ! | CAATTGGTGCCCATCAAAGA+GGG | - | chr5_3:64819688-64819707 | Msa0825080:intron | 45.0% |
| ! | AATTGGTGCCCATCAAAGAG+GGG | - | chr5_3:64819689-64819708 | Msa0825080:intron | 45.0% |
| TTCGCTGAAGCTAGAATTCG+TGG | + | chr5_3:64819900-64819919 | None:intergenic | 45.0% | |
| !!! | GGTTTTGGGTGATTCCATCT+CGG | - | chr5_3:64819926-64819945 | Msa0825080:intron | 45.0% |
| CAAATCCGAGAGAGAAGGAA+GGG | + | chr5_3:64819988-64820007 | None:intergenic | 45.0% | |
| CGCTATAAGCACCTAAGTAC+AGG | + | chr5_3:64820168-64820187 | None:intergenic | 45.0% | |
| TATGGATGTTCCTTTGCCGT+TGG | - | chr5_3:64820446-64820465 | Msa0825080:intron | 45.0% | |
| ATTAGTAATGAACCCTCCCC+TGG | - | chr5_3:64820489-64820508 | Msa0825080:intron | 45.0% | |
| TTGTTTGTGTTTCCAGGGGA+GGG | + | chr5_3:64820504-64820523 | None:intergenic | 45.0% | |
| TACTGTTATTCTGCAGTGGC+AGG | - | chr5_3:64820600-64820619 | Msa0825080:intron | 45.0% | |
| TATGTCATTCTGGTGGCAAC+TGG | - | chr5_3:64820626-64820645 | Msa0825080:intron | 45.0% | |
| ! | CTACTTGGTGGGAAAAGACT+TGG | + | chr5_3:64821075-64821094 | None:intergenic | 45.0% |
| ACTTTCCAGCTCTACTTGGT+GGG | + | chr5_3:64821086-64821105 | None:intergenic | 45.0% | |
| AACCACTTTCCAGCTCTACT+TGG | + | chr5_3:64821090-64821109 | None:intergenic | 45.0% | |
| ACCACTTGATGGAATGTCGT+TGG | - | chr5_3:64821393-64821412 | Msa0825080:intron | 45.0% | |
| GCATCTCTTGCAAGCTCTAT+TGG | + | chr5_3:64821484-64821503 | None:intergenic | 45.0% | |
| AGCCATTTGGACTTGAAGCA+TGG | - | chr5_3:64821910-64821929 | Msa0825080:intron | 45.0% | |
| GTCCATGCTTCAAGTCCAAA+TGG | + | chr5_3:64821915-64821934 | None:intergenic | 45.0% | |
| ! | CCAAGTGGTCTAGAGTTCAA+TGG | + | chr5_3:64821999-64822018 | None:intergenic | 45.0% |
| CCATTGAACTCTAGACCACT+TGG | - | chr5_3:64821996-64822015 | Msa0825080:intron | 45.0% | |
| TGTAATGGTTGATCCATGGG+AGG | - | chr5_3:64822289-64822308 | Msa0825080:intron | 45.0% | |
| AAAGAGTAGTGTACCTCCCA+TGG | + | chr5_3:64822305-64822324 | None:intergenic | 45.0% | |
| ATAGGACAGTCAAAGTGCGT+TGG | + | chr5_3:64822517-64822536 | None:intergenic | 45.0% | |
| ! | TAGAAGTGTGGACTCTGGAT+AGG | + | chr5_3:64822535-64822554 | None:intergenic | 45.0% |
| !! | GAGACAGGGTTGATATCTAG+AGG | - | chr5_3:64822560-64822579 | Msa0825080:intron | 45.0% |
| ! | GGAAGAGGACCATTCTGAAA+AGG | + | chr5_3:64822632-64822651 | None:intergenic | 45.0% |
| ACCAGGGAAAGAAGAAACAC+CGG | - | chr5_3:64822668-64822687 | Msa0825080:intron | 45.0% | |
| GGGGGTCCTATATTTAAGGA+TGG | + | chr5_3:64822872-64822891 | None:intergenic | 45.0% | |
| TCAGGGGGGTCCTATATTTA+AGG | + | chr5_3:64822876-64822895 | None:intergenic | 45.0% | |
| ! | GACCATCTAAAATCAGAGGG+AGG | + | chr5_3:64823388-64823407 | None:intergenic | 45.0% |
| ! | GGTACTAAAGCGTTCAGAAG+TGG | - | chr5_3:64823481-64823500 | Msa0825080:intron | 45.0% |
| CTGAAGGTCATGCTTGTTTG+TGG | - | chr5_3:64823674-64823693 | Msa0825080:intron | 45.0% | |
| TCTGATCTCCTCCATTCCTT+TGG | - | chr5_3:64823698-64823717 | Msa0825080:intron | 45.0% | |
| CAGGAATTCCAAAGGAATGG+AGG | + | chr5_3:64823709-64823728 | None:intergenic | 45.0% | |
| !! | CTCCATTCCTTTGGAATTCC+TGG | - | chr5_3:64823707-64823726 | Msa0825080:intron | 45.0% |
| TGGTCAGGAATCCAAAATCC+AGG | + | chr5_3:64823728-64823747 | None:intergenic | 45.0% | |
| ! | TGGATTTTGGATTCCTGACC+AGG | - | chr5_3:64823727-64823746 | Msa0825080:intron | 45.0% |
| CTACACAACGCATAAGTACC+TGG | + | chr5_3:64823748-64823767 | None:intergenic | 45.0% | |
| TGGCAACATGTGCAAATGCA+TGG | - | chr5_3:64824367-64824386 | Msa0825080:intron | 45.0% | |
| GGCAACATGTGCAAATGCAT+GGG | - | chr5_3:64824368-64824387 | Msa0825080:intron | 45.0% | |
| ACATTCTTCTCAGCCGTGAT+TGG | - | chr5_3:64824441-64824460 | Msa0825080:intron | 45.0% | |
| TTCAGGGAATGCATTGCAAG+AGG | - | chr5_3:64824712-64824731 | Msa0825080:intron | 45.0% | |
| !! | ATGTTATATATTAAATTTAA+AGG | + | chr5_3:64818701-64818720 | None:intergenic | 5.0% |
| !!! | AAAAATATAATTTAAGTTTA+AGG | + | chr5_3:64821762-64821781 | None:intergenic | 5.0% |
| !!! | TTATTTTTCAATATATATTT+AGG | - | chr5_3:64823323-64823342 | Msa0825080:intron | 5.0% |
| !!! | TATTTTTCAATATATATTTA+GGG | - | chr5_3:64823324-64823343 | Msa0825080:intron | 5.0% |
| GTAAGCAGAAAGCCGGAGTA+TGG | + | chr5_3:64817804-64817823 | None:intergenic | 50.0% | |
| ! | CTAGCTTCGCTGCTGATTGT+AGG | - | chr5_3:64818787-64818806 | Msa0825080:intron | 50.0% |
| !! | TAGACAACCAAGAGGCGTTC+AGG | + | chr5_3:64819490-64819509 | None:intergenic | 50.0% |
| ! | GCAATTGGTGCCCATCAAAG+AGG | - | chr5_3:64819687-64819706 | Msa0825080:intron | 50.0% |
| CGACTTTGCCCCTCTTTGAT+GGG | + | chr5_3:64819700-64819719 | None:intergenic | 50.0% | |
| TCGACTTTGCCCCTCTTTGA+TGG | + | chr5_3:64819701-64819720 | None:intergenic | 50.0% | |
| TTTGGCCAAACGTGGAAGCT+AGG | - | chr5_3:64819751-64819770 | Msa0825080:intron | 50.0% | |
| TCCTTCCTAGCTTCCACGTT+TGG | + | chr5_3:64819759-64819778 | None:intergenic | 50.0% | |
| CAGAACCCTTCCTTCTCTCT+CGG | - | chr5_3:64819980-64819999 | Msa0825080:intron | 50.0% | |
| GCAAATCCGAGAGAGAAGGA+AGG | + | chr5_3:64819989-64820008 | None:intergenic | 50.0% | |
| CTTCTCTCTCGGATTTGCAG+CGG | - | chr5_3:64819991-64820010 | Msa0825080:intron | 50.0% | |
| TTCTCTCTCGGATTTGCAGC+GGG | - | chr5_3:64819992-64820011 | Msa0825080:intron | 50.0% | |
| CTTGTTTGTGTTTCCAGGGG+AGG | + | chr5_3:64820505-64820524 | None:intergenic | 50.0% | |
| ! | CTTTTCCCACCAAGTAGAGC+TGG | - | chr5_3:64821078-64821097 | Msa0825080:intron | 50.0% |
| CACTTTCCAGCTCTACTTGG+TGG | + | chr5_3:64821087-64821106 | None:intergenic | 50.0% | |
| CACCAAGTAGAGCTGGAAAG+TGG | - | chr5_3:64821085-64821104 | Msa0825080:intron | 50.0% | |
| GCCAACGACATTCCATCAAG+TGG | + | chr5_3:64821397-64821416 | None:intergenic | 50.0% | |
| ! | GGATAGTTGGTTCTTGGCGA+TGG | + | chr5_3:64822039-64822058 | None:intergenic | 50.0% |
| ! | TATGGGGGCACATAATTGGC+TGG | - | chr5_3:64823441-64823460 | Msa0825080:intron | 50.0% |
| CAACGCATAAGTACCTGGTC+AGG | + | chr5_3:64823743-64823762 | None:intergenic | 50.0% | |
| ! | AAGTGATTTGCCCCTGGTTG+TGG | - | chr5_3:64824005-64824024 | Msa0825080:intron | 50.0% |
| GCCCCTGGTTGTGGAAAAAA+TGG | - | chr5_3:64824014-64824033 | Msa0825080:intron | 50.0% | |
| GTAGTCTGCATACGCAGAGA+AGG | - | chr5_3:64824132-64824151 | Msa0825080:intron | 50.0% | |
| TCTCTTGCCTGAACGCCTCT+TGG | - | chr5_3:64819480-64819499 | Msa0825080:intron | 55.0% | |
| GCCAAACGTGGAAGCTAGGA+AGG | - | chr5_3:64819755-64819774 | Msa0825080:intron | 55.0% | |
| ! | TCTAGCTTCAGCGAAACGCG+CGG | - | chr5_3:64819905-64819924 | Msa0825080:intron | 55.0% |
| ! | TTCAGCGAAACGCGCGGTTT+TGG | - | chr5_3:64819911-64819930 | Msa0825080:intron | 55.0% |
| ! | TCAGCGAAACGCGCGGTTTT+GGG | - | chr5_3:64819912-64819931 | Msa0825080:intron | 55.0% |
| CGCTGCAAATCCGAGAGAGA+AGG | + | chr5_3:64819993-64820012 | None:intergenic | 55.0% | |
| TCTCTCTCGGATTTGCAGCG+GGG | - | chr5_3:64819993-64820012 | Msa0825080:intron | 55.0% | |
| GCCGGTGTTTCTTCTTTCCC+TGG | + | chr5_3:64822672-64822691 | None:intergenic | 55.0% | |
| CTCTCTCGGATTTGCAGCGG+GGG | - | chr5_3:64819994-64820013 | Msa0825080:intron | 60.0% | |
| AACGGCGGCAGTGACGACGA+CGG | + | chr5_3:64818257-64818276 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64817801 | 64825023 | 64817801 | ID=Msa0825080;Name=Msa0825080 |
| chr5_3 | mRNA | 64817801 | 64825023 | 64817801 | ID=Msa0825080-mRNA-1;Parent=Msa0825080;Name=Msa0825080-mRNA-1;_AED=0.19;_eAED=0.19;_QI=304|1|1|1|0.72|0.66|12|204|249 |
| chr5_3 | exon | 64817801 | 64818107 | 64817801 | ID=Msa0825080-mRNA-1:exon:20275;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64818219 | 64818277 | 64818219 | ID=Msa0825080-mRNA-1:exon:20274;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64818618 | 64818719 | 64818618 | ID=Msa0825080-mRNA-1:exon:20273;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64819076 | 64819155 | 64819076 | ID=Msa0825080-mRNA-1:exon:20272;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64820243 | 64820327 | 64820243 | ID=Msa0825080-mRNA-1:exon:20271;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64820514 | 64820597 | 64820514 | ID=Msa0825080-mRNA-1:exon:20270;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64821251 | 64821336 | 64821251 | ID=Msa0825080-mRNA-1:exon:20269;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64822135 | 64822208 | 64822135 | ID=Msa0825080-mRNA-1:exon:20268;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64822301 | 64822380 | 64822301 | ID=Msa0825080-mRNA-1:exon:20267;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64822809 | 64822841 | 64822809 | ID=Msa0825080-mRNA-1:exon:20266;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64824524 | 64824706 | 64824524 | ID=Msa0825080-mRNA-1:exon:20265;Parent=Msa0825080-mRNA-1 |
| chr5_3 | exon | 64824939 | 64825023 | 64824939 | ID=Msa0825080-mRNA-1:exon:20264;Parent=Msa0825080-mRNA-1 |
| chr5_3 | five_prime_UTR | 64824939 | 64825023 | 64824939 | ID=Msa0825080-mRNA-1:five_prime_utr;Parent=Msa0825080-mRNA-1 |
| chr5_3 | five_prime_UTR | 64824524 | 64824706 | 64824524 | ID=Msa0825080-mRNA-1:five_prime_utr;Parent=Msa0825080-mRNA-1 |
| chr5_3 | five_prime_UTR | 64822809 | 64822841 | 64822809 | ID=Msa0825080-mRNA-1:five_prime_utr;Parent=Msa0825080-mRNA-1 |
| chr5_3 | five_prime_UTR | 64822378 | 64822380 | 64822378 | ID=Msa0825080-mRNA-1:five_prime_utr;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64822301 | 64822377 | 64822301 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64822135 | 64822208 | 64822135 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64821251 | 64821336 | 64821251 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64820514 | 64820597 | 64820514 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64820243 | 64820327 | 64820243 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64819076 | 64819155 | 64819076 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64818618 | 64818719 | 64818618 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64818219 | 64818277 | 64818219 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | CDS | 64818005 | 64818107 | 64818005 | ID=Msa0825080-mRNA-1:cds;Parent=Msa0825080-mRNA-1 |
| chr5_3 | three_prime_UTR | 64817801 | 64818004 | 64817801 | ID=Msa0825080-mRNA-1:three_prime_utr;Parent=Msa0825080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
