AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0842370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842370 MtrunA17_Chr5g0412871 98.753 481 6 0 1 481 1 481 0.0 982
Msa0842370 MtrunA17_Chr8g0345201 49.378 482 233 3 3 474 44 524 2.56e-166 479
Msa0842370 MtrunA17_Chr6g0475681 24.868 378 250 14 93 463 173 523 2.26e-22 100
Msa0842370 MtrunA17_Chr7g0248681 26.953 256 172 9 100 352 86 329 2.74e-19 90.5
Msa0842370 MtrunA17_Chr8g0387481 26.012 346 225 14 100 438 87 408 6.17e-19 89.4
Msa0842370 MtrunA17_Chr6g0488041 25.784 287 191 11 94 376 84 352 8.13e-19 88.6
Msa0842370 MtrunA17_Chr3g0135251 23.607 377 252 16 100 466 78 428 8.17e-19 89.0
Msa0842370 MtrunA17_Chr2g0324801 24.211 380 235 12 74 440 17 356 1.36e-18 87.4
Msa0842370 MtrunA17_Chr8g0389311 25.649 308 208 13 103 407 83 372 8.36e-18 85.5
Msa0842370 MtrunA17_Chr8g0389321 25.649 308 208 13 103 407 83 372 8.36e-18 85.5
Msa0842370 MtrunA17_Chr8g0360241 23.077 377 247 14 72 440 47 388 1.23e-17 85.1
Msa0842370 MtrunA17_Chr5g0400831 27.723 202 132 7 100 291 79 276 2.05e-16 81.6
Msa0842370 MtrunA17_Chr8g0348351 25.424 177 127 4 100 273 86 260 6.59e-16 80.1
Msa0842370 MtrunA17_Chr4g0054371 27.119 177 123 5 100 272 79 253 1.38e-15 79.0
Msa0842370 MtrunA17_Chr5g0398431 25.874 143 103 3 129 270 178 318 1.18e-12 70.1
Msa0842370 MtrunA17_Chr3g0114811 22.493 369 240 15 99 463 115 441 4.26e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842370 AT1G70580.4 84.823 481 73 0 1 481 1 481 0.0 866
Msa0842370 AT1G70580.2 84.823 481 73 0 1 481 1 481 0.0 866
Msa0842370 AT1G70580.3 84.823 481 73 0 1 481 1 481 0.0 866
Msa0842370 AT1G70580.1 84.823 481 73 0 1 481 1 481 0.0 866
Msa0842370 AT1G23310.1 84.200 481 76 0 1 481 1 481 0.0 861
Msa0842370 AT1G23310.2 84.738 439 67 0 1 439 1 439 0.0 788
Msa0842370 AT1G72330.1 49.582 478 230 3 5 472 62 538 3.02e-169 488
Msa0842370 AT1G72330.3 48.269 491 230 4 5 472 62 551 1.17e-165 479
Msa0842370 AT1G17290.1 49.583 480 231 3 5 474 65 543 5.93e-164 474
Msa0842370 AT1G72330.2 49.570 349 165 3 5 343 62 409 4.46e-116 348
Msa0842370 AT2G20610.1 24.930 357 226 14 97 447 98 418 5.58e-21 95.9
Msa0842370 AT5G51690.2 23.037 382 258 14 95 468 17 370 1.78e-20 93.6
Msa0842370 AT2G24850.1 24.074 378 242 13 97 466 81 421 1.83e-20 94.4
Msa0842370 AT5G51690.1 23.037 382 258 14 95 468 140 493 2.39e-20 94.4
Msa0842370 AT2G20610.2 24.633 341 218 13 97 431 98 405 1.39e-19 91.3
Msa0842370 AT5G36160.1 23.881 402 251 17 83 476 65 419 3.96e-19 89.7
Msa0842370 AT1G62960.1 24.084 382 254 17 99 471 202 556 6.25e-19 90.1
Msa0842370 AT4G11280.1 26.182 275 186 9 100 371 90 350 2.13e-17 85.1
Msa0842370 AT4G26200.1 25.703 249 175 7 47 291 43 285 9.32e-17 82.8
Msa0842370 AT4G28420.2 23.134 402 266 15 69 465 64 427 1.62e-16 82.0
Msa0842370 AT4G28410.1 23.097 381 238 12 74 440 77 416 1.59e-15 79.0
Msa0842370 AT4G23590.1 21.260 381 254 13 98 472 68 408 3.39e-15 77.8
Msa0842370 AT4G28420.1 25.000 240 163 6 69 308 64 286 4.75e-15 77.4
Msa0842370 AT4G08040.1 22.849 372 260 13 100 467 77 425 6.51e-15 77.4
Msa0842370 AT4G28410.2 22.400 375 236 11 74 434 77 410 1.16e-14 76.3
Msa0842370 AT5G53970.1 22.556 399 264 14 72 464 40 399 1.36e-14 75.9
Msa0842370 AT4G23600.1 21.359 412 247 19 85 477 60 413 8.74e-14 73.6
Msa0842370 AT5G65800.1 28.788 198 131 6 100 291 79 272 9.58e-14 73.6
Msa0842370 AT3G49700.1 28.283 198 132 6 100 291 79 272 1.19e-13 73.6
Msa0842370 AT4G37770.1 22.727 374 259 14 100 466 79 429 2.59e-13 72.4
Msa0842370 AT1G01480.1 22.316 354 240 16 100 443 87 415 6.10e-13 71.2
Msa0842370 AT4G23600.3 24.138 261 161 12 85 342 60 286 7.69e-12 67.4
Msa0842370 AT3G61510.1 24.103 195 138 6 82 273 70 257 1.47e-11 67.0
Msa0842370 AT1G01480.2 22.601 323 217 15 129 443 12 309 6.02e-11 64.7
Msa0842370 AT2G22810.1 26.286 175 123 5 100 270 79 251 8.03e-11 64.7

Find 149 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCTTCAACCTTATTATT+TGG 0.103405 5_4:-19421157 Msa0842370:three_prime_UTR
TGGCCTAGCTTTAGGCTTAA+AGG 0.222985 5_4:+19429230 None:intergenic
ACTGTTCCTGGCTCAGGATT+TGG 0.236800 5_4:-19422598 Msa0842370:CDS
ATTAATCGACTCATAGTCTA+AGG 0.247563 5_4:+19427809 None:intergenic
GGAAGAAATGCCTGCTATTA+TGG 0.271511 5_4:-19421614 Msa0842370:CDS
AGCTGGACTTCCTTGCTTAA+AGG 0.291078 5_4:+19424509 None:intergenic
GTGGTTCATGTTTGTTTGTT+TGG 0.292831 5_4:+19429343 None:intergenic
AATATTTGTGCTGGAACATT+TGG 0.293542 5_4:+19423510 None:intergenic
TTAGCAGTCTCTAAAGCTTT+TGG 0.293897 5_4:+19422685 None:intergenic
AAGCTTCAACCTTATTATTT+GGG 0.297059 5_4:-19421156 None:intergenic
TTACTACTGTCTCAAGCTTT+TGG 0.300237 5_4:-19422638 Msa0842370:CDS
TCATTCACATCGGGTGGTTT+AGG 0.306462 5_4:-19426631 Msa0842370:intron
TTTCTTACGACAAATTTGTT+AGG 0.315147 5_4:-19423344 Msa0842370:CDS
TCTGCAACAATTGCTCTTCT+TGG 0.315497 5_4:-19425032 Msa0842370:CDS
AAAGTTCAATGATGATTTCA+TGG 0.322465 5_4:-19421581 Msa0842370:CDS
TGTTGGAAACCCACATGCTT+TGG 0.325099 5_4:-19426953 Msa0842370:CDS
TGGTCATCTCCCAAATAATA+AGG 0.332599 5_4:+19421147 None:intergenic
CACTGGCCAGTAGGGTTTCC+AGG 0.336167 5_4:+19424767 None:intergenic
CCTCGAAGAGACAGCAAATT+GGG 0.336543 5_4:-19424988 Msa0842370:CDS
ACCCTTCATTAGTGCCAAAA+AGG 0.337700 5_4:-19424639 Msa0842370:intron
GCCACTTCCTTCCTCACTGC+TGG 0.358669 5_4:+19425423 None:intergenic
GTTAGAGAGGCTCGCTATAA+AGG 0.359225 5_4:-19424936 Msa0842370:CDS
AAGATGATTGTTTGCCATCA+TGG 0.374038 5_4:+19421379 None:intergenic
GCTTCAGAAGGAGGGCAAAA+AGG 0.374053 5_4:-19427727 Msa0842370:intron
GCTGTCTCTTCGAGGTAGTA+TGG 0.374958 5_4:+19424996 None:intergenic
ACCTCGAAGAGACAGCAAAT+TGG 0.375963 5_4:-19424989 Msa0842370:CDS
GGCCTAGCTTTAGGCTTAAA+GGG 0.384379 5_4:+19429231 None:intergenic
TCAGTGTCGAAAGGGTATTT+TGG 0.386014 5_4:-19424473 Msa0842370:CDS
GAAGAAAATTTAGTCTTGCT+TGG 0.393995 5_4:-19424701 Msa0842370:CDS
GTTGGAAACCCACATGCTTT+GGG 0.394384 5_4:-19426952 Msa0842370:CDS
GTAATATAGTTGTCCTCAAA+TGG 0.400999 5_4:+19421644 None:intergenic
AGCTTTAGAGACTGCTAAAC+AGG 0.401858 5_4:-19422680 Msa0842370:CDS
CAGATTATATTCACTAATGT+TGG 0.402510 5_4:-19426970 Msa0842370:CDS
ACTGGCATATCCACTGTTCC+TGG 0.402775 5_4:-19422610 Msa0842370:CDS
TTCTTCTATCAATCAATCTA+AGG 0.403616 5_4:-19428977 Msa0842370:intron
CCCAATTTGCTGTCTCTTCG+AGG 0.403674 5_4:+19424988 None:intergenic
TTACCAGACAAATATATATC+AGG 0.407014 5_4:-19424669 Msa0842370:CDS
ACAGGTTGTTGCCTTGTGCC+AGG 0.408208 5_4:-19426731 Msa0842370:intron
ATATCCACTGTTCCTGGCTC+AGG 0.412282 5_4:-19422604 Msa0842370:CDS
GTAAGAAATATCTCCAGGTT+TGG 0.421350 5_4:+19423359 None:intergenic
GACTCATAGTCTAAGGGCTT+TGG 0.425588 5_4:+19427816 None:intergenic
AGTATAATTATTTATTTATG+TGG 0.425635 5_4:+19429103 None:intergenic
ATGTAGCTGACTCCACTTAG+TGG 0.440316 5_4:-19421248 Msa0842370:three_prime_UTR
TTCTGTCCAAATCCTGAGCC+AGG 0.442611 5_4:+19422592 None:intergenic
CATCCTGATATATATTTGTC+TGG 0.447557 5_4:+19424666 None:intergenic
CTGACTCCACTTAGTGGATA+AGG 0.447784 5_4:-19421242 Msa0842370:three_prime_UTR
TAAGAAATATCTCCAGGTTT+GGG 0.454322 5_4:+19423360 None:intergenic
GCAACAATTGCTCTTCTTGG+TGG 0.456592 5_4:-19425029 Msa0842370:CDS
TTCTTACGACAAATTTGTTA+GGG 0.458736 5_4:-19423343 Msa0842370:CDS
CAGAGTAGAGTGGGTATTGT+GGG 0.463276 5_4:+19425051 None:intergenic
GCTCTTGCAATTGCATCAGC+GGG 0.466274 5_4:+19426667 None:intergenic
TTGTCGTAAGAAATATCTCC+AGG 0.466329 5_4:+19423354 None:intergenic
TCACTAAGGCACTGGCCAGT+AGG 0.479549 5_4:+19424758 None:intergenic
GCAGGCATTTCTTCCTCAGC+TGG 0.482109 5_4:+19421622 None:intergenic
TAATCAGAGGCGAAGGAGAT+GGG 0.482526 5_4:-19425174 Msa0842370:CDS
CACTAAGGCACTGGCCAGTA+GGG 0.482562 5_4:+19424759 None:intergenic
TTGAAACTATCCATAATAGC+AGG 0.483460 5_4:+19421604 None:intergenic
ACCACTGACCTTCCCTCGCC+AGG 0.489247 5_4:-19426923 Msa0842370:intron
CTCTTAAATTCTCTTCACTA+AGG 0.490455 5_4:+19424744 None:intergenic
GGCACAACATATAATAATAC+AGG 0.493819 5_4:+19421400 None:intergenic
TATTATATGTTGTGCCATGA+TGG 0.503878 5_4:-19421393 Msa0842370:three_prime_UTR
TAGAGTGGGTATTGTGGGAC+TGG 0.505840 5_4:+19425056 None:intergenic
ATAAATCCTGGAAACCCTAC+TGG 0.506931 5_4:-19424773 Msa0842370:CDS
GGGAATAGCAGTCCAACGTT+AGG 0.507835 5_4:+19426688 None:intergenic
GTTGTTTGCAATTTCACAGA+AGG 0.509314 5_4:-19422855 Msa0842370:intron
TTTAGTCTTGCTTGGAGATG+AGG 0.510094 5_4:-19424693 Msa0842370:CDS
ATTATTTATTTATGTGGCAG+TGG 0.510548 5_4:+19429109 None:intergenic
TTTGCCCTCCTTCTGAAGCT+CGG 0.511768 5_4:+19427731 None:intergenic
ACGACAAATTTGTTAGGGAG+AGG 0.513028 5_4:-19423338 Msa0842370:intron
TCAGGATTTGGACAGAAAGA+AGG 0.514334 5_4:-19422586 Msa0842370:CDS
TACACTTGTTGTTTCTCACT+CGG 0.515523 5_4:-19429003 Msa0842370:five_prime_UTR
ATGACCACAGAGGTTATTCA+AGG 0.516115 5_4:-19421549 Msa0842370:CDS
CTGATGGATTCAACAGCTGC+AGG 0.516393 5_4:-19422881 Msa0842370:CDS
GGTTTCTGTCCCAAAGCATG+TGG 0.516790 5_4:+19426943 None:intergenic
CAGTATCTCTCATTCACATC+GGG 0.519894 5_4:-19426640 Msa0842370:CDS
AATTCTCTTCACTAAGGCAC+TGG 0.520921 5_4:+19424750 None:intergenic
GCAATGGTGATCATAAATCC+TGG 0.522716 5_4:-19424785 Msa0842370:CDS
GTCAATAGATAACAAGGCAT+TGG 0.525143 5_4:+19429258 None:intergenic
TATTTGAGGGAATGAATACA+TGG 0.526126 5_4:+19422717 None:intergenic
ATGATCAATCCACCCAAACC+TGG 0.527405 5_4:-19423372 Msa0842370:CDS
ACAAAGCCTTATCCACTAAG+TGG 0.538369 5_4:+19421236 None:intergenic
GATTAATGAAAACGTGAAGA+AGG 0.538917 5_4:-19427793 Msa0842370:CDS
TAACTCACAAATATTTGTGC+TGG 0.540144 5_4:+19423501 None:intergenic
AGGCACTCCAGCAGTGAGGA+AGG 0.545081 5_4:-19425430 Msa0842370:CDS
ACAAACCTCTGGAGGAATGT+TGG 0.548308 5_4:+19424415 None:intergenic
TCCAGCAGTGAGGAAGGAAG+TGG 0.549120 5_4:-19425424 Msa0842370:CDS
CTGAGTGAAAAGAAACAAGC+TGG 0.550221 5_4:+19424492 None:intergenic
TCATAGTCTAAGGGCTTTGG+TGG 0.550561 5_4:+19427819 None:intergenic
TCAGTAAGATAGATGAACTC+TGG 0.550763 5_4:+19425235 None:intergenic
ATAATCAGAGGCGAAGGAGA+TGG 0.551065 5_4:-19425175 Msa0842370:CDS
TCTTACTGATGGTGCGAGCA+AGG 0.553432 5_4:-19425221 Msa0842370:CDS
CAATTGTTGCAGAGTAGAGT+GGG 0.553825 5_4:+19425042 None:intergenic
TTAGAGACTGCTAAACAGGC+TGG 0.555028 5_4:-19422676 Msa0842370:CDS
ACTAAGTGGAGTCAGCTACA+TGG 0.558386 5_4:+19421250 None:intergenic
AGAGCAAGGATCATGACTGA+TGG 0.558706 5_4:-19422897 Msa0842370:CDS
GTGCTGAACCTGGCGAGGGA+AGG 0.564545 5_4:+19426915 None:intergenic
GAAATATCTCCAGGTTTGGG+TGG 0.567289 5_4:+19423363 None:intergenic
AGCTCTTGCAATTGCATCAG+CGG 0.568224 5_4:+19426666 None:intergenic
TTAGGATCATCAAGTAGGAA+TGG 0.568415 5_4:+19426706 None:intergenic
GACTTGTAAAACACAGGAGG+AGG 0.569552 5_4:+19421186 None:intergenic
CAACGTTAGGATCATCAAGT+AGG 0.572461 5_4:+19426701 None:intergenic
GCAATTGTTGCAGAGTAGAG+TGG 0.575484 5_4:+19425041 None:intergenic
GAGTTTATACAGAGGCGTGA+TGG 0.576593 5_4:-19425399 Msa0842370:CDS
AGCTACCGAGCTTCAGAAGG+AGG 0.578963 5_4:-19427736 Msa0842370:CDS
GAGTTCATCTATCTTACTGA+TGG 0.582441 5_4:-19425232 Msa0842370:CDS
CTACTTGATGATCCTAACGT+TGG 0.583949 5_4:-19426700 Msa0842370:CDS
TCTTAGGACTTGTAAAACAC+AGG 0.590391 5_4:+19421180 None:intergenic
TGGACTTCCTTGCTTAAAGG+TGG 0.590832 5_4:+19424512 None:intergenic
TATCTCTCATTCACATCGGG+TGG 0.591208 5_4:-19426637 Msa0842370:CDS
TTAATCGACTCATAGTCTAA+GGG 0.594837 5_4:+19427810 None:intergenic
TCGAGCTACCGAGCTTCAGA+AGG 0.594916 5_4:-19427739 Msa0842370:CDS
GTTTCTGTCCCAAAGCATGT+GGG 0.598610 5_4:+19426944 None:intergenic
CAGGATTTGGACAGAAAGAA+GGG 0.599726 5_4:-19422585 Msa0842370:intron
TTGTCAGTGATATATAGAGA+AGG 0.600842 5_4:+19421452 None:intergenic
GCAGAGTAGAGTGGGTATTG+TGG 0.601349 5_4:+19425050 None:intergenic
AATACTATAATCAGAGGCGA+AGG 0.605176 5_4:-19425181 Msa0842370:CDS
GGTATTGTCAATAGATAACA+AGG 0.606528 5_4:+19429252 None:intergenic
TAGTGAAGAGAATTTAAGAG+AGG 0.607939 5_4:-19424741 Msa0842370:CDS
CATCAAGTAGGAATGGAGCC+TGG 0.610744 5_4:+19426713 None:intergenic
ACCTGGCGAGGGAAGGTCAG+TGG 0.613068 5_4:+19426922 None:intergenic
TAGGAATGGAGCCTGGCACA+AGG 0.616418 5_4:+19426720 None:intergenic
AAATCCTGAGCCAGGAACAG+TGG 0.624773 5_4:+19422600 None:intergenic
TCTGAAGCTCGGTAGCTCGA+AGG 0.628218 5_4:+19427742 None:intergenic
AATCACTAAGAAGAAGAGCA+AGG 0.628553 5_4:-19422911 Msa0842370:CDS
GACAACTATATTACCAGCTG+AGG 0.628816 5_4:-19421635 Msa0842370:CDS
GCTACCGAGCTTCAGAAGGA+GGG 0.629811 5_4:-19427735 Msa0842370:CDS
AATCAGAGGCGAAGGAGATG+GGG 0.631418 5_4:-19425173 Msa0842370:intron
ACTTCGAAAATCAGTTAGAG+AGG 0.636186 5_4:-19424949 Msa0842370:CDS
AATGACCAACATTCCTCCAG+AGG 0.636754 5_4:-19424420 Msa0842370:intron
TATGGGGCCACCTTTAAGCA+AGG 0.637447 5_4:-19424519 Msa0842370:CDS
CTCGAAGAGACAGCAAATTG+GGG 0.639287 5_4:-19424987 Msa0842370:CDS
GCAGTATCTCTCATTCACAT+CGG 0.640124 5_4:-19426641 Msa0842370:CDS
ATATTAAATACTATAATCAG+AGG 0.642923 5_4:-19425187 Msa0842370:CDS
TACCCTTTAAGCCTAAAGCT+AGG 0.645737 5_4:-19429233 Msa0842370:five_prime_UTR
ATGAAGAGACAAACCTCTGG+AGG 0.648436 5_4:+19424407 None:intergenic
AGTTGTGCTGAACCTGGCGA+GGG 0.653433 5_4:+19426911 None:intergenic
AAGGCTCAGTATGCTGTCAG+AGG 0.653659 5_4:-19427774 Msa0842370:CDS
TAGGACTTGTAAAACACAGG+AGG 0.661000 5_4:+19421183 None:intergenic
AGGAACAGTGGATATGCCAG+TGG 0.664887 5_4:+19422612 None:intergenic
AGAGGCGTGATGGTTATCCA+AGG 0.667903 5_4:-19425389 Msa0842370:intron
AAGTGGCAGAGTTTATACAG+AGG 0.671960 5_4:-19425407 Msa0842370:CDS
TAGTTGTGCTGAACCTGGCG+AGG 0.681080 5_4:+19426910 None:intergenic
CTCGAGGCACTCCAGCAGTG+AGG 0.699635 5_4:-19425434 Msa0842370:CDS
GGTGAATGTGGACAACGTGG+TGG 0.701411 5_4:-19424452 Msa0842370:CDS
GGTGCTTATAGTGATTCTCG+AGG 0.716171 5_4:-19425450 Msa0842370:CDS
CTCTTGCAATTGCATCAGCG+GGG 0.718034 5_4:+19426668 None:intergenic
TTTGGTGAATGTGGACAACG+TGG 0.726588 5_4:-19424455 Msa0842370:CDS
ACAACCTTGAATAACCTCTG+TGG 0.736073 5_4:+19421545 None:intergenic
GAACAATATGATGACCACAG+AGG 0.786019 5_4:-19421559 Msa0842370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATAATTATTTATTTATG+TGG + chr5_4:19421461-19421480 None:intergenic 10.0%
!!! AATTTTAAAAAAAAATATGG+GGG + chr5_4:19426663-19426682 None:intergenic 10.0%
!!! CAATTTTAAAAAAAAATATG+GGG + chr5_4:19426664-19426683 None:intergenic 10.0%
!!! CCAATTTTAAAAAAAAATAT+GGG + chr5_4:19426665-19426684 None:intergenic 10.0%
!!! CCATATTTTTTTTTAAAATT+GGG - chr5_4:19426663-19426682 Msa0842370:CDS 10.0%
!! TTACAATTAAAATGAAAAAT+AGG + chr5_4:19428434-19428453 None:intergenic 10.0%
!!! TTTTGACTTTTGTTTTAATT+GGG - chr5_4:19421684-19421703 Msa0842370:intron 15.0%
!!! AATAACTTGTTTTCAAATAT+TGG - chr5_4:19423568-19423587 Msa0842370:intron 15.0%
!! TCTAACAATTTAATTAAATG+TGG + chr5_4:19423740-19423759 None:intergenic 15.0%
!!! AAAAAAGTTTCTGAAAAATT+TGG - chr5_4:19424045-19424064 Msa0842370:intron 15.0%
!!! CAATCTATTTTTAAAATGTA+TGG + chr5_4:19424408-19424427 None:intergenic 15.0%
!! ATATTAAATACTATAATCAG+AGG - chr5_4:19425374-19425393 Msa0842370:intron 15.0%
!!! TTATAAATTAAATTTTGACC+AGG - chr5_4:19425748-19425767 Msa0842370:intron 15.0%
!!! CCCATATTTTTTTTTAAAAT+TGG - chr5_4:19426662-19426681 Msa0842370:CDS 15.0%
!!! CCCAATTTTAAAAAAAAATA+TGG + chr5_4:19426666-19426685 None:intergenic 15.0%
!! TTTACTTGTGAAATATATTA+AGG + chr5_4:19428575-19428594 None:intergenic 15.0%
!!! ACATAAATTTATTTTTTGAC+AGG + chr5_4:19429233-19429252 None:intergenic 15.0%
!!! TATGTTTTAGATATGGTATT+TGG + chr5_4:19421195-19421214 None:intergenic 20.0%
!!! TTTAGCTATAAATTTCAAGT+GGG + chr5_4:19421655-19421674 None:intergenic 20.0%
!!! TTTTAGCTATAAATTTCAAG+TGG + chr5_4:19421656-19421675 None:intergenic 20.0%
!!! CTTTTGACTTTTGTTTTAAT+TGG - chr5_4:19421683-19421702 Msa0842370:intron 20.0%
!!! TTTTCCTCTTTGAATTATTT+TGG - chr5_4:19422644-19422663 Msa0842370:CDS 20.0%
!! TATAATACACATTCAATGAA+AGG + chr5_4:19422962-19422981 None:intergenic 20.0%
!! TACAGTATAATTATATGTGT+CGG + chr5_4:19423253-19423272 None:intergenic 20.0%
!!! TTTTAAGCAATCAAATCTTT+GGG + chr5_4:19423432-19423451 None:intergenic 20.0%
!! CAAGTTATTTGAATAGAAAA+TGG + chr5_4:19423557-19423576 None:intergenic 20.0%
!! AATTAGTAAAAGTAGAAGTA+TGG + chr5_4:19423677-19423696 None:intergenic 20.0%
!! TCATATTACGAAAATTACAA+GGG + chr5_4:19423702-19423721 None:intergenic 20.0%
!! ATCATATTACGAAAATTACA+AGG + chr5_4:19423703-19423722 None:intergenic 20.0%
!!! ATTTGTTGATTATTCTATTG+TGG - chr5_4:19423774-19423793 Msa0842370:intron 20.0%
!! CAAATCATTGTTATATAATG+TGG - chr5_4:19423969-19423988 Msa0842370:intron 20.0%
!! AAAAACAAAGGATAATTGAA+TGG + chr5_4:19424196-19424215 None:intergenic 20.0%
!! TTCATGAAACAAGTTTATTT+GGG + chr5_4:19424252-19424271 None:intergenic 20.0%
!!! GTTTATTTTATCTGTGAAAA+TGG + chr5_4:19424366-19424385 None:intergenic 20.0%
!! TCTCTCTATTACAATTAAAA+AGG - chr5_4:19424512-19424531 Msa0842370:CDS 20.0%
!!! ATTTTTACTTTGTATGTGTT+TGG + chr5_4:19424564-19424583 None:intergenic 20.0%
!! ACATACTGTTAGAAATTAAA+CGG - chr5_4:19424587-19424606 Msa0842370:intron 20.0%
!!! AAGTCACATTTTTATTAGAA+TGG - chr5_4:19424707-19424726 Msa0842370:CDS 20.0%
!! ATATAAAATTCAGATGGTAA+TGG + chr5_4:19424966-19424985 None:intergenic 20.0%
!! AGTAAGATATAAAATTCAGA+TGG + chr5_4:19424972-19424991 None:intergenic 20.0%
!! TTGCAAAAACATCTTATAAA+CGG - chr5_4:19425237-19425256 Msa0842370:CDS 20.0%
!! TTAACTTAAATTTCAGTACA+AGG + chr5_4:19426382-19426401 None:intergenic 20.0%
!! TAATACAAGATGTAATCAAT+AGG - chr5_4:19426616-19426635 Msa0842370:intron 20.0%
!!! ATTTAGCAAAATTAGTCTTT+AGG + chr5_4:19427256-19427275 None:intergenic 20.0%
!!! CAAAATCAAAAATTTTCGTT+TGG - chr5_4:19427278-19427297 Msa0842370:intron 20.0%
!! GATAAAAGAAGAAAATAAAG+GGG + chr5_4:19428013-19428032 None:intergenic 20.0%
!! GGATAAAAGAAGAAAATAAA+GGG + chr5_4:19428014-19428033 None:intergenic 20.0%
!! TAAAAAATGGCATAGAAAAA+GGG + chr5_4:19428035-19428054 None:intergenic 20.0%
!!! TTATCTTTTGCTATAGAAAT+AGG - chr5_4:19428286-19428305 Msa0842370:intron 20.0%
!!! TTGGTTGTATGTTTTAGATA+TGG + chr5_4:19421202-19421221 None:intergenic 25.0%
!! GGATTATTGAATTTTTGCAA+GGG + chr5_4:19421379-19421398 None:intergenic 25.0%
!! AGGATTATTGAATTTTTGCA+AGG + chr5_4:19421380-19421399 None:intergenic 25.0%
! ATTATTTATTTATGTGGCAG+TGG + chr5_4:19421455-19421474 None:intergenic 25.0%
! TTCTTCTATCAATCAATCTA+AGG - chr5_4:19421584-19421603 Msa0842370:CDS 25.0%
! ACATCATACAAAACCAAAAA+CGG + chr5_4:19421738-19421757 None:intergenic 25.0%
!! ATGTGTTTTCTTCATGAATT+TGG - chr5_4:19421754-19421773 Msa0842370:intron 25.0%
!!! TAGTCCATAGTTTTAAATTG+CGG - chr5_4:19422394-19422413 Msa0842370:intron 25.0%
! ATTTAACATGTAGTAGTGTA+AGG - chr5_4:19422563-19422582 Msa0842370:intron 25.0%
!! GTATAGTCAAATTTCTTTTC+TGG - chr5_4:19422856-19422875 Msa0842370:CDS 25.0%
!! CTGTATAGCTAATTTTTACA+TGG - chr5_4:19423143-19423162 Msa0842370:intron 25.0%
!! TGATTTTCTCAAATTATCAG+CGG - chr5_4:19423278-19423297 Msa0842370:intron 25.0%
! AAAACTGATATTATGAAGCA+CGG + chr5_4:19423344-19423363 None:intergenic 25.0%
!! CTTTTAAGCAATCAAATCTT+TGG + chr5_4:19423433-19423452 None:intergenic 25.0%
! CAAAGATTTGATTGCTTAAA+AGG - chr5_4:19423431-19423450 Msa0842370:intron 25.0%
! CAGATTATATTCACTAATGT+TGG - chr5_4:19423591-19423610 Msa0842370:intron 25.0%
! CATATTACGAAAATTACAAG+GGG + chr5_4:19423701-19423720 None:intergenic 25.0%
! AAATTATATAGGTCAGCTTT+AGG + chr5_4:19423802-19423821 None:intergenic 25.0%
!!! TGACCTATATAATTTTTTCC+TGG - chr5_4:19423807-19423826 Msa0842370:intron 25.0%
! TGTCCAGGAAAAAATTATAT+AGG + chr5_4:19423813-19423832 None:intergenic 25.0%
!!! TATATAATTTTTTCCTGGAC+AGG - chr5_4:19423812-19423831 Msa0842370:intron 25.0%
! AAAAGTAACAAAACATTGAC+TGG + chr5_4:19424094-19424113 None:intergenic 25.0%
! TACAATCGATTAAAATGCTT+AGG + chr5_4:19424223-19424242 None:intergenic 25.0%
! CTTCATGAAACAAGTTTATT+TGG + chr5_4:19424253-19424272 None:intergenic 25.0%
! TGAAGATGACAAAAGATATT+TGG - chr5_4:19424268-19424287 Msa0842370:intron 25.0%
! GAAGATGACAAAAGATATTT+GGG - chr5_4:19424269-19424288 Msa0842370:intron 25.0%
!! AAAACAAGTCCTTAAGATTT+TGG + chr5_4:19424324-19424343 None:intergenic 25.0%
!! TCACATTTTTATTAGAATGG+TGG - chr5_4:19424710-19424729 Msa0842370:CDS 25.0%
! CTATCACATAGAAATATACA+TGG - chr5_4:19424888-19424907 Msa0842370:intron 25.0%
!!! GTTTATAAGATGTTTTTGCA+AGG + chr5_4:19425238-19425257 None:intergenic 25.0%
!!! AATAATGTCACTTTCTTCAA+AGG + chr5_4:19425726-19425745 None:intergenic 25.0%
! TTACCAGACAAATATATATC+AGG - chr5_4:19425892-19425911 Msa0842370:intron 25.0%
!! GAAAATTAGAGTATTATCTC+AGG + chr5_4:19425998-19426017 None:intergenic 25.0%
!! CTAATTTTCTTTGCACAAAA+AGG - chr5_4:19426009-19426028 Msa0842370:intron 25.0%
!!! AAAAAGGTTTTGATGGATAT+GGG - chr5_4:19426025-19426044 Msa0842370:intron 25.0%
! TTAAATTTCAGTACAAGGTA+GGG + chr5_4:19426377-19426396 None:intergenic 25.0%
!!! ATGTTTAACAAGCTTTATTG+TGG - chr5_4:19426509-19426528 Msa0842370:intron 25.0%
!! TTTCTTACGACAAATTTGTT+AGG - chr5_4:19427217-19427236 Msa0842370:intron 25.0%
!!! TTCTTACGACAAATTTGTTA+GGG - chr5_4:19427218-19427237 Msa0842370:intron 25.0%
! ATTAGAAATCTATGAAACAC+TGG - chr5_4:19427335-19427354 Msa0842370:intron 25.0%
! TGATCTAAGTCATAAAAAGA+AGG - chr5_4:19427567-19427586 Msa0842370:intron 25.0%
! TCTTTAATAATATGCAGCAA+AGG - chr5_4:19427619-19427638 Msa0842370:intron 25.0%
!! CAGAAGGTATAAATAAATGA+CGG - chr5_4:19427722-19427741 Msa0842370:intron 25.0%
! AAAACTCAATGGATCAATAA+TGG + chr5_4:19427815-19427834 None:intergenic 25.0%
! GGGATAAAAGAAGAAAATAA+AGG + chr5_4:19428015-19428034 None:intergenic 25.0%
! CTAAAAAATGGCATAGAAAA+AGG + chr5_4:19428036-19428055 None:intergenic 25.0%
!!! CTTTTTCTATGCCATTTTTT+AGG - chr5_4:19428034-19428053 Msa0842370:intron 25.0%
! TTCTGATTTAGCCTAAAAAA+TGG + chr5_4:19428048-19428067 None:intergenic 25.0%
!!! ATTATTTTTCCACCATTCTA+AGG - chr5_4:19428067-19428086 Msa0842370:intron 25.0%
!!! TTATTTTTCCACCATTCTAA+GGG - chr5_4:19428068-19428087 Msa0842370:intron 25.0%
!!! TATTTTCATATGCTAGCTTA+TGG + chr5_4:19428231-19428250 None:intergenic 25.0%
! ATTAGCACTTATATCATAAG+TGG - chr5_4:19428316-19428335 Msa0842370:intron 25.0%
!! AGATTTACTTGTGAAGTATT+AGG + chr5_4:19428384-19428403 None:intergenic 25.0%
! TACTTCACAAGTAAATCTTT+CGG - chr5_4:19428386-19428405 Msa0842370:intron 25.0%
! ATGAACAACTTTGCAATTAA+AGG - chr5_4:19428508-19428527 Msa0842370:intron 25.0%
!!! AGTTTTACAGTTAAAAGTGT+AGG + chr5_4:19428697-19428716 None:intergenic 25.0%
! AAAGTTCAATGATGATTTCA+TGG - chr5_4:19428980-19428999 Msa0842370:five_prime_UTR 25.0%
! AAAAAACTAAGGTTTAAGGA+GGG + chr5_4:19429087-19429106 None:intergenic 25.0%
! AAAAAAACTAAGGTTTAAGG+AGG + chr5_4:19429088-19429107 None:intergenic 25.0%
! GGAAAAAAAACTAAGGTTTA+AGG + chr5_4:19429091-19429110 None:intergenic 25.0%
! TAGAGAAGGAAAAAAAACTA+AGG + chr5_4:19429098-19429117 None:intergenic 25.0%
!! TGTCTTGTGTTTTACAAATA+TGG - chr5_4:19429257-19429276 Msa0842370:five_prime_UTR 25.0%
!!! TTGATTGTGTTTTGACACAT+TGG + chr5_4:19421269-19421288 None:intergenic 30.0%
GGTATTGTCAATAGATAACA+AGG + chr5_4:19421312-19421331 None:intergenic 30.0%
!! AATGCTTGTGATTGATTTTG+TGG + chr5_4:19421354-19421373 None:intergenic 30.0%
ACTGAAAAAAAGGGTTCAAA+AGG + chr5_4:19421400-19421419 None:intergenic 30.0%
!!! TTTTGAACCCTTTTTTTCAG+TGG - chr5_4:19421399-19421418 Msa0842370:three_prime_UTR 30.0%
ATCATAGCCACTGAAAAAAA+GGG + chr5_4:19421409-19421428 None:intergenic 30.0%
AATCATAGCCACTGAAAAAA+AGG + chr5_4:19421410-19421429 None:intergenic 30.0%
GGTCATTTCATCATGTTATA+TGG + chr5_4:19421634-19421653 None:intergenic 30.0%
!!! ATTGGGTTTGTGTTATTTTG+AGG - chr5_4:19421701-19421720 Msa0842370:intron 30.0%
AATTGCAAAGAAACCGAAAA+AGG + chr5_4:19421813-19421832 None:intergenic 30.0%
! ACTGTAGTAAGTTGAGAAAA+TGG - chr5_4:19421917-19421936 Msa0842370:intron 30.0%
! ACATGCTTTTGCATTTATAC+TGG - chr5_4:19422073-19422092 Msa0842370:intron 30.0%
TTTGTAATTGTACCATCATG+TGG - chr5_4:19422172-19422191 Msa0842370:intron 30.0%
! TTAAAGTACTTAAGAGTCCA+TGG - chr5_4:19422210-19422229 Msa0842370:intron 30.0%
TCATAGATCATAACATACCA+TGG + chr5_4:19422230-19422249 None:intergenic 30.0%
TTAATCCAACGGATAAGATT+TGG + chr5_4:19422279-19422298 None:intergenic 30.0%
CAACTGTTAGATTAATCCAA+CGG + chr5_4:19422290-19422309 None:intergenic 30.0%
!!! CTGCAATATAATGGTTTTAG+AGG - chr5_4:19422424-19422443 Msa0842370:intron 30.0%
AAAAATCAGTAAGATTGCAG+TGG - chr5_4:19422518-19422537 Msa0842370:intron 30.0%
CCAACCAAAATAATTCAAAG+AGG + chr5_4:19422651-19422670 None:intergenic 30.0%
!!! CCTCTTTGAATTATTTTGGT+TGG - chr5_4:19422648-19422667 Msa0842370:CDS 30.0%
! TTAATCGACTCATAGTCTAA+GGG + chr5_4:19422754-19422773 None:intergenic 30.0%
! ATTAATCGACTCATAGTCTA+AGG + chr5_4:19422755-19422774 None:intergenic 30.0%
GATTAATGAAAACGTGAAGA+AGG - chr5_4:19422768-19422787 Msa0842370:intron 30.0%
ATGAAAGGATTTCAATGATC+AGG + chr5_4:19422947-19422966 None:intergenic 30.0%
TGTAACTTGAAGACTGTTAT+TGG - chr5_4:19423001-19423020 Msa0842370:intron 30.0%
! CATAGATTCTCATGCATTTT+TGG - chr5_4:19423032-19423051 Msa0842370:intron 30.0%
!! AGTCTATAACTTGTTCAACA+GGG + chr5_4:19423076-19423095 None:intergenic 30.0%
!! AAGTCTATAACTTGTTCAAC+AGG + chr5_4:19423077-19423096 None:intergenic 30.0%
AATGGTAGTATGTTACACTT+TGG - chr5_4:19423115-19423134 Msa0842370:intron 30.0%
ATGGTAGTATGTTACACTTT+GGG - chr5_4:19423116-19423135 Msa0842370:intron 30.0%
GGAAAAATCTAATCAATGCA+CGG - chr5_4:19423164-19423183 Msa0842370:intron 30.0%
ATACTTATATTCTTGTCGAC+TGG - chr5_4:19423401-19423420 Msa0842370:intron 30.0%
!! TAAAGGTACCTCAAAATGTA+TGG + chr5_4:19424157-19424176 None:intergenic 30.0%
TGCTTAGGAAAGAAAAACAA+AGG + chr5_4:19424208-19424227 None:intergenic 30.0%
!! CCTTAAGATTTTGGTATAGT+TGG + chr5_4:19424315-19424334 None:intergenic 30.0%
CCAACTATACCAAAATCTTA+AGG - chr5_4:19424312-19424331 Msa0842370:intron 30.0%
TGTAATAGAGAGACAATGTA+AGG + chr5_4:19424505-19424524 None:intergenic 30.0%
! TTACTAATTGAACCAGCTTT+TGG + chr5_4:19424789-19424808 None:intergenic 30.0%
AGAATTGGAAAAATGCTACA+GGG + chr5_4:19425007-19425026 None:intergenic 30.0%
AAGAATTGGAAAAATGCTAC+AGG + chr5_4:19425008-19425027 None:intergenic 30.0%
TCTGTTATAACGAGAAGAAT+TGG + chr5_4:19425022-19425041 None:intergenic 30.0%
TGGAGCATAAATAAATACCT+TGG + chr5_4:19425192-19425211 None:intergenic 30.0%
AGTAGAAAAAATTGTGAGTG+TGG + chr5_4:19425212-19425231 None:intergenic 30.0%
ATGTTCAGTTTCCAATTTGT+TGG - chr5_4:19425264-19425283 Msa0842370:intron 30.0%
! TGTTCAGTTTCCAATTTGTT+GGG - chr5_4:19425265-19425284 Msa0842370:intron 30.0%
! GTAATATAGTCTGTTTCTTC+CGG - chr5_4:19425410-19425429 Msa0842370:CDS 30.0%
! AATCTGGCAATAAAAAGTGT+TGG + chr5_4:19425479-19425498 None:intergenic 30.0%
!! CACTTTTTATTGCCAGATTA+TGG - chr5_4:19425480-19425499 Msa0842370:intron 30.0%
CTCTTAAATTCTCTTCACTA+AGG + chr5_4:19425820-19425839 None:intergenic 30.0%
TAGTGAAGAGAATTTAAGAG+AGG - chr5_4:19425820-19425839 Msa0842370:intron 30.0%
!! GAAGAAAATTTAGTCTTGCT+TGG - chr5_4:19425860-19425879 Msa0842370:intron 30.0%
CATCCTGATATATATTTGTC+TGG + chr5_4:19425898-19425917 None:intergenic 30.0%
! TGAAGCAAAACATACCTTTT+TGG + chr5_4:19425939-19425958 None:intergenic 30.0%
!! TTTGCACAAAAAGGTTTTGA+TGG - chr5_4:19426018-19426037 Msa0842370:intron 30.0%
!! CAAAAAGGTTTTGATGGATA+TGG - chr5_4:19426024-19426043 Msa0842370:intron 30.0%
!! AAAAGGTTTTGATGGATATG+GGG - chr5_4:19426026-19426045 Msa0842370:intron 30.0%
CTTAAATTTCAGTACAAGGT+AGG + chr5_4:19426378-19426397 None:intergenic 30.0%
ATGGAGTTCAAATTCCTTTA+GGG + chr5_4:19426741-19426760 None:intergenic 30.0%
AGTTAAACTTTGAACCTCAA+GGG + chr5_4:19426764-19426783 None:intergenic 30.0%
!! CGAACTGAATATTTTTGCTA+TGG - chr5_4:19426836-19426855 Msa0842370:intron 30.0%
AATATTTGTGCTGGAACATT+TGG + chr5_4:19427054-19427073 None:intergenic 30.0%
TAACTCACAAATATTTGTGC+TGG + chr5_4:19427063-19427082 None:intergenic 30.0%
! TAGCACTTATGTTTTTCTGT+CGG - chr5_4:19427081-19427100 Msa0842370:intron 30.0%
TGTAGAACATAGGTAAAAAC+GGG + chr5_4:19427159-19427178 None:intergenic 30.0%
CTGTAGAACATAGGTAAAAA+CGG + chr5_4:19427160-19427179 None:intergenic 30.0%
! TTTTACCTATGTTCTACAGA+TGG - chr5_4:19427161-19427180 Msa0842370:intron 30.0%
TTTACCTATGTTCTACAGAT+GGG - chr5_4:19427162-19427181 Msa0842370:intron 30.0%
TAAGAAATATCTCCAGGTTT+GGG + chr5_4:19427204-19427223 None:intergenic 30.0%
! GTTAACTTCCATTTTCTGTA+GGG - chr5_4:19427300-19427319 Msa0842370:intron 30.0%
TATGACTTAGATCAGACATT+TGG + chr5_4:19427561-19427580 None:intergenic 30.0%
TCATAAAAAGAAGGCTCTTT+AGG - chr5_4:19427576-19427595 Msa0842370:intron 30.0%
TCATGTTACAGCAACATTAT+TGG - chr5_4:19427770-19427789 Msa0842370:CDS 30.0%
TATTTGAGGGAATGAATACA+TGG + chr5_4:19427847-19427866 None:intergenic 30.0%
AATAAGCTGAAATCAGCTAA+TGG + chr5_4:19428185-19428204 None:intergenic 30.0%
! GTGAAGTATTAGGTCATATT+TGG + chr5_4:19428374-19428393 None:intergenic 30.0%
!!! GTACAAGTCTTTTAAAACAG+AGG + chr5_4:19428480-19428499 None:intergenic 30.0%
AAGAAAACCAATAGAACGTA+CGG + chr5_4:19428850-19428869 None:intergenic 30.0%
TTTGTGCTAAACTTTGTGTA+GGG - chr5_4:19428890-19428909 Msa0842370:intron 30.0%
GTAATATAGTTGTCCTCAAA+TGG + chr5_4:19428920-19428939 None:intergenic 30.0%
TTGAAACTATCCATAATAGC+AGG + chr5_4:19428960-19428979 None:intergenic 30.0%
! ATGGGATCAATTGAACTTTT+TGG + chr5_4:19429053-19429072 None:intergenic 30.0%
TTGTCAGTGATATATAGAGA+AGG + chr5_4:19429112-19429131 None:intergenic 30.0%
GGCACAACATATAATAATAC+AGG + chr5_4:19429164-19429183 None:intergenic 30.0%
TATTATATGTTGTGCCATGA+TGG - chr5_4:19429168-19429187 Msa0842370:five_prime_UTR 30.0%
! ATAAGGTTGAAGCTTTTCTT+AGG + chr5_4:19429400-19429419 None:intergenic 30.0%
GTGGTTCATGTTTGTTTGTT+TGG + chr5_4:19421221-19421240 None:intergenic 35.0%
!!! GATGTGTCATTTTCTTTTGG+TGG + chr5_4:19421245-19421264 None:intergenic 35.0%
!!! GGAGATGTGTCATTTTCTTT+TGG + chr5_4:19421248-19421267 None:intergenic 35.0%
GTCAATAGATAACAAGGCAT+TGG + chr5_4:19421306-19421325 None:intergenic 35.0%
!! TACACTTGTTGTTTCTCACT+CGG - chr5_4:19421558-19421577 Msa0842370:CDS 35.0%
!!! GGATTCTTGTTTTCCGTTTT+TGG - chr5_4:19421722-19421741 Msa0842370:intron 35.0%
! TGTTTGTTCACCTCCTTTTT+CGG - chr5_4:19421797-19421816 Msa0842370:intron 35.0%
AACTGTTGAACAACGAACAA+AGG - chr5_4:19421988-19422007 Msa0842370:intron 35.0%
! AAAGGTTCAATCTGAAGTGT+CGG - chr5_4:19422006-19422025 Msa0842370:intron 35.0%
TAAGATTTGGAAAGAGAGGA+TGG + chr5_4:19422266-19422285 None:intergenic 35.0%
TCTTTCCAAATCTTATCCGT+TGG - chr5_4:19422271-19422290 Msa0842370:intron 35.0%
! TCTAACAGTTGAGATTTTGC+TGG - chr5_4:19422299-19422318 Msa0842370:intron 35.0%
! ATTTTGCTGGAGAGACATAA+GGG - chr5_4:19422312-19422331 Msa0842370:intron 35.0%
ACCATGTTGTGTATGATTGT+AGG - chr5_4:19422344-19422363 Msa0842370:intron 35.0%
TCCTACAATCATACACAACA+TGG + chr5_4:19422348-19422367 None:intergenic 35.0%
AAACCATTATATTGCAGCAG+CGG + chr5_4:19422421-19422440 None:intergenic 35.0%
CAGTGTTAGATCTTACTAGA+CGG - chr5_4:19422607-19422626 Msa0842370:CDS 35.0%
ACATACTACCATTACCATGA+TGG + chr5_4:19423108-19423127 None:intergenic 35.0%
GATATTATGAAGCACGGATA+CGG + chr5_4:19423338-19423357 None:intergenic 35.0%
CTTGTTAAATTTCAAGCAGC+TGG + chr5_4:19423378-19423397 None:intergenic 35.0%
TTAGGATCATCAAGTAGGAA+TGG + chr5_4:19423858-19423877 None:intergenic 35.0%
! GACTATGACCATACATTTTG+AGG - chr5_4:19424146-19424165 Msa0842370:intron 35.0%
! TGAGGTACCTTTAATATCTG+CGG - chr5_4:19424164-19424183 Msa0842370:intron 35.0%
GAAAACTCCGCAGATATTAA+AGG + chr5_4:19424174-19424193 None:intergenic 35.0%
TGGAGCATGAGAAAATACAT+AGG - chr5_4:19424664-19424683 Msa0842370:CDS 35.0%
ATGTGACTTTGAACACAATG+TGG + chr5_4:19424696-19424715 None:intergenic 35.0%
! TTATTAGAATGGTGGCGAAA+AGG - chr5_4:19424718-19424737 Msa0842370:CDS 35.0%
AATCCAACTATTCCAAAAGC+TGG - chr5_4:19424774-19424793 Msa0842370:CDS 35.0%
TCTATGTGATAGATTGCAAG+TGG + chr5_4:19424880-19424899 None:intergenic 35.0%
AGCAACGATTGCTATATTGT+AGG - chr5_4:19425090-19425109 Msa0842370:intron 35.0%
!! AGTTTCCAATTTGTTGGGAA+AGG - chr5_4:19425270-19425289 Msa0842370:intron 35.0%
AATCACCTTTCCCAACAAAT+TGG + chr5_4:19425278-19425297 None:intergenic 35.0%
TCAGTAAGATAGATGAACTC+TGG + chr5_4:19425329-19425348 None:intergenic 35.0%
GAGTTCATCTATCTTACTGA+TGG - chr5_4:19425329-19425348 Msa0842370:intron 35.0%
AATACTATAATCAGAGGCGA+AGG - chr5_4:19425380-19425399 Msa0842370:intron 35.0%
! ATGTGACTACAGAAAAGTAC+CGG + chr5_4:19425432-19425451 None:intergenic 35.0%
ACTTCGAAAATCAGTTAGAG+AGG - chr5_4:19425612-19425631 Msa0842370:intron 35.0%
! TTTTGACCAGGTTAAAGCAA+TGG - chr5_4:19425760-19425779 Msa0842370:intron 35.0%
!! ACCTTTTTGGCACTAATGAA+GGG + chr5_4:19425926-19425945 None:intergenic 35.0%
!! TACCTTTTTGGCACTAATGA+AGG + chr5_4:19425927-19425946 None:intergenic 35.0%
!!! AAAGGGTATTTTGGTGAATG+TGG - chr5_4:19426097-19426116 Msa0842370:intron 35.0%
ATTATGAAGAGACAAACCTC+TGG + chr5_4:19426160-19426179 None:intergenic 35.0%
TATTCATAAAGCGTAAGCTG+TGG - chr5_4:19426262-19426281 Msa0842370:intron 35.0%
TAGAAAAATGAGAGCAAGCA+AGG - chr5_4:19426405-19426424 Msa0842370:intron 35.0%
GGATCAAACTCTAGACTATA+CGG - chr5_4:19426426-19426445 Msa0842370:intron 35.0%
AACAGCTTAAACTTGTGAGA+TGG + chr5_4:19426457-19426476 None:intergenic 35.0%
GATGGTTGTAAAACGATCAT+TGG + chr5_4:19426719-19426738 None:intergenic 35.0%
! AGTTCAAATTCCTTTAGGGA+TGG + chr5_4:19426737-19426756 None:intergenic 35.0%
GATGGAGTTCAAATTCCTTT+AGG + chr5_4:19426742-19426761 None:intergenic 35.0%
GAGTTAAACTTTGAACCTCA+AGG + chr5_4:19426765-19426784 None:intergenic 35.0%
GTAGCTACAGCAAAAATTGA+AGG + chr5_4:19426949-19426968 None:intergenic 35.0%
ACAGTCTGCAAAAGAAAATG+AGG + chr5_4:19426994-19427013 None:intergenic 35.0%
ACATAGGTAAAAACGGGAAA+GGG + chr5_4:19427153-19427172 None:intergenic 35.0%
AACATAGGTAAAAACGGGAA+AGG + chr5_4:19427154-19427173 None:intergenic 35.0%
GTAAGAAATATCTCCAGGTT+TGG + chr5_4:19427205-19427224 None:intergenic 35.0%
TTGTCGTAAGAAATATCTCC+AGG + chr5_4:19427210-19427229 None:intergenic 35.0%
! GGTTAACTTCCATTTTCTGT+AGG - chr5_4:19427299-19427318 Msa0842370:intron 35.0%
GAATACAACCCTACAGAAAA+TGG + chr5_4:19427311-19427330 None:intergenic 35.0%
TAACACAATACTCACACATG+TGG + chr5_4:19427441-19427460 None:intergenic 35.0%
CTTCAAATCAAATGTGCATC+TGG + chr5_4:19427491-19427510 None:intergenic 35.0%
AATCACTAAGAAGAAGAGCA+AGG - chr5_4:19427650-19427669 Msa0842370:intron 35.0%
GTTGTTTGCAATTTCACAGA+AGG - chr5_4:19427706-19427725 Msa0842370:intron 35.0%
TGCTGTAACATGAGAATACA+TGG + chr5_4:19427763-19427782 None:intergenic 35.0%
! GCAACATTATTGGACTGTTT+TGG - chr5_4:19427780-19427799 Msa0842370:CDS 35.0%
TGGATCAATAATGGTTTACC+AGG + chr5_4:19427806-19427825 None:intergenic 35.0%
!!! TGATCCATTGAGTTTTGTTC+AGG - chr5_4:19427819-19427838 Msa0842370:CDS 35.0%
!!! TTGGTGGCAGTTTTATTTGA+GGG + chr5_4:19427860-19427879 None:intergenic 35.0%
!!! TTTGGTGGCAGTTTTATTTG+AGG + chr5_4:19427861-19427880 None:intergenic 35.0%
!!! TTAGCAGTCTCTAAAGCTTT+TGG + chr5_4:19427879-19427898 None:intergenic 35.0%
! TTACTACTGTCTCAAGCTTT+TGG - chr5_4:19427923-19427942 Msa0842370:intron 35.0%
!! CTTATTTTCATAAGCTCTCC+AGG - chr5_4:19428199-19428218 Msa0842370:intron 35.0%
!!! AGTCTTTTAAAACAGAGGCA+AGG + chr5_4:19428475-19428494 None:intergenic 35.0%
! AAGGCTTCAGAAGACATTTT+CGG + chr5_4:19428556-19428575 None:intergenic 35.0%
!! AGCAAAGATCGTTTTTCGAA+AGG + chr5_4:19428598-19428617 None:intergenic 35.0%
CTTTGTGCTAAACTTTGTGT+AGG - chr5_4:19428889-19428908 Msa0842370:intron 35.0%
!!! AGGAGGGTATGTTTTTTGAT+GGG + chr5_4:19429071-19429090 None:intergenic 35.0%
!!! AAGGAGGGTATGTTTTTTGA+TGG + chr5_4:19429072-19429091 None:intergenic 35.0%
AAGATGATTGTTTGCCATCA+TGG + chr5_4:19429185-19429204 None:intergenic 35.0%
TCTTAGGACTTGTAAAACAC+AGG + chr5_4:19429384-19429403 None:intergenic 35.0%
!! GTCATTTTCTTTTGGTGGAG+TGG + chr5_4:19421240-19421259 None:intergenic 40.0%
TACCCTTTAAGCCTAAAGCT+AGG - chr5_4:19421328-19421347 Msa0842370:three_prime_UTR 40.0%
!! TGATTTTGTGGCCTAGCTTT+AGG + chr5_4:19421342-19421361 None:intergenic 40.0%
TGCAAAGAAACCGAAAAAGG+AGG + chr5_4:19421810-19421829 None:intergenic 40.0%
ATAGACACAACATCGATACG+TGG - chr5_4:19421894-19421913 Msa0842370:intron 40.0%
GTTCAACAGTTATCAGACAC+CGG + chr5_4:19421979-19421998 None:intergenic 40.0%
!!! CTGTGCATAGGTTTTGAGTT+GGG - chr5_4:19422029-19422048 Msa0842370:intron 40.0%
!!! TGTGCATAGGTTTTGAGTTG+GGG - chr5_4:19422030-19422049 Msa0842370:intron 40.0%
ACACAGCATATTCCACATGA+TGG + chr5_4:19422187-19422206 None:intergenic 40.0%
CGGATAAGATTTGGAAAGAG+AGG + chr5_4:19422270-19422289 None:intergenic 40.0%
! GATTTTGCTGGAGAGACATA+AGG - chr5_4:19422311-19422330 Msa0842370:intron 40.0%
! CGGACCGCAATTTAAAACTA+TGG + chr5_4:19422401-19422420 None:intergenic 40.0%
!! ATCTGCTTGACTTGCACTTA+TGG - chr5_4:19422898-19422917 Msa0842370:CDS 40.0%
!! TCTGCTTGACTTGCACTTAT+GGG - chr5_4:19422899-19422918 Msa0842370:CDS 40.0%
AGACTTTAGCATTGCCATCA+TGG - chr5_4:19423091-19423110 Msa0842370:intron 40.0%
TAGCATTGCCATCATGGTAA+TGG - chr5_4:19423097-19423116 Msa0842370:intron 40.0%
TCTCAAATTATCAGCGGTGT+CGG - chr5_4:19423284-19423303 Msa0842370:intron 40.0%
CAACGTTAGGATCATCAAGT+AGG + chr5_4:19423863-19423882 None:intergenic 40.0%
! CTACTTGATGATCCTAACGT+TGG - chr5_4:19423861-19423880 Msa0842370:intron 40.0%
GCAGTATCTCTCATTCACAT+CGG - chr5_4:19423920-19423939 Msa0842370:intron 40.0%
CAGTATCTCTCATTCACATC+GGG - chr5_4:19423921-19423940 Msa0842370:intron 40.0%
GTGTTTGGCTAGTAGACATT+TGG + chr5_4:19424549-19424568 None:intergenic 40.0%
GTTCCTAAGTTGTTAGCTGA+TGG - chr5_4:19424609-19424628 Msa0842370:intron 40.0%
GATCCATCAGCTAACAACTT+AGG + chr5_4:19424615-19424634 None:intergenic 40.0%
!! GTTGACGTTTTGGTCATAGA+GGG - chr5_4:19424740-19424759 Msa0842370:CDS 40.0%
!!! GAACCAGCTTTTGGAATAGT+TGG + chr5_4:19424780-19424799 None:intergenic 40.0%
CAAGCTAGAACAATCTTGCT+AGG + chr5_4:19424930-19424949 None:intergenic 40.0%
AAGTGGCAGAGTTTATACAG+AGG - chr5_4:19425154-19425173 Msa0842370:intron 40.0%
CTCTGGATCACTACAAATAG+AGG + chr5_4:19425312-19425331 None:intergenic 40.0%
CAATTGTTGCAGAGTAGAGT+GGG + chr5_4:19425522-19425541 None:intergenic 40.0%
TCTGCAACAATTGCTCTTCT+TGG - chr5_4:19425529-19425548 Msa0842370:intron 40.0%
TGATCACCATTGCTTTAACC+TGG + chr5_4:19425769-19425788 None:intergenic 40.0%
GCAATGGTGATCATAAATCC+TGG - chr5_4:19425776-19425795 Msa0842370:intron 40.0%
ATAAATCCTGGAAACCCTAC+TGG - chr5_4:19425788-19425807 Msa0842370:intron 40.0%
AATTCTCTTCACTAAGGCAC+TGG + chr5_4:19425814-19425833 None:intergenic 40.0%
!! TTTAGTCTTGCTTGGAGATG+AGG - chr5_4:19425868-19425887 Msa0842370:intron 40.0%
ACCCTTCATTAGTGCCAAAA+AGG - chr5_4:19425922-19425941 Msa0842370:intron 40.0%
CTGAGTGAAAAGAAACAAGC+TGG + chr5_4:19426072-19426091 None:intergenic 40.0%
!! TCTTTTCACTCAGTGTCGAA+AGG - chr5_4:19426079-19426098 Msa0842370:intron 40.0%
!! CTTTTCACTCAGTGTCGAAA+GGG - chr5_4:19426080-19426099 Msa0842370:intron 40.0%
!!! TCAGTGTCGAAAGGGTATTT+TGG - chr5_4:19426088-19426107 Msa0842370:intron 40.0%
TTTCTTGCTGAGTGTTAAGC+TGG - chr5_4:19426194-19426213 Msa0842370:intron 40.0%
AATTTCAGTACAAGGTAGGG+TGG + chr5_4:19426374-19426393 None:intergenic 40.0%
! CGTTTTACAACCATCCCTAA+AGG - chr5_4:19426724-19426743 Msa0842370:CDS 40.0%
AATTTGAACTCCATCCCTTG+AGG - chr5_4:19426747-19426766 Msa0842370:intron 40.0%
AAACTTTGAACCTCAAGGGA+TGG + chr5_4:19426760-19426779 None:intergenic 40.0%
TGCCTGTTGTCTAGACATAT+AGG - chr5_4:19426881-19426900 Msa0842370:intron 40.0%
GTCCTATATGTCTAGACAAC+AGG + chr5_4:19426886-19426905 None:intergenic 40.0%
CACTTGCATGTTAAGTCAGA+TGG + chr5_4:19426908-19426927 None:intergenic 40.0%
TAGTCCCATCTGTAGAACAT+AGG + chr5_4:19427169-19427188 None:intergenic 40.0%
!! ACGACAAATTTGTTAGGGAG+AGG - chr5_4:19427223-19427242 Msa0842370:intron 40.0%
!!! ATTATTGGACTGTTTTGGCC+TGG - chr5_4:19427785-19427804 Msa0842370:CDS 40.0%
!! AGCTTTAGAGACTGCTAAAC+AGG - chr5_4:19427881-19427900 Msa0842370:intron 40.0%
TCAGGATTTGGACAGAAAGA+AGG - chr5_4:19427975-19427994 Msa0842370:intron 40.0%
CAGGATTTGGACAGAAAGAA+GGG - chr5_4:19427976-19427995 Msa0842370:intron 40.0%
ATCCAAACAGACCCTTAGAA+TGG + chr5_4:19428082-19428101 None:intergenic 40.0%
AATAGAACGTACGGTCTGAT+TGG + chr5_4:19428841-19428860 None:intergenic 40.0%
AATCAGACCGTACGTTCTAT+TGG - chr5_4:19428840-19428859 Msa0842370:intron 40.0%
! TGTGTAGGGTTTTCCATTTG+AGG - chr5_4:19428904-19428923 Msa0842370:intron 40.0%
GACAACTATATTACCAGCTG+AGG - chr5_4:19428926-19428945 Msa0842370:intron 40.0%
GGAAGAAATGCCTGCTATTA+TGG - chr5_4:19428947-19428966 Msa0842370:intron 40.0%
GAACAATATGATGACCACAG+AGG - chr5_4:19429002-19429021 Msa0842370:five_prime_UTR 40.0%
ATGACCACAGAGGTTATTCA+AGG - chr5_4:19429012-19429031 Msa0842370:five_prime_UTR 40.0%
ACAACCTTGAATAACCTCTG+TGG + chr5_4:19429019-19429038 None:intergenic 40.0%
! ACAAAGCCTTATCCACTAAG+TGG + chr5_4:19429328-19429347 None:intergenic 40.0%
TAGGACTTGTAAAACACAGG+AGG + chr5_4:19429381-19429400 None:intergenic 40.0%
!! GGCCTAGCTTTAGGCTTAAA+GGG + chr5_4:19421333-19421352 None:intergenic 45.0%
!! TGGCCTAGCTTTAGGCTTAA+AGG + chr5_4:19421334-19421353 None:intergenic 45.0%
!!! GCTGTGCATAGGTTTTGAGT+TGG - chr5_4:19422028-19422047 Msa0842370:intron 45.0%
!!! GTGCATAGGTTTTGAGTTGG+GGG - chr5_4:19422031-19422050 Msa0842370:intron 45.0%
! TCATAGTCTAAGGGCTTTGG+TGG + chr5_4:19422745-19422764 None:intergenic 45.0%
GACTCATAGTCTAAGGGCTT+TGG + chr5_4:19422748-19422767 None:intergenic 45.0%
!! CTTGACTTGCACTTATGGGT+TGG - chr5_4:19422903-19422922 Msa0842370:CDS 45.0%
!! TGCACTTATGGGTTGGTTGA+AGG - chr5_4:19422910-19422929 Msa0842370:CDS 45.0%
ATCAATGCACGGACACTTCT+CGG - chr5_4:19423175-19423194 Msa0842370:intron 45.0%
TTTCAAGCAGCTGGAGAGTA+TGG + chr5_4:19423369-19423388 None:intergenic 45.0%
TGTTGGAAACCCACATGCTT+TGG - chr5_4:19423608-19423627 Msa0842370:intron 45.0%
GTTGGAAACCCACATGCTTT+GGG - chr5_4:19423609-19423628 Msa0842370:intron 45.0%
GTTTCTGTCCCAAAGCATGT+GGG + chr5_4:19423620-19423639 None:intergenic 45.0%
TATGGTAGTTGTGCTGAACC+TGG + chr5_4:19423659-19423678 None:intergenic 45.0%
AGCTCTTGCAATTGCATCAG+CGG + chr5_4:19423898-19423917 None:intergenic 45.0%
TATCTCTCATTCACATCGGG+TGG - chr5_4:19423924-19423943 Msa0842370:intron 45.0%
TCATTCACATCGGGTGGTTT+AGG - chr5_4:19423930-19423949 Msa0842370:intron 45.0%
GGCTAGTAGACATTTGGTCA+TGG + chr5_4:19424543-19424562 None:intergenic 45.0%
AGTGGTTCATAAGTGCCCTA+AGG - chr5_4:19424638-19424657 Msa0842370:intron 45.0%
TCATAAGTGCCCTAAGGCTT+TGG - chr5_4:19424644-19424663 Msa0842370:CDS 45.0%
TCTCATGCTCCAAAGCCTTA+GGG + chr5_4:19424656-19424675 None:intergenic 45.0%
TTCTCATGCTCCAAAGCCTT+AGG + chr5_4:19424657-19424676 None:intergenic 45.0%
! TGGCGAAAAGGTTGACGTTT+TGG - chr5_4:19424730-19424749 Msa0842370:CDS 45.0%
!! GGTTGACGTTTTGGTCATAG+AGG - chr5_4:19424739-19424758 Msa0842370:CDS 45.0%
GGTGCTTATAGTGATTCTCG+AGG - chr5_4:19425111-19425130 Msa0842370:intron 45.0%
! GAGTTTATACAGAGGCGTGA+TGG - chr5_4:19425162-19425181 Msa0842370:intron 45.0%
ATAATCAGAGGCGAAGGAGA+TGG - chr5_4:19425386-19425405 Msa0842370:intron 45.0%
TAATCAGAGGCGAAGGAGAT+GGG - chr5_4:19425387-19425406 Msa0842370:intron 45.0%
! CAGAGTAGAGTGGGTATTGT+GGG + chr5_4:19425513-19425532 None:intergenic 45.0%
GCAATTGTTGCAGAGTAGAG+TGG + chr5_4:19425523-19425542 None:intergenic 45.0%
GCAACAATTGCTCTTCTTGG+TGG - chr5_4:19425532-19425551 Msa0842370:intron 45.0%
ACCTCGAAGAGACAGCAAAT+TGG - chr5_4:19425572-19425591 Msa0842370:intron 45.0%
CCTCGAAGAGACAGCAAATT+GGG - chr5_4:19425573-19425592 Msa0842370:intron 45.0%
CTCGAAGAGACAGCAAATTG+GGG - chr5_4:19425574-19425593 Msa0842370:intron 45.0%
GTTAGAGAGGCTCGCTATAA+AGG - chr5_4:19425625-19425644 Msa0842370:intron 45.0%
TGGACTTCCTTGCTTAAAGG+TGG + chr5_4:19426052-19426071 None:intergenic 45.0%
AGCTGGACTTCCTTGCTTAA+AGG + chr5_4:19426055-19426074 None:intergenic 45.0%
TTTGGTGAATGTGGACAACG+TGG - chr5_4:19426106-19426125 Msa0842370:intron 45.0%
TCCACGTTTCAAGCTCTGTA+GGG + chr5_4:19426339-19426358 None:intergenic 45.0%
ATCCACGTTTCAAGCTCTGT+AGG + chr5_4:19426340-19426359 None:intergenic 45.0%
CCATTGAGAAGCTCAAGTCA+CGG - chr5_4:19426556-19426575 Msa0842370:intron 45.0%
TTCATGATGTCTCAGCTCAG+TGG + chr5_4:19426791-19426810 None:intergenic 45.0%
AGGGTGAGGAAAAGGAGATA+GGG + chr5_4:19427134-19427153 None:intergenic 45.0%
AAGGGTGAGGAAAAGGAGAT+AGG + chr5_4:19427135-19427154 None:intergenic 45.0%
ATGATCAATCCACCCAAACC+TGG - chr5_4:19427189-19427208 Msa0842370:intron 45.0%
GAAATATCTCCAGGTTTGGG+TGG + chr5_4:19427201-19427220 None:intergenic 45.0%
AGTTAAACATGTGCCCGTGT+CGG + chr5_4:19427381-19427400 None:intergenic 45.0%
TAGTGTCCGATACTGACACA+TGG - chr5_4:19427459-19427478 Msa0842370:intron 45.0%
TGTCTGCCATGTGTCAGTAT+CGG + chr5_4:19427468-19427487 None:intergenic 45.0%
AGAGCAAGGATCATGACTGA+TGG - chr5_4:19427664-19427683 Msa0842370:intron 45.0%
GGCACCTGAACAAAACTCAA+TGG + chr5_4:19427826-19427845 None:intergenic 45.0%
!!! GCAGTCTCTAAAGCTTTTGG+TGG + chr5_4:19427876-19427895 None:intergenic 45.0%
TTAGAGACTGCTAAACAGGC+TGG - chr5_4:19427885-19427904 Msa0842370:intron 45.0%
CAAACAGACCCTTAGAATGG+TGG + chr5_4:19428079-19428098 None:intergenic 45.0%
! CACCATTCTAAGGGTCTGTT+TGG - chr5_4:19428077-19428096 Msa0842370:intron 45.0%
ACTAAGTGGAGTCAGCTACA+TGG + chr5_4:19429314-19429333 None:intergenic 45.0%
! ATGTAGCTGACTCCACTTAG+TGG - chr5_4:19429313-19429332 Msa0842370:five_prime_UTR 45.0%
! CTGACTCCACTTAGTGGATA+AGG - chr5_4:19429319-19429338 Msa0842370:five_prime_UTR 45.0%
GACTTGTAAAACACAGGAGG+AGG + chr5_4:19429378-19429397 None:intergenic 45.0%
!!! AAATATTTTAAATTAACTTA+GGG + chr5_4:19422547-19422566 None:intergenic 5.0%
!!! TAAATATTTTAAATTAACTT+AGG + chr5_4:19422548-19422567 None:intergenic 5.0%
AACAGTTATCAGACACCGGC+AGG + chr5_4:19421975-19421994 None:intergenic 50.0%
GGTCCGCTGCTGCAATATAA+TGG - chr5_4:19422415-19422434 Msa0842370:intron 50.0%
AAGGCTCAGTATGCTGTCAG+AGG - chr5_4:19422787-19422806 Msa0842370:intron 50.0%
!! TTTGCCCTCCTTCTGAAGCT+CGG + chr5_4:19422833-19422852 None:intergenic 50.0%
GCTTCAGAAGGAGGGCAAAA+AGG - chr5_4:19422834-19422853 Msa0842370:intron 50.0%
ATACGGACACGGACACGATA+CGG + chr5_4:19423321-19423340 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG + chr5_4:19423332-19423351 None:intergenic 50.0%
GGTTTCTGTCCCAAAGCATG+TGG + chr5_4:19423621-19423640 None:intergenic 50.0%
CATCAAGTAGGAATGGAGCC+TGG + chr5_4:19423851-19423870 None:intergenic 50.0%
GGGAATAGCAGTCCAACGTT+AGG + chr5_4:19423876-19423895 None:intergenic 50.0%
CTCTTGCAATTGCATCAGCG+GGG + chr5_4:19423896-19423915 None:intergenic 50.0%
GCTCTTGCAATTGCATCAGC+GGG + chr5_4:19423897-19423916 None:intergenic 50.0%
! GTTAGCTGATGGATCGTGAG+TGG - chr5_4:19424620-19424639 Msa0842370:intron 50.0%
! AGAGGCGTGATGGTTATCCA+AGG - chr5_4:19425172-19425191 Msa0842370:intron 50.0%
! TCTTACTGATGGTGCGAGCA+AGG - chr5_4:19425340-19425359 Msa0842370:intron 50.0%
AATCAGAGGCGAAGGAGATG+GGG - chr5_4:19425388-19425407 Msa0842370:intron 50.0%
GTGGGACTGGAACCATAATC+TGG + chr5_4:19425495-19425514 None:intergenic 50.0%
! TAGAGTGGGTATTGTGGGAC+TGG + chr5_4:19425508-19425527 None:intergenic 50.0%
! GCAGAGTAGAGTGGGTATTG+TGG + chr5_4:19425514-19425533 None:intergenic 50.0%
GCTGTCTCTTCGAGGTAGTA+TGG + chr5_4:19425568-19425587 None:intergenic 50.0%
!! CCCAATTTGCTGTCTCTTCG+AGG + chr5_4:19425576-19425595 None:intergenic 50.0%
TATGGGGCCACCTTTAAGCA+AGG - chr5_4:19426042-19426061 Msa0842370:intron 50.0%
TCCCTACAGAGCTTGAAACG+TGG - chr5_4:19426335-19426354 Msa0842370:intron 50.0%
CCGTGACTTGAGCTTCTCAA+TGG + chr5_4:19426559-19426578 None:intergenic 50.0%
AACGGGAAAGGGTGAGGAAA+AGG + chr5_4:19427142-19427161 None:intergenic 50.0%
GGTAAAAACGGGAAAGGGTG+AGG + chr5_4:19427148-19427167 None:intergenic 50.0%
CTCCGAACACAATACCGACA+CGG - chr5_4:19427364-19427383 Msa0842370:intron 50.0%
TCCGAACACAATACCGACAC+GGG - chr5_4:19427365-19427384 Msa0842370:intron 50.0%
!! CTGATGGATTCAACAGCTGC+AGG - chr5_4:19427680-19427699 Msa0842370:intron 50.0%
!! CTCAAGCTTTTGGAAGCCAC+TGG - chr5_4:19427933-19427952 Msa0842370:intron 50.0%
AGGAACAGTGGATATGCCAG+TGG + chr5_4:19427952-19427971 None:intergenic 50.0%
ACTGGCATATCCACTGTTCC+TGG - chr5_4:19427951-19427970 Msa0842370:intron 50.0%
ATATCCACTGTTCCTGGCTC+AGG - chr5_4:19427957-19427976 Msa0842370:intron 50.0%
AAATCCTGAGCCAGGAACAG+TGG + chr5_4:19427964-19427983 None:intergenic 50.0%
ACTGTTCCTGGCTCAGGATT+TGG - chr5_4:19427963-19427982 Msa0842370:intron 50.0%
TTCTGTCCAAATCCTGAGCC+AGG + chr5_4:19427972-19427991 None:intergenic 50.0%
! GCTAGCTTATGGAACTCTCC+TGG + chr5_4:19428220-19428239 None:intergenic 50.0%
!! CTGAAGTGTCGGCTGTGCAT+AGG - chr5_4:19422017-19422036 Msa0842370:intron 55.0%
! TGGGGGAGCACATATTCGTG+TGG - chr5_4:19422048-19422067 Msa0842370:intron 55.0%
! TCTGAAGCTCGGTAGCTCGA+AGG + chr5_4:19422822-19422841 None:intergenic 55.0%
TCGAGCTACCGAGCTTCAGA+AGG - chr5_4:19422822-19422841 Msa0842370:intron 55.0%
AGCTACCGAGCTTCAGAAGG+AGG - chr5_4:19422825-19422844 Msa0842370:intron 55.0%
GCTACCGAGCTTCAGAAGGA+GGG - chr5_4:19422826-19422845 Msa0842370:intron 55.0%
GCACGGACACTTCTCGGATT+AGG - chr5_4:19423181-19423200 Msa0842370:intron 55.0%
GATTAGGTGTGTCCCCGTGT+CGG - chr5_4:19423197-19423216 Msa0842370:intron 55.0%
ATTAGGTGTGTCCCCGTGTC+GGG - chr5_4:19423198-19423217 Msa0842370:intron 55.0%
AGTTGTGCTGAACCTGGCGA+GGG + chr5_4:19423653-19423672 None:intergenic 55.0%
TAGTTGTGCTGAACCTGGCG+AGG + chr5_4:19423654-19423673 None:intergenic 55.0%
CACAAGGCAACAACCTGTCC+AGG + chr5_4:19423828-19423847 None:intergenic 55.0%
ACAGGTTGTTGCCTTGTGCC+AGG - chr5_4:19423830-19423849 Msa0842370:intron 55.0%
TAGGAATGGAGCCTGGCACA+AGG + chr5_4:19423844-19423863 None:intergenic 55.0%
TCCAGCAGTGAGGAAGGAAG+TGG - chr5_4:19425137-19425156 Msa0842370:intron 55.0%
!! CACTAAGGCACTGGCCAGTA+GGG + chr5_4:19425805-19425824 None:intergenic 55.0%
!! TCACTAAGGCACTGGCCAGT+AGG + chr5_4:19425806-19425825 None:intergenic 55.0%
GGTGAATGTGGACAACGTGG+TGG - chr5_4:19426109-19426128 Msa0842370:intron 55.0%
GCTCAAGTCACGGCATGAAG+TGG - chr5_4:19426566-19426585 Msa0842370:intron 55.0%
! GCCCGTGTCGGTATTGTGTT+CGG + chr5_4:19427369-19427388 None:intergenic 55.0%
GCAGGCATTTCTTCCTCAGC+TGG + chr5_4:19428942-19428961 None:intergenic 55.0%
CACGTGTGTCAGTGTCCTGC+CGG - chr5_4:19421957-19421976 Msa0842370:intron 60.0%
CACGACAATTGCCCGACACG+GGG + chr5_4:19423212-19423231 None:intergenic 60.0%
GCACGACAATTGCCCGACAC+GGG + chr5_4:19423213-19423232 None:intergenic 60.0%
GGCACGACAATTGCCCGACA+CGG + chr5_4:19423214-19423233 None:intergenic 60.0%
AGGCACTCCAGCAGTGAGGA+AGG - chr5_4:19425131-19425150 Msa0842370:intron 60.0%
GCCACTTCCTTCCTCACTGC+TGG + chr5_4:19425141-19425160 None:intergenic 60.0%
CACTGGCCAGTAGGGTTTCC+AGG + chr5_4:19425797-19425816 None:intergenic 60.0%
GTCGGCGTCGTGTCAGTGTC+AGG + chr5_4:19423235-19423254 None:intergenic 65.0%
ACCACTGACCTTCCCTCGCC+AGG - chr5_4:19423638-19423657 Msa0842370:intron 65.0%
ACCTGGCGAGGGAAGGTCAG+TGG + chr5_4:19423642-19423661 None:intergenic 65.0%
GTGCTGAACCTGGCGAGGGA+AGG + chr5_4:19423649-19423668 None:intergenic 65.0%
! CTCGAGGCACTCCAGCAGTG+AGG - chr5_4:19425127-19425146 Msa0842370:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 19421157 19429426 19421157 ID=Msa0842370;Name=Msa0842370
chr5_4 mRNA 19421157 19429426 19421157 ID=Msa0842370-mRNA-1;Parent=Msa0842370;Name=Msa0842370-mRNA-1;_AED=0.09;_eAED=0.09;_QI=479|1|1|1|0.85|0.73|15|366|481
chr5_4 exon 19421157 19421221 19421157 ID=Msa0842370-mRNA-1:exon:8113;Parent=Msa0842370-mRNA-1
chr5_4 exon 19421242 19421672 19421242 ID=Msa0842370-mRNA-1:exon:8112;Parent=Msa0842370-mRNA-1
chr5_4 exon 19422586 19422742 19422586 ID=Msa0842370-mRNA-1:exon:8111;Parent=Msa0842370-mRNA-1
chr5_4 exon 19422856 19422947 19422856 ID=Msa0842370-mRNA-1:exon:8110;Parent=Msa0842370-mRNA-1
chr5_4 exon 19423339 19423403 19423339 ID=Msa0842370-mRNA-1:exon:8109;Parent=Msa0842370-mRNA-1
chr5_4 exon 19423509 19423574 19423509 ID=Msa0842370-mRNA-1:exon:8108;Parent=Msa0842370-mRNA-1
chr5_4 exon 19424421 19424552 19424421 ID=Msa0842370-mRNA-1:exon:8107;Parent=Msa0842370-mRNA-1
chr5_4 exon 19424640 19424813 19424640 ID=Msa0842370-mRNA-1:exon:8106;Parent=Msa0842370-mRNA-1
chr5_4 exon 19424929 19425087 19424929 ID=Msa0842370-mRNA-1:exon:8105;Parent=Msa0842370-mRNA-1
chr5_4 exon 19425174 19425261 19425174 ID=Msa0842370-mRNA-1:exon:8104;Parent=Msa0842370-mRNA-1
chr5_4 exon 19425390 19425471 19425390 ID=Msa0842370-mRNA-1:exon:8103;Parent=Msa0842370-mRNA-1
chr5_4 exon 19426632 19426749 19426632 ID=Msa0842370-mRNA-1:exon:8102;Parent=Msa0842370-mRNA-1
chr5_4 exon 19426924 19426989 19426924 ID=Msa0842370-mRNA-1:exon:8101;Parent=Msa0842370-mRNA-1
chr5_4 exon 19427728 19427874 19427728 ID=Msa0842370-mRNA-1:exon:8100;Parent=Msa0842370-mRNA-1
chr5_4 exon 19428978 19429426 19428978 ID=Msa0842370-mRNA-1:exon:8099;Parent=Msa0842370-mRNA-1
chr5_4 five_prime_UTR 19428978 19429426 19428978 ID=Msa0842370-mRNA-1:five_prime_utr;Parent=Msa0842370-mRNA-1
chr5_4 five_prime_UTR 19427845 19427874 19427845 ID=Msa0842370-mRNA-1:five_prime_utr;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19427728 19427844 19427728 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19426924 19426989 19426924 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19426632 19426749 19426632 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19425390 19425471 19425390 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19425174 19425261 19425174 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19424929 19425087 19424929 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19424640 19424813 19424640 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19424421 19424552 19424421 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19423509 19423574 19423509 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19423339 19423403 19423339 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19422856 19422947 19422856 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19422586 19422742 19422586 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 CDS 19421543 19421672 19421543 ID=Msa0842370-mRNA-1:cds;Parent=Msa0842370-mRNA-1
chr5_4 three_prime_UTR 19421242 19421542 19421242 ID=Msa0842370-mRNA-1:three_prime_utr;Parent=Msa0842370-mRNA-1
chr5_4 three_prime_UTR 19421157 19421221 19421157 ID=Msa0842370-mRNA-1:three_prime_utr;Parent=Msa0842370-mRNA-1
Gene Sequence

>Msa0842370

ATGCCACCAAAGCCCTTAGACTATGAGTCGATTAATGAAAACGTGAAGAAGGCTCAGTATGCTGTCAGAGGTGAATTGTACCTTCGAGCTACCGAGCTTCAGAAGGAGGGCAAAAAGATTATATTCACTAATGTTGGAAACCCACATGCTTTGGGACAGAAACCACTGACCTTCCCTCGCCAGGTTGTTGCCTTGTGCCAGGCTCCATTCCTACTTGATGATCCTAACGTTGGACTGCTATTCCCCGCTGATGCAATTGCAAGAGCTAAGCAGTATCTCTCATTCACATCGGGTGGTTTAGGTGCTTATAGTGATTCTCGAGGCACTCCAGCAGTGAGGAAGGAAGTGGCAGAGTTTATACAGAGGCGTGATGGTTATCCAAGTGATCCAGAGTTCATCTATCTTACTGATGGTGCGAGCAAGGCTGTGATGCAGATATTAAATACTATAATCAGAGGCGAAGGAGATGGGATTATGGTTCCAGTCCCACAATACCCACTCTACTCTGCAACAATTGCTCTTCTTGGTGGTACTCTTGTTCCATACTACCTCGAAGAGACAGCAAATTGGGGTCTTGATACTAATGAACTTCGAAAATCAGTTAGAGAGGCTCGCTATAAAGGATTAAATGTTAAAGCAATGGTGATCATAAATCCTGGAAACCCTACTGGCCAGTGCCTTAGTGAAGAGAATTTAAGAGAGGTTTTGCAATTTTGTTATGAAGAAAATTTAGTCTTGCTTGGAGATGAGGTTTACCAGACAAATATATATCAGGATGAGCGACCCTTCATTAGTGCCAAAAAGGTTTTGATGGATATGGGGCCACCTTTAAGCAAGGAAGTCCAGCTTGTTTCTTTTCACTCAGTGTCGAAAGGGTATTTTGGTGAATGTGGACAACGTGGTGGATATTTTGAAATGACCAACATTCCTCCAGAGACTGTTGACGAGATCTATAAAGTTGCATCAATATCACTTAGTCCAAATGTTCCAGCACAAATATTTATGGGACTAATGATCAATCCACCCAAACCTGGAGATATTTCTTACGACAAATTTGTTAGGGAGAGCAAAGGAATACTTGAATCACTAAGAAGAAGAGCAAGGATCATGACTGATGGATTCAACAGCTGCAGGAATGTTGTTTGCAATTTCACAGAAGGTGCCATGTATTCATTCCCTCAAATAAAACTGCCACCAAAAGCTTTAGAGACTGCTAAACAGGCTGGAAAAGCTGCAGATGTTTACTACTGTCTCAAGCTTTTGGAAGCCACTGGCATATCCACTGTTCCTGGCTCAGGATTTGGACAGAAAGAAGGGGTTTTCCATTTGAGGACAACTATATTACCAGCTGAGGAAGAAATGCCTGCTATTATGGATAGTTTCAAAAAGTTCAATGATGATTTCATGGAACAATATGATGACCACAGAGGTTATTCAAGGTTGTAA

Protein sequence

>Msa0842370

MPPKPLDYESINENVKKAQYAVRGELYLRATELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKQYLSFTSGGLGAYSDSRGTPAVRKEVAEFIQRRDGYPSDPEFIYLTDGASKAVMQILNTIIRGEGDGIMVPVPQYPLYSATIALLGGTLVPYYLEETANWGLDTNELRKSVREARYKGLNVKAMVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDMGPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQIFMGLMINPPKPGDISYDKFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFPQIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPAIMDSFKKFNDDFMEQYDDHRGYSRL*