AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272990 MtrunA17_Chr4g0046291 74.043 470 107 3 3 461 5 470 0.0 715
Msa0272990 MtrunA17_Chr4g0040681 45.984 498 200 10 3 437 6 497 7.01e-138 405
Msa0272990 MtrunA17_Chr2g0283011 98.611 72 0 1 1 71 1 72 1.73e-41 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272990 AT1G28520.4 65.021 466 138 6 3 450 6 464 0.0 592
Msa0272990 AT1G28520.1 65.021 466 138 6 3 450 6 464 0.0 592
Msa0272990 AT1G28520.2 65.021 466 138 6 3 450 6 464 0.0 592
Msa0272990 AT1G28520.5 65.021 466 138 6 3 450 6 464 0.0 592
Msa0272990 AT1G28520.3 62.232 466 135 7 3 450 6 448 0.0 553
Msa0272990 AT2G42400.1 49.318 440 176 10 10 416 9 434 1.64e-124 370

Find 156 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCATCACTTGCTTTC+TGG -0.000768 2_3:-4587294 None:intergenic
GTTGCCGCTCCCTCGCATTC+TGG 0.120554 2_3:-4587015 None:intergenic
TAAATGTTTCAAATCCTTTA+TGG 0.122436 2_3:+4587943 Msa0272990:three_prime_UTR
TTCTCTCTAAATTGTGTCTT+TGG 0.178535 2_3:+4585010 Msa0272990:five_prime_UTR
GTATGTACTCATCCATTAAT+AGG 0.244748 2_3:-4586573 None:intergenic
TTGGAACTAAAGCTCGTTAA+TGG 0.245316 2_3:+4587428 Msa0272990:CDS
TCAGCATGATTCCCTATTAA+TGG 0.250839 2_3:+4586561 Msa0272990:CDS
CGGTTAAATAGGTGAGTTTA+GGG 0.264616 2_3:+4585525 Msa0272990:five_prime_UTR
CATAAAGATGCCACTCAAAA+TGG 0.277276 2_3:-4587364 None:intergenic
TAACTTTCATTATCATGATT+TGG 0.277336 2_3:-4587837 None:intergenic
CGAGTTGTTAGTTGATTTAC+TGG 0.280780 2_3:-4586614 None:intergenic
CAGAAAATGCAAACAGCTTC+AGG 0.298139 2_3:-4585271 None:intergenic
ATGGATGTTTCCTTATCTAT+TGG 0.300796 2_3:+4587989 Msa0272990:three_prime_UTR
AAATGTTTCAAATCCTTTAT+GGG 0.306340 2_3:+4587944 Msa0272990:three_prime_UTR
TCGGTTAAATAGGTGAGTTT+AGG 0.307286 2_3:+4585524 Msa0272990:five_prime_UTR
TTGCCGCTCCCTCGCATTCT+GGG 0.309111 2_3:-4587014 None:intergenic
AGGTCGTTGCCTGATTATAA+TGG 0.319828 2_3:+4587254 Msa0272990:CDS
AATGAACACATATATGCTTA+TGG 0.322004 2_3:-4584985 None:intergenic
GGTAGATAGGTAGGTATATA+AGG 0.325810 2_3:-4586751 None:intergenic
GTCAGCCTTGGCATTAGGTT+TGG 0.334729 2_3:-4587567 None:intergenic
GTCTGCATATTCTGATCATT+AGG 0.347297 2_3:-4586036 None:intergenic
GAGTACATACACTCCATCTT+AGG 0.353453 2_3:+4586586 Msa0272990:CDS
TCACTCTCTATGGCCATGTT+TGG 0.354762 2_3:+4585295 Msa0272990:five_prime_UTR
AACACTATGCTCATGACTTT+CGG 0.358344 2_3:+4585036 Msa0272990:five_prime_UTR
GGACTGAAACTCGGTTAAAT+AGG 0.360190 2_3:+4585514 Msa0272990:five_prime_UTR
CCCATGTCAGCCTTGGCATT+AGG 0.366697 2_3:-4587572 None:intergenic
AGGGCAGATGCTTGGTAGAT+AGG 0.368518 2_3:-4586764 None:intergenic
AAGCAAGTGATGAAAGAGTT+TGG 0.371141 2_3:+4587299 Msa0272990:CDS
TCCTGCTTCTTCTTTGCAGC+AGG 0.376005 2_3:+4585775 Msa0272990:CDS
AACAACAAATTGAAACAATA+AGG 0.380267 2_3:-4585097 None:intergenic
ATCATTTGTTATCTTTGTCC+TGG 0.382306 2_3:-4587462 None:intergenic
AGCAGAATGTCTGTTATCAT+AGG 0.386907 2_3:-4587534 None:intergenic
TTTGTATAAGTTTCCCATAA+AGG 0.389773 2_3:-4587957 None:intergenic
AGGTTCAAAATGTGCACTTT+GGG 0.394325 2_3:+4586804 Msa0272990:CDS
TGCTTATGAAAGTAGATAAT+AGG 0.397927 2_3:-4585333 None:intergenic
CCTCCTCCTTCCGCTTTCCT+AGG 0.410735 2_3:+4586784 Msa0272990:CDS
GCTTCAGGATAAGTTTATAA+TGG 0.418715 2_3:-4585256 None:intergenic
CGACATTTCATATTCGCAAT+GGG 0.429339 2_3:+4587750 Msa0272990:three_prime_UTR
TGCCACTCAAAATGGTTTAG+TGG 0.430399 2_3:-4587356 None:intergenic
TCAAAATGGTTTAGTGGTTG+TGG 0.432899 2_3:-4587350 None:intergenic
CCTTCCACTCACGAAGCATC+TGG 0.436154 2_3:-4585733 None:intergenic
TCATGCTTAGGCACAGCTAA+TGG 0.436229 2_3:-4586012 None:intergenic
TAGGTTCAAAATGTGCACTT+TGG 0.438695 2_3:+4586803 Msa0272990:CDS
GTGATGCATGTGCGTTATAT+CGG 0.439847 2_3:+4587405 Msa0272990:CDS
CTTTCTAGTGTACATAGTAT+TGG 0.442899 2_3:+4587912 Msa0272990:three_prime_UTR
CTGCAGTAGCCTACATATAT+CGG 0.447566 2_3:-4585959 None:intergenic
GGTCGTTGCCTGATTATAAT+GGG 0.452127 2_3:+4587255 Msa0272990:CDS
TATGTACTCATCCATTAATA+GGG 0.456560 2_3:-4586572 None:intergenic
TGGAACTAAAGCTCGTTAAT+GGG 0.459138 2_3:+4587429 Msa0272990:CDS
AGTTTAGGGCTTCCCTAGGC+AGG 0.460315 2_3:+4585539 Msa0272990:five_prime_UTR
GCTGCTCTTGCTTTAAATGA+AGG 0.460368 2_3:+4586886 Msa0272990:CDS
GATGTTTCCTTATCTATTGG+AGG 0.462114 2_3:+4587992 Msa0272990:three_prime_UTR
CATCCCCGCCCATTATAATC+AGG 0.465616 2_3:-4587263 None:intergenic
TGATCATTAGGTTCATGCTT+AGG 0.466635 2_3:-4586024 None:intergenic
TAGCCCCAGTTCTACGACCT+GGG 0.466781 2_3:+4586920 Msa0272990:CDS
TGCTTTCTTACAGCTACCCT+TGG 0.466878 2_3:-4585582 None:intergenic
ACCTAATGCCAAGGCTGACA+TGG 0.476238 2_3:+4587571 Msa0272990:CDS
CACATATATGCTTATGGAAG+CGG 0.482953 2_3:-4584979 None:intergenic
CGTAGAACTGGGGCTATGCC+TGG 0.483033 2_3:-4586913 None:intergenic
TTTCTCTGTGATGGTGATGT+TGG 0.485020 2_3:+4585165 Msa0272990:five_prime_UTR
TGATCTGCAGTTTGCTAGGA+AGG 0.490071 2_3:+4585667 Msa0272990:CDS
TGAAATGTCGTATCAGCAAG+TGG 0.490550 2_3:-4587737 None:intergenic
AAGTTATTAACATTATTTGA+AGG 0.492304 2_3:+4587854 Msa0272990:three_prime_UTR
CTGATTATAATGGGCGGGGA+TGG 0.493655 2_3:+4587264 Msa0272990:CDS
CTAAACCTCAAGTCCTGCCT+AGG 0.497959 2_3:-4585552 None:intergenic
CTTATACAAAACTCAAAAGA+TGG 0.498859 2_3:+4587970 Msa0272990:three_prime_UTR
GGTGAGCAAGATGCTGCGTT+AGG 0.501565 2_3:+4587690 Msa0272990:three_prime_UTR
TCCTAGCAAACTGCAGATCA+AGG 0.504979 2_3:-4585664 None:intergenic
GTTGCCTGATTATAATGGGC+GGG 0.508969 2_3:+4587259 Msa0272990:CDS
TGGTTGTGGATCCATGTAGT+AGG 0.510429 2_3:-4587336 None:intergenic
CATCCCAGAATGCGAGGGAG+CGG 0.511232 2_3:+4587011 Msa0272990:CDS
TTTACTGGGAGCTCCTAAGA+TGG 0.517698 2_3:-4586599 None:intergenic
AACACCACCCATGTCAGCCT+TGG 0.521369 2_3:-4587579 None:intergenic
CCTAGGAAAGCGGAAGGAGG+AGG 0.522377 2_3:-4586784 None:intergenic
GAAGGAGGAGGGCAGATGCT+TGG 0.522630 2_3:-4586772 None:intergenic
CTCTCAACAAGATAGTCATA+TGG 0.523925 2_3:-4587629 None:intergenic
TGTGGATGTCGCGCTTCTTG+AGG 0.525115 2_3:+4585700 Msa0272990:CDS
AGCATCACACAGGCTTATCA+AGG 0.532332 2_3:+4585601 Msa0272990:CDS
CACAAGTTCAACCCTTCCGC+GGG 0.534065 2_3:-4586838 None:intergenic
ACATATATGCTTATGGAAGC+GGG 0.539979 2_3:-4584978 None:intergenic
CCAGATGCTTCGTGAGTGGA+AGG 0.543218 2_3:+4585733 Msa0272990:CDS
TGATAACAGACATTCTGCTA+AGG 0.543724 2_3:+4587538 Msa0272990:CDS
GATTTGGAAAATAAAGACTC+AGG 0.545368 2_3:-4587821 None:intergenic
GGCACAGGCTTTAGTGAGGA+TGG 0.545649 2_3:+4586721 Msa0272990:CDS
GCTTCCCTAGGCAGGACTTG+AGG 0.546972 2_3:+4585547 Msa0272990:five_prime_UTR
ACCTGCTGCAAAGAAGAAGC+AGG 0.547011 2_3:-4585776 None:intergenic
CATTCTCGACCGATATATGT+AGG 0.550090 2_3:+4585950 Msa0272990:CDS
CAGATGCTTGGTAGATAGGT+AGG 0.551289 2_3:-4586760 None:intergenic
GCTTTAAATGAAGGACAACC+AGG 0.554170 2_3:+4586895 Msa0272990:CDS
GCAGAATGTCTGTTATCATA+GGG 0.554543 2_3:-4587533 None:intergenic
AGTTAAGGATAATTTACTGT+TGG 0.554729 2_3:+4586951 Msa0272990:CDS
ATAGCCCCAGTTCTACGACC+TGG 0.557433 2_3:+4586919 Msa0272990:CDS
TGAGGTTTAGATGATTTCCA+AGG 0.559690 2_3:+4585565 Msa0272990:exon
ATAGGGAATCATGCTGATGT+TGG 0.560720 2_3:-4586555 None:intergenic
TTAATGGGAAGAAGAGCTCC+AGG 0.561240 2_3:+4587444 Msa0272990:CDS
TCCTTGATCTGCAGTTTGCT+AGG 0.561339 2_3:+4585663 Msa0272990:CDS
ACGACATTTCATATTCGCAA+TGG 0.561626 2_3:+4587749 Msa0272990:three_prime_UTR
TTTCGCAGTGGACTGAAACT+CGG 0.562497 2_3:+4585505 Msa0272990:intron
CAGTAAATCAACTAACAACT+CGG 0.567663 2_3:+4586615 Msa0272990:CDS
ACACAAGTTCAACCCTTCCG+CGG 0.569071 2_3:-4586839 None:intergenic
TGCAAAGAAGAAGCAGGAGA+AGG 0.571409 2_3:-4585770 None:intergenic
AAGTCTCCGTGGAATGCACC+TGG 0.578340 2_3:+4587042 Msa0272990:CDS
CTAGGAAAGCGGAAGGAGGA+GGG 0.578498 2_3:-4586783 None:intergenic
TTGCCTGATTATAATGGGCG+GGG 0.584990 2_3:+4587260 Msa0272990:CDS
AAGTGATGAAAGAGTTTGGA+GGG 0.587404 2_3:+4587303 Msa0272990:CDS
GACTGTTCAAGACCCGCGGA+AGG 0.587498 2_3:+4586826 Msa0272990:CDS
GCTCTTAGTGCAAAGACAGA+AGG 0.588265 2_3:+4586976 Msa0272990:CDS
GATAACAGACATTCTGCTAA+GGG 0.588460 2_3:+4587539 Msa0272990:CDS
ACAAGATAGTCATATGGTGA+TGG 0.593941 2_3:-4587623 None:intergenic
GGTGAGTTTAGGGCTTCCCT+AGG 0.595165 2_3:+4585535 Msa0272990:five_prime_UTR
CAGTTACTGATCTTCAGAAG+CGG 0.596139 2_3:+4587486 Msa0272990:CDS
TTCACCAGATGCTTCGTGAG+TGG 0.596799 2_3:+4585729 Msa0272990:CDS
TGCATGTGCGTTATATCGGT+TGG 0.607322 2_3:+4587409 Msa0272990:CDS
CAGAGCCAAACCTAATGCCA+AGG 0.608334 2_3:+4587562 Msa0272990:CDS
AGGAGAAGGCTCATTGAGCT+CGG 0.609324 2_3:-4585756 None:intergenic
AATCAACTAACAACTCGGAT+AGG 0.609346 2_3:+4586620 Msa0272990:CDS
AGCCCCAGTTCTACGACCTG+GGG 0.611570 2_3:+4586921 Msa0272990:CDS
CCTAATGCCAAGGCTGACAT+GGG 0.613097 2_3:+4587572 Msa0272990:CDS
CAAATAAGTCAATCCAAACA+TGG 0.613289 2_3:-4585308 None:intergenic
CTAATACCAGGTGCATTCCA+CGG 0.614138 2_3:-4587048 None:intergenic
TGTCGGCATCCCAGAATGCG+AGG 0.614404 2_3:+4587005 Msa0272990:CDS
GCTACTGCAGCTCTGTGAAG+AGG 0.620067 2_3:+4585972 Msa0272990:CDS
AAGACAGAAGGAAAAGATGT+CGG 0.620071 2_3:+4586988 Msa0272990:CDS
GAGGTTTAGATGATTTCCAA+GGG 0.620877 2_3:+4585566 Msa0272990:exon
ACTATGCTCATGACTTTCGG+TGG 0.623859 2_3:+4585039 Msa0272990:five_prime_UTR
TTGATCAAAAGCATATTCCA+AGG 0.625578 2_3:-4585230 None:intergenic
TAAACCTCAAGTCCTGCCTA+GGG 0.625924 2_3:-4585551 None:intergenic
AGGCACAGCTAATGGACTAG+TGG 0.628612 2_3:-4586004 None:intergenic
CGTTGCCTGATTATAATGGG+CGG 0.632470 2_3:+4587258 Msa0272990:CDS
TAGAGGCACAGGCTTTAGTG+AGG 0.634083 2_3:+4586717 Msa0272990:CDS
TTTGAACCTAGGAAAGCGGA+AGG 0.634334 2_3:-4586790 None:intergenic
GCTGAAGAGATCCTACTACA+TGG 0.634906 2_3:+4587325 Msa0272990:CDS
CAACTAACAACTCGGATAGG+CGG 0.636833 2_3:+4586623 Msa0272990:CDS
TCTCGAAGAGCATTTGAGAG+TGG 0.636901 2_3:+4587218 Msa0272990:CDS
GAAATGTCGTATCAGCAAGT+GGG 0.637231 2_3:-4587736 None:intergenic
ACTGTTCAAGACCCGCGGAA+GGG 0.637959 2_3:+4586827 Msa0272990:CDS
ATTTGGAAAATAAAGACTCA+GGG 0.640291 2_3:-4587820 None:intergenic
TTGGGACTGTTCAAGACCCG+CGG 0.641938 2_3:+4586822 Msa0272990:CDS
GAAGCGCGACATCCACACTA+CGG 0.643778 2_3:-4585694 None:intergenic
TCACATGCAGATCATCTACA+TGG 0.644881 2_3:-4585637 None:intergenic
GAACCTAGGAAAGCGGAAGG+AGG 0.646171 2_3:-4586787 None:intergenic
TCTGTTATCATAGGGAAACT+CGG 0.647001 2_3:-4587525 None:intergenic
CGGCAACTGCAAAGTCTCCG+TGG 0.652685 2_3:+4587031 Msa0272990:CDS
GTCGGCATCCCAGAATGCGA+GGG 0.657248 2_3:+4587006 Msa0272990:CDS
TAGGAAGGAGAGCCGTAGTG+TGG 0.661628 2_3:+4585682 Msa0272990:CDS
GAGTTGTTAGTTGATTTACT+GGG 0.663415 2_3:-4586613 None:intergenic
CAAGTGATGAAAGAGTTTGG+AGG 0.680936 2_3:+4587302 Msa0272990:CDS
TGATGTGATTGATCTCGAAG+TGG 0.682880 2_3:+4587668 Msa0272990:exon
GCTGTAAGAAAGCATCACAC+AGG 0.691286 2_3:+4585591 Msa0272990:CDS
ACACAGGCTTATCAAGGACA+AGG 0.694542 2_3:+4585607 Msa0272990:CDS
GACATTTCATATTCGCAATG+GGG 0.702113 2_3:+4587751 Msa0272990:three_prime_UTR
GATGTGATTGATCTCGAAGT+GGG 0.707108 2_3:+4587669 Msa0272990:exon
TGGAAAATAAAGACTCAGGG+CGG 0.716558 2_3:-4587817 None:intergenic
AGAGTGGAAACAGAAAGCAA+AGG 0.717117 2_3:+4587234 Msa0272990:CDS
GCCCCAGTTCTACGACCTGG+GGG 0.725582 2_3:+4586922 Msa0272990:CDS
AATGCCAAGGCTGACATGGG+TGG 0.739584 2_3:+4587575 Msa0272990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTTTTTAGAGAAA+AGG - chr2_3:4586330-4586349 None:intergenic 10.0%
!! AAATTTGCATATTAAAGTTA+AGG - chr2_3:4585819-4585838 None:intergenic 15.0%
!! TTAATATGCAAATTTAATTG+TGG + chr2_3:4585824-4585843 Msa0272990:intron 15.0%
!!! TTTTATTTTTTCTGTAGTAT+TGG + chr2_3:4586151-4586170 Msa0272990:intron 15.0%
!! AAACACATAAATAGTTTAAT+AGG - chr2_3:4587094-4587113 None:intergenic 15.0%
!! AAGTTATTAACATTATTTGA+AGG + chr2_3:4587854-4587873 Msa0272990:three_prime_UTR 15.0%
!! AGGAAAAAAAAAATAACTAG+AGG - chr2_3:4585080-4585099 None:intergenic 20.0%
!! AACAACAAATTGAAACAATA+AGG - chr2_3:4585100-4585119 None:intergenic 20.0%
!!! TTTAGAATTTCACAACTTTT+AGG + chr2_3:4585197-4585216 Msa0272990:five_prime_UTR 20.0%
!!! TTAGAATTTCACAACTTTTA+GGG + chr2_3:4585198-4585217 Msa0272990:five_prime_UTR 20.0%
!! TTAATTCATATACTAGAGTA+AGG + chr2_3:4586221-4586240 Msa0272990:intron 20.0%
!! TAATTCATATACTAGAGTAA+GGG + chr2_3:4586222-4586241 Msa0272990:intron 20.0%
!!! GTTGTATTGTTTTTTATATG+TGG + chr2_3:4586301-4586320 Msa0272990:intron 20.0%
!!! TTATTTTCAATTGACAGAAA+TGG + chr2_3:4586357-4586376 Msa0272990:intron 20.0%
!! TAACTTTCATTATCATGATT+TGG - chr2_3:4587840-4587859 None:intergenic 20.0%
!! TAAATGTTTCAAATCCTTTA+TGG + chr2_3:4587943-4587962 Msa0272990:three_prime_UTR 20.0%
!! AAATGTTTCAAATCCTTTAT+GGG + chr2_3:4587944-4587963 Msa0272990:three_prime_UTR 20.0%
! AATGAACACATATATGCTTA+TGG - chr2_3:4584988-4585007 None:intergenic 25.0%
!! AAAAAAATAACTAGAGGCAT+TGG - chr2_3:4585074-4585093 None:intergenic 25.0%
! CACAGAGAAAAAAAAAATGA+GGG - chr2_3:4585155-4585174 None:intergenic 25.0%
! TCACAGAGAAAAAAAAAATG+AGG - chr2_3:4585156-4585175 None:intergenic 25.0%
!!! CATTTTTTTTTTCTCTGTGA+TGG + chr2_3:4585156-4585175 Msa0272990:five_prime_UTR 25.0%
! TGCTTATGAAAGTAGATAAT+AGG - chr2_3:4585336-4585355 None:intergenic 25.0%
! ATTTAATTGTGGATTTGTGA+TGG + chr2_3:4585835-4585854 Msa0272990:intron 25.0%
! GAGAAAATTGGTATTAACTA+AGG - chr2_3:4586411-4586430 None:intergenic 25.0%
! ATGATGCATAAGAACAAATT+GGG - chr2_3:4586449-4586468 None:intergenic 25.0%
! TATGATGCATAAGAACAAAT+TGG - chr2_3:4586450-4586469 None:intergenic 25.0%
! TATGATTGTAACAAGTTTCT+TGG + chr2_3:4586514-4586533 Msa0272990:intron 25.0%
! TATGTACTCATCCATTAATA+GGG - chr2_3:4586575-4586594 None:intergenic 25.0%
!!! CGACATTTTGATTCAAAATT+AGG - chr2_3:4586649-4586668 None:intergenic 25.0%
! AGTTAAGGATAATTTACTGT+TGG + chr2_3:4586951-4586970 Msa0272990:CDS 25.0%
!! TTTGATCTTTTTGTTCTTGA+GGG + chr2_3:4587161-4587180 Msa0272990:CDS 25.0%
! ATTTGGAAAATAAAGACTCA+GGG - chr2_3:4587823-4587842 None:intergenic 25.0%
! TTTGTATAAGTTTCCCATAA+AGG - chr2_3:4587960-4587979 None:intergenic 25.0%
! CTTATACAAAACTCAAAAGA+TGG + chr2_3:4587970-4587989 Msa0272990:three_prime_UTR 25.0%
!!! TTTTTTACCTCCAATAGATA+AGG - chr2_3:4588002-4588021 None:intergenic 25.0%
! GGAGGTAAAAAAAATTGTAA+AGG + chr2_3:4588010-4588029 Msa0272990:three_prime_UTR 25.0%
TTCTCTCTAAATTGTGTCTT+TGG + chr2_3:4585010-4585029 Msa0272990:five_prime_UTR 30.0%
! TTGATCAAAAGCATATTCCA+AGG - chr2_3:4585233-4585252 None:intergenic 30.0%
GCTTCAGGATAAGTTTATAA+TGG - chr2_3:4585259-4585278 None:intergenic 30.0%
CAAATAAGTCAATCCAAACA+TGG - chr2_3:4585311-4585330 None:intergenic 30.0%
CTTGTAAGACTATTTAGAAG+TGG + chr2_3:4585356-4585375 Msa0272990:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr2_3:4585400-4585419 None:intergenic 30.0%
AACTTGAATGGCAATATTTG+TGG + chr2_3:4585867-4585886 Msa0272990:intron 30.0%
! ATTTGAGTTTGCCATGTTTA+TGG + chr2_3:4585901-4585920 Msa0272990:intron 30.0%
! TTTGAGTTTGCCATGTTTAT+GGG + chr2_3:4585902-4585921 Msa0272990:intron 30.0%
CTTTGTGATTTGATCATAAC+TGG + chr2_3:4586122-4586141 Msa0272990:intron 30.0%
GTATGTACTCATCCATTAAT+AGG - chr2_3:4586576-4586595 None:intergenic 30.0%
! GAGTTGTTAGTTGATTTACT+GGG - chr2_3:4586616-4586635 None:intergenic 30.0%
CAGTAAATCAACTAACAACT+CGG + chr2_3:4586615-4586634 Msa0272990:CDS 30.0%
! AACTGTTATAGTGCTTTTAG+AGG + chr2_3:4586700-4586719 Msa0272990:CDS 30.0%
! CTTTGATCTTTTTGTTCTTG+AGG + chr2_3:4587160-4587179 Msa0272990:CDS 30.0%
! TTGATCTTTTTGTTCTTGAG+GGG + chr2_3:4587162-4587181 Msa0272990:CDS 30.0%
!! ATCATTTGTTATCTTTGTCC+TGG - chr2_3:4587465-4587484 None:intergenic 30.0%
GATTTGGAAAATAAAGACTC+AGG - chr2_3:4587824-4587843 None:intergenic 30.0%
! CTTTCTAGTGTACATAGTAT+TGG + chr2_3:4587912-4587931 Msa0272990:three_prime_UTR 30.0%
ATGGATGTTTCCTTATCTAT+TGG + chr2_3:4587989-4588008 Msa0272990:three_prime_UTR 30.0%
ACATATATGCTTATGGAAGC+GGG - chr2_3:4584981-4585000 None:intergenic 35.0%
CACATATATGCTTATGGAAG+CGG - chr2_3:4584982-4585001 None:intergenic 35.0%
AACACTATGCTCATGACTTT+CGG + chr2_3:4585036-4585055 Msa0272990:five_prime_UTR 35.0%
!! GAATTTCACAACTTTTAGGG+TGG + chr2_3:4585201-4585220 Msa0272990:five_prime_UTR 35.0%
TTCTATCTTGTATTTCGCAG+TGG + chr2_3:4585493-4585512 Msa0272990:intron 35.0%
TCGGTTAAATAGGTGAGTTT+AGG + chr2_3:4585524-4585543 Msa0272990:five_prime_UTR 35.0%
CGGTTAAATAGGTGAGTTTA+GGG + chr2_3:4585525-4585544 Msa0272990:five_prime_UTR 35.0%
TGAGGTTTAGATGATTTCCA+AGG + chr2_3:4585565-4585584 Msa0272990:exon 35.0%
GAGGTTTAGATGATTTCCAA+GGG + chr2_3:4585566-4585585 Msa0272990:exon 35.0%
TGGACACATGTAAACTTGAA+TGG + chr2_3:4585855-4585874 Msa0272990:intron 35.0%
CATGTTTATGGGTGATGATA+GGG + chr2_3:4585913-4585932 Msa0272990:intron 35.0%
TGATCATTAGGTTCATGCTT+AGG - chr2_3:4586027-4586046 None:intergenic 35.0%
GTCTGCATATTCTGATCATT+AGG - chr2_3:4586039-4586058 None:intergenic 35.0%
TGTATGAATAATCGCTGAAG+AGG - chr2_3:4586101-4586120 None:intergenic 35.0%
! TGAGTTGTTGGTGAGAAAAT+TGG - chr2_3:4586423-4586442 None:intergenic 35.0%
TCAGCATGATTCCCTATTAA+TGG + chr2_3:4586561-4586580 Msa0272990:CDS 35.0%
! CGAGTTGTTAGTTGATTTAC+TGG - chr2_3:4586617-4586636 None:intergenic 35.0%
AATCAACTAACAACTCGGAT+AGG + chr2_3:4586620-4586639 Msa0272990:CDS 35.0%
GGTAGATAGGTAGGTATATA+AGG - chr2_3:4586754-4586773 None:intergenic 35.0%
! ACATTTTGAACCTAGGAAAG+CGG - chr2_3:4586797-4586816 None:intergenic 35.0%
! AAAGTGCACATTTTGAACCT+AGG - chr2_3:4586804-4586823 None:intergenic 35.0%
TAGGTTCAAAATGTGCACTT+TGG + chr2_3:4586803-4586822 Msa0272990:CDS 35.0%
AGGTTCAAAATGTGCACTTT+GGG + chr2_3:4586804-4586823 Msa0272990:CDS 35.0%
AAGACAGAAGGAAAAGATGT+CGG + chr2_3:4586988-4587007 Msa0272990:CDS 35.0%
GCATTCTACATTCTAATACC+AGG - chr2_3:4587063-4587082 None:intergenic 35.0%
! TGATCTTTTTGTTCTTGAGG+GGG + chr2_3:4587163-4587182 Msa0272990:CDS 35.0%
AAGCAAGTGATGAAAGAGTT+TGG + chr2_3:4587299-4587318 Msa0272990:CDS 35.0%
AAGTGATGAAAGAGTTTGGA+GGG + chr2_3:4587303-4587322 Msa0272990:CDS 35.0%
TCAAAATGGTTTAGTGGTTG+TGG - chr2_3:4587353-4587372 None:intergenic 35.0%
! AACCACTAAACCATTTTGAG+TGG + chr2_3:4587354-4587373 Msa0272990:CDS 35.0%
CATAAAGATGCCACTCAAAA+TGG - chr2_3:4587367-4587386 None:intergenic 35.0%
TTGGAACTAAAGCTCGTTAA+TGG + chr2_3:4587428-4587447 Msa0272990:CDS 35.0%
TGGAACTAAAGCTCGTTAAT+GGG + chr2_3:4587429-4587448 Msa0272990:CDS 35.0%
TCTGTTATCATAGGGAAACT+CGG - chr2_3:4587528-4587547 None:intergenic 35.0%
GCAGAATGTCTGTTATCATA+GGG - chr2_3:4587536-4587555 None:intergenic 35.0%
AGCAGAATGTCTGTTATCAT+AGG - chr2_3:4587537-4587556 None:intergenic 35.0%
TGATAACAGACATTCTGCTA+AGG + chr2_3:4587538-4587557 Msa0272990:CDS 35.0%
GATAACAGACATTCTGCTAA+GGG + chr2_3:4587539-4587558 Msa0272990:CDS 35.0%
ACAAGATAGTCATATGGTGA+TGG - chr2_3:4587626-4587645 None:intergenic 35.0%
CTCTCAACAAGATAGTCATA+TGG - chr2_3:4587632-4587651 None:intergenic 35.0%
ACGACATTTCATATTCGCAA+TGG + chr2_3:4587749-4587768 Msa0272990:three_prime_UTR 35.0%
CGACATTTCATATTCGCAAT+GGG + chr2_3:4587750-4587769 Msa0272990:three_prime_UTR 35.0%
GACATTTCATATTCGCAATG+GGG + chr2_3:4587751-4587770 Msa0272990:three_prime_UTR 35.0%
GATGTTTCCTTATCTATTGG+AGG + chr2_3:4587992-4588011 Msa0272990:three_prime_UTR 35.0%
! TTTCTCTGTGATGGTGATGT+TGG + chr2_3:4585165-4585184 Msa0272990:five_prime_UTR 40.0%
CAGAAAATGCAAACAGCTTC+AGG - chr2_3:4585274-4585293 None:intergenic 40.0%
! CTGAAGCTGTTTGCATTTTC+TGG + chr2_3:4585272-4585291 Msa0272990:five_prime_UTR 40.0%
!! CATTTTCTGGTCACTCTCTA+TGG + chr2_3:4585285-4585304 Msa0272990:five_prime_UTR 40.0%
GGACTGAAACTCGGTTAAAT+AGG + chr2_3:4585514-4585533 Msa0272990:five_prime_UTR 40.0%
TCACATGCAGATCATCTACA+TGG - chr2_3:4585640-4585659 None:intergenic 40.0%
CCTATCATCACCCATAAACA+TGG - chr2_3:4585915-4585934 None:intergenic 40.0%
CCATGTTTATGGGTGATGAT+AGG + chr2_3:4585912-4585931 Msa0272990:intron 40.0%
CATTCTCGACCGATATATGT+AGG + chr2_3:4585950-4585969 Msa0272990:CDS 40.0%
CTGCAGTAGCCTACATATAT+CGG - chr2_3:4585962-4585981 None:intergenic 40.0%
ATAATCGCTGAAGAGGAGAA+AGG - chr2_3:4586094-4586113 None:intergenic 40.0%
TACTAGAGTAAGGGATGCTT+TGG + chr2_3:4586231-4586250 Msa0272990:intron 40.0%
ATTGACAGAAATGGAGAGCA+AGG + chr2_3:4586366-4586385 Msa0272990:intron 40.0%
AATGGAGAGCAAGGATTTGA+TGG + chr2_3:4586375-4586394 Msa0272990:intron 40.0%
!! CAAATTGGGCTTTGAGTTGT+TGG - chr2_3:4586435-4586454 None:intergenic 40.0%
ATAGGGAATCATGCTGATGT+TGG - chr2_3:4586558-4586577 None:intergenic 40.0%
GAGTACATACACTCCATCTT+AGG + chr2_3:4586586-4586605 Msa0272990:CDS 40.0%
!! TATAGTGCTTTTAGAGGCAC+AGG + chr2_3:4586706-4586725 Msa0272990:CDS 40.0%
! GCTGCTCTTGCTTTAAATGA+AGG + chr2_3:4586886-4586905 Msa0272990:CDS 40.0%
! GCTTTAAATGAAGGACAACC+AGG + chr2_3:4586895-4586914 Msa0272990:CDS 40.0%
AGAGTGGAAACAGAAAGCAA+AGG + chr2_3:4587234-4587253 Msa0272990:CDS 40.0%
AGGTCGTTGCCTGATTATAA+TGG + chr2_3:4587254-4587273 Msa0272990:CDS 40.0%
GGTCGTTGCCTGATTATAAT+GGG + chr2_3:4587255-4587274 Msa0272990:CDS 40.0%
CTCTTTCATCACTTGCTTTC+TGG - chr2_3:4587297-4587316 None:intergenic 40.0%
CAAGTGATGAAAGAGTTTGG+AGG + chr2_3:4587302-4587321 Msa0272990:CDS 40.0%
TGCCACTCAAAATGGTTTAG+TGG - chr2_3:4587359-4587378 None:intergenic 40.0%
GTGATGCATGTGCGTTATAT+CGG + chr2_3:4587405-4587424 Msa0272990:CDS 40.0%
CAGTTACTGATCTTCAGAAG+CGG + chr2_3:4587486-4587505 Msa0272990:CDS 40.0%
TGATGTGATTGATCTCGAAG+TGG + chr2_3:4587668-4587687 Msa0272990:exon 40.0%
GATGTGATTGATCTCGAAGT+GGG + chr2_3:4587669-4587688 Msa0272990:exon 40.0%
GAAATGTCGTATCAGCAAGT+GGG - chr2_3:4587739-4587758 None:intergenic 40.0%
TGAAATGTCGTATCAGCAAG+TGG - chr2_3:4587740-4587759 None:intergenic 40.0%
TGGAAAATAAAGACTCAGGG+CGG - chr2_3:4587820-4587839 None:intergenic 40.0%
ACTATGCTCATGACTTTCGG+TGG + chr2_3:4585039-4585058 Msa0272990:five_prime_UTR 45.0%
!!! TTTTAGGGTGGAGAATGCCT+TGG + chr2_3:4585213-4585232 Msa0272990:five_prime_UTR 45.0%
TCACTCTCTATGGCCATGTT+TGG + chr2_3:4585295-4585314 Msa0272990:five_prime_UTR 45.0%
!! TTTCGCAGTGGACTGAAACT+CGG + chr2_3:4585505-4585524 Msa0272990:intron 45.0%
TAAACCTCAAGTCCTGCCTA+GGG - chr2_3:4585554-4585573 None:intergenic 45.0%
TGCTTTCTTACAGCTACCCT+TGG - chr2_3:4585585-4585604 None:intergenic 45.0%
!! GCTGTAAGAAAGCATCACAC+AGG + chr2_3:4585591-4585610 Msa0272990:CDS 45.0%
AGCATCACACAGGCTTATCA+AGG + chr2_3:4585601-4585620 Msa0272990:CDS 45.0%
ACACAGGCTTATCAAGGACA+AGG + chr2_3:4585607-4585626 Msa0272990:CDS 45.0%
! TCCTTGATCTGCAGTTTGCT+AGG + chr2_3:4585663-4585682 Msa0272990:CDS 45.0%
TCCTAGCAAACTGCAGATCA+AGG - chr2_3:4585667-4585686 None:intergenic 45.0%
!! TGATCTGCAGTTTGCTAGGA+AGG + chr2_3:4585667-4585686 Msa0272990:CDS 45.0%
TGCAAAGAAGAAGCAGGAGA+AGG - chr2_3:4585773-4585792 None:intergenic 45.0%
GTTTATGGGTGATGATAGGG+TGG + chr2_3:4585916-4585935 Msa0272990:intron 45.0%
TCATGCTTAGGCACAGCTAA+TGG - chr2_3:4586015-4586034 None:intergenic 45.0%
!! AATCATGCTGATGTTGGCTC+TGG - chr2_3:4586552-4586571 None:intergenic 45.0%
TTTACTGGGAGCTCCTAAGA+TGG - chr2_3:4586602-4586621 None:intergenic 45.0%
CAACTAACAACTCGGATAGG+CGG + chr2_3:4586623-4586642 Msa0272990:CDS 45.0%
CAGATGCTTGGTAGATAGGT+AGG - chr2_3:4586763-4586782 None:intergenic 45.0%
TTTGAACCTAGGAAAGCGGA+AGG - chr2_3:4586793-4586812 None:intergenic 45.0%
ACCTGGGGGAATTGAAGTTA+AGG + chr2_3:4586936-4586955 Msa0272990:CDS 45.0%
TCCTTAACTTCAATTCCCCC+AGG - chr2_3:4586940-4586959 None:intergenic 45.0%
GCTCTTAGTGCAAAGACAGA+AGG + chr2_3:4586976-4586995 Msa0272990:CDS 45.0%
CTAATACCAGGTGCATTCCA+CGG - chr2_3:4587051-4587070 None:intergenic 45.0%
TTCTTGAGGGGGAGACTATT+AGG + chr2_3:4587174-4587193 Msa0272990:CDS 45.0%
TCTTGAGGGGGAGACTATTA+GGG + chr2_3:4587175-4587194 Msa0272990:CDS 45.0%
!! TCTCGAAGAGCATTTGAGAG+TGG + chr2_3:4587218-4587237 Msa0272990:CDS 45.0%
! CGTTGCCTGATTATAATGGG+CGG + chr2_3:4587258-4587277 Msa0272990:CDS 45.0%
!! GTTGCCTGATTATAATGGGC+GGG + chr2_3:4587259-4587278 Msa0272990:CDS 45.0%
!! TTGCCTGATTATAATGGGCG+GGG + chr2_3:4587260-4587279 Msa0272990:CDS 45.0%
GCTGAAGAGATCCTACTACA+TGG + chr2_3:4587325-4587344 Msa0272990:CDS 45.0%
TGGTTGTGGATCCATGTAGT+AGG - chr2_3:4587339-4587358 None:intergenic 45.0%
TGCATGTGCGTTATATCGGT+TGG + chr2_3:4587409-4587428 Msa0272990:CDS 45.0%
TTAATGGGAAGAAGAGCTCC+AGG + chr2_3:4587444-4587463 Msa0272990:CDS 45.0%
CTAAACCTCAAGTCCTGCCT+AGG - chr2_3:4585555-4585574 None:intergenic 50.0%
TTCACCAGATGCTTCGTGAG+TGG + chr2_3:4585729-4585748 Msa0272990:CDS 50.0%
AGGAGAAGGCTCATTGAGCT+CGG - chr2_3:4585759-4585778 None:intergenic 50.0%
TCCTGCTTCTTCTTTGCAGC+AGG + chr2_3:4585775-4585794 Msa0272990:CDS 50.0%
ACCTGCTGCAAAGAAGAAGC+AGG - chr2_3:4585779-4585798 None:intergenic 50.0%
!! AGGCACAGCTAATGGACTAG+TGG - chr2_3:4586007-4586026 None:intergenic 50.0%
! TAGAGGCACAGGCTTTAGTG+AGG + chr2_3:4586717-4586736 Msa0272990:CDS 50.0%
AGGGCAGATGCTTGGTAGAT+AGG - chr2_3:4586767-4586786 None:intergenic 50.0%
ACACAAGTTCAACCCTTCCG+CGG - chr2_3:4586842-4586861 None:intergenic 50.0%
CATCCCCGCCCATTATAATC+AGG - chr2_3:4587266-4587285 None:intergenic 50.0%
!! CTGATTATAATGGGCGGGGA+TGG + chr2_3:4587264-4587283 Msa0272990:CDS 50.0%
CAGAGCCAAACCTAATGCCA+AGG + chr2_3:4587562-4587581 Msa0272990:CDS 50.0%
GTCAGCCTTGGCATTAGGTT+TGG - chr2_3:4587570-4587589 None:intergenic 50.0%
ACCTAATGCCAAGGCTGACA+TGG + chr2_3:4587571-4587590 Msa0272990:CDS 50.0%
CCTAATGCCAAGGCTGACAT+GGG + chr2_3:4587572-4587591 Msa0272990:CDS 50.0%
! GGTGAGTTTAGGGCTTCCCT+AGG + chr2_3:4585535-4585554 Msa0272990:five_prime_UTR 55.0%
! AGTTTAGGGCTTCCCTAGGC+AGG + chr2_3:4585539-4585558 Msa0272990:five_prime_UTR 55.0%
TAGGAAGGAGAGCCGTAGTG+TGG + chr2_3:4585682-4585701 Msa0272990:CDS 55.0%
GAAGCGCGACATCCACACTA+CGG - chr2_3:4585697-4585716 None:intergenic 55.0%
TGTGGATGTCGCGCTTCTTG+AGG + chr2_3:4585700-4585719 Msa0272990:CDS 55.0%
! CCTTCCACTCACGAAGCATC+TGG - chr2_3:4585736-4585755 None:intergenic 55.0%
CCAGATGCTTCGTGAGTGGA+AGG + chr2_3:4585733-4585752 Msa0272990:CDS 55.0%
GCTACTGCAGCTCTGTGAAG+AGG + chr2_3:4585972-4585991 Msa0272990:CDS 55.0%
! GGCACAGGCTTTAGTGAGGA+TGG + chr2_3:4586721-4586740 Msa0272990:CDS 55.0%
CTAGGAAAGCGGAAGGAGGA+GGG - chr2_3:4586786-4586805 None:intergenic 55.0%
GAACCTAGGAAAGCGGAAGG+AGG - chr2_3:4586790-4586809 None:intergenic 55.0%
TTGGGACTGTTCAAGACCCG+CGG + chr2_3:4586822-4586841 Msa0272990:CDS 55.0%
ACTGTTCAAGACCCGCGGAA+GGG + chr2_3:4586827-4586846 Msa0272990:CDS 55.0%
CACAAGTTCAACCCTTCCGC+GGG - chr2_3:4586841-4586860 None:intergenic 55.0%
ATAGCCCCAGTTCTACGACC+TGG + chr2_3:4586919-4586938 Msa0272990:CDS 55.0%
TAGCCCCAGTTCTACGACCT+GGG + chr2_3:4586920-4586939 Msa0272990:CDS 55.0%
TTCCCCCAGGTCGTAGAACT+GGG - chr2_3:4586927-4586946 None:intergenic 55.0%
ATTCCCCCAGGTCGTAGAAC+TGG - chr2_3:4586928-4586947 None:intergenic 55.0%
AAGTCTCCGTGGAATGCACC+TGG + chr2_3:4587042-4587061 Msa0272990:CDS 55.0%
AGGGGGAGACTATTAGGGAG+TGG + chr2_3:4587180-4587199 Msa0272990:CDS 55.0%
CCCATGTCAGCCTTGGCATT+AGG - chr2_3:4587575-4587594 None:intergenic 55.0%
AATGCCAAGGCTGACATGGG+TGG + chr2_3:4587575-4587594 Msa0272990:CDS 55.0%
AACACCACCCATGTCAGCCT+TGG - chr2_3:4587582-4587601 None:intergenic 55.0%
GGTGAGCAAGATGCTGCGTT+AGG + chr2_3:4587690-4587709 Msa0272990:three_prime_UTR 55.0%
GCTTCCCTAGGCAGGACTTG+AGG + chr2_3:4585547-4585566 Msa0272990:five_prime_UTR 60.0%
GAAGGAGGAGGGCAGATGCT+TGG - chr2_3:4586775-4586794 None:intergenic 60.0%
CCTAGGAAAGCGGAAGGAGG+AGG - chr2_3:4586787-4586806 None:intergenic 60.0%
CCTCCTCCTTCCGCTTTCCT+AGG + chr2_3:4586784-4586803 Msa0272990:CDS 60.0%
GACTGTTCAAGACCCGCGGA+AGG + chr2_3:4586826-4586845 Msa0272990:CDS 60.0%
CGTAGAACTGGGGCTATGCC+TGG - chr2_3:4586916-4586935 None:intergenic 60.0%
AGCCCCAGTTCTACGACCTG+GGG + chr2_3:4586921-4586940 Msa0272990:CDS 60.0%
TCCCCCAGGTCGTAGAACTG+GGG - chr2_3:4586926-4586945 None:intergenic 60.0%
TGTCGGCATCCCAGAATGCG+AGG + chr2_3:4587005-4587024 Msa0272990:CDS 60.0%
GTCGGCATCCCAGAATGCGA+GGG + chr2_3:4587006-4587025 Msa0272990:CDS 60.0%
CATCCCAGAATGCGAGGGAG+CGG + chr2_3:4587011-4587030 Msa0272990:CDS 60.0%
TTGCCGCTCCCTCGCATTCT+GGG - chr2_3:4587017-4587036 None:intergenic 60.0%
CGGCAACTGCAAAGTCTCCG+TGG + chr2_3:4587031-4587050 Msa0272990:CDS 60.0%
GCCCCAGTTCTACGACCTGG+GGG + chr2_3:4586922-4586941 Msa0272990:CDS 65.0%
GTTGCCGCTCCCTCGCATTC+TGG - chr2_3:4587018-4587037 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 4584975 4588044 4584975 ID=Msa0272990;Name=Msa0272990
chr2_3 mRNA 4584975 4588044 4584975 ID=Msa0272990-mRNA-1;Parent=Msa0272990;Name=Msa0272990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=446|1|1|1|0.75|0.6|5|374|465
chr2_3 exon 4584975 4585358 4584975 ID=Msa0272990-mRNA-1:exon:2238;Parent=Msa0272990-mRNA-1
chr2_3 exon 4585513 4585796 4585513 ID=Msa0272990-mRNA-1:exon:2239;Parent=Msa0272990-mRNA-1
chr2_3 exon 4585934 4586083 4585934 ID=Msa0272990-mRNA-1:exon:2240;Parent=Msa0272990-mRNA-1
chr2_3 exon 4586553 4587063 4586553 ID=Msa0272990-mRNA-1:exon:2241;Parent=Msa0272990-mRNA-1
chr2_3 exon 4587156 4588044 4587156 ID=Msa0272990-mRNA-1:exon:2242;Parent=Msa0272990-mRNA-1
chr2_3 five_prime_UTR 4584975 4585358 4584975 ID=Msa0272990-mRNA-1:five_prime_utr;Parent=Msa0272990-mRNA-1
chr2_3 five_prime_UTR 4585513 4585574 4585513 ID=Msa0272990-mRNA-1:five_prime_utr;Parent=Msa0272990-mRNA-1
chr2_3 CDS 4585575 4585796 4585575 ID=Msa0272990-mRNA-1:cds;Parent=Msa0272990-mRNA-1
chr2_3 CDS 4585934 4586083 4585934 ID=Msa0272990-mRNA-1:cds;Parent=Msa0272990-mRNA-1
chr2_3 CDS 4586553 4587063 4586553 ID=Msa0272990-mRNA-1:cds;Parent=Msa0272990-mRNA-1
chr2_3 CDS 4587156 4587670 4587156 ID=Msa0272990-mRNA-1:cds;Parent=Msa0272990-mRNA-1
chr2_3 three_prime_UTR 4587671 4588044 4587671 ID=Msa0272990-mRNA-1:three_prime_utr;Parent=Msa0272990-mRNA-1
Gene Sequence

>Msa0272990

ATGATTTCCAAGGGTAGCTGTAAGAAAGCATCACACAGGCTTATCAAGGACAAGGCAAAGAACCATGTAGATGATCTGCATGTGATGTTCCTTGATCTGCAGTTTGCTAGGAAGGAGAGCCGTAGTGTGGATGTCGCGCTTCTTGAGGAGCAAGTTCACCAGATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAGGGTGGCAGTCTTCGATCATTCTCGACCGATATATGTAGGCTACTGCAGCTCTGTGAAGAGGAAGATGATGCCACTAGTCCATTAGCTGTGCCTAAGCATGAACCTAATGATCAGAATATGCAGACTGAAGCTAAGATGACGTTTCAAGAAAGCCAACATCAGCATGATTCCCTATTAATGGATGAGTACATACACTCCATCTTAGGAGCTCCCAGTAAATCAACTAACAACTCGGATAGGCGGCCTAATTTTGAATCAAAATGTCGTCAATTTGATTTAAATGAAGATTTTAATCACAACTGTTATAGTGCTTTTAGAGGCACAGGCTTTAGTGAGGATGGTGTTGTTCCTTATATACCTACCTATCTACCAAGCATCTGCCCTCCTCCTTCCGCTTTCCTAGGTTCAAAATGTGCACTTTGGGACTGTTCAAGACCCGCGGAAGGGTTGAACTTGTGTCAAGACTATTGCAGTAGTTTTCATGCTGCTCTTGCTTTAAATGAAGGACAACCAGGCATAGCCCCAGTTCTACGACCTGGGGGAATTGAAGTTAAGGATAATTTACTGTTGGCTGCTCTTAGTGCAAAGACAGAAGGAAAAGATGTCGGCATCCCAGAATGCGAGGGAGCGGCAACTGCAAAGTCTCCGTGGAATGCACCTGAGCTCTTTGATCTTTTTGTTCTTGAGGGGGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGTCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCGTTGCCTGATTATAATGGGCGGGGATGGCATGAATCCAGAAAGCAAGTGATGAAAGAGTTTGGAGGGCTGAAGAGATCCTACTACATGGATCCACAACCACTAAACCATTTTGAGTGGCATCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCGTTATATCGGTTGGAACTAAAGCTCGTTAATGGGAAGAAGAGCTCCAGGACAAAGATAACAAATGATTCAGTTACTGATCTTCAGAAGCGGATAAGAAGACTCTCTGCCGAGTTTCCCTATGATAACAGACATTCTGCTAAGGGCAGAGCCAAACCTAATGCCAAGGCTGACATGGGTGGTGTTTATACAGCTTCAAACAATGCACCATCACCATATGACTATCTTGTTGAGAGCACAATCGCTATTATGTGA

Protein sequence

>Msa0272990

MISKGSCKKASHRLIKDKAKNHVDDLHVMFLDLQFARKESRSVDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLRSFSTDICRLLQLCEEEDDATSPLAVPKHEPNDQNMQTEAKMTFQESQHQHDSLLMDEYIHSILGAPSKSTNNSDRRPNFESKCRQFDLNEDFNHNCYSAFRGTGFSEDGVVPYIPTYLPSICPPPSAFLGSKCALWDCSRPAEGLNLCQDYCSSFHAALALNEGQPGIAPVLRPGGIEVKDNLLLAALSAKTEGKDVGIPECEGAATAKSPWNAPELFDLFVLEGETIREWLFFDKSRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVNGKKSSRTKITNDSVTDLQKRIRRLSAEFPYDNRHSAKGRAKPNAKADMGGVYTASNNAPSPYDYLVESTIAIM*