Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311960 | XP_003626976.1 | 92.340 | 235 | 17 | 1 | 1 | 235 | 1 | 234 | 8.43e-121 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311960 | G7LFV6 | 92.340 | 235 | 17 | 1 | 1 | 235 | 1 | 234 | 4.03e-121 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1311960 | -0.808716 | 2.701996e-50 | -8.615850e-47 |
| Msa0002490 | Msa1311960 | 0.809965 | 1.457602e-50 | -8.615850e-47 |
| Msa0016670 | Msa1311960 | 0.804114 | 2.522949e-49 | -8.615850e-47 |
| Msa0022310 | Msa1311960 | 0.802066 | 6.690526e-49 | -8.615850e-47 |
| Msa0029540 | Msa1311960 | -0.802652 | 5.068935e-49 | -8.615850e-47 |
| Msa0030280 | Msa1311960 | 0.818243 | 2.170095e-52 | -8.615850e-47 |
| Msa0032370 | Msa1311960 | 0.802907 | 4.490456e-49 | -8.615850e-47 |
| Msa0039250 | Msa1311960 | 0.802040 | 6.775432e-49 | -8.615850e-47 |
| Msa0040690 | Msa1311960 | 0.801858 | 7.385542e-49 | -8.615850e-47 |
| Msa0044020 | Msa1311960 | 0.806884 | 6.620769e-50 | -8.615850e-47 |
| Msa0045490 | Msa1311960 | 0.833332 | 5.668187e-56 | -8.615850e-47 |
| Msa0048000 | Msa1311960 | 0.810532 | 1.099995e-50 | -8.615850e-47 |
| Msa0052680 | Msa1311960 | 0.810374 | 1.189752e-50 | -8.615850e-47 |
| Msa0052730 | Msa1311960 | 0.803755 | 2.996847e-49 | -8.615850e-47 |
| Msa0076000 | Msa1311960 | 0.814012 | 1.912992e-51 | -8.615850e-47 |
| Msa0077880 | Msa1311960 | 0.833096 | 6.488974e-56 | -8.615850e-47 |
| Msa0094120 | Msa1311960 | 0.806340 | 8.628067e-50 | -8.615850e-47 |
| Msa0100000 | Msa1311960 | 0.805531 | 1.276090e-49 | -8.615850e-47 |
| Msa0109900 | Msa1311960 | 0.811765 | 5.944713e-51 | -8.615850e-47 |
| Msa0118000 | Msa1311960 | 0.800100 | 1.688600e-48 | -8.615850e-47 |
| Msa0619470 | Msa1311960 | 0.821181 | 4.627813e-53 | -8.615850e-47 |
| Msa0619510 | Msa1311960 | 0.807608 | 4.650961e-50 | -8.615850e-47 |
| Msa0638070 | Msa1311960 | 0.816995 | 4.148266e-52 | -8.615850e-47 |
| Msa0641140 | Msa1311960 | 0.824156 | 9.400085e-54 | -8.615850e-47 |
| Msa0643180 | Msa1311960 | 0.809691 | 1.669860e-50 | -8.615850e-47 |
| Msa0648520 | Msa1311960 | 0.822707 | 2.051122e-53 | -8.615850e-47 |
| Msa0652450 | Msa1311960 | 0.814096 | 1.833192e-51 | -8.615850e-47 |
| Msa0659600 | Msa1311960 | 0.807131 | 5.872397e-50 | -8.615850e-47 |
| Msa0664910 | Msa1311960 | 0.808564 | 2.911735e-50 | -8.615850e-47 |
| Msa0679680 | Msa1311960 | 0.831611 | 1.513566e-55 | -8.615850e-47 |
| Msa0682330 | Msa1311960 | 0.816143 | 6.437134e-52 | -8.615850e-47 |
| Msa0682900 | Msa1311960 | 0.812429 | 4.259793e-51 | -8.615850e-47 |
| Msa0684500 | Msa1311960 | 0.827852 | 1.244149e-54 | -8.615850e-47 |
| Msa0691050 | Msa1311960 | 0.845163 | 4.821352e-59 | -8.615850e-47 |
| Msa0693380 | Msa1311960 | 0.843837 | 1.096283e-58 | -8.615850e-47 |
| Msa0698060 | Msa1311960 | 0.806197 | 9.247703e-50 | -8.615850e-47 |
| Msa0701280 | Msa1311960 | 0.822270 | 2.592052e-53 | -8.615850e-47 |
| Msa0708520 | Msa1311960 | 0.807007 | 6.237328e-50 | -8.615850e-47 |
| Msa0743730 | Msa1311960 | 0.811779 | 5.902827e-51 | -8.615850e-47 |
| Msa0744030 | Msa1311960 | 0.825955 | 3.533802e-54 | -8.615850e-47 |
| Msa0744040 | Msa1311960 | 0.837317 | 5.581621e-57 | -8.615850e-47 |
| Msa0744090 | Msa1311960 | 0.808013 | 3.814872e-50 | -8.615850e-47 |
| Msa0744100 | Msa1311960 | 0.807505 | 4.892908e-50 | -8.615850e-47 |
| Msa0750880 | Msa1311960 | 0.811285 | 7.555847e-51 | -8.615850e-47 |
| Msa0754720 | Msa1311960 | -0.812134 | 4.938518e-51 | -8.615850e-47 |
| Msa0756530 | Msa1311960 | 0.805932 | 1.051370e-49 | -8.615850e-47 |
| Msa0760380 | Msa1311960 | 0.805116 | 1.559164e-49 | -8.615850e-47 |
| Msa0761940 | Msa1311960 | 0.817020 | 4.094415e-52 | -8.615850e-47 |
| Msa0784060 | Msa1311960 | 0.803098 | 4.099485e-49 | -8.615850e-47 |
| Msa0787260 | Msa1311960 | 0.801016 | 1.098369e-48 | -8.615850e-47 |
| Msa0788110 | Msa1311960 | 0.810069 | 1.384241e-50 | -8.615850e-47 |
| Msa0804680 | Msa1311960 | 0.804182 | 2.442824e-49 | -8.615850e-47 |
| Msa0816710 | Msa1311960 | 0.802414 | 5.673520e-49 | -8.615850e-47 |
| Msa0824660 | Msa1311960 | 0.806120 | 9.598491e-50 | -8.615850e-47 |
| Msa0825280 | Msa1311960 | 0.813073 | 3.078960e-51 | -8.615850e-47 |
| Msa0825340 | Msa1311960 | 0.813996 | 1.928583e-51 | -8.615850e-47 |
| Msa0828850 | Msa1311960 | 0.804398 | 2.201984e-49 | -8.615850e-47 |
| Msa0838260 | Msa1311960 | 0.808854 | 2.523708e-50 | -8.615850e-47 |
| Msa0123100 | Msa1311960 | 0.800588 | 1.343324e-48 | -8.615850e-47 |
| Msa0124340 | Msa1311960 | 0.814374 | 1.591628e-51 | -8.615850e-47 |
| Msa0125770 | Msa1311960 | 0.825609 | 4.269330e-54 | -8.615850e-47 |
| Msa0133720 | Msa1311960 | 0.810872 | 9.285203e-51 | -8.615850e-47 |
| Msa0138970 | Msa1311960 | -0.807477 | 4.960408e-50 | -8.615850e-47 |
| Msa0141340 | Msa1311960 | 0.818857 | 1.574975e-52 | -8.615850e-47 |
| Msa0142950 | Msa1311960 | 0.806633 | 7.481961e-50 | -8.615850e-47 |
| Msa0146260 | Msa1311960 | 0.804422 | 2.176539e-49 | -8.615850e-47 |
| Msa0156230 | Msa1311960 | 0.811496 | 6.801657e-51 | -8.615850e-47 |
| Msa0170410 | Msa1311960 | 0.807158 | 5.794572e-50 | -8.615850e-47 |
| Msa0170570 | Msa1311960 | 0.814274 | 1.674397e-51 | -8.615850e-47 |
| Msa0181230 | Msa1311960 | 0.810690 | 1.016758e-50 | -8.615850e-47 |
| Msa0185590 | Msa1311960 | 0.825889 | 3.664204e-54 | -8.615850e-47 |
| Msa0188150 | Msa1311960 | 0.806293 | 8.826039e-50 | -8.615850e-47 |
| Msa0197520 | Msa1311960 | 0.800397 | 1.469241e-48 | -8.615850e-47 |
| Msa0198520 | Msa1311960 | 0.811526 | 6.698020e-51 | -8.615850e-47 |
| Msa0198530 | Msa1311960 | 0.818193 | 2.226672e-52 | -8.615850e-47 |
| Msa0204980 | Msa1311960 | 0.800432 | 1.445412e-48 | -8.615850e-47 |
| Msa0205850 | Msa1311960 | 0.812661 | 3.789594e-51 | -8.615850e-47 |
| Msa0216240 | Msa1311960 | 0.818219 | 2.197764e-52 | -8.615850e-47 |
| Msa0222920 | Msa1311960 | 0.831192 | 1.919267e-55 | -8.615850e-47 |
| Msa0225740 | Msa1311960 | 0.810368 | 1.193543e-50 | -8.615850e-47 |
| Msa0226470 | Msa1311960 | 0.803042 | 4.210779e-49 | -8.615850e-47 |
| Msa0227400 | Msa1311960 | 0.827895 | 1.214773e-54 | -8.615850e-47 |
| Msa1231240 | Msa1311960 | 0.926364 | 5.188529e-91 | -8.615850e-47 |
| Msa1231550 | Msa1311960 | 0.828229 | 1.009615e-54 | -8.615850e-47 |
| Msa1235740 | Msa1311960 | 0.802932 | 4.436229e-49 | -8.615850e-47 |
| Msa1242240 | Msa1311960 | 0.801120 | 1.045818e-48 | -8.615850e-47 |
| Msa1252190 | Msa1311960 | 0.807838 | 4.156080e-50 | -8.615850e-47 |
| Msa1274060 | Msa1311960 | 0.800072 | 1.711140e-48 | -8.615850e-47 |
| Msa1283840 | Msa1311960 | 0.809003 | 2.344780e-50 | -8.615850e-47 |
| Msa1284260 | Msa1311960 | 0.809170 | 2.159385e-50 | -8.615850e-47 |
| Msa1292830 | Msa1311960 | 0.812131 | 4.947973e-51 | -8.615850e-47 |
| Msa1295910 | Msa1311960 | 0.806962 | 6.376952e-50 | -8.615850e-47 |
| Msa1303250 | Msa1311960 | 0.801516 | 8.678026e-49 | -8.615850e-47 |
| Msa1311960 | Msa1327050 | 0.810024 | 1.415990e-50 | -8.615850e-47 |
| Msa1311960 | Msa1331590 | 0.808676 | 2.755565e-50 | -8.615850e-47 |
| Msa1311960 | Msa1331910 | 0.818156 | 2.270347e-52 | -8.615850e-47 |
| Msa1311960 | Msa1331920 | 0.801469 | 8.874404e-49 | -8.615850e-47 |
| Msa1311960 | Msa1341570 | 0.825109 | 5.608687e-54 | -8.615850e-47 |
| Msa1311960 | Msa1343070 | 0.804296 | 2.312522e-49 | -8.615850e-47 |
| Msa1311960 | Msa1346370 | 0.819125 | 1.368520e-52 | -8.615850e-47 |
| Msa1311960 | Msa1348880 | 0.819299 | 1.249508e-52 | -8.615850e-47 |
| Msa1311960 | Msa1353060 | 0.815171 | 1.059965e-51 | -8.615850e-47 |
| Msa1311960 | Msa1353470 | 0.810501 | 1.117270e-50 | -8.615850e-47 |
| Msa1311960 | Msa1361410 | 0.809342 | 1.984282e-50 | -8.615850e-47 |
| Msa1311960 | Msa1366600 | 0.812882 | 3.390477e-51 | -8.615850e-47 |
| Msa1311960 | Msa1368430 | 0.812993 | 3.205170e-51 | -8.615850e-47 |
| Msa1311960 | Msa1371640 | 0.829875 | 4.030347e-55 | -8.615850e-47 |
| Msa1311960 | Msa1374040 | 0.802081 | 6.645691e-49 | -8.615850e-47 |
| Msa1311960 | Msa1376200 | 0.833991 | 3.879340e-56 | -8.615850e-47 |
| Msa1311960 | Msa1379850 | 0.817377 | 3.402974e-52 | -8.615850e-47 |
| Msa1311960 | Msa1383230 | 0.816509 | 5.331888e-52 | -8.615850e-47 |
| Msa1311960 | Msa1386230 | 0.800268 | 1.560765e-48 | -8.615850e-47 |
| Msa1311960 | Msa1390230 | 0.822339 | 2.497704e-53 | -8.615850e-47 |
| Msa1311960 | Msa1402270 | 0.815877 | 7.379631e-52 | -8.615850e-47 |
| Msa1311960 | Msa1404540 | 0.820016 | 8.569435e-53 | -8.615850e-47 |
| Msa1311960 | Msa1415940 | 0.817199 | 3.732624e-52 | -8.615850e-47 |
| Msa1311960 | Msa1423350 | 0.817608 | 3.018883e-52 | -8.615850e-47 |
| Msa1311960 | Msa1427060 | 0.813534 | 2.438122e-51 | -8.615850e-47 |
| Msa1311960 | Msa1431060 | 0.809581 | 1.762935e-50 | -8.615850e-47 |
| Msa1311960 | Msa1447110 | 0.805457 | 1.322886e-49 | -8.615850e-47 |
| Msa1311960 | Msa1449910 | 0.807671 | 4.509716e-50 | -8.615850e-47 |
| Msa1311960 | Msa1452120 | 0.803978 | 2.692571e-49 | -8.615850e-47 |
| Msa1311960 | Msa1459180 | 0.802385 | 5.753477e-49 | -8.615850e-47 |
| Msa1311960 | Msa1460020 | 0.815928 | 7.189781e-52 | -8.615850e-47 |
| Msa1311960 | Msa1461300 | 0.814396 | 1.573768e-51 | -8.615850e-47 |
| Msa1311960 | Msa1466090 | 0.815046 | 1.129531e-51 | -8.615850e-47 |
| Msa1311960 | Msa1466460 | 0.800548 | 1.369019e-48 | -8.615850e-47 |
| Msa0366240 | Msa1311960 | 0.804486 | 2.111325e-49 | -8.615850e-47 |
| Msa0369850 | Msa1311960 | 0.822085 | 2.860682e-53 | -8.615850e-47 |
| Msa0376590 | Msa1311960 | 0.804367 | 2.234759e-49 | -8.615850e-47 |
| Msa0414170 | Msa1311960 | 0.810449 | 1.146262e-50 | -8.615850e-47 |
| Msa0414950 | Msa1311960 | -0.807810 | 4.212995e-50 | -8.615850e-47 |
| Msa0415810 | Msa1311960 | 0.824603 | 7.382171e-54 | -8.615850e-47 |
| Msa0423900 | Msa1311960 | 0.819431 | 1.165569e-52 | -8.615850e-47 |
| Msa0428170 | Msa1311960 | 0.801744 | 7.792450e-49 | -8.615850e-47 |
| Msa0436370 | Msa1311960 | 0.818680 | 1.727370e-52 | -8.615850e-47 |
| Msa0460930 | Msa1311960 | 0.809799 | 1.583025e-50 | -8.615850e-47 |
| Msa0470690 | Msa1311960 | 0.804011 | 2.651422e-49 | -8.615850e-47 |
| Msa1014420 | Msa1311960 | 0.808639 | 2.806184e-50 | -8.615850e-47 |
| Msa1024740 | Msa1311960 | 0.830762 | 2.446470e-55 | -8.615850e-47 |
| Msa1027630 | Msa1311960 | 0.816511 | 5.326351e-52 | -8.615850e-47 |
| Msa1031770 | Msa1311960 | 0.811854 | 5.684704e-51 | -8.615850e-47 |
| Msa1035300 | Msa1311960 | 0.803074 | 4.146593e-49 | -8.615850e-47 |
| Msa1040120 | Msa1311960 | 0.801411 | 9.117832e-49 | -8.615850e-47 |
| Msa1040890 | Msa1311960 | 0.804365 | 2.237279e-49 | -8.615850e-47 |
| Msa1041210 | Msa1311960 | 0.803626 | 3.187385e-49 | -8.615850e-47 |
| Msa1041520 | Msa1311960 | 0.825004 | 5.937453e-54 | -8.615850e-47 |
| Msa1052830 | Msa1311960 | 0.808090 | 3.674610e-50 | -8.615850e-47 |
| Msa1055410 | Msa1311960 | 0.804587 | 2.011176e-49 | -8.615850e-47 |
| Msa1070840 | Msa1311960 | 0.807663 | 4.529087e-50 | -8.615850e-47 |
| Msa1080160 | Msa1311960 | 0.818825 | 1.601000e-52 | -8.615850e-47 |
| Msa1081560 | Msa1311960 | 0.834050 | 3.750620e-56 | -8.615850e-47 |
| Msa1082500 | Msa1311960 | 0.811387 | 7.180500e-51 | -8.615850e-47 |
| Msa1083210 | Msa1311960 | 0.812736 | 3.648704e-51 | -8.615850e-47 |
| Msa1084260 | Msa1311960 | 0.802800 | 4.723075e-49 | -8.615850e-47 |
| Msa1102770 | Msa1311960 | 0.843226 | 1.596304e-58 | -8.615850e-47 |
| Msa0239510 | Msa1311960 | 0.811762 | 5.951445e-51 | -8.615850e-47 |
| Msa0241190 | Msa1311960 | 0.817580 | 3.063764e-52 | -8.615850e-47 |
| Msa0259270 | Msa1311960 | 0.801686 | 8.007543e-49 | -8.615850e-47 |
| Msa0260810 | Msa1311960 | 0.816244 | 6.110877e-52 | -8.615850e-47 |
| Msa0264780 | Msa1311960 | 0.819117 | 1.374119e-52 | -8.615850e-47 |
| Msa0270100 | Msa1311960 | 0.802721 | 4.905834e-49 | -8.615850e-47 |
| Msa0276920 | Msa1311960 | 0.838115 | 3.483182e-57 | -8.615850e-47 |
| Msa0278790 | Msa1311960 | 0.828724 | 7.667957e-55 | -8.615850e-47 |
| Msa0287650 | Msa1311960 | 0.812750 | 3.623092e-51 | -8.615850e-47 |
| Msa0316800 | Msa1311960 | 0.803334 | 3.663036e-49 | -8.615850e-47 |
| Msa0316910 | Msa1311960 | 0.804324 | 2.281630e-49 | -8.615850e-47 |
| Msa0317730 | Msa1311960 | 0.816890 | 4.378473e-52 | -8.615850e-47 |
| Msa0318720 | Msa1311960 | 0.840225 | 9.886960e-58 | -8.615850e-47 |
| Msa0328070 | Msa1311960 | 0.818782 | 1.637951e-52 | -8.615850e-47 |
| Msa0334040 | Msa1311960 | 0.818027 | 2.428925e-52 | -8.615850e-47 |
| Msa0334350 | Msa1311960 | 0.815462 | 9.129966e-52 | -8.615850e-47 |
| Msa0334360 | Msa1311960 | 0.806134 | 9.533094e-50 | -8.615850e-47 |
| Msa1108790 | Msa1311960 | 0.814766 | 1.303415e-51 | -8.615850e-47 |
| Msa1118760 | Msa1311960 | 0.807465 | 4.988286e-50 | -8.615850e-47 |
| Msa1124310 | Msa1311960 | 0.814014 | 1.910945e-51 | -8.615850e-47 |
| Msa1125470 | Msa1311960 | 0.800958 | 1.128704e-48 | -8.615850e-47 |
| Msa1127130 | Msa1311960 | 0.828974 | 6.671323e-55 | -8.615850e-47 |
| Msa1127830 | Msa1311960 | 0.809014 | 2.332822e-50 | -8.615850e-47 |
| Msa1127890 | Msa1311960 | 0.813745 | 2.190823e-51 | -8.615850e-47 |
| Msa1130270 | Msa1311960 | -0.805303 | 1.424666e-49 | -8.615850e-47 |
| Msa1139890 | Msa1311960 | 0.805998 | 1.018316e-49 | -8.615850e-47 |
| Msa1140690 | Msa1311960 | 0.800507 | 1.395089e-48 | -8.615850e-47 |
| Msa1147900 | Msa1311960 | 0.818882 | 1.554163e-52 | -8.615850e-47 |
| Msa1152510 | Msa1311960 | 0.835894 | 1.286024e-56 | -8.615850e-47 |
| Msa1158660 | Msa1311960 | 0.822453 | 2.349503e-53 | -8.615850e-47 |
| Msa1166410 | Msa1311960 | 0.837783 | 4.239756e-57 | -8.615850e-47 |
| Msa1174100 | Msa1311960 | 0.820576 | 6.377425e-53 | -8.615850e-47 |
| Msa1205370 | Msa1311960 | 0.801218 | 9.988690e-49 | -8.615850e-47 |
| Msa1214880 | Msa1311960 | 0.803501 | 3.383314e-49 | -8.615850e-47 |
| Msa1214890 | Msa1311960 | 0.805275 | 1.444067e-49 | -8.615850e-47 |
| Msa1218600 | Msa1311960 | 0.801220 | 9.977885e-49 | -8.615850e-47 |
| Msa1221060 | Msa1311960 | 0.804198 | 2.423952e-49 | -8.615850e-47 |
| Msa0484780 | Msa1311960 | 0.817202 | 3.726634e-52 | -8.615850e-47 |
| Msa0484840 | Msa1311960 | 0.830323 | 3.132278e-55 | -8.615850e-47 |
| Msa0495320 | Msa1311960 | 0.800330 | 1.515990e-48 | -8.615850e-47 |
| Msa0505770 | Msa1311960 | 0.841784 | 3.850727e-58 | -8.615850e-47 |
| Msa0506890 | Msa1311960 | 0.832172 | 1.100064e-55 | -8.615850e-47 |
| Msa0509610 | Msa1311960 | 0.806041 | 9.971610e-50 | -8.615850e-47 |
| Msa0515640 | Msa1311960 | 0.801506 | 8.720942e-49 | -8.615850e-47 |
| Msa0516370 | Msa1311960 | 0.813910 | 2.015444e-51 | -8.615850e-47 |
| Msa0526890 | Msa1311960 | 0.814553 | 1.453317e-51 | -8.615850e-47 |
| Msa0542160 | Msa1311960 | 0.824923 | 6.205621e-54 | -8.615850e-47 |
| Msa0545060 | Msa1311960 | 0.850855 | 1.295994e-60 | -8.615850e-47 |
| Msa0546680 | Msa1311960 | 0.809111 | 2.223619e-50 | -8.615850e-47 |
| Msa0547360 | Msa1311960 | 0.812480 | 4.150112e-51 | -8.615850e-47 |
| Msa0547400 | Msa1311960 | 0.801153 | 1.029642e-48 | -8.615850e-47 |
| Msa0547720 | Msa1311960 | 0.821432 | 4.049846e-53 | -8.615850e-47 |
| Msa0557070 | Msa1311960 | 0.829927 | 3.913873e-55 | -8.615850e-47 |
| Msa0572420 | Msa1311960 | 0.805026 | 1.627848e-49 | -8.615850e-47 |
| Msa0572480 | Msa1311960 | 0.802719 | 4.908806e-49 | -8.615850e-47 |
| Msa0574760 | Msa1311960 | -0.806278 | 8.888898e-50 | -8.615850e-47 |
| Msa0584550 | Msa1311960 | 0.815298 | 9.929750e-52 | -8.615850e-47 |
| Msa0587940 | Msa1311960 | 0.811255 | 7.670226e-51 | -8.615850e-47 |
| Msa0600600 | Msa1311960 | 0.828115 | 1.075538e-54 | -8.615850e-47 |
| Msa0843780 | Msa1311960 | -0.810969 | 8.847420e-51 | -8.615850e-47 |
| Msa0850960 | Msa1311960 | 0.833640 | 4.748795e-56 | -8.615850e-47 |
| Msa0851470 | Msa1311960 | 0.805940 | 1.046998e-49 | -8.615850e-47 |
| Msa0856920 | Msa1311960 | 0.800259 | 1.567372e-48 | -8.615850e-47 |
| Msa0861510 | Msa1311960 | 0.804399 | 2.200637e-49 | -8.615850e-47 |
| Msa0861530 | Msa1311960 | 0.802086 | 6.628873e-49 | -8.615850e-47 |
| Msa0861600 | Msa1311960 | 0.801047 | 1.082667e-48 | -8.615850e-47 |
| Msa0863370 | Msa1311960 | 0.818616 | 1.785858e-52 | -8.615850e-47 |
| Msa0863930 | Msa1311960 | 0.809608 | 1.739581e-50 | -8.615850e-47 |
| Msa0866520 | Msa1311960 | 0.813190 | 2.901463e-51 | -8.615850e-47 |
| Msa0869100 | Msa1311960 | 0.801980 | 6.970146e-49 | -8.615850e-47 |
| Msa0881020 | Msa1311960 | 0.803330 | 3.670600e-49 | -8.615850e-47 |
| Msa0903700 | Msa1311960 | 0.806045 | 9.953986e-50 | -8.615850e-47 |
| Msa0906690 | Msa1311960 | 0.816572 | 5.161609e-52 | -8.615850e-47 |
| Msa0930910 | Msa1311960 | -0.808505 | 2.996448e-50 | -8.615850e-47 |
| Msa0933230 | Msa1311960 | 0.821293 | 4.360244e-53 | -8.615850e-47 |
| Msa0933310 | Msa1311960 | 0.826096 | 3.271206e-54 | -8.615850e-47 |
| Msa0933440 | Msa1311960 | 0.808809 | 2.580885e-50 | -8.615850e-47 |
| Msa0939000 | Msa1311960 | 0.810675 | 1.024557e-50 | -8.615850e-47 |
| Msa0969520 | Msa1311960 | 0.803360 | 3.618106e-49 | -8.615850e-47 |
| Msa0971090 | Msa1311960 | 0.825416 | 4.744660e-54 | -8.615850e-47 |
| Msa0975940 | Msa1311960 | 0.804705 | 1.899929e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311960 | MtrunA17_Chr8g0340131 | 92.340 | 235 | 17 | 1 | 1 | 235 | 1 | 234 | 7.75e-125 | 353 |
| Msa1311960 | MtrunA17_Chr7g0236051 | 48.214 | 112 | 48 | 2 | 124 | 235 | 238 | 339 | 7.51e-28 | 108 |
| Msa1311960 | MtrunA17_Chr4g0075411 | 50.420 | 119 | 51 | 3 | 123 | 235 | 101 | 217 | 1.73e-27 | 104 |
| Msa1311960 | MtrunA17_Chr2g0289321 | 46.610 | 118 | 37 | 3 | 118 | 235 | 122 | 213 | 2.80e-26 | 101 |
| Msa1311960 | MtrunA17_Chr3g0110201 | 47.748 | 111 | 51 | 2 | 125 | 235 | 249 | 352 | 5.18e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311960 | AT3G25030.3 | 35.537 | 242 | 108 | 7 | 3 | 235 | 8 | 210 | 8.25e-37 | 129 |
| Msa1311960 | AT3G25030.1 | 35.659 | 258 | 126 | 8 | 3 | 235 | 8 | 250 | 5.54e-36 | 128 |
| Msa1311960 | AT3G25030.4 | 35.659 | 258 | 126 | 8 | 3 | 235 | 8 | 250 | 5.54e-36 | 128 |
| Msa1311960 | AT3G25030.2 | 35.659 | 258 | 126 | 8 | 3 | 235 | 8 | 250 | 5.54e-36 | 128 |
| Msa1311960 | AT4G13100.5 | 31.673 | 281 | 112 | 6 | 3 | 235 | 8 | 256 | 4.86e-34 | 123 |
| Msa1311960 | AT4G13100.3 | 31.673 | 281 | 112 | 6 | 3 | 235 | 8 | 256 | 4.86e-34 | 123 |
| Msa1311960 | AT4G13100.4 | 31.338 | 284 | 112 | 7 | 3 | 235 | 5 | 256 | 9.34e-33 | 119 |
| Msa1311960 | AT4G13100.8 | 31.338 | 284 | 112 | 7 | 3 | 235 | 8 | 259 | 1.00e-32 | 119 |
| Msa1311960 | AT4G13100.7 | 31.338 | 284 | 112 | 7 | 3 | 235 | 8 | 259 | 1.00e-32 | 119 |
| Msa1311960 | AT4G13100.9 | 31.338 | 284 | 112 | 7 | 3 | 235 | 8 | 259 | 1.00e-32 | 119 |
| Msa1311960 | AT4G13100.1 | 31.338 | 284 | 112 | 7 | 3 | 235 | 8 | 259 | 1.00e-32 | 119 |
| Msa1311960 | AT4G13100.2 | 50.820 | 122 | 42 | 2 | 118 | 235 | 158 | 265 | 1.66e-31 | 116 |
| Msa1311960 | AT4G03965.1 | 56.627 | 83 | 33 | 1 | 156 | 235 | 127 | 209 | 5.19e-27 | 103 |
| Msa1311960 | AT4G22250.1 | 58.025 | 81 | 33 | 1 | 156 | 235 | 134 | 214 | 3.07e-26 | 101 |
| Msa1311960 | AT1G62370.1 | 71.429 | 49 | 14 | 0 | 187 | 235 | 156 | 204 | 1.66e-23 | 94.4 |
| Msa1311960 | AT3G07120.1 | 47.222 | 108 | 51 | 2 | 129 | 235 | 258 | 360 | 3.06e-22 | 94.0 |
Find 38 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGAAAACGGCGTCGTTT+TGG | 0.283292 | 8_4:-8873912 | None:intergenic |
| GATCCGACGGAATTTCTTCC+CGG | 0.365380 | 8_4:+8874162 | Msa1311960:CDS |
| GGAAGAGAGTGAAATTGAAT+TGG | 0.374216 | 8_4:+8874239 | Msa1311960:CDS |
| ACATTAACAACAACGTTGTT+TGG | 0.375493 | 8_4:-8873985 | None:intergenic |
| GAATGTGTTCAAGAGAGCTT+TGG | 0.390646 | 8_4:+8874454 | Msa1311960:CDS |
| GCTGTTATTGTTGTTGTTGT+CGG | 0.397472 | 8_4:-8874016 | None:intergenic |
| CGTAAAGTGTTATTCTTTGA+CGG | 0.401030 | 8_4:-8873840 | None:intergenic |
| GTATAATATCTAAGAGTGTT+TGG | 0.411313 | 8_4:-8873951 | None:intergenic |
| GAAGAAGAGGAAAGAGAAGA+AGG | 0.412992 | 8_4:+8874336 | Msa1311960:CDS |
| AAATTCCGTCGGATCTGAAT+TGG | 0.419938 | 8_4:-8874154 | None:intergenic |
| CATGTCGTTGATGGATTTGT+TGG | 0.421193 | 8_4:+8874218 | Msa1311960:CDS |
| GTGTGTATGGTGAGGGATAA+AGG | 0.427186 | 8_4:+8874396 | Msa1311960:CDS |
| AGGAGAAGGGAGTAATGTTA+AGG | 0.433410 | 8_4:+8874356 | Msa1311960:CDS |
| AAAATCATGGAAAGCTTTCA+AGG | 0.440126 | 8_4:+8874059 | Msa1311960:CDS |
| AATGTGTTCAAGAGAGCTTT+GGG | 0.444478 | 8_4:+8874455 | Msa1311960:CDS |
| GCAGGTTAGCATGTCGTTGA+TGG | 0.473676 | 8_4:+8874209 | Msa1311960:CDS |
| AGGAAAGAGAAGAAGGAGAA+GGG | 0.480424 | 8_4:+8874343 | Msa1311960:CDS |
| GAGGAAAGAGAAGAAGGAGA+AGG | 0.500274 | 8_4:+8874342 | Msa1311960:CDS |
| ACACAATTGTTGCGTGTGTA+TGG | 0.501642 | 8_4:+8874383 | Msa1311960:CDS |
| TTGTTAAAGATCGAAAATCA+TGG | 0.528304 | 8_4:+8874046 | Msa1311960:CDS |
| GCTAACCTGCGCCGTCTCAT+CGG | 0.529102 | 8_4:-8874196 | None:intergenic |
| AGAGAGCTTTGGGTTAGTAG+AGG | 0.548126 | 8_4:+8874465 | Msa1311960:CDS |
| TCATCGGAAAACTCGCCGCC+GGG | 0.552591 | 8_4:-8874180 | None:intergenic |
| AGAAGGGAGTAATGTTAAGG+TGG | 0.555525 | 8_4:+8874359 | Msa1311960:CDS |
| CTCATCGGAAAACTCGCCGC+CGG | 0.561315 | 8_4:-8874181 | None:intergenic |
| CTGCAAAACGTGTGTCCACA+TGG | 0.562500 | 8_4:-8874432 | None:intergenic |
| TGAACTTCTAGTGTTGCTTG+TGG | 0.565142 | 8_4:-8873875 | None:intergenic |
| AGTAGTGACGTTGGTGATGA+AGG | 0.567789 | 8_4:+8874267 | Msa1311960:CDS |
| AAAATAAAATGATTGCAAAG+AGG | 0.605793 | 8_4:-8874495 | None:intergenic |
| TCCGACCAATTCAGATCCGA+CGG | 0.610865 | 8_4:+8874149 | Msa1311960:CDS |
| TTGTTGCGTGTGTATGGTGA+GGG | 0.665548 | 8_4:+8874389 | Msa1311960:CDS |
| CCGCCGGGAAGAAATTCCGT+CGG | 0.673552 | 8_4:-8874165 | None:intergenic |
| TCCGTCGGATCTGAATTGGT+CGG | 0.675352 | 8_4:-8874150 | None:intergenic |
| ATTGTTGCGTGTGTATGGTG+AGG | 0.686096 | 8_4:+8874388 | Msa1311960:CDS |
| GGTGCAGCGTTTATACCATG+TGG | 0.688981 | 8_4:+8874417 | Msa1311960:CDS |
| TCACCAACAACAACAAAACG+AGG | 0.705279 | 8_4:+8874122 | Msa1311960:CDS |
| TGGTGATGAAGGTGATGACG+TGG | 0.717305 | 8_4:+8874278 | Msa1311960:CDS |
| TTGGAACGAAGTAGTGACGT+TGG | 0.731633 | 8_4:+8874258 | Msa1311960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATGATTGCAAAG+AGG | - | chr8_4:8874498-8874517 | None:intergenic | 20.0% |
| !!! | GTATAATATCTAAGAGTGTT+TGG | - | chr8_4:8873954-8873973 | None:intergenic | 25.0% |
| ! | TTGTTAAAGATCGAAAATCA+TGG | + | chr8_4:8874046-8874065 | Msa1311960:CDS | 25.0% |
| ! | CGTAAAGTGTTATTCTTTGA+CGG | - | chr8_4:8873843-8873862 | None:intergenic | 30.0% |
| !!! | GTTTTTTTGGTTGGAGAAAA+CGG | - | chr8_4:8873926-8873945 | None:intergenic | 30.0% |
| !!! | TTGGTTTGTGTTTTTTTGGT+TGG | - | chr8_4:8873935-8873954 | None:intergenic | 30.0% |
| !!! | GTGTTTGGTTTGTGTTTTTT+TGG | - | chr8_4:8873939-8873958 | None:intergenic | 30.0% |
| ACATTAACAACAACGTTGTT+TGG | - | chr8_4:8873988-8874007 | None:intergenic | 30.0% | |
| AAAATCATGGAAAGCTTTCA+AGG | + | chr8_4:8874059-8874078 | Msa1311960:CDS | 30.0% | |
| AGAAGAAGAAAAAGAAGAAG+AGG | + | chr8_4:8874323-8874342 | Msa1311960:CDS | 30.0% | |
| ! | GCTGTTATTGTTGTTGTTGT+CGG | - | chr8_4:8874019-8874038 | None:intergenic | 35.0% |
| !!! | TATCCTCGTTTTGTTGTTGT+TGG | - | chr8_4:8874128-8874147 | None:intergenic | 35.0% |
| GGAAGAGAGTGAAATTGAAT+TGG | + | chr8_4:8874239-8874258 | Msa1311960:CDS | 35.0% | |
| AATGTGTTCAAGAGAGCTTT+GGG | + | chr8_4:8874455-8874474 | Msa1311960:CDS | 35.0% | |
| !! | TGAACTTCTAGTGTTGCTTG+TGG | - | chr8_4:8873878-8873897 | None:intergenic | 40.0% |
| TCACCAACAACAACAAAACG+AGG | + | chr8_4:8874122-8874141 | Msa1311960:CDS | 40.0% | |
| AAATTCCGTCGGATCTGAAT+TGG | - | chr8_4:8874157-8874176 | None:intergenic | 40.0% | |
| !! | CATGTCGTTGATGGATTTGT+TGG | + | chr8_4:8874218-8874237 | Msa1311960:CDS | 40.0% |
| GAAGAAGAGGAAAGAGAAGA+AGG | + | chr8_4:8874336-8874355 | Msa1311960:CDS | 40.0% | |
| AGGAAAGAGAAGAAGGAGAA+GGG | + | chr8_4:8874343-8874362 | Msa1311960:CDS | 40.0% | |
| AGGAGAAGGGAGTAATGTTA+AGG | + | chr8_4:8874356-8874375 | Msa1311960:CDS | 40.0% | |
| AGAAGGGAGTAATGTTAAGG+TGG | + | chr8_4:8874359-8874378 | Msa1311960:CDS | 40.0% | |
| ACACAATTGTTGCGTGTGTA+TGG | + | chr8_4:8874383-8874402 | Msa1311960:CDS | 40.0% | |
| GAATGTGTTCAAGAGAGCTT+TGG | + | chr8_4:8874454-8874473 | Msa1311960:CDS | 40.0% | |
| TTGGAACGAAGTAGTGACGT+TGG | + | chr8_4:8874258-8874277 | Msa1311960:CDS | 45.0% | |
| !! | AGTAGTGACGTTGGTGATGA+AGG | + | chr8_4:8874267-8874286 | Msa1311960:CDS | 45.0% |
| GAGGAAAGAGAAGAAGGAGA+AGG | + | chr8_4:8874342-8874361 | Msa1311960:CDS | 45.0% | |
| ATTGTTGCGTGTGTATGGTG+AGG | + | chr8_4:8874388-8874407 | Msa1311960:CDS | 45.0% | |
| TTGTTGCGTGTGTATGGTGA+GGG | + | chr8_4:8874389-8874408 | Msa1311960:CDS | 45.0% | |
| GTGTGTATGGTGAGGGATAA+AGG | + | chr8_4:8874396-8874415 | Msa1311960:CDS | 45.0% | |
| !! | AGAGAGCTTTGGGTTAGTAG+AGG | + | chr8_4:8874465-8874484 | Msa1311960:CDS | 45.0% |
| ! | TGGAGAAAACGGCGTCGTTT+TGG | - | chr8_4:8873915-8873934 | None:intergenic | 50.0% |
| TCCGACCAATTCAGATCCGA+CGG | + | chr8_4:8874149-8874168 | Msa1311960:CDS | 50.0% | |
| TCCGTCGGATCTGAATTGGT+CGG | - | chr8_4:8874153-8874172 | None:intergenic | 50.0% | |
| GATCCGACGGAATTTCTTCC+CGG | + | chr8_4:8874162-8874181 | Msa1311960:CDS | 50.0% | |
| GCAGGTTAGCATGTCGTTGA+TGG | + | chr8_4:8874209-8874228 | Msa1311960:CDS | 50.0% | |
| ! | TGGTGATGAAGGTGATGACG+TGG | + | chr8_4:8874278-8874297 | Msa1311960:CDS | 50.0% |
| GGTGCAGCGTTTATACCATG+TGG | + | chr8_4:8874417-8874436 | Msa1311960:CDS | 50.0% | |
| CTGCAAAACGTGTGTCCACA+TGG | - | chr8_4:8874435-8874454 | None:intergenic | 50.0% | |
| ! | CGGCGAGTTTTCCGATGAGA+CGG | + | chr8_4:8874185-8874204 | Msa1311960:CDS | 55.0% |
| CCGCCGGGAAGAAATTCCGT+CGG | - | chr8_4:8874168-8874187 | None:intergenic | 60.0% | |
| CCGACGGAATTTCTTCCCGG+CGG | + | chr8_4:8874165-8874184 | Msa1311960:CDS | 60.0% | |
| TCATCGGAAAACTCGCCGCC+GGG | - | chr8_4:8874183-8874202 | None:intergenic | 60.0% | |
| CTCATCGGAAAACTCGCCGC+CGG | - | chr8_4:8874184-8874203 | None:intergenic | 60.0% | |
| ! | GTTTTCCGATGAGACGGCGC+AGG | + | chr8_4:8874191-8874210 | Msa1311960:CDS | 60.0% |
| GCTAACCTGCGCCGTCTCAT+CGG | - | chr8_4:8874199-8874218 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 8873832 | 8874539 | 8873832 | ID=Msa1311960;Name=Msa1311960 |
| chr8_4 | mRNA | 8873832 | 8874539 | 8873832 | ID=Msa1311960-mRNA-1;Parent=Msa1311960;Name=Msa1311960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|235 |
| chr8_4 | exon | 8873832 | 8874539 | 8873832 | ID=Msa1311960-mRNA-1:exon:3257;Parent=Msa1311960-mRNA-1 |
| chr8_4 | CDS | 8873832 | 8874539 | 8873832 | ID=Msa1311960-mRNA-1:cds;Parent=Msa1311960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
