AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742380 MtrunA17_Chr4g0037241 78.409 88 6 1 3 90 79 153 8.08e-41 131
Msa0742380 MtrunA17_Chr4g0037241 69.663 89 14 1 1 89 1 76 3.39e-34 114
Msa0742380 MtrunA17_Chr5g0444101 78.409 88 6 1 3 90 79 153 8.08e-41 131
Msa0742380 MtrunA17_Chr5g0444101 69.663 89 14 1 1 89 1 76 3.39e-34 114
Msa0742380 MtrunA17_Chr6g0475951 69.663 89 14 1 1 89 1 76 2.51e-35 115
Msa0742380 MtrunA17_Chr7g0266661 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa0742380 MtrunA17_Chr1g0178381 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa0742380 MtrunA17_Chr3g0127481 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa0742380 MtrunA17_Chr5g0413361 69.663 89 14 1 1 89 1 76 1.62e-34 115
Msa0742380 MtrunA17_Chr8g0380181 69.663 89 14 1 1 89 1 76 1.69e-34 115
Msa0742380 MtrunA17_Chr6g0475961 69.663 89 14 1 1 89 4 79 5.47e-34 115
Msa0742380 MtrunA17_Chr6g0475961 69.663 89 14 1 1 89 80 155 5.47e-34 115
Msa0742380 MtrunA17_Chr6g0475961 72.000 50 1 1 1 50 156 192 7.03e-14 63.5
Msa0742380 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 3 78 1.25e-33 115
Msa0742380 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 79 154 1.25e-33 115
Msa0742380 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 155 230 1.25e-33 115
Msa0742380 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 1 76 1.73e-33 115
Msa0742380 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 77 152 1.73e-33 115
Msa0742380 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 153 228 1.73e-33 115
Msa0742380 MtrunA17_Chr4g0041751 69.663 89 14 1 1 89 77 152 2.33e-33 114
Msa0742380 MtrunA17_Chr4g0041751 68.539 89 15 1 1 89 1 76 1.14e-32 113
Msa0742380 MtrunA17_Chr4g0041751 53.933 89 28 1 1 89 153 228 1.02e-20 82.0
Msa0742380 MtrunA17_Chr8g0377821 70.000 90 14 1 1 90 313 389 3.46e-33 117
Msa0742380 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 9 84 3.05e-32 115
Msa0742380 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 85 160 3.05e-32 115
Msa0742380 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 161 236 3.05e-32 115
Msa0742380 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 237 312 3.05e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 4 79 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 80 155 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 156 231 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 232 307 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 308 383 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 384 459 5.94e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 5 80 6.12e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 81 156 6.12e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 157 232 6.12e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 233 308 6.12e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 309 384 6.12e-32 115
Msa0742380 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 385 460 6.12e-32 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 4 79 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 80 155 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 156 231 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 232 307 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 308 383 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 384 459 1.01e-31 115
Msa0742380 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 460 535 1.01e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 4 79 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 80 155 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 156 231 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 232 307 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 384 459 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 460 535 1.10e-31 115
Msa0742380 MtrunA17_Chr4g0048591 68.539 89 15 1 1 89 308 383 1.10e-30 112
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 1 76 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 77 152 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 153 228 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 229 304 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 305 380 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 381 456 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 457 532 1.11e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 80 155 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 156 231 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 232 307 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 368 443 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 444 519 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 520 595 1.29e-31 115
Msa0742380 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 4 79 1.38e-31 115
Msa0742380 MtrunA17_Chr8g0374171 67.416 89 16 1 1 89 74 149 3.28e-24 89.7
Msa0742380 MtrunA17_Chr8g0374161 73.684 57 2 1 1 57 9 52 1.37e-19 74.7
Msa0742380 MtrunA17_Chr5g0433631 54.762 84 25 1 1 84 266 336 4.85e-19 79.3
Msa0742380 MtrunA17_Chr5g0433721 51.111 90 30 2 1 89 194 270 1.72e-18 77.0
Msa0742380 MtrunA17_Chr1g0169371 50.000 88 31 1 1 88 215 289 3.24e-18 76.6
Msa0742380 MtrunA17_Chr5g0428191 51.136 88 30 1 1 88 241 315 1.52e-17 75.1
Msa0742380 MtrunA17_Chr5g0424981 43.182 88 37 1 1 88 2 76 6.85e-16 65.9
Msa0742380 MtrunA17_Chr5g0433661 45.455 88 35 1 1 88 278 352 1.51e-14 67.0
Msa0742380 MtrunA17_Chr5g0433681 42.697 89 37 2 1 88 1 76 1.94e-14 62.4
Msa0742380 MtrunA17_Chr5g0433411 46.512 86 33 1 1 86 267 339 3.28e-14 65.9
Msa0742380 MtrunA17_Chr2g0298951 43.182 88 37 2 1 88 236 310 9.39e-14 64.7
Msa0742380 MtrunA17_Chr2g0298941 42.045 88 38 1 1 88 177 251 1.56e-13 63.5
Msa0742380 MtrunA17_Chr1g0169401 43.373 83 34 1 7 89 2 71 5.63e-13 58.5
Msa0742380 MtrunA17_Chr5g0424971 42.045 88 38 1 1 88 252 326 5.69e-13 62.4
Msa0742380 MtrunA17_Chr5g0433521 38.636 88 41 1 1 88 240 314 8.63e-13 62.0
Msa0742380 MtrunA17_Chr7g0259431 40.909 88 39 1 1 88 223 297 1.29e-12 61.2
Msa0742380 MtrunA17_Chr4g0003111 37.500 88 42 1 1 88 4 78 5.41e-12 56.2
Msa0742380 MtrunA17_Chr7g0223111 46.591 88 35 2 1 88 267 342 9.71e-12 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742380 AT1G31340.1 77.011 87 7 1 3 89 79 152 5.77e-39 127
Msa0742380 AT1G31340.1 68.889 90 15 1 1 90 1 77 6.90e-34 114
Msa0742380 AT2G35635.1 75.862 87 8 1 3 89 79 152 6.71e-38 124
Msa0742380 AT2G35635.1 68.889 90 15 1 1 90 1 77 5.25e-34 114
Msa0742380 AT2G36170.1 69.663 89 14 1 1 89 1 76 4.62e-35 116
Msa0742380 AT3G52590.1 69.663 89 14 1 1 89 1 76 4.62e-35 116
Msa0742380 AT1G23410.1 69.663 89 14 1 1 89 1 76 2.64e-34 115
Msa0742380 AT4G05320.7 69.663 89 14 1 1 89 1 76 2.92e-34 115
Msa0742380 AT4G05320.7 69.663 89 14 1 1 89 77 152 2.92e-34 115
Msa0742380 AT4G05050.4 69.663 89 14 1 1 89 1 76 2.92e-34 115
Msa0742380 AT4G05050.4 69.663 89 14 1 1 89 77 152 2.92e-34 115
Msa0742380 AT2G47110.2 69.663 89 14 1 1 89 1 76 3.69e-34 115
Msa0742380 AT2G47110.1 69.663 89 14 1 1 89 1 76 3.69e-34 115
Msa0742380 AT3G62250.1 69.663 89 14 1 1 89 1 76 3.73e-34 115
Msa0742380 AT4G02890.2 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa0742380 AT4G02890.2 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa0742380 AT4G02890.2 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa0742380 AT4G02890.1 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa0742380 AT4G02890.1 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa0742380 AT4G02890.1 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa0742380 AT4G05050.2 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa0742380 AT4G05050.2 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa0742380 AT4G05050.2 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa0742380 AT4G05050.1 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa0742380 AT4G05050.1 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa0742380 AT4G05050.1 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa0742380 AT4G05050.3 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa0742380 AT4G05050.3 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa0742380 AT4G05050.3 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa0742380 AT1G11980.1 65.169 89 18 1 1 89 1 76 2.71e-33 110
Msa0742380 AT1G55060.1 68.539 89 15 1 1 89 77 152 5.00e-33 114
Msa0742380 AT1G55060.1 66.667 90 17 1 1 90 153 229 2.80e-31 109
Msa0742380 AT1G55060.1 60.674 89 22 1 1 89 1 76 2.98e-28 102
Msa0742380 AT5G03240.3 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa0742380 AT5G03240.3 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa0742380 AT5G03240.3 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa0742380 AT5G03240.3 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa0742380 AT5G03240.2 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa0742380 AT5G03240.2 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa0742380 AT5G03240.2 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa0742380 AT5G03240.2 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa0742380 AT5G03240.1 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa0742380 AT5G03240.1 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa0742380 AT5G03240.1 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa0742380 AT5G03240.1 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa0742380 AT5G20620.2 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa0742380 AT5G20620.2 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa0742380 AT5G20620.2 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa0742380 AT5G20620.2 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa0742380 AT4G05320.5 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa0742380 AT4G05320.5 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa0742380 AT4G05320.5 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa0742380 AT4G05320.5 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa0742380 AT4G05320.8 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa0742380 AT4G05320.8 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa0742380 AT4G05320.8 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa0742380 AT4G05320.8 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa0742380 AT4G02890.3 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa0742380 AT4G02890.3 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa0742380 AT4G02890.3 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa0742380 AT4G02890.3 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa0742380 AT4G02890.4 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa0742380 AT4G02890.4 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa0742380 AT4G02890.4 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa0742380 AT4G02890.4 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa0742380 AT1G65350.1 69.663 89 14 1 1 89 1 76 1.19e-32 115
Msa0742380 AT1G65350.1 68.539 89 15 1 1 89 152 227 1.35e-31 112
Msa0742380 AT1G65350.1 68.539 89 14 2 1 89 77 151 1.19e-29 107
Msa0742380 AT1G65350.1 56.731 104 18 2 1 90 228 318 6.67e-26 97.8
Msa0742380 AT5G37640.1 68.539 89 15 1 1 89 79 154 2.00e-32 114
Msa0742380 AT5G37640.1 64.045 89 19 1 1 89 155 230 1.88e-28 104
Msa0742380 AT5G37640.1 64.444 90 18 2 1 89 231 307 1.76e-26 99.4
Msa0742380 AT5G37640.1 55.056 89 27 1 1 89 3 78 1.07e-21 86.7
Msa0742380 AT5G20620.1 68.889 90 15 1 1 90 305 381 2.38e-32 115
Msa0742380 AT5G20620.1 69.663 89 14 1 1 89 1 76 3.33e-32 115
Msa0742380 AT5G20620.1 69.663 89 14 1 1 89 77 152 3.33e-32 115
Msa0742380 AT5G20620.1 69.663 89 14 1 1 89 153 228 3.33e-32 115
Msa0742380 AT5G20620.1 69.663 89 14 1 1 89 229 304 3.33e-32 115
Msa0742380 AT4G05320.1 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa0742380 AT4G05320.1 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa0742380 AT4G05320.1 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa0742380 AT4G05320.1 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa0742380 AT4G05320.1 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa0742380 AT4G05320.6 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa0742380 AT4G05320.6 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa0742380 AT4G05320.6 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa0742380 AT4G05320.6 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa0742380 AT4G05320.6 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa0742380 AT4G05320.3 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa0742380 AT4G05320.3 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa0742380 AT4G05320.3 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa0742380 AT4G05320.3 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa0742380 AT4G05320.3 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 1 76 8.21e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 77 152 8.21e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 153 228 8.21e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 229 304 8.21e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 305 380 8.21e-32 115
Msa0742380 AT4G05320.2 69.663 89 14 1 1 89 381 456 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 1 76 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 77 152 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 153 228 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 229 304 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 305 380 8.21e-32 115
Msa0742380 AT4G05320.4 69.663 89 14 1 1 89 381 456 8.21e-32 115
Msa0742380 AT3G09790.2 65.169 89 18 1 1 89 79 154 7.05e-28 105
Msa0742380 AT3G09790.2 59.551 89 23 1 1 89 3 78 7.83e-24 94.0
Msa0742380 AT3G09790.2 57.471 87 24 1 1 87 552 625 2.04e-20 84.3
Msa0742380 AT3G09790.2 50.000 96 28 2 1 89 469 551 6.33e-19 80.1
Msa0742380 AT3G09790.2 50.562 89 31 1 1 89 393 468 4.35e-18 77.8
Msa0742380 AT3G09790.2 51.685 89 28 2 1 87 319 394 2.09e-17 75.9
Msa0742380 AT3G09790.2 48.936 94 30 2 1 89 238 318 9.26e-17 73.9
Msa0742380 AT3G09790.2 47.368 95 30 3 1 88 155 236 1.39e-16 73.2
Msa0742380 AT3G09790.1 65.169 89 18 1 1 89 79 154 7.05e-28 105
Msa0742380 AT3G09790.1 59.551 89 23 1 1 89 3 78 7.83e-24 94.0
Msa0742380 AT3G09790.1 57.471 87 24 1 1 87 552 625 2.04e-20 84.3
Msa0742380 AT3G09790.1 50.000 96 28 2 1 89 469 551 6.33e-19 80.1
Msa0742380 AT3G09790.1 50.562 89 31 1 1 89 393 468 4.35e-18 77.8
Msa0742380 AT3G09790.1 51.685 89 28 2 1 87 319 394 2.09e-17 75.9
Msa0742380 AT3G09790.1 48.936 94 30 2 1 89 238 318 9.26e-17 73.9
Msa0742380 AT3G09790.1 47.368 95 30 3 1 88 155 236 1.39e-16 73.2
Msa0742380 AT1G53930.1 52.326 86 28 1 1 86 86 158 5.21e-22 84.3
Msa0742380 AT1G53950.1 48.864 88 32 1 1 88 69 143 3.24e-18 73.9

Find 41 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCGGGGAGTATGGGTAAT+TGG 0.220216 5_1:+62270333 None:intergenic
CTCGAGGGTGATAGTCTTTC+CGG 0.220251 5_1:+62270172 None:intergenic
TAGCACTCTCACAAATTATA+AGG 0.228253 5_1:+62270370 None:intergenic
TTCGAGTGATGCGGGGAGTA+TGG 0.234685 5_1:+62270325 None:intergenic
GTTGGTCACTTTCTAGTTCT+TGG 0.255542 5_1:-62267925 Msa0742380:three_prime_UTR
GAGCTTCCTTTCATGTCTTT+AGG 0.290193 5_1:+62267877 None:intergenic
CGAGAAGAAAGAACTCTCTT+GGG 0.340955 5_1:-62270233 Msa0742380:five_prime_UTR
TCACTTGGTGCTTGCATTGA+GGG 0.346912 5_1:-62267993 Msa0742380:CDS
TCGAGAAGAAAGAACTCTCT+TGG 0.401708 5_1:-62270234 Msa0742380:five_prime_UTR
TTCGATCTCAAGAAATTAGT+TGG 0.413449 5_1:-62267943 Msa0742380:three_prime_UTR
TGCGGGGAGTATGGGTAATT+GGG 0.445043 5_1:+62270334 None:intergenic
TTCACTTGGTGCTTGCATTG+AGG 0.449045 5_1:-62267994 Msa0742380:CDS
TTGAGGGGTGGTAATTAGTA+AGG 0.455140 5_1:-62267977 Msa0742380:exon
ATCTTTGTGAAGACTTTGAC+CGG 0.455554 5_1:-62270191 Msa0742380:CDS
GGAATAACTAACCTGGATCT+TGG 0.463835 5_1:+62270115 None:intergenic
GGGTGGTTCTGTGCTTCACT+TGG 0.473264 5_1:-62268008 Msa0742380:CDS
GTTTCAAACCTCTGCTGCAC+AGG 0.478534 5_1:+62269682 None:intergenic
AGCACTCTCACAAATTATAA+GGG 0.482389 5_1:+62270371 None:intergenic
CACTTGGTGCTTGCATTGAG+GGG 0.485261 5_1:-62267992 Msa0742380:CDS
TGCTGCAGGCTCATCTATGC+TGG 0.492831 5_1:-62268076 Msa0742380:intron
CAACGTCAAGGCCAAGATCC+AGG 0.500226 5_1:-62270126 Msa0742380:intron
AACTCTCACCATTGTACTTG+TGG 0.507343 5_1:+62267718 None:intergenic
TCGAGTGATGCGGGGAGTAT+GGG 0.525413 5_1:+62270326 None:intergenic
TGATACTATTGATCGTATCA+AGG 0.532559 5_1:-62269734 Msa0742380:CDS
CTTGGCCTTGACGTTGTCGA+TGG 0.546175 5_1:+62270133 None:intergenic
TCAAACCTCTGCTGCACAGG+TGG 0.550195 5_1:+62269685 None:intergenic
AGAACAATCATGTCCTCAGA+TGG 0.551573 5_1:+62267845 None:intergenic
GTCGCTGCTCTCAACCTCGA+GGG 0.560617 5_1:+62270157 None:intergenic
GCTAAAGAGTACAACATTGA+GGG 0.566179 5_1:-62268028 Msa0742380:CDS
AGCTAAAGAGTACAACATTG+AGG 0.583787 5_1:-62268029 Msa0742380:CDS
GTATTCCACCTGTGCAGCAG+AGG 0.583967 5_1:-62269690 Msa0742380:intron
ATACGATCAATAGTATCAGT+AGG 0.588588 5_1:+62269739 None:intergenic
AACTATAACCACAAGTACAA+TGG 0.591736 5_1:-62267726 Msa0742380:three_prime_UTR
GAGAAGAAAGAACTCTCTTG+GGG 0.611073 5_1:-62270232 Msa0742380:five_prime_UTR
GCTCTATACTCGTCCATCTG+AGG 0.613555 5_1:-62267858 Msa0742380:three_prime_UTR
TTGGTGCTTGCATTGAGGGG+TGG 0.618700 5_1:-62267989 Msa0742380:CDS
TCTGAACCTAAAGACATGAA+AGG 0.620725 5_1:-62267883 Msa0742380:three_prime_UTR
TGTCGCTGCTCTCAACCTCG+AGG 0.630730 5_1:+62270156 None:intergenic
CGACACCATCGACAACGTCA+AGG 0.655064 5_1:-62270138 Msa0742380:CDS
AAAGAGTACAACATTGAGGG+TGG 0.697133 5_1:-62268025 Msa0742380:CDS
CGGAAAGACTATCACCCTCG+AGG 0.726420 5_1:-62270171 Msa0742380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTGAATTGATTATTA+TGG - chr5_1:62268082-62268101 Msa0742380:intron 10.0%
!! AAAATTGAATTGATTATTAT+GGG - chr5_1:62268083-62268102 Msa0742380:intron 10.0%
!! AATTTGAAAGTAGAAAAAAA+GGG + chr5_1:62268023-62268042 None:intergenic 15.0%
!! TAATTTGAAAGTAGAAAAAA+AGG + chr5_1:62268024-62268043 None:intergenic 15.0%
!! TACTTTCAAATTACTTAATT+AGG - chr5_1:62268031-62268050 Msa0742380:CDS 15.0%
!! ACTTTCAAATTACTTAATTA+GGG - chr5_1:62268032-62268051 Msa0742380:CDS 15.0%
!! CAAATAATTTAAAGAATGTT+TGG - chr5_1:62268467-62268486 Msa0742380:intron 15.0%
!! TTGCTAATTAAAAATTCAAA+TGG + chr5_1:62268534-62268553 None:intergenic 15.0%
!! AGAGATTTATTTATTTAGTT+AGG - chr5_1:62268585-62268604 Msa0742380:intron 15.0%
!!! TATCTAATTTTATATCTTGA+GGG + chr5_1:62268956-62268975 None:intergenic 15.0%
!!! ATATCTAATTTTATATCTTG+AGG + chr5_1:62268957-62268976 None:intergenic 15.0%
!!! TTATTACTTTTTGTTTTGAA+TGG + chr5_1:62269573-62269592 None:intergenic 15.0%
!!! ATTTTTTCTCTTAATTCTTT+TGG - chr5_1:62269984-62270003 Msa0742380:intron 15.0%
!! ATTTGAAAGTAGAAAAAAAG+GGG + chr5_1:62268022-62268041 None:intergenic 20.0%
!!! TACTTAATTAGGGTTTTTTT+AGG - chr5_1:62268042-62268061 Msa0742380:CDS 20.0%
!!! ACTTAATTAGGGTTTTTTTA+GGG - chr5_1:62268043-62268062 Msa0742380:CDS 20.0%
!! ATTTATTTATTTAGTTAGGC+TGG - chr5_1:62268589-62268608 Msa0742380:intron 20.0%
!! TTTATTTATTTAGTTAGGCT+GGG - chr5_1:62268590-62268609 Msa0742380:intron 20.0%
!! TGATCAAAGAATAGTATATA+AGG - chr5_1:62268772-62268791 Msa0742380:intron 20.0%
!!! ATCTAATTTTATATCTTGAG+GGG + chr5_1:62268955-62268974 None:intergenic 20.0%
!! GATGCAAAACTAAATATAAT+TGG + chr5_1:62269091-62269110 None:intergenic 20.0%
!!! TGCTTGGTTTTTATAATTTT+TGG - chr5_1:62270297-62270316 Msa0742380:five_prime_UTR 20.0%
!!! GCTTGGTTTTTATAATTTTT+GGG - chr5_1:62270298-62270317 Msa0742380:five_prime_UTR 20.0%
!!! TATAATTTTTGGGTAACTAT+TGG - chr5_1:62270308-62270327 Msa0742380:five_prime_UTR 20.0%
!!! ATGCTTTTAAACCAAAAAAT+TGG - chr5_1:62270346-62270365 Msa0742380:five_prime_UTR 20.0%
!!! TTTTTTAGGGTTCTATTGTT+AGG - chr5_1:62268056-62268075 Msa0742380:CDS 25.0%
! TAAAGTCTTGACTTTAATCA+TGG + chr5_1:62268324-62268343 None:intergenic 25.0%
! ATTAAAGTCAAGACTTTAAC+CGG - chr5_1:62268326-62268345 Msa0742380:intron 25.0%
! GTCAATTTCAATTTCTTTAC+CGG + chr5_1:62268348-62268367 None:intergenic 25.0%
! CAAGTTACTGTTAATATGAT+AGG - chr5_1:62268551-62268570 Msa0742380:intron 25.0%
! TTGCCTATGATAAAAAAAAG+AGG - chr5_1:62268633-62268652 Msa0742380:intron 25.0%
! TGCCTATGATAAAAAAAAGA+GGG - chr5_1:62268634-62268653 Msa0742380:intron 25.0%
!!! CTTTTATCTGGAATCATAAA+AGG + chr5_1:62269227-62269246 None:intergenic 25.0%
! AGATAGTAAGAAGAAATACA+TGG - chr5_1:62269439-62269458 Msa0742380:intron 25.0%
! GATAGTAAGAAGAAATACAT+GGG - chr5_1:62269440-62269459 Msa0742380:intron 25.0%
! ATAGTAAGAAGAAATACATG+GGG - chr5_1:62269441-62269460 Msa0742380:intron 25.0%
! GTCATTGATATATCTTATAC+AGG - chr5_1:62269775-62269794 Msa0742380:intron 25.0%
!!! TCATTAAGATGCCAATTTTT+TGG + chr5_1:62270360-62270379 None:intergenic 25.0%
AGCACTCTCACAAATTATAA+GGG + chr5_1:62267745-62267764 None:intergenic 30.0%
TAGCACTCTCACAAATTATA+AGG + chr5_1:62267746-62267765 None:intergenic 30.0%
!! TGTTTGGTCAATACTAGTTT+TGG - chr5_1:62268110-62268129 Msa0742380:intron 30.0%
! CTTGATTTTGTGATTCTAAC+TGG - chr5_1:62268147-62268166 Msa0742380:intron 30.0%
! TGCTGATTACAACATACAAA+AGG - chr5_1:62268259-62268278 Msa0742380:intron 30.0%
ATACGATCAATAGTATCAGT+AGG + chr5_1:62268377-62268396 None:intergenic 30.0%
TGATACTATTGATCGTATCA+AGG - chr5_1:62268379-62268398 Msa0742380:intron 30.0%
!!! CTCCCTCTTTTTTTTATCAT+AGG + chr5_1:62268639-62268658 None:intergenic 30.0%
AGGTAGTATTTATGCAGATT+TGG - chr5_1:62268792-62268811 Msa0742380:intron 30.0%
TTGATCTAACATACTTGCAT+CGG + chr5_1:62268828-62268847 None:intergenic 30.0%
GCAAGTATGTTAGATCAATA+AGG - chr5_1:62268830-62268849 Msa0742380:intron 30.0%
! AGATTCATAGGAACTAGTTT+AGG + chr5_1:62268904-62268923 None:intergenic 30.0%
TAAACTAGTTCCTATGAATC+TGG - chr5_1:62268903-62268922 Msa0742380:intron 30.0%
AAACTAGTTCCTATGAATCT+GGG - chr5_1:62268904-62268923 Msa0742380:intron 30.0%
AGATTAACCATTACAATAGC+TGG + chr5_1:62269041-62269060 None:intergenic 30.0%
AGCTATTGTAATGGTTAATC+TGG - chr5_1:62269040-62269059 Msa0742380:intron 30.0%
! TAATGGTTAATCTGGATTAG+TGG - chr5_1:62269048-62269067 Msa0742380:intron 30.0%
! ATCAACTGTTCTCTTTTATC+TGG + chr5_1:62269239-62269258 None:intergenic 30.0%
AGATAAAAGAGAACAGTTGA+TGG - chr5_1:62269238-62269257 Msa0742380:intron 30.0%
CAATTAAATTATGCACCTTG+AGG - chr5_1:62269293-62269312 Msa0742380:intron 30.0%
AATATTCACCTTTATCCTCA+AGG + chr5_1:62269311-62269330 None:intergenic 30.0%
TTGAGGATAAAGGTGAATAT+TGG - chr5_1:62269310-62269329 Msa0742380:intron 30.0%
TGAGGATAAAGGTGAATATT+GGG - chr5_1:62269311-62269330 Msa0742380:intron 30.0%
ATAAAGGTGAATATTGGGTA+GGG - chr5_1:62269316-62269335 Msa0742380:intron 30.0%
TGAGGTTTATTTAGCTAGTT+TGG - chr5_1:62269366-62269385 Msa0742380:intron 30.0%
TCTCATCTTAACAAAATCAC+AGG + chr5_1:62269422-62269441 None:intergenic 30.0%
TAGTAAGAAGAAATACATGG+GGG - chr5_1:62269442-62269461 Msa0742380:intron 30.0%
! GTTTGAGATAAGTGTTGTTA+AGG - chr5_1:62269481-62269500 Msa0742380:intron 30.0%
GTTGCCTATGATTAAGAAAA+GGG - chr5_1:62269604-62269623 Msa0742380:intron 30.0%
!! ATTTTGGGTCTAGTAGAATT+GGG - chr5_1:62269639-62269658 Msa0742380:intron 30.0%
! TTTTATCGCTTGAATATCCA+GGG - chr5_1:62269676-62269695 Msa0742380:intron 30.0%
TTATACAGGTATCATTGAGT+TGG - chr5_1:62269789-62269808 Msa0742380:intron 30.0%
GAGTTGGATTGCATATTTAT+TGG - chr5_1:62269805-62269824 Msa0742380:intron 30.0%
TTCGATCTCAAGAAATTAGT+TGG - chr5_1:62270170-62270189 Msa0742380:CDS 30.0%
! TGATTGTTCTTTTATGTGCT+TGG - chr5_1:62270281-62270300 Msa0742380:five_prime_UTR 30.0%
AACTATAACCACAAGTACAA+TGG - chr5_1:62270387-62270406 Msa0742380:five_prime_UTR 30.0%
!!! TGTTTTTAGTTCGAGTGATG+CGG + chr5_1:62267800-62267819 None:intergenic 35.0%
ATCTTTGTGAAGACTTTGAC+CGG - chr5_1:62267922-62267941 Msa0742380:three_prime_UTR 35.0%
AAAAAGGGGAATAACTAACC+TGG + chr5_1:62268008-62268027 None:intergenic 35.0%
GATTATTATGGGTGTGTGTT+TGG - chr5_1:62268094-62268113 Msa0742380:intron 35.0%
!!! CTAGTTTTGGTATACGATGA+TGG - chr5_1:62268123-62268142 Msa0742380:intron 35.0%
! GATTTTTGCTGGTAAGCAAT+TGG - chr5_1:62268220-62268239 Msa0742380:intron 35.0%
AAAGGAATCAACACTTCACT+TGG - chr5_1:62268277-62268296 Msa0742380:intron 35.0%
GAACGTGTTGAAGAAAAAGA+GGG - chr5_1:62268401-62268420 Msa0742380:intron 35.0%
AAAAAAAAGAGGGAGTCTTG+TGG - chr5_1:62268644-62268663 Msa0742380:intron 35.0%
! CTCAATCTGAACTAGTTTCT+AGG - chr5_1:62268715-62268734 Msa0742380:intron 35.0%
! AGAATTTTGCCCAGATTCAT+AGG + chr5_1:62268916-62268935 None:intergenic 35.0%
TCTTGAGGGGTTATAGAATA+TGG + chr5_1:62268942-62268961 None:intergenic 35.0%
TTAACCATTACAATAGCTGG+AGG + chr5_1:62269038-62269057 None:intergenic 35.0%
!!! TTTTTTAGGGCTCAGTTTGT+TGG + chr5_1:62269162-62269181 None:intergenic 35.0%
ATTATGCACCTTGAGGATAA+AGG - chr5_1:62269300-62269319 Msa0742380:intron 35.0%
GATAAAGGTGAATATTGGGT+AGG - chr5_1:62269315-62269334 Msa0742380:intron 35.0%
TAAAGGTGAATATTGGGTAG+GGG - chr5_1:62269317-62269336 Msa0742380:intron 35.0%
!! GTATTGATAGGTCTGTTTTG+AGG - chr5_1:62269348-62269367 Msa0742380:intron 35.0%
AGTAAGAAGAAATACATGGG+GGG - chr5_1:62269443-62269462 Msa0742380:intron 35.0%
! GATAAGTGTTGTTAAGGAGT+TGG - chr5_1:62269487-62269506 Msa0742380:intron 35.0%
CGTTGCCTATGATTAAGAAA+AGG - chr5_1:62269603-62269622 Msa0742380:intron 35.0%
! AACGCCCTTTTCTTAATCAT+AGG + chr5_1:62269611-62269630 None:intergenic 35.0%
!! CATTTTGGGTCTAGTAGAAT+TGG - chr5_1:62269638-62269657 Msa0742380:intron 35.0%
! CTTTTATCGCTTGAATATCC+AGG - chr5_1:62269675-62269694 Msa0742380:intron 35.0%
TGCACTCTTATGATAGAAAC+TGG + chr5_1:62269742-62269761 None:intergenic 35.0%
TTCACTGAACAAAGCATGAA+TGG - chr5_1:62269951-62269970 Msa0742380:intron 35.0%
! AGCTAAAGAGTACAACATTG+AGG - chr5_1:62270084-62270103 Msa0742380:intron 35.0%
! GCTAAAGAGTACAACATTGA+GGG - chr5_1:62270085-62270104 Msa0742380:intron 35.0%
TCTGAACCTAAAGACATGAA+AGG - chr5_1:62270230-62270249 Msa0742380:five_prime_UTR 35.0%
!!! TTTTTAGTTCGAGTGATGCG+GGG + chr5_1:62267798-62267817 None:intergenic 40.0%
!!! GTTTTTAGTTCGAGTGATGC+GGG + chr5_1:62267799-62267818 None:intergenic 40.0%
TCGAGAAGAAAGAACTCTCT+TGG - chr5_1:62267879-62267898 Msa0742380:three_prime_UTR 40.0%
CGAGAAGAAAGAACTCTCTT+GGG - chr5_1:62267880-62267899 Msa0742380:three_prime_UTR 40.0%
GAGAAGAAAGAACTCTCTTG+GGG - chr5_1:62267881-62267900 Msa0742380:three_prime_UTR 40.0%
GGAATAACTAACCTGGATCT+TGG + chr5_1:62268001-62268020 None:intergenic 40.0%
! TAACTGGTGCTTGTGGTTTT+AGG - chr5_1:62268163-62268182 Msa0742380:intron 40.0%
!!! TTGTGGTTTTAGGACAAGGA+AGG - chr5_1:62268173-62268192 Msa0742380:intron 40.0%
GGAACGTGTTGAAGAAAAAG+AGG - chr5_1:62268400-62268419 Msa0742380:intron 40.0%
AACTCCTCCAGCTATTGTAA+TGG - chr5_1:62269031-62269050 Msa0742380:intron 40.0%
!! AGTTTTGCATCTAGAGCGAA+AGG - chr5_1:62269100-62269119 Msa0742380:intron 40.0%
! AAGTGTTGTTAAGGAGTTGG+AGG - chr5_1:62269490-62269509 Msa0742380:intron 40.0%
CAGAAAGTTATGTAGATCCC+TGG + chr5_1:62269696-62269715 None:intergenic 40.0%
! AAAGAGTACAACATTGAGGG+TGG - chr5_1:62270088-62270107 Msa0742380:intron 40.0%
TTGAGGGGTGGTAATTAGTA+AGG - chr5_1:62270136-62270155 Msa0742380:CDS 40.0%
!! GTTGGTCACTTTCTAGTTCT+TGG - chr5_1:62270188-62270207 Msa0742380:CDS 40.0%
GAGCTTCCTTTCATGTCTTT+AGG + chr5_1:62270239-62270258 None:intergenic 40.0%
AGAACAATCATGTCCTCAGA+TGG + chr5_1:62270271-62270290 None:intergenic 40.0%
AACTCTCACCATTGTACTTG+TGG + chr5_1:62270398-62270417 None:intergenic 40.0%
GTGATTCTAACTGGTGCTTG+TGG - chr5_1:62268156-62268175 Msa0742380:intron 45.0%
!!! GTGCTTGTGGTTTTAGGACA+AGG - chr5_1:62268169-62268188 Msa0742380:intron 45.0%
AAAATCAACCTCTGCTGGTC+AGG + chr5_1:62268206-62268225 None:intergenic 45.0%
CAGCAAAAATCAACCTCTGC+TGG + chr5_1:62268211-62268230 None:intergenic 45.0%
!! CAGCAGAGGTTGATTTTTGC+TGG - chr5_1:62268209-62268228 Msa0742380:intron 45.0%
GCTGGTAAGCAATTGGAAGA+TGG - chr5_1:62268227-62268246 Msa0742380:intron 45.0%
CAACACTTCACTTGGTCCTT+AGG - chr5_1:62268285-62268304 Msa0742380:intron 45.0%
TTCACTTGGTCCTTAGGCTT+AGG - chr5_1:62268291-62268310 Msa0742380:intron 45.0%
TCACTTGGTCCTTAGGCTTA+GGG - chr5_1:62268292-62268311 Msa0742380:intron 45.0%
!! AGGGCTCAGTTTGTTGGTAA+AGG + chr5_1:62269156-62269175 None:intergenic 45.0%
GTGAATATTGGGTAGGGGTA+GGG - chr5_1:62269322-62269341 Msa0742380:intron 45.0%
AAGAAGAAATACATGGGGGG+TGG - chr5_1:62269446-62269465 Msa0742380:intron 45.0%
AGAAGAAATACATGGGGGGT+GGG - chr5_1:62269447-62269466 Msa0742380:intron 45.0%
!!! AGGGCGTTGAGAAGTCATTT+TGG - chr5_1:62269623-62269642 Msa0742380:intron 45.0%
!!! GGGCGTTGAGAAGTCATTTT+GGG - chr5_1:62269624-62269643 Msa0742380:intron 45.0%
GTCTAGTAGAATTGGGACCA+GGG - chr5_1:62269646-62269665 Msa0742380:intron 45.0%
TCTAGTAGAATTGGGACCAG+GGG - chr5_1:62269647-62269666 Msa0742380:intron 45.0%
!! TTCACTTGGTGCTTGCATTG+AGG - chr5_1:62270119-62270138 Msa0742380:intron 45.0%
!! TCACTTGGTGCTTGCATTGA+GGG - chr5_1:62270120-62270139 Msa0742380:intron 45.0%
!!! ATAAAAAATGTTTTTTTTTA+GGG + chr5_1:62269175-62269194 None:intergenic 5.0%
!!! AATAAAAAATGTTTTTTTTT+AGG + chr5_1:62269176-62269195 None:intergenic 5.0%
! TGCGGGGAGTATGGGTAATT+GGG + chr5_1:62267782-62267801 None:intergenic 50.0%
! ATGCGGGGAGTATGGGTAAT+TGG + chr5_1:62267783-62267802 None:intergenic 50.0%
CTCGAGGGTGATAGTCTTTC+CGG + chr5_1:62267944-62267963 None:intergenic 50.0%
CACTTGGTCCTTAGGCTTAG+GGG - chr5_1:62268293-62268312 Msa0742380:intron 50.0%
GTTTCAAACCTCTGCTGCAC+AGG + chr5_1:62268434-62268453 None:intergenic 50.0%
! TGTCCAACTTGCTCTGCTGT+TGG - chr5_1:62268983-62269002 Msa0742380:intron 50.0%
GCTCTGCTGTTGGAGCAAAT+CGG - chr5_1:62268993-62269012 Msa0742380:intron 50.0%
CTGTTGGAGCAAATCGGCAA+TGG - chr5_1:62268999-62269018 Msa0742380:intron 50.0%
GGTGAATATTGGGTAGGGGT+AGG - chr5_1:62269321-62269340 Msa0742380:intron 50.0%
!! GGGGTAGGGAGAGTATTGAT+AGG - chr5_1:62269336-62269355 Msa0742380:intron 50.0%
TGTTAAGGAGTTGGAGGTCC+AGG - chr5_1:62269496-62269515 Msa0742380:intron 50.0%
GTTAAGGAGTTGGAGGTCCA+GGG - chr5_1:62269497-62269516 Msa0742380:intron 50.0%
TTCTCCTTGCCTTGAAACCC+TGG + chr5_1:62269517-62269536 None:intergenic 50.0%
GGTCTAGTAGAATTGGGACC+AGG - chr5_1:62269645-62269664 Msa0742380:intron 50.0%
CTAGTAGAATTGGGACCAGG+GGG - chr5_1:62269648-62269667 Msa0742380:intron 50.0%
TAGTAGAATTGGGACCAGGG+GGG - chr5_1:62269649-62269668 Msa0742380:intron 50.0%
!! CACTTGGTGCTTGCATTGAG+GGG - chr5_1:62270121-62270140 Msa0742380:intron 50.0%
GCTCTATACTCGTCCATCTG+AGG - chr5_1:62270255-62270274 Msa0742380:five_prime_UTR 50.0%
! TCGAGTGATGCGGGGAGTAT+GGG + chr5_1:62267790-62267809 None:intergenic 55.0%
TTCGAGTGATGCGGGGAGTA+TGG + chr5_1:62267791-62267810 None:intergenic 55.0%
CGGAAAGACTATCACCCTCG+AGG - chr5_1:62267942-62267961 Msa0742380:three_prime_UTR 55.0%
CGACACCATCGACAACGTCA+AGG - chr5_1:62267975-62267994 Msa0742380:exon 55.0%
!! CTTGGCCTTGACGTTGTCGA+TGG + chr5_1:62267983-62268002 None:intergenic 55.0%
CAACGTCAAGGCCAAGATCC+AGG - chr5_1:62267987-62268006 Msa0742380:CDS 55.0%
TCAACCTCTGCTGGTCAGGA+GGG + chr5_1:62268202-62268221 None:intergenic 55.0%
ATCAACCTCTGCTGGTCAGG+AGG + chr5_1:62268203-62268222 None:intergenic 55.0%
TTGGTCCTTAGGCTTAGGGG+AGG - chr5_1:62268296-62268315 Msa0742380:intron 55.0%
TGGTTCCTCCCCTAAGCCTA+AGG + chr5_1:62268304-62268323 None:intergenic 55.0%
GTATTCCACCTGTGCAGCAG+AGG - chr5_1:62268423-62268442 Msa0742380:intron 55.0%
TCAAACCTCTGCTGCACAGG+TGG + chr5_1:62268431-62268450 None:intergenic 55.0%
GCTCCAACAGCAGAGCAAGT+TGG + chr5_1:62268989-62269008 None:intergenic 55.0%
GTTGGAGGTCCAGGGTTTCA+AGG - chr5_1:62269505-62269524 Msa0742380:intron 55.0%
AGGTCCAGGGTTTCAAGGCA+AGG - chr5_1:62269510-62269529 Msa0742380:intron 55.0%
AGTAGAATTGGGACCAGGGG+GGG - chr5_1:62269650-62269669 Msa0742380:intron 55.0%
TGCTGCAGGCTCATCTATGC+TGG - chr5_1:62270037-62270056 Msa0742380:intron 55.0%
! GGGTGGTTCTGTGCTTCACT+TGG - chr5_1:62270105-62270124 Msa0742380:intron 55.0%
! TTGGTGCTTGCATTGAGGGG+TGG - chr5_1:62270124-62270143 Msa0742380:intron 55.0%
GTCGCTGCTCTCAACCTCGA+GGG + chr5_1:62267959-62267978 None:intergenic 60.0%
TGTCGCTGCTCTCAACCTCG+AGG + chr5_1:62267960-62267979 None:intergenic 60.0%
GTATCCCTCCTGACCAGCAG+AGG - chr5_1:62268195-62268214 Msa0742380:intron 60.0%
GTAGAATTGGGACCAGGGGG+GGG - chr5_1:62269651-62269670 Msa0742380:intron 60.0%
AGCGATAAAAGACCCCCCCC+TGG + chr5_1:62269666-62269685 None:intergenic 60.0%
! CACCTGCTGTCACTTGCTGC+AGG - chr5_1:62270023-62270042 Msa0742380:intron 60.0%
AGCCTGCAGCAAGTGACAGC+AGG + chr5_1:62270028-62270047 None:intergenic 60.0%
TGGGGGGTGGGTAGTGCAAC+TGG - chr5_1:62269459-62269478 Msa0742380:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62267701 62270434 62267701 ID=Msa0742380;Name=Msa0742380
chr5_1 mRNA 62267701 62270434 62267701 ID=Msa0742380-mRNA-1;Parent=Msa0742380;Name=Msa0742380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=215|0.5|0.66|1|1|1|3|281|90
chr5_1 exon 62267701 62268090 62267701 ID=Msa0742380-mRNA-1:exon:18272;Parent=Msa0742380-mRNA-1
chr5_1 exon 62269691 62269761 62269691 ID=Msa0742380-mRNA-1:exon:18271;Parent=Msa0742380-mRNA-1
chr5_1 exon 62270127 62270434 62270127 ID=Msa0742380-mRNA-1:exon:18270;Parent=Msa0742380-mRNA-1
chr5_1 five_prime_UTR 62270220 62270434 62270220 ID=Msa0742380-mRNA-1:five_prime_utr;Parent=Msa0742380-mRNA-1
chr5_1 CDS 62270127 62270219 62270127 ID=Msa0742380-mRNA-1:cds;Parent=Msa0742380-mRNA-1
chr5_1 CDS 62269691 62269761 62269691 ID=Msa0742380-mRNA-1:cds;Parent=Msa0742380-mRNA-1
chr5_1 CDS 62267982 62268090 62267982 ID=Msa0742380-mRNA-1:cds;Parent=Msa0742380-mRNA-1
chr5_1 three_prime_UTR 62267701 62267981 62267701 ID=Msa0742380-mRNA-1:three_prime_utr;Parent=Msa0742380-mRNA-1
Gene Sequence

>Msa0742380

ATGCAGATCTTTGTGAAGACTTTGACCGGAAAGACTATCACCCTCGAGGTTGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGCCTACTGATACTATTGATCGTATCAAGGAACGTGTTGAAGAAAAAGAGGGTATTCCACCTGTGCAGCAGAGGCTCATCTATGCTGGTAAGCAGCTTGCTGATGACAAAACAGCTAAAGAGTACAACATTGAGGGTGGTTCTGTGCTTCACTTGGTGCTTGCATTGAGGGGTGGTAATTAG
Protein sequence

>Msa0742380

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGN*