Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791920 | XP_003609889.1 | 94.349 | 584 | 22 | 5 | 1 | 583 | 1 | 574 | 0.0 | 1011 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791920 | sp|Q9LI74|CHUP1_ARATH | 48.473 | 262 | 134 | 1 | 305 | 565 | 720 | 981 | 1.01e-80 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791920 | G7JR19 | 94.349 | 584 | 22 | 5 | 1 | 583 | 1 | 574 | 0.0 | 1011 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016380 | Msa0791920 | 0.819309 | 1.242425e-52 | -8.615850e-47 |
| Msa0021710 | Msa0791920 | 0.805704 | 1.174142e-49 | -8.615850e-47 |
| Msa0028450 | Msa0791920 | 0.810243 | 1.270129e-50 | -8.615850e-47 |
| Msa0030760 | Msa0791920 | 0.800598 | 1.337256e-48 | -8.615850e-47 |
| Msa0038750 | Msa0791920 | 0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0039590 | Msa0791920 | 0.807208 | 5.654256e-50 | -8.615850e-47 |
| Msa0042500 | Msa0791920 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
| Msa0078160 | Msa0791920 | 0.803139 | 4.019187e-49 | -8.615850e-47 |
| Msa0078170 | Msa0791920 | 0.807265 | 5.499543e-50 | -8.615850e-47 |
| Msa0079570 | Msa0791920 | 0.807078 | 6.026182e-50 | -8.615850e-47 |
| Msa0089470 | Msa0791920 | 0.841337 | 5.050538e-58 | -8.615850e-47 |
| Msa0113910 | Msa0791920 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa0116950 | Msa0791920 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0608940 | Msa0791920 | 0.817128 | 3.871880e-52 | -8.615850e-47 |
| Msa0612880 | Msa0791920 | 0.853433 | 2.397306e-61 | -8.615850e-47 |
| Msa0612890 | Msa0791920 | 0.803953 | 2.724899e-49 | -8.615850e-47 |
| Msa0619690 | Msa0791920 | 0.806176 | 9.341436e-50 | -8.615850e-47 |
| Msa0625900 | Msa0791920 | 0.834318 | 3.211643e-56 | -8.615850e-47 |
| Msa0634900 | Msa0791920 | 0.806767 | 7.011781e-50 | -8.615850e-47 |
| Msa0648410 | Msa0791920 | 0.814102 | 1.828071e-51 | -8.615850e-47 |
| Msa0651990 | Msa0791920 | 0.803768 | 2.977492e-49 | -8.615850e-47 |
| Msa0663580 | Msa0791920 | 0.837659 | 4.563342e-57 | -8.615850e-47 |
| Msa0663690 | Msa0791920 | 0.834847 | 2.364726e-56 | -8.615850e-47 |
| Msa0690920 | Msa0791920 | 0.811925 | 5.485517e-51 | -8.615850e-47 |
| Msa0691740 | Msa0791920 | 0.811314 | 7.446928e-51 | -8.615850e-47 |
| Msa0698480 | Msa0791920 | 0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0704690 | Msa0791920 | -0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0705810 | Msa0791920 | 0.809567 | 1.775657e-50 | -8.615850e-47 |
| Msa0720130 | Msa0791920 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
| Msa0756440 | Msa0791920 | 0.818695 | 1.714080e-52 | -8.615850e-47 |
| Msa0791920 | Msa0842370 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
| Msa0791920 | Msa1004720 | 0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa0791920 | Msa1022660 | 0.823614 | 1.260035e-53 | -8.615850e-47 |
| Msa0791920 | Msa1033460 | 0.820405 | 6.978838e-53 | -8.615850e-47 |
| Msa0791920 | Msa1039150 | 0.800876 | 1.173203e-48 | -8.615850e-47 |
| Msa0791920 | Msa1071380 | 0.804249 | 2.364978e-49 | -8.615850e-47 |
| Msa0791920 | Msa1073140 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0791920 | Msa1078210 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
| Msa0791920 | Msa1078600 | 0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0791920 | Msa1078770 | 0.805193 | 1.502259e-49 | -8.615850e-47 |
| Msa0791920 | Msa1083660 | 0.805618 | 1.223768e-49 | -8.615850e-47 |
| Msa0791920 | Msa1113780 | 0.820864 | 5.476138e-53 | -8.615850e-47 |
| Msa0791920 | Msa1129660 | 0.826386 | 2.790692e-54 | -8.615850e-47 |
| Msa0791920 | Msa1140480 | 0.801773 | 7.684840e-49 | -8.615850e-47 |
| Msa0791920 | Msa1160470 | 0.825103 | 5.625672e-54 | -8.615850e-47 |
| Msa0791920 | Msa1196210 | 0.805201 | 1.496525e-49 | -8.615850e-47 |
| Msa0791920 | Msa1203840 | 0.805962 | 1.036255e-49 | -8.615850e-47 |
| Msa0791920 | Msa1207770 | 0.800945 | 1.135596e-48 | -8.615850e-47 |
| Msa0791920 | Msa1219440 | 0.999254 | 8.806617e-299 | -8.615850e-47 |
| Msa0791920 | Msa1228600 | 0.825182 | 5.387944e-54 | -8.615850e-47 |
| Msa0791920 | Msa1229880 | 0.800913 | 1.153202e-48 | -8.615850e-47 |
| Msa0791920 | Msa1257860 | 0.800599 | 1.336331e-48 | -8.615850e-47 |
| Msa0791920 | Msa1270860 | 0.801350 | 9.386872e-49 | -8.615850e-47 |
| Msa0791920 | Msa1279240 | 0.802761 | 4.812228e-49 | -8.615850e-47 |
| Msa0791920 | Msa1288970 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0791920 | Msa1296270 | 0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0791920 | Msa1308010 | 0.801124 | 1.043927e-48 | -8.615850e-47 |
| Msa0791920 | Msa1310620 | 0.806870 | 6.668978e-50 | -8.615850e-47 |
| Msa0791920 | Msa1320660 | 0.824668 | 7.123482e-54 | -8.615850e-47 |
| Msa0791920 | Msa1330910 | 0.813590 | 2.369605e-51 | -8.615850e-47 |
| Msa0791920 | Msa1331530 | 0.805492 | 1.300534e-49 | -8.615850e-47 |
| Msa0791920 | Msa1346220 | 0.803369 | 3.603431e-49 | -8.615850e-47 |
| Msa0791920 | Msa1346340 | 0.801824 | 7.501900e-49 | -8.615850e-47 |
| Msa0791920 | Msa1348860 | 0.805148 | 1.535179e-49 | -8.615850e-47 |
| Msa0791920 | Msa1350350 | 0.808895 | 2.473261e-50 | -8.615850e-47 |
| Msa0791920 | Msa1378840 | 0.801769 | 7.700678e-49 | -8.615850e-47 |
| Msa0791920 | Msa1381300 | 0.802930 | 4.440141e-49 | -8.615850e-47 |
| Msa0791920 | Msa1381830 | 0.805483 | 1.306082e-49 | -8.615850e-47 |
| Msa0791920 | Msa1386190 | 0.800508 | 1.394935e-48 | -8.615850e-47 |
| Msa0791920 | Msa1386440 | 0.970759 | 4.154229e-132 | -8.615850e-47 |
| Msa0791920 | Msa1392570 | 0.818311 | 2.094657e-52 | -8.615850e-47 |
| Msa0791920 | Msa1401000 | 0.818667 | 1.739079e-52 | -8.615850e-47 |
| Msa0791920 | Msa1414000 | 0.801878 | 7.313328e-49 | -8.615850e-47 |
| Msa0791920 | Msa1427600 | 0.823001 | 1.751914e-53 | -8.615850e-47 |
| Msa0791920 | Msa1465410 | 0.806724 | 7.159553e-50 | -8.615850e-47 |
| Msa0132920 | Msa0791920 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0136360 | Msa0791920 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
| Msa0138340 | Msa0791920 | 0.804168 | 2.458436e-49 | -8.615850e-47 |
| Msa0140870 | Msa0791920 | 0.832272 | 1.039243e-55 | -8.615850e-47 |
| Msa0147960 | Msa0791920 | 0.802809 | 4.702967e-49 | -8.615850e-47 |
| Msa0160080 | Msa0791920 | 0.816098 | 6.588395e-52 | -8.615850e-47 |
| Msa0160470 | Msa0791920 | 0.808129 | 3.603778e-50 | -8.615850e-47 |
| Msa0164170 | Msa0791920 | -0.805520 | 1.283117e-49 | -8.615850e-47 |
| Msa0169330 | Msa0791920 | 0.800215 | 1.600122e-48 | -8.615850e-47 |
| Msa0170730 | Msa0791920 | 0.807391 | 5.173083e-50 | -8.615850e-47 |
| Msa0178440 | Msa0791920 | 0.843486 | 1.360412e-58 | -8.615850e-47 |
| Msa0185180 | Msa0791920 | 0.827270 | 1.716261e-54 | -8.615850e-47 |
| Msa0186380 | Msa0791920 | 0.835703 | 1.438310e-56 | -8.615850e-47 |
| Msa0190400 | Msa0791920 | 0.807495 | 4.915695e-50 | -8.615850e-47 |
| Msa0193270 | Msa0791920 | 0.828432 | 9.017803e-55 | -8.615850e-47 |
| Msa0195140 | Msa0791920 | 0.816669 | 4.908256e-52 | -8.615850e-47 |
| Msa0209590 | Msa0791920 | 0.809766 | 1.608700e-50 | -8.615850e-47 |
| Msa0227970 | Msa0791920 | 0.804865 | 1.759813e-49 | -8.615850e-47 |
| Msa0234660 | Msa0791920 | 0.817766 | 2.782030e-52 | -8.615850e-47 |
| Msa0370350 | Msa0791920 | 0.817602 | 3.029125e-52 | -8.615850e-47 |
| Msa0375570 | Msa0791920 | 0.804801 | 1.814398e-49 | -8.615850e-47 |
| Msa0384570 | Msa0791920 | 0.801851 | 7.408669e-49 | -8.615850e-47 |
| Msa0385870 | Msa0791920 | 0.835035 | 2.120818e-56 | -8.615850e-47 |
| Msa0417850 | Msa0791920 | 0.805476 | 1.310857e-49 | -8.615850e-47 |
| Msa0424220 | Msa0791920 | 0.805117 | 1.558497e-49 | -8.615850e-47 |
| Msa0430040 | Msa0791920 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0460220 | Msa0791920 | 0.800193 | 1.616957e-48 | -8.615850e-47 |
| Msa0474220 | Msa0791920 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0475080 | Msa0791920 | 0.800710 | 1.268709e-48 | -8.615850e-47 |
| Msa0240590 | Msa0791920 | 0.817691 | 2.891169e-52 | -8.615850e-47 |
| Msa0249670 | Msa0791920 | 0.801508 | 8.709642e-49 | -8.615850e-47 |
| Msa0269430 | Msa0791920 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0272990 | Msa0791920 | 0.855658 | 5.440531e-62 | -8.615850e-47 |
| Msa0276800 | Msa0791920 | 0.816029 | 6.827313e-52 | -8.615850e-47 |
| Msa0279090 | Msa0791920 | 0.813830 | 2.097936e-51 | -8.615850e-47 |
| Msa0297320 | Msa0791920 | 0.801085 | 1.063289e-48 | -8.615850e-47 |
| Msa0307430 | Msa0791920 | -0.804971 | 1.672268e-49 | -8.615850e-47 |
| Msa0316720 | Msa0791920 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
| Msa0483090 | Msa0791920 | 0.819739 | 9.915022e-53 | -8.615850e-47 |
| Msa0515760 | Msa0791920 | -0.824912 | 6.242153e-54 | -8.615850e-47 |
| Msa0522810 | Msa0791920 | 0.800971 | 1.122076e-48 | -8.615850e-47 |
| Msa0523400 | Msa0791920 | 0.831522 | 1.591224e-55 | -8.615850e-47 |
| Msa0527210 | Msa0791920 | 0.806086 | 9.755213e-50 | -8.615850e-47 |
| Msa0538050 | Msa0791920 | 0.812144 | 4.913602e-51 | -8.615850e-47 |
| Msa0550800 | Msa0791920 | 0.800269 | 1.560030e-48 | -8.615850e-47 |
| Msa0565930 | Msa0791920 | 0.804567 | 2.030477e-49 | -8.615850e-47 |
| Msa0585720 | Msa0791920 | 0.839546 | 1.484998e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791920 | MtrunA17_Chr4g0069431 | 94.349 | 584 | 22 | 5 | 1 | 583 | 1 | 574 | 0.0 | 1011 |
| Msa0791920 | MtrunA17_Chr1g0151531 | 42.857 | 406 | 210 | 6 | 168 | 563 | 352 | 745 | 1.52e-91 | 298 |
| Msa0791920 | MtrunA17_Chr5g0422391 | 46.947 | 262 | 139 | 0 | 305 | 566 | 718 | 979 | 4.24e-81 | 274 |
| Msa0791920 | MtrunA17_Chr4g0045981 | 46.816 | 267 | 136 | 3 | 301 | 565 | 345 | 607 | 3.79e-79 | 261 |
| Msa0791920 | MtrunA17_Chr1g0198861 | 44.867 | 263 | 144 | 1 | 304 | 566 | 706 | 967 | 1.27e-76 | 262 |
| Msa0791920 | MtrunA17_Chr5g0430701 | 44.361 | 266 | 143 | 3 | 300 | 564 | 157 | 418 | 1.58e-71 | 236 |
| Msa0791920 | MtrunA17_Chr4g0047791 | 27.727 | 220 | 133 | 7 | 344 | 552 | 543 | 747 | 2.33e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791920 | AT1G48280.1 | 53.372 | 519 | 220 | 7 | 77 | 578 | 41 | 554 | 1.53e-154 | 455 |
| Msa0791920 | AT3G25690.3 | 48.473 | 262 | 134 | 1 | 305 | 565 | 579 | 840 | 1.02e-82 | 276 |
| Msa0791920 | AT3G25690.1 | 48.473 | 262 | 134 | 1 | 305 | 565 | 720 | 981 | 1.02e-81 | 276 |
| Msa0791920 | AT3G25690.2 | 48.473 | 262 | 134 | 1 | 305 | 565 | 720 | 981 | 1.02e-81 | 276 |
| Msa0791920 | AT3G25690.6 | 48.473 | 262 | 134 | 1 | 305 | 565 | 720 | 981 | 1.02e-81 | 276 |
| Msa0791920 | AT3G25690.4 | 48.473 | 262 | 134 | 1 | 305 | 565 | 720 | 981 | 1.02e-81 | 276 |
| Msa0791920 | AT3G25690.5 | 48.473 | 262 | 134 | 1 | 305 | 565 | 722 | 983 | 1.05e-81 | 276 |
| Msa0791920 | AT4G18570.1 | 46.296 | 270 | 138 | 3 | 301 | 565 | 351 | 618 | 6.72e-77 | 256 |
| Msa0791920 | AT1G07120.1 | 39.630 | 270 | 156 | 3 | 304 | 572 | 129 | 392 | 6.96e-63 | 212 |
| Msa0791920 | AT4G18570.2 | 43.256 | 215 | 115 | 3 | 301 | 510 | 351 | 563 | 9.49e-54 | 193 |
| Msa0791920 | AT1G07120.2 | 38.071 | 197 | 119 | 2 | 304 | 499 | 129 | 323 | 9.30e-41 | 150 |
| Msa0791920 | AT4G04980.1 | 24.549 | 277 | 177 | 8 | 304 | 557 | 591 | 858 | 1.14e-12 | 71.6 |
| Msa0791920 | AT4G04980.3 | 24.549 | 277 | 177 | 8 | 304 | 557 | 435 | 702 | 3.26e-12 | 70.1 |
Find 154 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTGTCCTGATTCTTTA+AGG | 0.088834 | 5_3:+3003838 | None:intergenic |
| GAGACTCTATTAACAATTTC+TGG | 0.171556 | 5_3:+3004886 | None:intergenic |
| CTCTCGGCCTATGGCAAAAT+TGG | 0.210477 | 5_3:-3003903 | Msa0791920:CDS |
| CATTAATGGCCTTATAAATA+AGG | 0.231153 | 5_3:-3003590 | Msa0791920:CDS |
| AATTGGTACCTTGGCTTTCA+TGG | 0.247273 | 5_3:+3011350 | None:intergenic |
| CACCATTCACAAATGAATTT+AGG | 0.252788 | 5_3:+3011381 | None:intergenic |
| CATGGTTATGATTCTGAAAA+TGG | 0.253385 | 5_3:+3005083 | None:intergenic |
| CGTCAACAACCTTATTTATA+AGG | 0.256299 | 5_3:+3003581 | None:intergenic |
| ATTGGTGGTGGCGGAGGTGG+TGG | 0.265734 | 5_3:+3003929 | None:intergenic |
| AGGTGGCATGAGGCAGTGGC+TGG | 0.266132 | 5_3:+3003952 | None:intergenic |
| AGGAATACTTAAAATATATT+AGG | 0.267972 | 5_3:+3011552 | None:intergenic |
| AATAATCTTACTTGTCTAAT+AGG | 0.277303 | 5_3:+3003029 | None:intergenic |
| GGAATTGGTGGTGGCGGAGG+TGG | 0.301235 | 5_3:+3003926 | None:intergenic |
| TTTGAATTGTTCTTCATGTC+TGG | 0.303138 | 5_3:+3004823 | None:intergenic |
| ATTCGTGAAATTACAAGTTT+AGG | 0.304601 | 5_3:-3003989 | Msa0791920:CDS |
| TATATTGATAATTGATAATT+CGG | 0.309935 | 5_3:-3001503 | Msa0791920:three_prime_UTR |
| CCTGCACAAACAAAGAAAAT+TGG | 0.312860 | 5_3:+3011333 | None:intergenic |
| AAGAGTAAAAGCTTCTTCTA+AGG | 0.327104 | 5_3:-3004932 | Msa0791920:CDS |
| GGTGGTGGCGGAGGTGGTGG+AGG | 0.332939 | 5_3:+3003932 | None:intergenic |
| GTTTCATTCCTTAAAGAATC+AGG | 0.333152 | 5_3:-3003846 | Msa0791920:CDS |
| AAGTTTGTTGATTGGCTTGA+TGG | 0.337776 | 5_3:-3003529 | Msa0791920:CDS |
| TAAGCTACTAACTTCCCTTT+TGG | 0.338096 | 5_3:+3001471 | None:intergenic |
| ACAAAAGGGGAGTTCATTAA+TGG | 0.342658 | 5_3:-3003604 | Msa0791920:CDS |
| TGATGTTTCAACACACTTCT+TGG | 0.345150 | 5_3:+3005024 | None:intergenic |
| TTGATTCAATTCATCCTTCA+AGG | 0.346025 | 5_3:+3004570 | None:intergenic |
| GTTGGAGTTGGAGCTGGAGC+TGG | 0.350119 | 5_3:+3004028 | None:intergenic |
| ACTGCGTGGATGCTTGATTC+AGG | 0.355659 | 5_3:-3002849 | Msa0791920:CDS |
| GAAGGAGAAGAAAGAGTTGC+TGG | 0.360740 | 5_3:-3004647 | Msa0791920:CDS |
| AAACGTGTTGTTGCTGTTTG+TGG | 0.362608 | 5_3:+3004955 | None:intergenic |
| GTGGAGGTGGCATGAGGCAG+TGG | 0.364724 | 5_3:+3003948 | None:intergenic |
| GGTGGCGGAGGTGGTGGAGG+TGG | 0.364902 | 5_3:+3003935 | None:intergenic |
| AGAGTATACATCAAGTTCTT+AGG | 0.367159 | 5_3:-3011160 | Msa0791920:five_prime_UTR |
| TGACAAATTGGAAATGTCTA+AGG | 0.368724 | 5_3:-3004098 | Msa0791920:CDS |
| ATGGCTTGGAAAGGATTTCT+TGG | 0.371200 | 5_3:-3011196 | Msa0791920:five_prime_UTR |
| GAAGCTAAGATATCAGCTTT+TGG | 0.374043 | 5_3:-3004481 | Msa0791920:CDS |
| ACTTTCAACCTCTTCTTCAA+TGG | 0.375273 | 5_3:+3004762 | None:intergenic |
| ATTCGGTACTTTAATCCAAA+AGG | 0.375913 | 5_3:-3001486 | Msa0791920:three_prime_UTR |
| GGACTTTGGCGTTCTCCAAT+TGG | 0.376486 | 5_3:+3004151 | None:intergenic |
| CTGTCTCACAATCTAGGAAT+AGG | 0.388636 | 5_3:-3001706 | Msa0791920:three_prime_UTR |
| TCTTTCTTCTCCTTCACATC+AGG | 0.396842 | 5_3:+3004655 | None:intergenic |
| TGTCTTTAAATTTAGGACTT+TGG | 0.399296 | 5_3:+3004137 | None:intergenic |
| TGAGAGTTGGAAATGTATAA+TGG | 0.399847 | 5_3:+3011458 | None:intergenic |
| TTTGTAGTTTGCTGGAGGTT+TGG | 0.400853 | 5_3:-3002013 | Msa0791920:intron |
| TAGAGAAGGTGAAGTGGCTA+AGG | 0.401408 | 5_3:-3004725 | Msa0791920:CDS |
| AGTGCACACAATAGCATTGT+AGG | 0.404091 | 5_3:-3003770 | Msa0791920:CDS |
| AAGTTTGCAGTCTGAGGTTA+AGG | 0.405435 | 5_3:-3004593 | Msa0791920:CDS |
| CTAGCTACACATGGAATGTC+AGG | 0.416729 | 5_3:+3003070 | None:intergenic |
| TTGTTGCTCCTCCGCGGCGA+AGG | 0.418429 | 5_3:-3004696 | Msa0791920:CDS |
| TGAAACAGTTGGACAATTGC+AGG | 0.418639 | 5_3:+3003863 | None:intergenic |
| GCCATAGGCCGAGAGGGAAT+TGG | 0.418891 | 5_3:+3003911 | None:intergenic |
| ATCGCATCAGCTTTCTTCTC+AGG | 0.420283 | 5_3:+3003163 | None:intergenic |
| GTCTGAGGTTAAGGCCTTGA+AGG | 0.428726 | 5_3:-3004584 | Msa0791920:CDS |
| ACCAATTCCCTCTCGGCCTA+TGG | 0.432303 | 5_3:-3003912 | Msa0791920:CDS |
| GGGAGGACATTCAAACAAAA+GGG | 0.432637 | 5_3:-3003618 | Msa0791920:CDS |
| GTGGTTGTAGTTGTTGATGT+TGG | 0.441751 | 5_3:+3005048 | None:intergenic |
| AGGGAGGACATTCAAACAAA+AGG | 0.445457 | 5_3:-3003619 | Msa0791920:CDS |
| GAGGGAATTGGTGGTGGCGG+AGG | 0.446478 | 5_3:+3003923 | None:intergenic |
| CGAGACCCTGCTAGGTGTCC+TGG | 0.447818 | 5_3:+3001946 | None:intergenic |
| TCAAGATTCTCTTCTACTAC+AGG | 0.451119 | 5_3:-3002606 | Msa0791920:CDS |
| CACCTAAATTCATTTGTGAA+TGG | 0.451445 | 5_3:-3011383 | Msa0791920:five_prime_UTR |
| TTGGAGTTGGAGCTGGAGCT+GGG | 0.452806 | 5_3:+3004029 | None:intergenic |
| TAGCAGACTTATCCATGGAT+TGG | 0.458930 | 5_3:+3001744 | None:intergenic |
| CAATCTAGGAATAGGATCTT+CGG | 0.459623 | 5_3:-3001698 | Msa0791920:three_prime_UTR |
| GGTGGCATGAGGCAGTGGCT+GGG | 0.460676 | 5_3:+3003953 | None:intergenic |
| AACAAAGAAAATTGGTACCT+TGG | 0.461509 | 5_3:+3011341 | None:intergenic |
| TATAATGGAGGAGAAGGCTA+TGG | 0.463155 | 5_3:+3011473 | None:intergenic |
| CTATTCCTAGATTGTGAGAC+AGG | 0.465500 | 5_3:+3001707 | None:intergenic |
| ACGTCCTCAAGTTTGTTGAT+TGG | 0.467193 | 5_3:-3003537 | Msa0791920:CDS |
| GAGAATCTTGACTAGATTCT+CGG | 0.472953 | 5_3:+3002618 | None:intergenic |
| GCATGACTCGGTGTTGGAGT+TGG | 0.476882 | 5_3:+3004016 | None:intergenic |
| TACAGCCTGTCTCACAATCT+AGG | 0.480676 | 5_3:-3001712 | Msa0791920:three_prime_UTR |
| TTCGGTACTTTAATCCAAAA+GGG | 0.488365 | 5_3:-3001485 | Msa0791920:three_prime_UTR |
| CTCGGTGTTGGAGTTGGAGC+TGG | 0.490223 | 5_3:+3004022 | None:intergenic |
| ACAACAAACAAGTGAAAACT+TGG | 0.494418 | 5_3:-3011582 | Msa0791920:five_prime_UTR |
| TTGTGTGCACTGTTAGCTAT+CGG | 0.496979 | 5_3:+3003782 | None:intergenic |
| TGGCACTAGTAGTACTAGAA+AGG | 0.500083 | 5_3:-3004461 | Msa0791920:intron |
| AAAATTGGCCAACACTCAAA+AGG | 0.501078 | 5_3:-3003888 | Msa0791920:CDS |
| CGAGAGGGAATTGGTGGTGG+CGG | 0.501878 | 5_3:+3003920 | None:intergenic |
| TTCTCGGTCTGAATTTCGAA+TGG | 0.502669 | 5_3:+3002634 | None:intergenic |
| AAATAAGTGATTCCCTTTGA+AGG | 0.502778 | 5_3:+3011532 | None:intergenic |
| TAAACTTGTAATTTCACGAA+TGG | 0.508116 | 5_3:+3003991 | None:intergenic |
| GGCCGAGAGGGAATTGGTGG+TGG | 0.508843 | 5_3:+3003917 | None:intergenic |
| TACTAATGGTTACAAAATGT+TGG | 0.514691 | 5_3:-3001868 | Msa0791920:three_prime_UTR |
| CGTGTACCAGGACACCTAGC+AGG | 0.519130 | 5_3:-3001952 | Msa0791920:CDS |
| TCTTGTTGATGATGATGAAA+TGG | 0.519904 | 5_3:+3004861 | None:intergenic |
| ACCATTTATGCAGATAAAGC+AGG | 0.520291 | 5_3:-3002711 | Msa0791920:intron |
| CATTCACAAATGAATTTAGG+TGG | 0.520837 | 5_3:+3011384 | None:intergenic |
| AAATATTTGATCATGAGAGT+TGG | 0.521188 | 5_3:+3011445 | None:intergenic |
| TGAATGAAGAAGGAGCCAAT+TGG | 0.521786 | 5_3:-3004166 | Msa0791920:intron |
| ACAAGAGATTTCATCTTACA+AGG | 0.523079 | 5_3:-3003098 | Msa0791920:CDS |
| TCTTTAAGGAATGAAACAGT+TGG | 0.523899 | 5_3:+3003852 | None:intergenic |
| GAATTGTTCTTCATGTCTGG+AGG | 0.525161 | 5_3:+3004826 | None:intergenic |
| TAAATTCATTTGTGAATGGT+GGG | 0.525379 | 5_3:-3011379 | Msa0791920:five_prime_UTR |
| GAAATGTATAATGGAGGAGA+AGG | 0.526603 | 5_3:+3011467 | None:intergenic |
| TGTTAAATCCATTGAAGAAG+AGG | 0.527490 | 5_3:-3004770 | Msa0791920:CDS |
| CGCCACCACCAATTCCCTCT+CGG | 0.529784 | 5_3:-3003919 | Msa0791920:CDS |
| TCTCACAAGGGTAGTAGAGA+AGG | 0.531436 | 5_3:-3004739 | Msa0791920:CDS |
| TCCGCGGCGAAGGAGGATTG+AGG | 0.532951 | 5_3:-3004686 | Msa0791920:CDS |
| CTAAATTCATTTGTGAATGG+TGG | 0.536021 | 5_3:-3011380 | Msa0791920:five_prime_UTR |
| GTTTGCTGGAGGTTTGGACT+CGG | 0.537152 | 5_3:-3002007 | Msa0791920:CDS |
| TCACAAAATCCTCTGAGTGA+GGG | 0.540222 | 5_3:+3001779 | None:intergenic |
| TCACGAATGGCCGCATGACT+CGG | 0.541366 | 5_3:+3004004 | None:intergenic |
| TGATGGTGAACTATCCACTT+TGG | 0.546580 | 5_3:-3003512 | Msa0791920:intron |
| TTCACAAAATCCTCTGAGTG+AGG | 0.546846 | 5_3:+3001778 | None:intergenic |
| TATACATCAAGTTCTTAGGC+AGG | 0.550183 | 5_3:-3011156 | Msa0791920:intron |
| AGAAAGTAAACTCCAATCCA+TGG | 0.551083 | 5_3:-3001756 | Msa0791920:three_prime_UTR |
| GAGATAAGACAACGTGTACC+AGG | 0.551315 | 5_3:-3001964 | Msa0791920:CDS |
| GAATCAAGCATCCACGCAGT+TGG | 0.551515 | 5_3:+3002852 | None:intergenic |
| TTTGTTGGCATGGCTTGGAA+AGG | 0.552024 | 5_3:-3011205 | Msa0791920:five_prime_UTR |
| ATAATGGAGGAGAAGGCTAT+GGG | 0.552920 | 5_3:+3011474 | None:intergenic |
| GGTTGTTGACGCGTCCTATG+TGG | 0.553927 | 5_3:-3003569 | Msa0791920:CDS |
| TTTCATAGCAGACTTATCCA+TGG | 0.554882 | 5_3:+3001739 | None:intergenic |
| GAGGTGGTGGAGGTGGCATG+AGG | 0.568430 | 5_3:+3003942 | None:intergenic |
| CAAGATTCTCTTCTACTACA+GGG | 0.570485 | 5_3:-3002605 | Msa0791920:CDS |
| TTTCAACACACTTCTTGGTG+TGG | 0.571663 | 5_3:+3005029 | None:intergenic |
| TCAATCCTCCTTCGCCGCGG+AGG | 0.576166 | 5_3:+3004688 | None:intergenic |
| CTGCTAAAAGATGAGCCGAT+CGG | 0.580631 | 5_3:+3003735 | None:intergenic |
| GATCAAAAGTTTGCAGTCTG+AGG | 0.581358 | 5_3:-3004599 | Msa0791920:CDS |
| AAAGTTCTCGAGACCCTGCT+AGG | 0.581934 | 5_3:+3001938 | None:intergenic |
| GGCATGAGGCAGTGGCTGGG+TGG | 0.585654 | 5_3:+3003956 | None:intergenic |
| TTGGCAGAAACTTACCAAAG+TGG | 0.589687 | 5_3:+3003498 | None:intergenic |
| GACACAAAGAAAGACTTGAA+AGG | 0.597706 | 5_3:-3003824 | Msa0791920:CDS |
| GGGTAGTAGAGAAGGTGAAG+TGG | 0.599882 | 5_3:-3004731 | Msa0791920:CDS |
| ATGGCCGCATGACTCGGTGT+TGG | 0.600205 | 5_3:+3004010 | None:intergenic |
| ATAGGCCGAGAGGGAATTGG+TGG | 0.604197 | 5_3:+3003914 | None:intergenic |
| AGACATGAAGAACAATTCAA+AGG | 0.607109 | 5_3:-3004821 | Msa0791920:CDS |
| GTACATGAAAAGATTGACAA+TGG | 0.611795 | 5_3:-3002666 | Msa0791920:CDS |
| CCATTATTTCCAGATTAGGG+AGG | 0.612869 | 5_3:-3003635 | Msa0791920:intron |
| AACTCCAACACCGAGTCATG+CGG | 0.613679 | 5_3:-3004014 | Msa0791920:CDS |
| AGAGGTTGAAAGTTCTCACA+AGG | 0.614576 | 5_3:-3004752 | Msa0791920:CDS |
| TCTTAGCTTCAGCAGAGGCA+AGG | 0.616432 | 5_3:+3004494 | None:intergenic |
| ATTCACAAATGAATTTAGGT+GGG | 0.617133 | 5_3:+3011385 | None:intergenic |
| GAGTTGGAAATGTATAATGG+AGG | 0.635185 | 5_3:+3011461 | None:intergenic |
| GCGGCGAAGGAGGATTGAGG+AGG | 0.642553 | 5_3:-3004683 | Msa0791920:CDS |
| AGGAGAAATTCAAAACCGAT+CGG | 0.644632 | 5_3:-3003750 | Msa0791920:CDS |
| TCCTCAATCCTCCTTCGCCG+CGG | 0.645515 | 5_3:+3004685 | None:intergenic |
| TGATTCAGGAATATCAAGCA+AGG | 0.648011 | 5_3:-3002835 | Msa0791920:intron |
| GTGTACCAGGACACCTAGCA+GGG | 0.652467 | 5_3:-3001951 | Msa0791920:CDS |
| GGACTAATCCATGAAAGCCA+AGG | 0.655987 | 5_3:-3011358 | Msa0791920:five_prime_UTR |
| ACTCTATTAACAATTTCTGG+TGG | 0.657904 | 5_3:+3004889 | None:intergenic |
| GGAGGATGATCCTGATGTGA+AGG | 0.659226 | 5_3:-3004665 | Msa0791920:CDS |
| TTGTTGTTGTTGCTCCTCCG+CGG | 0.661878 | 5_3:-3004702 | Msa0791920:CDS |
| GAGGTTGAAAGTTCTCACAA+GGG | 0.663825 | 5_3:-3004751 | Msa0791920:CDS |
| GGAGGACATTCAAACAAAAG+GGG | 0.668018 | 5_3:-3003617 | Msa0791920:CDS |
| AGAGTTGCTGGAGAAGCTTG+AGG | 0.669222 | 5_3:-3004635 | Msa0791920:CDS |
| CAAGCCAATCAACAAACTTG+AGG | 0.672914 | 5_3:+3003533 | None:intergenic |
| TAGCTACACATGGAATGTCA+GGG | 0.673873 | 5_3:+3003071 | None:intergenic |
| TGATATCTTAGCTTCAGCAG+AGG | 0.675148 | 5_3:+3004489 | None:intergenic |
| TGTACAACATTCCAACTGCG+TGG | 0.679840 | 5_3:-3002863 | Msa0791920:CDS |
| GACGTCTTCAATGTCCACAT+AGG | 0.698223 | 5_3:+3003555 | None:intergenic |
| GAAAGCTGATGCGATGCGTG+AGG | 0.701618 | 5_3:-3003155 | Msa0791920:CDS |
| TAATGGAGGAGAAGGCTATG+GGG | 0.702499 | 5_3:+3011475 | None:intergenic |
| ATCGTTGTGATAGGTCTGAG+CGG | 0.705998 | 5_3:-3002938 | Msa0791920:intron |
| AGTATGAAACCCTCACTCAG+AGG | 0.713316 | 5_3:-3001788 | Msa0791920:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATCAAATTATTAAAAT+TGG | - | chr5_3:3002766-3002785 | Msa0791920:intron | 10.0% |
| !!! | AAATATTTAAAATAAAGAAG+AGG | - | chr5_3:3003172-3003191 | Msa0791920:CDS | 10.0% |
| !!! | AAATATTTAAAATAAAGAAG+AGG | - | chr5_3:3003172-3003191 | Msa0791920:CDS | 10.0% |
| !!! | AGTTTTATAGTTTTTTTTAA+TGG | + | chr5_3:3003383-3003402 | None:intergenic | 10.0% |
| !! | TTAAAAAAATCATTTGAAAA+TGG | + | chr5_3:3003497-3003516 | None:intergenic | 10.0% |
| !! | GATATTAAAAAAATTGATAA+AGG | - | chr5_3:3003671-3003690 | Msa0791920:intron | 10.0% |
| !!! | ATTGATCATTTAAATTATTT+TGG | + | chr5_3:3003709-3003728 | None:intergenic | 10.0% |
| !!! | TAAATCATTTTGATAAATAT+TGG | - | chr5_3:3003803-3003822 | Msa0791920:CDS | 10.0% |
| !! | TGATATATTAATATGATATT+AGG | - | chr5_3:3004168-3004187 | Msa0791920:intron | 10.0% |
| !!! | ATATAATTATTTTTTTGACA+AGG | - | chr5_3:3005046-3005065 | Msa0791920:CDS | 10.0% |
| !! | AAAATCAAATTTATAAAAGT+CGG | + | chr5_3:3005326-3005345 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_3:3006122-3006141 | Msa0791920:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_3:3006123-3006142 | Msa0791920:intron | 10.0% |
| !!! | TTAGTAAAACATAAATTTTA+TGG | + | chr5_3:3006535-3006554 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAGTAACTTTTA+AGG | - | chr5_3:3010510-3010529 | Msa0791920:intron | 10.0% |
| !!! | TATTAGACTTAAATTTTTAA+TGG | + | chr5_3:3010684-3010703 | None:intergenic | 10.0% |
| !! | ATAACAATAATTTAAGAAAA+TGG | + | chr5_3:3010800-3010819 | None:intergenic | 10.0% |
| !!! | TATATTGATAATTGATAATT+CGG | - | chr5_3:3011559-3011578 | Msa0791920:five_prime_UTR | 10.0% |
| !! | AGGAATACTTAAAATATATT+AGG | + | chr5_3:3001513-3001532 | None:intergenic | 15.0% |
| !! | TATAGATGAATTATTATGAA+TGG | + | chr5_3:3001763-3001782 | None:intergenic | 15.0% |
| !!! | TCAAATGATTTTTTTAATCA+CGG | - | chr5_3:3003500-3003519 | Msa0791920:intron | 15.0% |
| !! | CGATTGAAAAATAATAATTA+AGG | + | chr5_3:3003575-3003594 | None:intergenic | 15.0% |
| !! | AACTTATAAAAATTGTAAGT+GGG | - | chr5_3:3004329-3004348 | Msa0791920:intron | 15.0% |
| !! | AAATAACATCATAGTAATTA+AGG | + | chr5_3:3005174-3005193 | None:intergenic | 15.0% |
| !!! | CAATTTTATACAAAAGTAAT+CGG | + | chr5_3:3005861-3005880 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_3:3006124-3006143 | Msa0791920:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_3:3006186-3006205 | Msa0791920:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5_3:3006187-3006206 | Msa0791920:intron | 15.0% |
| !!! | TATAATATATTTCCTTTTCT+CGG | + | chr5_3:3006510-3006529 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGAACTTTT+TGG | - | chr5_3:3006554-3006573 | Msa0791920:intron | 15.0% |
| !! | AATAAGACACAAAAATAAAA+TGG | - | chr5_3:3006797-3006816 | Msa0791920:intron | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | + | chr5_3:3007084-3007103 | None:intergenic | 15.0% |
| !!! | ATACATATATTGATCTTTTA+CGG | - | chr5_3:3007321-3007340 | Msa0791920:intron | 15.0% |
| !! | TAAGAATAAAGATTTCAAAA+TGG | - | chr5_3:3007591-3007610 | Msa0791920:intron | 15.0% |
| !!! | TTTTGTATGTCTTTAAATTT+AGG | + | chr5_3:3008935-3008954 | None:intergenic | 15.0% |
| !!! | GATCTTTTTAAAATATTGTT+TGG | - | chr5_3:3009717-3009736 | Msa0791920:intron | 15.0% |
| !!! | TATTTTAAGTATTCCTTCAA+AGG | - | chr5_3:3001517-3001536 | Msa0791920:three_prime_UTR | 20.0% |
| !!! | ATTTTAAGTATTCCTTCAAA+GGG | - | chr5_3:3001518-3001537 | Msa0791920:three_prime_UTR | 20.0% |
| !!! | TGTATGGTTTTTAGTTATAA+TGG | + | chr5_3:3002156-3002175 | None:intergenic | 20.0% |
| !! | TCAAAACATAAATGTATGTA+TGG | + | chr5_3:3002172-3002191 | None:intergenic | 20.0% |
| !! | TTCTTCATATCTTTCAAAAA+TGG | + | chr5_3:3002261-3002280 | None:intergenic | 20.0% |
| !! | AATACAATAATACCTACAAT+TGG | - | chr5_3:3002384-3002403 | Msa0791920:intron | 20.0% |
| !!! | AAATTATGCATGTTAATTTG+TGG | + | chr5_3:3002793-3002812 | None:intergenic | 20.0% |
| !! | AAATAGTTATGTTTCTCTAT+CGG | + | chr5_3:3003038-3003057 | None:intergenic | 20.0% |
| !! | ATAATAGAAAAAAATGCACA+AGG | - | chr5_3:3003415-3003434 | Msa0791920:intron | 20.0% |
| !! | TATTGATAAAGTGATTCTTA+TGG | - | chr5_3:3003885-3003904 | Msa0791920:CDS | 20.0% |
| !! | ATTGATAAAGTGATTCTTAT+GGG | - | chr5_3:3003886-3003905 | Msa0791920:CDS | 20.0% |
| !!! | TGATTGATAACTATAGTTAA+AGG | - | chr5_3:3004073-3004092 | Msa0791920:CDS | 20.0% |
| !!! | GATTGATAACTATAGTTAAA+GGG | - | chr5_3:3004074-3004093 | Msa0791920:CDS | 20.0% |
| !! | GATTGTTAAACAAAATTAAG+AGG | - | chr5_3:3004264-3004283 | Msa0791920:intron | 20.0% |
| !! | CAACTTATAAAAATTGTAAG+TGG | - | chr5_3:3004328-3004347 | Msa0791920:intron | 20.0% |
| !! | ACTTATAAAAATTGTAAGTG+GGG | - | chr5_3:3004330-3004349 | Msa0791920:intron | 20.0% |
| !! | TGCAAACTAATATTTAGTTA+TGG | + | chr5_3:3004445-3004464 | None:intergenic | 20.0% |
| !! | CATAGTAATTAAGGAATATT+TGG | + | chr5_3:3005165-3005184 | None:intergenic | 20.0% |
| !! | AAAACAAAATGAAAACATTC+AGG | + | chr5_3:3005198-3005217 | None:intergenic | 20.0% |
| !! | CTTCATTGAAATAACAAAAA+TGG | - | chr5_3:3005700-3005719 | Msa0791920:intron | 20.0% |
| !! | AAGTTTCTATTCTAGTATTT+AGG | + | chr5_3:3005756-3005775 | None:intergenic | 20.0% |
| !! | AGTCATATAGTCATTATATA+TGG | - | chr5_3:3006015-3006034 | Msa0791920:intron | 20.0% |
| !! | TTGTACTTAACTATAACAAA+AGG | - | chr5_3:3006965-3006984 | Msa0791920:intron | 20.0% |
| !! | ATCTAATCTAGATTTAATTG+CGG | - | chr5_3:3006990-3007009 | Msa0791920:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | + | chr5_3:3007085-3007104 | None:intergenic | 20.0% |
| !! | TATATAAATAAAGAGGAAAG+TGG | - | chr5_3:3007128-3007147 | Msa0791920:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5_3:3006147-3006166 | Msa0791920:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5_3:3007254-3007273 | Msa0791920:intron | 20.0% |
| !! | AAAAAAGTTGGATATTGAAA+AGG | - | chr5_3:3007548-3007567 | Msa0791920:intron | 20.0% |
| !!! | GTTCATAAAAATACTTCTTT+TGG | + | chr5_3:3008267-3008286 | None:intergenic | 20.0% |
| !!! | AAGAAGTATTTTTATGAACA+AGG | - | chr5_3:3008268-3008287 | Msa0791920:intron | 20.0% |
| !! | TTAATCAATCATTGTTTGAT+TGG | - | chr5_3:3008742-3008761 | Msa0791920:intron | 20.0% |
| !!! | TTTGAGATAGATACAATTTT+AGG | + | chr5_3:3008839-3008858 | None:intergenic | 20.0% |
| !! | AAAGTGTACATAAAACAAAA+TGG | - | chr5_3:3009804-3009823 | Msa0791920:intron | 20.0% |
| !! | AATAATCTTACTTGTCTAAT+AGG | + | chr5_3:3010036-3010055 | None:intergenic | 20.0% |
| !! | TACTAAAAAAAATACCTGAT+GGG | + | chr5_3:3010503-3010522 | None:intergenic | 20.0% |
| !! | TTACTAAAAAAAATACCTGA+TGG | + | chr5_3:3010504-3010523 | None:intergenic | 20.0% |
| !!! | AGACTTAAATTTTTAATGGA+TGG | + | chr5_3:3010680-3010699 | None:intergenic | 20.0% |
| !! | GATAATAAGTGAAAATGAAA+TGG | - | chr5_3:3010874-3010893 | Msa0791920:intron | 20.0% |
| !! | TACAAAAAATACAAAGAAAG+AGG | + | chr5_3:3010985-3011004 | None:intergenic | 20.0% |
| !!! | ATTTTTAATACTGCTACTAA+TGG | - | chr5_3:3011180-3011199 | Msa0791920:five_prime_UTR | 20.0% |
| ! | AAATATTTGATCATGAGAGT+TGG | + | chr5_3:3001620-3001639 | None:intergenic | 25.0% |
| !!! | ATATGTAGCTTTTTTCTTTG+TGG | + | chr5_3:3001647-3001666 | None:intergenic | 25.0% |
| ! | ATTCACAAATGAATTTAGGT+GGG | + | chr5_3:3001680-3001699 | None:intergenic | 25.0% |
| ! | TAAATTCATTTGTGAATGGT+GGG | - | chr5_3:3001683-3001702 | Msa0791920:three_prime_UTR | 25.0% |
| !!! | GTTTTTAGTTATAATGGACA+TGG | + | chr5_3:3002150-3002169 | None:intergenic | 25.0% |
| ! | TATGAAGAAGATGAACAAAA+AGG | - | chr5_3:3002272-3002291 | Msa0791920:intron | 25.0% |
| ! | ATGAAGAAGATGAACAAAAA+GGG | - | chr5_3:3002273-3002292 | Msa0791920:intron | 25.0% |
| ! | TAATAACTAGACCCAATTTA+AGG | + | chr5_3:3002306-3002325 | None:intergenic | 25.0% |
| ! | GCACATTTCTTTGTTAAAAT+TGG | + | chr5_3:3002411-3002430 | None:intergenic | 25.0% |
| !!! | TATTGTTTTGATCAGAAATG+TGG | + | chr5_3:3002444-3002463 | None:intergenic | 25.0% |
| ! | TCATGTATACCAAATGTATA+GGG | + | chr5_3:3002875-3002894 | None:intergenic | 25.0% |
| !!! | ATGTATTTGCTATATAGACT+TGG | + | chr5_3:3003292-3003311 | None:intergenic | 25.0% |
| !! | ATTTTATTCTTTACATCCAC+CGG | - | chr5_3:3003634-3003653 | Msa0791920:intron | 25.0% |
| !!! | ATATCGGTTAATTTTCATTC+CGG | + | chr5_3:3003656-3003675 | None:intergenic | 25.0% |
| !!! | TCATTTTGATAAATATTGGC+AGG | - | chr5_3:3003807-3003826 | Msa0791920:CDS | 25.0% |
| ! | TTGATAAAGTGATTCTTATG+GGG | - | chr5_3:3003887-3003906 | Msa0791920:CDS | 25.0% |
| !! | TCTAAATTCTTGCTATAAGA+AGG | + | chr5_3:3003918-3003937 | None:intergenic | 25.0% |
| ! | GTTATCAATCATTAACAAGA+GGG | + | chr5_3:3004064-3004083 | None:intergenic | 25.0% |
| ! | AGTTATCAATCATTAACAAG+AGG | + | chr5_3:3004065-3004084 | None:intergenic | 25.0% |
| ! | ATAACTATAGTTAAAGGGTA+AGG | - | chr5_3:3004079-3004098 | Msa0791920:CDS | 25.0% |
| ! | AGGGTAAGGAAAATAATTTA+CGG | - | chr5_3:3004093-3004112 | Msa0791920:CDS | 25.0% |
| !!! | CTACAAAGATTTTTTTTGAG+AGG | - | chr5_3:3004134-3004153 | Msa0791920:CDS | 25.0% |
| !!! | AATTTTGTTTAACAATCGAG+AGG | + | chr5_3:3004261-3004280 | None:intergenic | 25.0% |
| ! | AAAAAGTTGAGAAAGTTATG+CGG | + | chr5_3:3004383-3004402 | None:intergenic | 25.0% |
| ! | AGTTATGGCTAATGATATTT+GGG | + | chr5_3:3004430-3004449 | None:intergenic | 25.0% |
| ! | TAGTTATGGCTAATGATATT+TGG | + | chr5_3:3004431-3004450 | None:intergenic | 25.0% |
| ! | CTTACTTAGTTATATACTTG+AGG | - | chr5_3:3004466-3004485 | Msa0791920:CDS | 25.0% |
| ! | TTTGTAAAAGATTATCTTCC+TGG | - | chr5_3:3004596-3004615 | Msa0791920:CDS | 25.0% |
| ! | TAAGACTATTACATAACATG+CGG | + | chr5_3:3005247-3005266 | None:intergenic | 25.0% |
| !! | TTTTTACCTAACTAATCTCT+TGG | + | chr5_3:3005443-3005462 | None:intergenic | 25.0% |
| !!! | TTTTCAAGACATTCTAATGA+TGG | + | chr5_3:3005563-3005582 | None:intergenic | 25.0% |
| ! | TTCTTAGGTGAAACTATTAA+TGG | + | chr5_3:3005664-3005683 | None:intergenic | 25.0% |
| ! | GAGGAGAAATTTCAATTATT+GGG | + | chr5_3:3005952-3005971 | None:intergenic | 25.0% |
| ! | TGAGGAGAAATTTCAATTAT+TGG | + | chr5_3:3005953-3005972 | None:intergenic | 25.0% |
| !! | TTTGCATTGAGAAACAATTT+TGG | - | chr5_3:3005973-3005992 | Msa0791920:intron | 25.0% |
| ! | ATAATGACTATATGACTAAG+TGG | + | chr5_3:3006012-3006031 | None:intergenic | 25.0% |
| ! | TATATAGTGCATATACATAG+AGG | + | chr5_3:3006051-3006070 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_3:3006146-3006165 | Msa0791920:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_3:3006233-3006252 | Msa0791920:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_3:3006234-3006253 | Msa0791920:intron | 25.0% |
| ! | AAATATATATGTGCCAAAGT+TGG | - | chr5_3:3006423-3006442 | Msa0791920:intron | 25.0% |
| ! | ACCAATAAAATATCCAACTT+TGG | + | chr5_3:3006439-3006458 | None:intergenic | 25.0% |
| !! | TTATTGGTTGTATAGTATGA+AGG | - | chr5_3:3006451-3006470 | Msa0791920:intron | 25.0% |
| !! | TATTGGTTGTATAGTATGAA+GGG | - | chr5_3:3006452-3006471 | Msa0791920:intron | 25.0% |
| !! | CTCTTATTTGTACTTGTTTA+CGG | - | chr5_3:3007021-3007040 | Msa0791920:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_3:3006146-3006165 | Msa0791920:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_3:3006233-3006252 | Msa0791920:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_3:3006234-3006253 | Msa0791920:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5_3:3007253-3007272 | Msa0791920:intron | 25.0% |
| !! | TCTTTATTCTTATTTGCTCA+TGG | + | chr5_3:3007583-3007602 | None:intergenic | 25.0% |
| ! | AAGTCAATGATACACATATT+AGG | + | chr5_3:3007633-3007652 | None:intergenic | 25.0% |
| !!! | TTTTATTTATTCTACGTGTC+AGG | - | chr5_3:3007860-3007879 | Msa0791920:intron | 25.0% |
| ! | AAAAATCAGATTCATTGCTA+AGG | + | chr5_3:3008868-3008887 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTTGAATGAAGA+AGG | - | chr5_3:3008886-3008905 | Msa0791920:intron | 25.0% |
| !! | TGTCTTTAAATTTAGGACTT+TGG | + | chr5_3:3008928-3008947 | None:intergenic | 25.0% |
| ! | AAAAATCATTGCTGACAAAT+TGG | - | chr5_3:3008952-3008971 | Msa0791920:intron | 25.0% |
| ! | TAAACTTGTAATTTCACGAA+TGG | + | chr5_3:3009074-3009093 | None:intergenic | 25.0% |
| ! | ATTCGTGAAATTACAAGTTT+AGG | - | chr5_3:3009073-3009092 | Msa0791920:intron | 25.0% |
| !!! | CATTAATGGCCTTATAAATA+AGG | - | chr5_3:3009472-3009491 | Msa0791920:intron | 25.0% |
| ! | TTTCTGCCAAAGTTATTTAT+TGG | - | chr5_3:3009577-3009596 | Msa0791920:intron | 25.0% |
| ! | CTATTTATGAACTACTGATA+TGG | - | chr5_3:3010068-3010087 | Msa0791920:intron | 25.0% |
| !! | AGTTCTAATAAGCATTTCAA+AGG | + | chr5_3:3010313-3010332 | None:intergenic | 25.0% |
| ! | TTATCTATGAAACATTGACA+TGG | + | chr5_3:3010859-3010878 | None:intergenic | 25.0% |
| ! | TGAAATGGTTGTAAAAGTTT+CGG | - | chr5_3:3010889-3010908 | Msa0791920:intron | 25.0% |
| !!! | ATACAAAGAAAGAGGTATTT+CGG | + | chr5_3:3010977-3010996 | None:intergenic | 25.0% |
| !!! | TTTTTTGTATCTTTTGAACC+AGG | - | chr5_3:3010996-3011015 | Msa0791920:intron | 25.0% |
| !!! | TTTATTGTTTTGTAGTTTGC+TGG | - | chr5_3:3011041-3011060 | Msa0791920:intron | 25.0% |
| ! | TACTAATGGTTACAAAATGT+TGG | - | chr5_3:3011194-3011213 | Msa0791920:five_prime_UTR | 25.0% |
| !! | CATGACTTTTACATTATTAG+AGG | + | chr5_3:3011480-3011499 | None:intergenic | 25.0% |
| ACAACAAACAAGTGAAAACT+TGG | - | chr5_3:3001480-3001499 | Msa0791920:three_prime_UTR | 30.0% | |
| AAATAAGTGATTCCCTTTGA+AGG | + | chr5_3:3001533-3001552 | None:intergenic | 30.0% | |
| TGAGAGTTGGAAATGTATAA+TGG | + | chr5_3:3001607-3001626 | None:intergenic | 30.0% | |
| CATTCACAAATGAATTTAGG+TGG | + | chr5_3:3001681-3001700 | None:intergenic | 30.0% | |
| CACCTAAATTCATTTGTGAA+TGG | - | chr5_3:3001679-3001698 | Msa0791920:three_prime_UTR | 30.0% | |
| CACCATTCACAAATGAATTT+AGG | + | chr5_3:3001684-3001703 | None:intergenic | 30.0% | |
| CTAAATTCATTTGTGAATGG+TGG | - | chr5_3:3001682-3001701 | Msa0791920:three_prime_UTR | 30.0% | |
| AACAAAGAAAATTGGTACCT+TGG | + | chr5_3:3001724-3001743 | None:intergenic | 30.0% | |
| ! | TGACATCAAAGAGATTTTGT+TGG | - | chr5_3:3001842-3001861 | Msa0791920:three_prime_UTR | 30.0% |
| AGAGTATACATCAAGTTCTT+AGG | - | chr5_3:3001902-3001921 | Msa0791920:exon | 30.0% | |
| TGGTGTTCACATATCTTTAT+AGG | - | chr5_3:3002000-3002019 | Msa0791920:CDS | 30.0% | |
| GCAAATATTAGTAAGTTAGC+TGG | - | chr5_3:3002022-3002041 | Msa0791920:intron | 30.0% | |
| !! | CTTCTTAGCAATTTTGCTAT+TGG | + | chr5_3:3002235-3002254 | None:intergenic | 30.0% |
| CAATAGCAAAATTGCTAAGA+AGG | - | chr5_3:3002233-3002252 | Msa0791920:intron | 30.0% | |
| ATTGGGTCTAGTTATTAGTT+AGG | - | chr5_3:3002309-3002328 | Msa0791920:intron | 30.0% | |
| GTTAAAATTGGTCCAATTGT+AGG | + | chr5_3:3002399-3002418 | None:intergenic | 30.0% | |
| ACAAAGAAATGTGCTAAATG+CGG | - | chr5_3:3002417-3002436 | Msa0791920:intron | 30.0% | |
| AAGTTTAACGTATATGCCAA+AGG | + | chr5_3:3002698-3002717 | None:intergenic | 30.0% | |
| GTACGTAGCATTACTTAAAT+GGG | + | chr5_3:3002740-3002759 | None:intergenic | 30.0% | |
| TGTACGTAGCATTACTTAAA+TGG | + | chr5_3:3002741-3002760 | None:intergenic | 30.0% | |
| CATGCATTTCTTATGAGTTA+TGG | - | chr5_3:3002848-3002867 | Msa0791920:CDS | 30.0% | |
| CATGTATACCAAATGTATAG+GGG | + | chr5_3:3002874-3002893 | None:intergenic | 30.0% | |
| GTCATGTATACCAAATGTAT+AGG | + | chr5_3:3002876-3002895 | None:intergenic | 30.0% | |
| TATGCTCAGATAAACGAAAA+AGG | + | chr5_3:3002983-3003002 | None:intergenic | 30.0% | |
| ACAAAAGGGGTCATTATTTA+GGG | + | chr5_3:3003010-3003029 | None:intergenic | 30.0% | |
| AACAAAAGGGGTCATTATTT+AGG | + | chr5_3:3003011-3003030 | None:intergenic | 30.0% | |
| ! | GCTTTTTACAGCATTAAGTA+AGG | - | chr5_3:3003067-3003086 | Msa0791920:CDS | 30.0% |
| !! | TAAGGAATTTGTTGTGACTA+TGG | - | chr5_3:3003085-3003104 | Msa0791920:CDS | 30.0% |
| !! | AAGGAATTTGTTGTGACTAT+GGG | - | chr5_3:3003086-3003105 | Msa0791920:CDS | 30.0% |
| !! | CTTTATCTTGAAGCTTTGTT+TGG | - | chr5_3:3003319-3003338 | Msa0791920:intron | 30.0% |
| ATTGCAAACCTCAAACTTAA+AGG | - | chr5_3:3003731-3003750 | Msa0791920:intron | 30.0% | |
| ATAAATATTGGCAGGAAAAG+TGG | - | chr5_3:3003815-3003834 | Msa0791920:CDS | 30.0% | |
| ACAAAATTCTCAAATCCGAT+AGG | + | chr5_3:3003863-3003882 | None:intergenic | 30.0% | |
| TGATAAAGTGATTCTTATGG+GGG | - | chr5_3:3003888-3003907 | Msa0791920:CDS | 30.0% | |
| ! | TAGATTCATCTTTTTGTGAG+TGG | - | chr5_3:3003934-3003953 | Msa0791920:CDS | 30.0% |
| ! | TGCACTTTTGCTTTATAAAG+TGG | - | chr5_3:3003960-3003979 | Msa0791920:CDS | 30.0% |
| ! | GCACTTTTGCTTTATAAAGT+GGG | - | chr5_3:3003961-3003980 | Msa0791920:CDS | 30.0% |
| ! | TCTTTGTAGAATGCGTATTT+TGG | + | chr5_3:3004123-3004142 | None:intergenic | 30.0% |
| ATCTCACCTTAATAATGCAT+CGG | - | chr5_3:3004299-3004318 | Msa0791920:intron | 30.0% | |
| TATAACCCGATGCATTATTA+AGG | + | chr5_3:3004308-3004327 | None:intergenic | 30.0% | |
| AAGACTATTACATAACATGC+GGG | + | chr5_3:3005246-3005265 | None:intergenic | 30.0% | |
| GAGACATTAAACATTATTCG+TGG | - | chr5_3:3005375-3005394 | Msa0791920:intron | 30.0% | |
| ACTAATCTCTTGGAAGTTTA+AGG | + | chr5_3:3005433-3005452 | None:intergenic | 30.0% | |
| ! | AAACTTCCAAGAGATTAGTT+AGG | - | chr5_3:3005434-3005453 | Msa0791920:intron | 30.0% |
| CAAGAATGCAAGACAAATTA+AGG | - | chr5_3:3005537-3005556 | Msa0791920:intron | 30.0% | |
| !!! | TGTGTCATTTGTGTTTTCTT+AGG | + | chr5_3:3005679-3005698 | None:intergenic | 30.0% |
| AGTCATATGGAATTTAGGAA+TGG | + | chr5_3:3005910-3005929 | None:intergenic | 30.0% | |
| ATATTAACTGCGAAGTCATA+TGG | + | chr5_3:3005923-3005942 | None:intergenic | 30.0% | |
| ! | ATTGTTTCTCAATGCAAATG+AGG | + | chr5_3:3005971-3005990 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_3:3006131-3006150 | Msa0791920:intron | 30.0% | |
| !!! | GGGACACTTTTTTTAGAAAA+TGG | - | chr5_3:3006254-3006273 | Msa0791920:intron | 30.0% |
| AGAAAATGGATCAGTTATTC+CGG | - | chr5_3:3006268-3006287 | Msa0791920:intron | 30.0% | |
| ! | GCCAAAGTTGGATATTTTAT+TGG | - | chr5_3:3006435-3006454 | Msa0791920:intron | 30.0% |
| GGGAATCTGATATAAAACTA+AGG | - | chr5_3:3006472-3006491 | Msa0791920:intron | 30.0% | |
| !!! | TGTTACGCTTTTAGAATGAA+AGG | + | chr5_3:3006582-3006601 | None:intergenic | 30.0% |
| ! | ACTTTAGGTAAAACTCGTTT+TGG | + | chr5_3:3006686-3006705 | None:intergenic | 30.0% |
| CTAAAGTCATGATCTGAATT+CGG | - | chr5_3:3006699-3006718 | Msa0791920:intron | 30.0% | |
| TAAGATGCTACTAGAGAAAA+CGG | + | chr5_3:3006832-3006851 | None:intergenic | 30.0% | |
| CGTAAACAAGTACAAATAAG+AGG | + | chr5_3:3007023-3007042 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | + | chr5_3:3007080-3007099 | None:intergenic | 30.0% | |
| GATGAAATCTATTGATCCAA+CGG | + | chr5_3:3007413-3007432 | None:intergenic | 30.0% | |
| !!! | ATCCAACTTTTTTAGACTTG+CGG | + | chr5_3:3007541-3007560 | None:intergenic | 30.0% |
| TGTATGAGTGTGAATATAGA+AGG | + | chr5_3:3007811-3007830 | None:intergenic | 30.0% | |
| ! | CATGGTTATGATTCTGAAAA+TGG | + | chr5_3:3007982-3008001 | None:intergenic | 30.0% |
| AAGAGTAAAAGCTTCTTCTA+AGG | - | chr5_3:3008130-3008149 | Msa0791920:intron | 30.0% | |
| ! | ACTCTATTAACAATTTCTGG+TGG | + | chr5_3:3008176-3008195 | None:intergenic | 30.0% |
| GAGACTCTATTAACAATTTC+TGG | + | chr5_3:3008179-3008198 | None:intergenic | 30.0% | |
| !! | TCTTGTTGATGATGATGAAA+TGG | + | chr5_3:3008204-3008223 | None:intergenic | 30.0% |
| TTTGAATTGTTCTTCATGTC+TGG | + | chr5_3:3008242-3008261 | None:intergenic | 30.0% | |
| AGACATGAAGAACAATTCAA+AGG | - | chr5_3:3008241-3008260 | Msa0791920:intron | 30.0% | |
| TGTTAAATCCATTGAAGAAG+AGG | - | chr5_3:3008292-3008311 | Msa0791920:intron | 30.0% | |
| TTGATTCAATTCATCCTTCA+AGG | + | chr5_3:3008495-3008514 | None:intergenic | 30.0% | |
| CAAGTTAACACTCTAAACTA+AGG | + | chr5_3:3008773-3008792 | None:intergenic | 30.0% | |
| !! | GTTTAGAGTGTTAACTTGTA+TGG | - | chr5_3:3008775-3008794 | Msa0791920:intron | 30.0% |
| TGACAAATTGGAAATGTCTA+AGG | - | chr5_3:3008964-3008983 | Msa0791920:intron | 30.0% | |
| AAAAAAAGAAGCTAATCCTG+AGG | - | chr5_3:3008988-3009007 | Msa0791920:intron | 30.0% | |
| GATTTAACAAAAATCACCTC+AGG | + | chr5_3:3009007-3009026 | None:intergenic | 30.0% | |
| ! | TCTTTAAGGAATGAAACAGT+TGG | + | chr5_3:3009213-3009232 | None:intergenic | 30.0% |
| GTTTCATTCCTTAAAGAATC+AGG | - | chr5_3:3009216-3009235 | Msa0791920:intron | 30.0% | |
| ! | CGTCAACAACCTTATTTATA+AGG | + | chr5_3:3009484-3009503 | None:intergenic | 30.0% |
| TGCCAAAGTTATTTATTGGT+GGG | - | chr5_3:3009581-3009600 | Msa0791920:intron | 30.0% | |
| CATATATATTAGCTGCATCA+AGG | + | chr5_3:3009607-3009626 | None:intergenic | 30.0% | |
| ! | TTTTCTCCTCAAAAGAAGTT+AGG | + | chr5_3:3009743-3009762 | None:intergenic | 30.0% |
| AGAAAATAAGTCAGACTAAG+CGG | - | chr5_3:3009757-3009776 | Msa0791920:intron | 30.0% | |
| ACAAGAGATTTCATCTTACA+AGG | - | chr5_3:3009964-3009983 | Msa0791920:intron | 30.0% | |
| !! | TTTTTCAAACTAGCTACACA+TGG | + | chr5_3:3010004-3010023 | None:intergenic | 30.0% |
| ! | TGTAGCTAGTTTGAAAAAGA+TGG | - | chr5_3:3010006-3010025 | Msa0791920:intron | 30.0% |
| GTACATGAAAAGATTGACAA+TGG | - | chr5_3:3010396-3010415 | Msa0791920:intron | 30.0% | |
| TTGCACATTAGGAGAATTTA+TGG | + | chr5_3:3010604-3010623 | None:intergenic | 30.0% | |
| ! | CTACTCATCATATGTTCTTT+TGG | + | chr5_3:3010633-3010652 | None:intergenic | 30.0% |
| CAAAAGAACATATGATGAGT+AGG | - | chr5_3:3010631-3010650 | Msa0791920:intron | 30.0% | |
| AAGTCTAATAAGCTAAGTAC+CGG | - | chr5_3:3010694-3010713 | Msa0791920:intron | 30.0% | |
| ACATCTTCAATTCAAAGTGT+TGG | + | chr5_3:3010722-3010741 | None:intergenic | 30.0% | |
| ATTCGGTACTTTAATCCAAA+AGG | - | chr5_3:3011576-3011595 | Msa0791920:five_prime_UTR | 30.0% | |
| TTCGGTACTTTAATCCAAAA+GGG | - | chr5_3:3011577-3011596 | Msa0791920:five_prime_UTR | 30.0% | |
| ! | GAAATGTATAATGGAGGAGA+AGG | + | chr5_3:3001598-3001617 | None:intergenic | 35.0% |
| GAGTTGGAAATGTATAATGG+AGG | + | chr5_3:3001604-3001623 | None:intergenic | 35.0% | |
| CCTGCACAAACAAAGAAAAT+TGG | + | chr5_3:3001732-3001751 | None:intergenic | 35.0% | |
| !! | CCAATTTTCTTTGTTTGTGC+AGG | - | chr5_3:3001729-3001748 | Msa0791920:three_prime_UTR | 35.0% |
| ! | TCAAAGAGATTTTGTTGGCA+TGG | - | chr5_3:3001847-3001866 | Msa0791920:three_prime_UTR | 35.0% |
| TATACATCAAGTTCTTAGGC+AGG | - | chr5_3:3001906-3001925 | Msa0791920:exon | 35.0% | |
| ! | TAAGTATCGCTGAATGAGTA+AGG | + | chr5_3:3002073-3002092 | None:intergenic | 35.0% |
| ! | AAGGGAATGTAGCCTTAAAT+TGG | - | chr5_3:3002291-3002310 | Msa0791920:intron | 35.0% |
| ! | AGGGAATGTAGCCTTAAATT+GGG | - | chr5_3:3002292-3002311 | Msa0791920:intron | 35.0% |
| TCATGCAATGCAATGATAGA+TGG | + | chr5_3:3002336-3002355 | None:intergenic | 35.0% | |
| TGCATGAAGCTAGAAATCAT+TGG | - | chr5_3:3002349-3002368 | Msa0791920:intron | 35.0% | |
| GTTGTTTGCATTTGCTCTTA+TGG | - | chr5_3:3002491-3002510 | Msa0791920:intron | 35.0% | |
| !! | ACAAAGTACTGAGTAGCAAA+CGG | - | chr5_3:3002516-3002535 | Msa0791920:intron | 35.0% |
| AATTTATGTCCTGTCACATG+TGG | - | chr5_3:3002588-3002607 | Msa0791920:CDS | 35.0% | |
| !! | TCTATCGGTTTCAACAAAAG+GGG | + | chr5_3:3003023-3003042 | None:intergenic | 35.0% |
| !! | CTCTATCGGTTTCAACAAAA+GGG | + | chr5_3:3003024-3003043 | None:intergenic | 35.0% |
| !! | TCTCTATCGGTTTCAACAAA+AGG | + | chr5_3:3003025-3003044 | None:intergenic | 35.0% |
| GACACAACAAATCATAGACT+TGG | + | chr5_3:3003204-3003223 | None:intergenic | 35.0% | |
| GAGTGACACACAATATTGAT+GGG | + | chr5_3:3003604-3003623 | None:intergenic | 35.0% | |
| AGAGTGACACACAATATTGA+TGG | + | chr5_3:3003605-3003624 | None:intergenic | 35.0% | |
| ! | ACTAGTGTCCTTTAAGTTTG+AGG | + | chr5_3:3003742-3003761 | None:intergenic | 35.0% |
| GAAAAGTGGTAAGCACTAAA+AGG | - | chr5_3:3003829-3003848 | Msa0791920:CDS | 35.0% | |
| AATGAAGTGTGTAATGAGTG+TGG | - | chr5_3:3004205-3004224 | Msa0791920:intron | 35.0% | |
| ATGAAGTGTGTAATGAGTGT+GGG | - | chr5_3:3004206-3004225 | Msa0791920:intron | 35.0% | |
| TCTCACCTTAATAATGCATC+GGG | - | chr5_3:3004300-3004319 | Msa0791920:intron | 35.0% | |
| TATGGCTAATGATATTTGGG+TGG | + | chr5_3:3004427-3004446 | None:intergenic | 35.0% | |
| ! | TTTTTCACTGGTCAATTACC+AGG | + | chr5_3:3004617-3004636 | None:intergenic | 35.0% |
| ! | ATGTGCTCAATGTTTTTCAC+TGG | + | chr5_3:3004629-3004648 | None:intergenic | 35.0% |
| AACACTTGTCATCAGATGAA+TGG | + | chr5_3:3004743-3004762 | None:intergenic | 35.0% | |
| CACTCACACAAATGGAAAAA+AGG | + | chr5_3:3004861-3004880 | None:intergenic | 35.0% | |
| TTTAGACACACTCACACAAA+TGG | + | chr5_3:3004869-3004888 | None:intergenic | 35.0% | |
| ! | TTCTTTTCATCCAGTGTTTC+AGG | - | chr5_3:3004936-3004955 | Msa0791920:CDS | 35.0% |
| GAGTTAATATCCTGAAACAC+TGG | + | chr5_3:3004949-3004968 | None:intergenic | 35.0% | |
| AGACTATTACATAACATGCG+GGG | + | chr5_3:3005245-3005264 | None:intergenic | 35.0% | |
| ! | ATAGTCTTAGCTTCAATTCG+TGG | - | chr5_3:3005258-3005277 | Msa0791920:intron | 35.0% |
| GTCAATTAGACGTGAAGATA+AGG | - | chr5_3:3005282-3005301 | Msa0791920:intron | 35.0% | |
| TTAGACGTGAAGATAAGGAA+AGG | - | chr5_3:3005287-3005306 | Msa0791920:intron | 35.0% | |
| ATCTCTTGGAAGTTTAAGGA+GGG | + | chr5_3:3005429-3005448 | None:intergenic | 35.0% | |
| AATCTCTTGGAAGTTTAAGG+AGG | + | chr5_3:3005430-3005449 | None:intergenic | 35.0% | |
| GTTCACTATGTTCTTATGGA+AGG | + | chr5_3:3005727-3005746 | None:intergenic | 35.0% | |
| TCTCGTTCACTATGTTCTTA+TGG | + | chr5_3:3005731-3005750 | None:intergenic | 35.0% | |
| TGCGAAGTCATATGGAATTT+AGG | + | chr5_3:3005915-3005934 | None:intergenic | 35.0% | |
| TGACTTCGCAGTTAATATTG+AGG | - | chr5_3:3005925-3005944 | Msa0791920:intron | 35.0% | |
| GACTTCGCAGTTAATATTGA+GGG | - | chr5_3:3005926-3005945 | Msa0791920:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | + | chr5_3:3006087-3006106 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr5_3:3006088-3006107 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5_3:3006101-3006120 | None:intergenic | 35.0% | |
| GAAAATGGATCAGTTATTCC+GGG | - | chr5_3:3006269-3006288 | Msa0791920:intron | 35.0% | |
| CGAATTCAGATCATGACTTT+AGG | + | chr5_3:3006701-3006720 | None:intergenic | 35.0% | |
| ! | GTGTCTTATTCAACTTGTGT+TGG | + | chr5_3:3006787-3006806 | None:intergenic | 35.0% |
| ! | ACCTTACGTCACTTTCTATT+GGG | - | chr5_3:3006880-3006899 | Msa0791920:intron | 35.0% |
| GTTGAAGATGACATAGCTTA+AGG | - | chr5_3:3006938-3006957 | Msa0791920:intron | 35.0% | |
| !! | TATACAGTTGTTTTCACCGT+TGG | - | chr5_3:3007394-3007413 | Msa0791920:intron | 35.0% |
| CTATCAATCTCCTTTGTACA+TGG | - | chr5_3:3007733-3007752 | Msa0791920:intron | 35.0% | |
| ACAAGTATCACCATGTACAA+AGG | + | chr5_3:3007746-3007765 | None:intergenic | 35.0% | |
| GTGATACTTGTGTATCGTTT+AGG | - | chr5_3:3007755-3007774 | Msa0791920:intron | 35.0% | |
| AGGTTCTATGTGTTCATCTA+TGG | - | chr5_3:3007775-3007794 | Msa0791920:intron | 35.0% | |
| ACACTCATACATAACACACA+CGG | - | chr5_3:3007820-3007839 | Msa0791920:intron | 35.0% | |
| TGTATGTATGCTGTTGTAAC+AGG | + | chr5_3:3007888-3007907 | None:intergenic | 35.0% | |
| TGATGTTTCAACACACTTCT+TGG | + | chr5_3:3008041-3008060 | None:intergenic | 35.0% | |
| !!! | ACAATTTCTGGTGGTGTTTT+TGG | + | chr5_3:3008167-3008186 | None:intergenic | 35.0% |
| ACTTTCAACCTCTTCTTCAA+TGG | + | chr5_3:3008303-3008322 | None:intergenic | 35.0% | |
| ! | GAAGCTAAGATATCAGCTTT+TGG | - | chr5_3:3008581-3008600 | Msa0791920:intron | 35.0% |
| !! | TTGATTTGCTTCAAAGTGCA+TGG | - | chr5_3:3008651-3008670 | Msa0791920:intron | 35.0% |
| AAAATTGGCCAACACTCAAA+AGG | - | chr5_3:3009174-3009193 | Msa0791920:intron | 35.0% | |
| CTTTGTGTCCTGATTCTTTA+AGG | + | chr5_3:3009227-3009246 | None:intergenic | 35.0% | |
| GACACAAAGAAAGACTTGAA+AGG | - | chr5_3:3009238-3009257 | Msa0791920:intron | 35.0% | |
| AGGAGAAATTCAAAACCGAT+CGG | - | chr5_3:3009312-3009331 | Msa0791920:intron | 35.0% | |
| TGGCCATTATTTCCAGATTA+GGG | - | chr5_3:3009424-3009443 | Msa0791920:intron | 35.0% | |
| ACAAAAGGGGAGTTCATTAA+TGG | - | chr5_3:3009458-3009477 | Msa0791920:intron | 35.0% | |
| !! | AAGTTTGTTGATTGGCTTGA+TGG | - | chr5_3:3009533-3009552 | Msa0791920:intron | 35.0% |
| CTGCCAAAGTTATTTATTGG+TGG | - | chr5_3:3009580-3009599 | Msa0791920:intron | 35.0% | |
| CTTAGTAGCTTCTTATGATC+CGG | - | chr5_3:3009830-3009849 | Msa0791920:intron | 35.0% | |
| !! | CTGTCTTGAAGCATTTTAAG+TGG | - | chr5_3:3009876-3009895 | Msa0791920:intron | 35.0% |
| ! | TACTGATATGGCAGATTTTC+AGG | - | chr5_3:3010080-3010099 | Msa0791920:intron | 35.0% |
| ATTCTTTCCATCGTTGTGAT+AGG | - | chr5_3:3010115-3010134 | Msa0791920:intron | 35.0% | |
| TGATTCAGGAATATCAAGCA+AGG | - | chr5_3:3010227-3010246 | Msa0791920:intron | 35.0% | |
| AATGACTCTAATACCCCTAT+TGG | - | chr5_3:3010287-3010306 | Msa0791920:intron | 35.0% | |
| AAGCATTTCAAAGGCCAATA+GGG | + | chr5_3:3010304-3010323 | None:intergenic | 35.0% | |
| TAAGCATTTCAAAGGCCAAT+AGG | + | chr5_3:3010305-3010324 | None:intergenic | 35.0% | |
| ACCATTTATGCAGATAAAGC+AGG | - | chr5_3:3010351-3010370 | Msa0791920:intron | 35.0% | |
| GAGAATCTTGACTAGATTCT+CGG | + | chr5_3:3010447-3010466 | None:intergenic | 35.0% | |
| TCAAGATTCTCTTCTACTAC+AGG | - | chr5_3:3010456-3010475 | Msa0791920:intron | 35.0% | |
| CAAGATTCTCTTCTACTACA+GGG | - | chr5_3:3010457-3010476 | Msa0791920:intron | 35.0% | |
| ! | CTCATCATATGTTCTTTTGG+TGG | + | chr5_3:3010630-3010649 | None:intergenic | 35.0% |
| TGAGTAGGTTTACTACAATC+AGG | - | chr5_3:3010646-3010665 | Msa0791920:intron | 35.0% | |
| CTTTGAATTGAAGATGTGTG+TGG | - | chr5_3:3010725-3010744 | Msa0791920:intron | 35.0% | |
| !!! | ATTGTTTTGTAGTTTGCTGG+AGG | - | chr5_3:3011044-3011063 | Msa0791920:intron | 35.0% |
| AGAAAGTAAACTCCAATCCA+TGG | - | chr5_3:3011306-3011325 | Msa0791920:intron | 35.0% | |
| TTTCATAGCAGACTTATCCA+TGG | + | chr5_3:3011326-3011345 | None:intergenic | 35.0% | |
| CAATCTAGGAATAGGATCTT+CGG | - | chr5_3:3011364-3011383 | Msa0791920:five_prime_UTR | 35.0% | |
| TTGTAGGGGGTTGAGTATAT+AGG | + | chr5_3:3001557-3001576 | None:intergenic | 40.0% | |
| TGGGGAGAAAAAGAGTTGTA+GGG | + | chr5_3:3001572-3001591 | None:intergenic | 40.0% | |
| ATGGGGAGAAAAAGAGTTGT+AGG | + | chr5_3:3001573-3001592 | None:intergenic | 40.0% | |
| ! | ATAATGGAGGAGAAGGCTAT+GGG | + | chr5_3:3001591-3001610 | None:intergenic | 40.0% |
| ! | TATAATGGAGGAGAAGGCTA+TGG | + | chr5_3:3001592-3001611 | None:intergenic | 40.0% |
| ! | AATTGGTACCTTGGCTTTCA+TGG | + | chr5_3:3001715-3001734 | None:intergenic | 40.0% |
| ! | ATGGCTTGGAAAGGATTTCT+TGG | - | chr5_3:3001866-3001885 | Msa0791920:three_prime_UTR | 40.0% |
| !!! | AGCTGGTACGTTAGTTTTTC+AGG | - | chr5_3:3002039-3002058 | Msa0791920:intron | 40.0% |
| TCAGCGATACTTAACTTACC+AGG | - | chr5_3:3002080-3002099 | Msa0791920:intron | 40.0% | |
| GTTGTCTCAAGTGAGTAGTT+CGG | + | chr5_3:3002110-3002129 | None:intergenic | 40.0% | |
| GAACTACTCACTTGAGACAA+CGG | - | chr5_3:3002109-3002128 | Msa0791920:intron | 40.0% | |
| AACTACTCACTTGAGACAAC+GGG | - | chr5_3:3002110-3002129 | Msa0791920:intron | 40.0% | |
| TGCTTCTGCACTTTCTTTCA+CGG | - | chr5_3:3002614-3002633 | Msa0791920:CDS | 40.0% | |
| AACACCAACCAATTCACCTT+TGG | - | chr5_3:3002679-3002698 | Msa0791920:CDS | 40.0% | |
| TATGCCAAAGGTGAATTGGT+TGG | + | chr5_3:3002686-3002705 | None:intergenic | 40.0% | |
| CGTATATGCCAAAGGTGAAT+TGG | + | chr5_3:3002690-3002709 | None:intergenic | 40.0% | |
| AGTTATGGCCCCTATACATT+TGG | - | chr5_3:3002863-3002882 | Msa0791920:CDS | 40.0% | |
| GACACACAATATTGATGGGA+GGG | + | chr5_3:3003600-3003619 | None:intergenic | 40.0% | |
| TGACACACAATATTGATGGG+AGG | + | chr5_3:3003601-3003620 | None:intergenic | 40.0% | |
| ! | TCGGTTAATTTTCATTCCGG+TGG | + | chr5_3:3003653-3003672 | None:intergenic | 40.0% |
| ! | TGGTAAGCACTAAAAGGTGT+TGG | - | chr5_3:3003835-3003854 | Msa0791920:CDS | 40.0% |
| !! | GGTAAGCACTAAAAGGTGTT+GGG | - | chr5_3:3003836-3003855 | Msa0791920:CDS | 40.0% |
| !! | GTAAGCACTAAAAGGTGTTG+GGG | - | chr5_3:3003837-3003856 | Msa0791920:CDS | 40.0% |
| AAAGTAGCCACGCAAATCTA+AGG | + | chr5_3:3004019-3004038 | None:intergenic | 40.0% | |
| !!! | AGATTTGCGTGGCTACTTTT+TGG | - | chr5_3:3004020-3004039 | Msa0791920:CDS | 40.0% |
| !! | GGAGAAAGGTGTCCAAATAT+CGG | - | chr5_3:3004227-3004246 | Msa0791920:intron | 40.0% |
| AGGTGTCCAAATATCGGATT+TGG | - | chr5_3:3004233-3004252 | Msa0791920:intron | 40.0% | |
| GAGGATCCAAATCCGATATT+TGG | + | chr5_3:3004242-3004261 | None:intergenic | 40.0% | |
| GTGACTAAGCAAGTTGTTTG+TGG | - | chr5_3:3004906-3004925 | Msa0791920:CDS | 40.0% | |
| GACTATTACATAACATGCGG+GGG | + | chr5_3:3005244-3005263 | None:intergenic | 40.0% | |
| GATAAGGAAAGGAATGCGAT+AGG | - | chr5_3:3005298-3005317 | Msa0791920:intron | 40.0% | |
| TAACCAAACCAATCTACCCT+TGG | - | chr5_3:3005606-3005625 | Msa0791920:intron | 40.0% | |
| ACATCACACATGTCTTCCAA+GGG | + | chr5_3:3005625-3005644 | None:intergenic | 40.0% | |
| AACATCACACATGTCTTCCA+AGG | + | chr5_3:3005626-3005645 | None:intergenic | 40.0% | |
| TGAGCAACTAGAAGTGAGAA+AGG | - | chr5_3:3005782-3005801 | Msa0791920:intron | 40.0% | |
| TGACTAAGTGGTTGTGTTGT+GGG | + | chr5_3:3006000-3006019 | None:intergenic | 40.0% | |
| ATGACTAAGTGGTTGTGTTG+TGG | + | chr5_3:3006001-3006020 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr5_3:3006085-3006104 | Msa0791920:intron | 40.0% | |
| AAGTCATGATCTGAATTCGG+TGG | - | chr5_3:3006702-3006721 | Msa0791920:intron | 40.0% | |
| AGAGACACATTGATAGACCT+AGG | - | chr5_3:3006743-3006762 | Msa0791920:intron | 40.0% | |
| ! | CACCTTACGTCACTTTCTAT+TGG | - | chr5_3:3006879-3006898 | Msa0791920:intron | 40.0% |
| ! | CCTTACGTCACTTTCTATTG+GGG | - | chr5_3:3006881-3006900 | Msa0791920:intron | 40.0% |
| !! | TGGCTAGCTTTAAATCGTCA+AGG | - | chr5_3:3006904-3006923 | Msa0791920:intron | 40.0% |
| TGTCAATTAAATTGGGACGG+AGG | + | chr5_3:3007077-3007096 | None:intergenic | 40.0% | |
| GGCTTATCAGATGAAGTCTA+TGG | - | chr5_3:3007342-3007361 | Msa0791920:intron | 40.0% | |
| TGCCGCAAGTCTAAAAAAGT+TGG | - | chr5_3:3007536-3007555 | Msa0791920:intron | 40.0% | |
| CACTCATACATAACACACAC+GGG | - | chr5_3:3007821-3007840 | Msa0791920:intron | 40.0% | |
| !! | TGTTGGTGTTTTCTGCTTCA+TGG | + | chr5_3:3008000-3008019 | None:intergenic | 40.0% |
| GTGGTTGTAGTTGTTGATGT+TGG | + | chr5_3:3008017-3008036 | None:intergenic | 40.0% | |
| TTTCAACACACTTCTTGGTG+TGG | + | chr5_3:3008036-3008055 | None:intergenic | 40.0% | |
| !! | AAACGTGTTGTTGCTGTTTG+TGG | + | chr5_3:3008110-3008129 | None:intergenic | 40.0% |
| GAATTGTTCTTCATGTCTGG+AGG | + | chr5_3:3008239-3008258 | None:intergenic | 40.0% | |
| AGAGGTTGAAAGTTCTCACA+AGG | - | chr5_3:3008310-3008329 | Msa0791920:intron | 40.0% | |
| GAGGTTGAAAGTTCTCACAA+GGG | - | chr5_3:3008311-3008330 | Msa0791920:intron | 40.0% | |
| TCTTTCTTCTCCTTCACATC+AGG | + | chr5_3:3008410-3008429 | None:intergenic | 40.0% | |
| GATCAAAAGTTTGCAGTCTG+AGG | - | chr5_3:3008463-3008482 | Msa0791920:intron | 40.0% | |
| ! | AAGTTTGCAGTCTGAGGTTA+AGG | - | chr5_3:3008469-3008488 | Msa0791920:intron | 40.0% |
| TGATATCTTAGCTTCAGCAG+AGG | + | chr5_3:3008576-3008595 | None:intergenic | 40.0% | |
| TGGCACTAGTAGTACTAGAA+AGG | - | chr5_3:3008601-3008620 | Msa0791920:intron | 40.0% | |
| TGAATGAAGAAGGAGCCAAT+TGG | - | chr5_3:3008896-3008915 | Msa0791920:intron | 40.0% | |
| TGAAACAGTTGGACAATTGC+AGG | + | chr5_3:3009202-3009221 | None:intergenic | 40.0% | |
| TTGTGTGCACTGTTAGCTAT+CGG | + | chr5_3:3009283-3009302 | None:intergenic | 40.0% | |
| AGTGCACACAATAGCATTGT+AGG | - | chr5_3:3009292-3009311 | Msa0791920:intron | 40.0% | |
| TGAGTGATGACTGATATGAC+TGG | - | chr5_3:3009404-3009423 | Msa0791920:intron | 40.0% | |
| CTGGCCATTATTTCCAGATT+AGG | - | chr5_3:3009423-3009442 | Msa0791920:intron | 40.0% | |
| CCTCCCTAATCTGGAAATAA+TGG | + | chr5_3:3009430-3009449 | None:intergenic | 40.0% | |
| CCATTATTTCCAGATTAGGG+AGG | - | chr5_3:3009427-3009446 | Msa0791920:intron | 40.0% | |
| TTTGAATGTCCTCCCTAATC+TGG | + | chr5_3:3009439-3009458 | None:intergenic | 40.0% | |
| AGGGAGGACATTCAAACAAA+AGG | - | chr5_3:3009443-3009462 | Msa0791920:intron | 40.0% | |
| GGGAGGACATTCAAACAAAA+GGG | - | chr5_3:3009444-3009463 | Msa0791920:intron | 40.0% | |
| GGAGGACATTCAAACAAAAG+GGG | - | chr5_3:3009445-3009464 | Msa0791920:intron | 40.0% | |
| !! | ACGTCCTCAAGTTTGTTGAT+TGG | - | chr5_3:3009525-3009544 | Msa0791920:intron | 40.0% |
| CAAGCCAATCAACAAACTTG+AGG | + | chr5_3:3009532-3009551 | None:intergenic | 40.0% | |
| ! | TGATGGTGAACTATCCACTT+TGG | - | chr5_3:3009550-3009569 | Msa0791920:intron | 40.0% |
| TTGGCAGAAACTTACCAAAG+TGG | + | chr5_3:3009567-3009586 | None:intergenic | 40.0% | |
| GGCCCACCAATAAATAACTT+TGG | + | chr5_3:3009586-3009605 | None:intergenic | 40.0% | |
| ! | GTTTGGCCTAACTTCTTTTG+AGG | - | chr5_3:3009734-3009753 | Msa0791920:intron | 40.0% |
| TAGCTACACATGGAATGTCA+GGG | + | chr5_3:3009994-3010013 | None:intergenic | 40.0% | |
| !! | TGATATGGCAGATTTTCAGG+TGG | - | chr5_3:3010083-3010102 | Msa0791920:intron | 40.0% |
| AGCATTTCAAAGGCCAATAG+GGG | + | chr5_3:3010303-3010322 | None:intergenic | 40.0% | |
| GCCTGCTTTATCTGCATAAA+TGG | + | chr5_3:3010355-3010374 | None:intergenic | 40.0% | |
| TTCTCGGTCTGAATTTCGAA+TGG | + | chr5_3:3010431-3010450 | None:intergenic | 40.0% | |
| !! | TCAATTCAAAGTGTTGGTGC+CGG | + | chr5_3:3010716-3010735 | None:intergenic | 40.0% |
| TTGAAGATGTGTGTGGTGTA+CGG | - | chr5_3:3010732-3010751 | Msa0791920:intron | 40.0% | |
| TTGTGTGTCAATGTCATGTC+CGG | - | chr5_3:3010824-3010843 | Msa0791920:intron | 40.0% | |
| ACAATGTTAGAACAGCAACC+TGG | + | chr5_3:3011017-3011036 | None:intergenic | 40.0% | |
| !! | TTTGTAGTTTGCTGGAGGTT+TGG | - | chr5_3:3011049-3011068 | Msa0791920:intron | 40.0% |
| TCACAAAATCCTCTGAGTGA+GGG | + | chr5_3:3011286-3011305 | None:intergenic | 40.0% | |
| TTCACAAAATCCTCTGAGTG+AGG | + | chr5_3:3011287-3011306 | None:intergenic | 40.0% | |
| TAGCAGACTTATCCATGGAT+TGG | + | chr5_3:3011321-3011340 | None:intergenic | 40.0% | |
| CTATTCCTAGATTGTGAGAC+AGG | + | chr5_3:3011358-3011377 | None:intergenic | 40.0% | |
| CTGTCTCACAATCTAGGAAT+AGG | - | chr5_3:3011356-3011375 | Msa0791920:five_prime_UTR | 40.0% | |
| GGGAGAAAAAGAGTTGTAGG+GGG | + | chr5_3:3001570-3001589 | None:intergenic | 45.0% | |
| GGGGAGAAAAAGAGTTGTAG+GGG | + | chr5_3:3001571-3001590 | None:intergenic | 45.0% | |
| TAATGGAGGAGAAGGCTATG+GGG | + | chr5_3:3001590-3001609 | None:intergenic | 45.0% | |
| GGACTAATCCATGAAAGCCA+AGG | - | chr5_3:3001704-3001723 | Msa0791920:three_prime_UTR | 45.0% | |
| ! | GAGATTTTGTTGGCATGGCT+TGG | - | chr5_3:3001852-3001871 | Msa0791920:three_prime_UTR | 45.0% |
| ! | TTTGTTGGCATGGCTTGGAA+AGG | - | chr5_3:3001857-3001876 | Msa0791920:three_prime_UTR | 45.0% |
| TCTCAAGTGAGTAGTTCGGT+TGG | + | chr5_3:3002106-3002125 | None:intergenic | 45.0% | |
| !! | AAGTACTGAGTAGCAAACGG+TGG | - | chr5_3:3002519-3002538 | Msa0791920:intron | 45.0% |
| GAAGCATATCCACATGTGAC+AGG | + | chr5_3:3002600-3002619 | None:intergenic | 45.0% | |
| !! | TAAAAGGTGTTGGGGCCTAT+CGG | - | chr5_3:3003845-3003864 | Msa0791920:CDS | 45.0% |
| TCCTATGCCTTAGATTTGCG+TGG | - | chr5_3:3004009-3004028 | Msa0791920:CDS | 45.0% | |
| !!! | TTGCGTGGCTACTTTTTGGA+TGG | - | chr5_3:3004024-3004043 | Msa0791920:CDS | 45.0% |
| GTGTAATGAGTGTGGGAGAA+AGG | - | chr5_3:3004213-3004232 | Msa0791920:intron | 45.0% | |
| ! | CTTCCAAGGGTAGATTGGTT+TGG | + | chr5_3:3005612-3005631 | None:intergenic | 45.0% |
| CATGTCTTCCAAGGGTAGAT+TGG | + | chr5_3:3005617-3005636 | None:intergenic | 45.0% | |
| ATATACTACTACCTCCGTCC+CGG | - | chr5_3:3006066-3006085 | Msa0791920:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr5_3:3006083-3006102 | None:intergenic | 45.0% | |
| ATGGATCAGTTATTCCGGGA+CGG | - | chr5_3:3006273-3006292 | Msa0791920:intron | 45.0% | |
| ! | CCTTTTCTCGGTTCAACACA+AGG | + | chr5_3:3006498-3006517 | None:intergenic | 45.0% |
| CCTTGTGTTGAACCGAGAAA+AGG | - | chr5_3:3006495-3006514 | Msa0791920:intron | 45.0% | |
| CCCCAATAGAAAGTGACGTA+AGG | + | chr5_3:3006884-3006903 | None:intergenic | 45.0% | |
| ! | TACGTCACTTTCTATTGGGG+TGG | - | chr5_3:3006884-3006903 | Msa0791920:intron | 45.0% |
| GAAAATGGGTCAGTCATTCC+TGG | - | chr5_3:3007268-3007287 | Msa0791920:intron | 45.0% | |
| TCTCACAAGGGTAGTAGAGA+AGG | - | chr5_3:3008323-3008342 | Msa0791920:intron | 45.0% | |
| TAGAGAAGGTGAAGTGGCTA+AGG | - | chr5_3:3008337-3008356 | Msa0791920:intron | 45.0% | |
| GAAGGAGAAGAAAGAGTTGC+TGG | - | chr5_3:3008415-3008434 | Msa0791920:intron | 45.0% | |
| ! | AATTTTGCCATAGGCCGAGA+GGG | + | chr5_3:3009160-3009179 | None:intergenic | 45.0% |
| !! | GTGTTGGCCAATTTTGCCAT+AGG | + | chr5_3:3009169-3009188 | None:intergenic | 45.0% |
| CTGCTAAAAGATGAGCCGAT+CGG | + | chr5_3:3009330-3009349 | None:intergenic | 45.0% | |
| GACGTCTTCAATGTCCACAT+AGG | + | chr5_3:3009510-3009529 | None:intergenic | 45.0% | |
| CTTATGATCCGGTATTGTGC+AGG | - | chr5_3:3009841-3009860 | Msa0791920:intron | 45.0% | |
| ATCGCATCAGCTTTCTTCTC+AGG | + | chr5_3:3009902-3009921 | None:intergenic | 45.0% | |
| CTAGCTACACATGGAATGTC+AGG | + | chr5_3:3009995-3010014 | None:intergenic | 45.0% | |
| ATCGTTGTGATAGGTCTGAG+CGG | - | chr5_3:3010124-3010143 | Msa0791920:intron | 45.0% | |
| TGTACAACATTCCAACTGCG+TGG | - | chr5_3:3010199-3010218 | Msa0791920:intron | 45.0% | |
| ! | TTTTGCTTACAGAGCCCATC+AGG | - | chr5_3:3010486-3010505 | Msa0791920:intron | 45.0% |
| ! | TTTGGTGGCACTTGCACATT+AGG | + | chr5_3:3010615-3010634 | None:intergenic | 45.0% |
| ATTGACATGGATACAGACGC+CGG | + | chr5_3:3010846-3010865 | None:intergenic | 45.0% | |
| GAGATAAGACAACGTGTACC+AGG | - | chr5_3:3011098-3011117 | Msa0791920:intron | 45.0% | |
| AGTATGAAACCCTCACTCAG+AGG | - | chr5_3:3011274-3011293 | Msa0791920:intron | 45.0% | |
| TACAGCCTGTCTCACAATCT+AGG | - | chr5_3:3011350-3011369 | Msa0791920:five_prime_UTR | 45.0% | |
| !!! | TTAATTAAATAATTTTTCTT+TGG | - | chr5_3:3001980-3001999 | Msa0791920:CDS | 5.0% |
| !!! | TAATTAAGTTAATTTTTTTA+AGG | + | chr5_3:3002924-3002943 | None:intergenic | 5.0% |
| !!! | TTTATCAATTTTTTTAATAT+CGG | + | chr5_3:3003672-3003691 | None:intergenic | 5.0% |
| !!! | ACATTTTATATTATAAAAAT+AGG | + | chr5_3:3003774-3003793 | None:intergenic | 5.0% |
| !! | AAAAAAATATATAAATAAAG+AGG | - | chr5_3:3007121-3007140 | Msa0791920:intron | 5.0% |
| ! | GCCACGCAAATCTAAGGCAT+AGG | + | chr5_3:3004013-3004032 | None:intergenic | 50.0% |
| ATCAGTTATTCCGGGACGGA+GGG | - | chr5_3:3006277-3006296 | Msa0791920:intron | 50.0% | |
| ! | ATCTGAATTCGGTGGTCGAG+TGG | - | chr5_3:3006710-3006729 | Msa0791920:intron | 50.0% |
| ACGTAAGGTGAACAGACACG+AGG | + | chr5_3:3006869-3006888 | None:intergenic | 50.0% | |
| ATGGGTCAGTCATTCCTGGA+CGG | - | chr5_3:3007272-3007291 | Msa0791920:intron | 50.0% | |
| GGGTAGTAGAGAAGGTGAAG+TGG | - | chr5_3:3008331-3008350 | Msa0791920:intron | 50.0% | |
| ! | TTGTTGTTGTTGCTCCTCCG+CGG | - | chr5_3:3008360-3008379 | Msa0791920:intron | 50.0% |
| GGAGGATGATCCTGATGTGA+AGG | - | chr5_3:3008397-3008416 | Msa0791920:intron | 50.0% | |
| AGAGTTGCTGGAGAAGCTTG+AGG | - | chr5_3:3008427-3008446 | Msa0791920:intron | 50.0% | |
| ! | GTCTGAGGTTAAGGCCTTGA+AGG | - | chr5_3:3008478-3008497 | Msa0791920:intron | 50.0% |
| TCTTAGCTTCAGCAGAGGCA+AGG | + | chr5_3:3008571-3008590 | None:intergenic | 50.0% | |
| GGACTTTGGCGTTCTCCAAT+TGG | + | chr5_3:3008914-3008933 | None:intergenic | 50.0% | |
| AACTCCAACACCGAGTCATG+CGG | - | chr5_3:3009048-3009067 | Msa0791920:intron | 50.0% | |
| ! | CAATTTTGCCATAGGCCGAG+AGG | + | chr5_3:3009161-3009180 | None:intergenic | 50.0% |
| CTCTCGGCCTATGGCAAAAT+TGG | - | chr5_3:3009159-3009178 | Msa0791920:intron | 50.0% | |
| !! | TGCAGGAGCCTTTTGAGTGT+TGG | + | chr5_3:3009185-3009204 | None:intergenic | 50.0% |
| CTCATCAGCCTGCACAATAC+CGG | + | chr5_3:3009852-3009871 | None:intergenic | 50.0% | |
| !!! | ATGGCAGATTTTCAGGTGGC+AGG | - | chr5_3:3010087-3010106 | Msa0791920:intron | 50.0% |
| !!! | TGGCAGATTTTCAGGTGGCA+GGG | - | chr5_3:3010088-3010107 | Msa0791920:intron | 50.0% |
| GCTCAGACCTATCACAACGA+TGG | + | chr5_3:3010125-3010144 | None:intergenic | 50.0% | |
| GAATCAAGCATCCACGCAGT+TGG | + | chr5_3:3010213-3010232 | None:intergenic | 50.0% | |
| ACTGCGTGGATGCTTGATTC+AGG | - | chr5_3:3010213-3010232 | Msa0791920:intron | 50.0% | |
| ! | GTTTGCTGGAGGTTTGGACT+CGG | - | chr5_3:3011055-3011074 | Msa0791920:intron | 50.0% |
| AAAGTTCTCGAGACCCTGCT+AGG | + | chr5_3:3011127-3011146 | None:intergenic | 50.0% | |
| ! | AGTGAGTAGTTCGGTTGGCC+TGG | + | chr5_3:3002101-3002120 | None:intergenic | 55.0% |
| GGTCAATTATACCGGGACGG+AGG | + | chr5_3:3006080-3006099 | None:intergenic | 55.0% | |
| GATCAGTTATTCCGGGACGG+AGG | - | chr5_3:3006276-3006295 | Msa0791920:intron | 55.0% | |
| ACCAATTACTCCCTCCGTCC+CGG | + | chr5_3:3006290-3006309 | None:intergenic | 55.0% | |
| GTCAGTCATTCCTGGACGGA+GGG | - | chr5_3:3007276-3007295 | Msa0791920:intron | 55.0% | |
| ATAACACACTCCCTCCGTCC+AGG | + | chr5_3:3007289-3007308 | None:intergenic | 55.0% | |
| TTGGAGTTGGAGCTGGAGCT+GGG | + | chr5_3:3009036-3009055 | None:intergenic | 55.0% | |
| !! | GCATGACTCGGTGTTGGAGT+TGG | + | chr5_3:3009049-3009068 | None:intergenic | 55.0% |
| TCACGAATGGCCGCATGACT+CGG | + | chr5_3:3009061-3009080 | None:intergenic | 55.0% | |
| ATAGGCCGAGAGGGAATTGG+TGG | + | chr5_3:3009151-3009170 | None:intergenic | 55.0% | |
| ACCAATTCCCTCTCGGCCTA+TGG | - | chr5_3:3009150-3009169 | Msa0791920:intron | 55.0% | |
| GGTTGTTGACGCGTCCTATG+TGG | - | chr5_3:3009493-3009512 | Msa0791920:intron | 55.0% | |
| GAAAGCTGATGCGATGCGTG+AGG | - | chr5_3:3009907-3009926 | Msa0791920:intron | 55.0% | |
| !!! | GGCAGATTTTCAGGTGGCAG+GGG | - | chr5_3:3010089-3010108 | Msa0791920:intron | 55.0% |
| GTGTACCAGGACACCTAGCA+GGG | - | chr5_3:3011111-3011130 | Msa0791920:intron | 55.0% | |
| TCCGGGACGGAGGGAGTAAT+TGG | - | chr5_3:3006286-3006305 | Msa0791920:intron | 60.0% | |
| GGTCAGTCATTCCTGGACGG+AGG | - | chr5_3:3007275-3007294 | Msa0791920:intron | 60.0% | |
| TCCTCAATCCTCCTTCGCCG+CGG | + | chr5_3:3008380-3008399 | None:intergenic | 60.0% | |
| GTTGGAGTTGGAGCTGGAGC+TGG | + | chr5_3:3009037-3009056 | None:intergenic | 60.0% | |
| !! | CTCGGTGTTGGAGTTGGAGC+TGG | + | chr5_3:3009043-3009062 | None:intergenic | 60.0% |
| !! | ATGGCCGCATGACTCGGTGT+TGG | + | chr5_3:3009055-3009074 | None:intergenic | 60.0% |
| !! | CGAGAGGGAATTGGTGGTGG+CGG | + | chr5_3:3009145-3009164 | None:intergenic | 60.0% |
| CGCCACCACCAATTCCCTCT+CGG | - | chr5_3:3009143-3009162 | Msa0791920:intron | 60.0% | |
| GCCATAGGCCGAGAGGGAAT+TGG | + | chr5_3:3009154-3009173 | None:intergenic | 60.0% | |
| CGTGTACCAGGACACCTAGC+AGG | - | chr5_3:3011110-3011129 | Msa0791920:intron | 60.0% | |
| TTGTTGCTCCTCCGCGGCGA+AGG | - | chr5_3:3008366-3008385 | Msa0791920:intron | 65.0% | |
| TCAATCCTCCTTCGCCGCGG+AGG | + | chr5_3:3008377-3008396 | None:intergenic | 65.0% | |
| TCCGCGGCGAAGGAGGATTG+AGG | - | chr5_3:3008376-3008395 | Msa0791920:intron | 65.0% | |
| GCGGCGAAGGAGGATTGAGG+AGG | - | chr5_3:3008379-3008398 | Msa0791920:intron | 65.0% | |
| GGTGGCATGAGGCAGTGGCT+GGG | + | chr5_3:3009112-3009131 | None:intergenic | 65.0% | |
| AGGTGGCATGAGGCAGTGGC+TGG | + | chr5_3:3009113-3009132 | None:intergenic | 65.0% | |
| GTGGAGGTGGCATGAGGCAG+TGG | + | chr5_3:3009117-3009136 | None:intergenic | 65.0% | |
| !! | GAGGTGGTGGAGGTGGCATG+AGG | + | chr5_3:3009123-3009142 | None:intergenic | 65.0% |
| !! | ATTGGTGGTGGCGGAGGTGG+TGG | + | chr5_3:3009136-3009155 | None:intergenic | 65.0% |
| !! | GGAATTGGTGGTGGCGGAGG+TGG | + | chr5_3:3009139-3009158 | None:intergenic | 65.0% |
| !! | GAGGGAATTGGTGGTGGCGG+AGG | + | chr5_3:3009142-3009161 | None:intergenic | 65.0% |
| GGCCGAGAGGGAATTGGTGG+TGG | + | chr5_3:3009148-3009167 | None:intergenic | 65.0% | |
| CGAGACCCTGCTAGGTGTCC+TGG | + | chr5_3:3011119-3011138 | None:intergenic | 65.0% | |
| TTGCTCCTCCGCGGCGAAGG+AGG | - | chr5_3:3008369-3008388 | Msa0791920:intron | 70.0% | |
| GGCATGAGGCAGTGGCTGGG+TGG | + | chr5_3:3009109-3009128 | None:intergenic | 70.0% | |
| !! | GGTGGCGGAGGTGGTGGAGG+TGG | + | chr5_3:3009130-3009149 | None:intergenic | 75.0% |
| !! | GGTGGTGGCGGAGGTGGTGG+AGG | + | chr5_3:3009133-3009152 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 3001477 | 3011607 | 3001477 | ID=Msa0791920;Name=Msa0791920 |
| chr5_3 | mRNA | 3001477 | 3011607 | 3001477 | ID=Msa0791920-mRNA-1;Parent=Msa0791920;Name=Msa0791920-mRNA-1;_AED=0.14;_eAED=0.14;_QI=387|1|1|1|0.87|0.77|9|438|583 |
| chr5_3 | exon | 3001477 | 3002028 | 3001477 | ID=Msa0791920-mRNA-1:exon:1301;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3002577 | 3002720 | 3002577 | ID=Msa0791920-mRNA-1:exon:1300;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3002836 | 3002947 | 3002836 | ID=Msa0791920-mRNA-1:exon:1299;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3003040 | 3003221 | 3003040 | ID=Msa0791920-mRNA-1:exon:1298;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3003513 | 3003644 | 3003513 | ID=Msa0791920-mRNA-1:exon:1297;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3003736 | 3004179 | 3003736 | ID=Msa0791920-mRNA-1:exon:1296;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3004462 | 3005108 | 3004462 | ID=Msa0791920-mRNA-1:exon:1295;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3011157 | 3011246 | 3011157 | ID=Msa0791920-mRNA-1:exon:1294;Parent=Msa0791920-mRNA-1 |
| chr5_3 | exon | 3011334 | 3011607 | 3011334 | ID=Msa0791920-mRNA-1:exon:1293;Parent=Msa0791920-mRNA-1 |
| chr5_3 | five_prime_UTR | 3011334 | 3011607 | 3011334 | ID=Msa0791920-mRNA-1:five_prime_utr;Parent=Msa0791920-mRNA-1 |
| chr5_3 | five_prime_UTR | 3011157 | 3011246 | 3011157 | ID=Msa0791920-mRNA-1:five_prime_utr;Parent=Msa0791920-mRNA-1 |
| chr5_3 | five_prime_UTR | 3005086 | 3005108 | 3005086 | ID=Msa0791920-mRNA-1:five_prime_utr;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3004462 | 3005085 | 3004462 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3003736 | 3004179 | 3003736 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3003513 | 3003644 | 3003513 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3003040 | 3003221 | 3003040 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3002836 | 3002947 | 3002836 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3002577 | 3002720 | 3002577 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | CDS | 3001915 | 3002028 | 3001915 | ID=Msa0791920-mRNA-1:cds;Parent=Msa0791920-mRNA-1 |
| chr5_3 | three_prime_UTR | 3001477 | 3001914 | 3001477 | ID=Msa0791920-mRNA-1:three_prime_utr;Parent=Msa0791920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
