AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185180 MtrunA17_Chr4g0046291 73.617 470 109 3 3 461 5 470 0.0 711
Msa0185180 MtrunA17_Chr4g0040681 45.817 502 195 10 3 437 6 497 2.50e-137 404
Msa0185180 MtrunA17_Chr2g0283011 97.222 72 1 1 1 71 1 72 5.03e-41 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185180 AT1G28520.4 64.592 466 140 6 3 450 6 464 0.0 589
Msa0185180 AT1G28520.1 64.592 466 140 6 3 450 6 464 0.0 589
Msa0185180 AT1G28520.2 64.592 466 140 6 3 450 6 464 0.0 589
Msa0185180 AT1G28520.5 64.592 466 140 6 3 450 6 464 0.0 589
Msa0185180 AT1G28520.3 61.803 466 137 7 3 450 6 448 0.0 551
Msa0185180 AT2G42400.1 48.864 440 178 10 10 416 9 434 2.73e-124 369

Find 156 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCATCACTTGCTTTC+TGG -0.000768 1_4:+75281137 None:intergenic
GTTGCCGCTCCCTCGCATTC+TGG 0.120554 1_4:+75281416 None:intergenic
TAAATGTTTCAAATCCTTTA+TGG 0.122436 1_4:-75280489 Msa0185180:three_prime_UTR
TTCTCTCTAAATTGTGTCTT+TGG 0.178535 1_4:-75283421 Msa0185180:five_prime_UTR
GTATGTACTCATCCATTAAT+AGG 0.244748 1_4:+75281858 None:intergenic
TTGGAACTAAAGCTCGTTAA+TGG 0.245316 1_4:-75281003 Msa0185180:CDS
TCAGCATGATTCCCTATTAA+TGG 0.250839 1_4:-75281870 Msa0185180:CDS
CGGTTAAATAGGTGAGTTTA+GGG 0.264616 1_4:-75282907 Msa0185180:five_prime_UTR
CATAAAGATGCCACTCAAAA+TGG 0.277276 1_4:+75281067 None:intergenic
TAACTTTCATTATCATGATT+TGG 0.277336 1_4:+75280595 None:intergenic
CAAGTTGTTAGTTGATTTAC+TGG 0.287523 1_4:+75281817 None:intergenic
CAGAAAATGCAAACAGCTTC+AGG 0.298139 1_4:+75283161 None:intergenic
ATGGATGTTTCCTTATCTAT+TGG 0.300796 1_4:-75280443 Msa0185180:three_prime_UTR
AAATGTTTCAAATCCTTTAT+GGG 0.306340 1_4:-75280488 Msa0185180:three_prime_UTR
TCGGTTAAATAGGTGAGTTT+AGG 0.307286 1_4:-75282908 Msa0185180:five_prime_UTR
TTGCCGCTCCCTCGCATTCT+GGG 0.309111 1_4:+75281417 None:intergenic
AGGTCGTTGCCTGATTATAA+TGG 0.319828 1_4:-75281177 Msa0185180:CDS
AATGAACACATATATGCTTA+TGG 0.322004 1_4:+75283446 None:intergenic
GGTAGATAGGTAGGTATATA+AGG 0.325810 1_4:+75281680 None:intergenic
GTCAGCCTTGGCATTAGGTT+TGG 0.334729 1_4:+75280864 None:intergenic
GTCTGCATATTCTGATCATT+AGG 0.347297 1_4:+75282396 None:intergenic
GAGTACATACACTCCATCTT+AGG 0.353453 1_4:-75281845 Msa0185180:CDS
TCACTCTCTATGGCCATGTT+TGG 0.354762 1_4:-75283137 Msa0185180:five_prime_UTR
AACACTATGCTCATGACTTT+CGG 0.358344 1_4:-75283395 Msa0185180:five_prime_UTR
GGACTGAAACTCGGTTAAAT+AGG 0.360190 1_4:-75282918 Msa0185180:five_prime_UTR
CCCATGTCAGCCTTGGCATT+AGG 0.366697 1_4:+75280859 None:intergenic
AGGGCAGATGCTTGGTAGAT+AGG 0.368518 1_4:+75281667 None:intergenic
AAGCAAGTGATGAAAGAGTT+TGG 0.371141 1_4:-75281132 Msa0185180:CDS
TCCTGCTTCTTCTTTGCAGC+AGG 0.376005 1_4:-75282657 Msa0185180:intron
AACAACAAATTGAAACAATA+AGG 0.380267 1_4:+75283335 None:intergenic
ATCATTTGTTATCTTTGTCC+TGG 0.382306 1_4:+75280969 None:intergenic
AGCAGAATGTCTGTTATCAT+AGG 0.386907 1_4:+75280897 None:intergenic
TTTGTATAAGTTTCCCATAA+AGG 0.389773 1_4:+75280475 None:intergenic
AGGTTCAAAATGTGCACTTT+GGG 0.394325 1_4:-75281627 Msa0185180:CDS
TGCTTATGAAAGTAGATAAT+AGG 0.397927 1_4:+75283099 None:intergenic
CCTCCTCCTTCCGCTTTCCT+AGG 0.410735 1_4:-75281647 Msa0185180:CDS
GCTTCAGGATAAGTTTATAA+TGG 0.418715 1_4:+75283176 None:intergenic
CGACATTTCATATTCGCAAT+GGG 0.429339 1_4:-75280682 Msa0185180:three_prime_UTR
TGCCACTCAAAATGGTTTAG+TGG 0.430399 1_4:+75281075 None:intergenic
TCAAAATGGTTTAGTGGTTG+TGG 0.432899 1_4:+75281081 None:intergenic
CCTTCCACTCACGAAGCATC+TGG 0.436154 1_4:+75282699 None:intergenic
TCATGCTTAGGCACAGCTAA+TGG 0.436229 1_4:+75282420 None:intergenic
TAGGTTCAAAATGTGCACTT+TGG 0.438695 1_4:-75281628 Msa0185180:CDS
CTTTCTAGTGTACATAGTAT+TGG 0.442899 1_4:-75280520 Msa0185180:three_prime_UTR
CTGCAGTAGCCTACATATAT+CGG 0.447566 1_4:+75282473 None:intergenic
GGTCGTTGCCTGATTATAAT+GGG 0.452127 1_4:-75281176 Msa0185180:CDS
TATGTACTCATCCATTAATA+GGG 0.456560 1_4:+75281859 None:intergenic
TGGAACTAAAGCTCGTTAAT+GGG 0.459138 1_4:-75281002 Msa0185180:CDS
AGTTTAGGGCTTCCCTAGGC+AGG 0.460315 1_4:-75282893 Msa0185180:five_prime_UTR
GCTGCTCTTGCTTTAAATGA+AGG 0.460368 1_4:-75281545 Msa0185180:CDS
GATGTTTCCTTATCTATTGG+AGG 0.462114 1_4:-75280440 Msa0185180:three_prime_UTR
CATCCCCGCCCATTATAATC+AGG 0.465616 1_4:+75281168 None:intergenic
TGATCATTAGGTTCATGCTT+AGG 0.466635 1_4:+75282408 None:intergenic
TAGCCCCAGTTCTACGACCT+GGG 0.466781 1_4:-75281511 Msa0185180:CDS
TGCTTTCTTACAGCTACCCT+TGG 0.466878 1_4:+75282850 None:intergenic
GTGATGCATGTGTGTTATAT+CGG 0.471671 1_4:-75281026 Msa0185180:CDS
CAGTAAATCAACTAACAACT+TGG 0.474754 1_4:-75281816 Msa0185180:CDS
ACCTAATGCCAAGGCTGACA+TGG 0.476238 1_4:-75280860 Msa0185180:CDS
CACATATATGCTTATGGAAG+CGG 0.482953 1_4:+75283452 None:intergenic
CGTAGAACTGGGGCTATGCC+TGG 0.483033 1_4:+75281518 None:intergenic
TTTCTCTGTGATGGTGATGT+TGG 0.485020 1_4:-75283267 Msa0185180:five_prime_UTR
TCCTAGAAAACTGCAGATCA+AGG 0.487510 1_4:+75282768 None:intergenic
TGAAATGTCGTATCAGCAAG+TGG 0.490550 1_4:+75280695 None:intergenic
AAGTTATTAACATTATTTGA+AGG 0.492304 1_4:-75280578 Msa0185180:three_prime_UTR
CTGATTATAATGGGCGGGGA+TGG 0.493655 1_4:-75281167 Msa0185180:CDS
CTAAACCTCAAGTCCTGCCT+AGG 0.497959 1_4:+75282880 None:intergenic
CTTATACAAAACTCAAAAGA+TGG 0.498859 1_4:-75280462 Msa0185180:three_prime_UTR
GGTGAGCAAGATGCTGCGTT+AGG 0.501565 1_4:-75280741 Msa0185180:three_prime_UTR
GTTGCCTGATTATAATGGGC+GGG 0.508969 1_4:-75281172 Msa0185180:CDS
TGGTTGTGGATCCATGTAGT+AGG 0.510429 1_4:+75281095 None:intergenic
CATCCCAGAATGCGAGGGAG+CGG 0.511232 1_4:-75281420 Msa0185180:CDS
TATACTGCTTTCAGAGGCAC+AGG 0.514147 1_4:-75281725 Msa0185180:CDS
TTTACTGGGAGCTCCTAAGA+TGG 0.517698 1_4:+75281832 None:intergenic
AACACCACCCATGTCAGCCT+TGG 0.521369 1_4:+75280852 None:intergenic
CCTAGGAAAGCGGAAGGAGG+AGG 0.522377 1_4:+75281647 None:intergenic
GAAGGAGGAGGGCAGATGCT+TGG 0.522630 1_4:+75281659 None:intergenic
CTCTCAACAAGATAGTCATA+TGG 0.523925 1_4:+75280802 None:intergenic
TGTGGATGTCGCGCTTCTTG+AGG 0.525115 1_4:-75282732 Msa0185180:CDS
AGCATCACACAGGCTTATCA+AGG 0.532332 1_4:-75282831 Msa0185180:CDS
CACAAGTTCAACCCTTCCGC+GGG 0.534065 1_4:+75281593 None:intergenic
ACATATATGCTTATGGAAGC+GGG 0.539979 1_4:+75283453 None:intergenic
CCAGATGCTTCGTGAGTGGA+AGG 0.543218 1_4:-75282699 Msa0185180:CDS
TGATAACAGACATTCTGCTA+AGG 0.543724 1_4:-75280893 Msa0185180:CDS
GATTTGGAAAATAAAGACTC+AGG 0.545368 1_4:+75280611 None:intergenic
GGCACAGGCTTTAGTGAGGA+TGG 0.545649 1_4:-75281710 Msa0185180:CDS
GCTTCCCTAGGCAGGACTTG+AGG 0.546972 1_4:-75282885 Msa0185180:five_prime_UTR
ACCTGCTGCAAAGAAGAAGC+AGG 0.547011 1_4:+75282656 None:intergenic
CATTCTCGACCGATATATGT+AGG 0.550090 1_4:-75282482 Msa0185180:CDS
CAGATGCTTGGTAGATAGGT+AGG 0.551289 1_4:+75281671 None:intergenic
GCTTTAAATGAAGGACAACC+AGG 0.554170 1_4:-75281536 Msa0185180:CDS
GCAGAATGTCTGTTATCATA+GGG 0.554543 1_4:+75280898 None:intergenic
AGTTAAGGATAATTTACTGT+TGG 0.554729 1_4:-75281480 Msa0185180:CDS
AATCAACTAACAACTTGGAT+AGG 0.556218 1_4:-75281811 Msa0185180:CDS
ATAGCCCCAGTTCTACGACC+TGG 0.557433 1_4:-75281512 Msa0185180:CDS
TGAGGTTTAGATGATTTCCA+AGG 0.559690 1_4:-75282867 Msa0185180:exon
ATAGGGAATCATGCTGATGT+TGG 0.560720 1_4:+75281876 None:intergenic
TTAATGGGAAGAAGAGCTCC+AGG 0.561240 1_4:-75280987 Msa0185180:CDS
ACGACATTTCATATTCGCAA+TGG 0.561626 1_4:-75280683 Msa0185180:three_prime_UTR
TTTCGCAGTGGACTGAAACT+CGG 0.562497 1_4:-75282927 Msa0185180:intron
ACACAAGTTCAACCCTTCCG+CGG 0.569071 1_4:+75281592 None:intergenic
TGCAAAGAAGAAGCAGGAGA+AGG 0.571409 1_4:+75282662 None:intergenic
AAGTCTCCGTGGAATGCACC+TGG 0.578340 1_4:-75281389 Msa0185180:intron
CTAGGAAAGCGGAAGGAGGA+GGG 0.578498 1_4:+75281648 None:intergenic
TGCATGTGTGTTATATCGGT+TGG 0.581993 1_4:-75281022 Msa0185180:CDS
TTGCCTGATTATAATGGGCG+GGG 0.584990 1_4:-75281171 Msa0185180:CDS
AAGTGATGAAAGAGTTTGGA+GGG 0.587404 1_4:-75281128 Msa0185180:CDS
GACTGTTCAAGACCCGCGGA+AGG 0.587498 1_4:-75281605 Msa0185180:CDS
GCTCTTAGTGCAAAGACAGA+AGG 0.588265 1_4:-75281455 Msa0185180:CDS
GATAACAGACATTCTGCTAA+GGG 0.588460 1_4:-75280892 Msa0185180:CDS
ACAAGATAGTCATATGGTGA+TGG 0.593941 1_4:+75280808 None:intergenic
GGTGAGTTTAGGGCTTCCCT+AGG 0.595165 1_4:-75282897 Msa0185180:five_prime_UTR
CAGTTACTGATCTTCAGAAG+CGG 0.596139 1_4:-75280945 Msa0185180:CDS
TTCACCAGATGCTTCGTGAG+TGG 0.596799 1_4:-75282703 Msa0185180:CDS
TAGGAAGGAGAGCCGTAGTG+TGG 0.606182 1_4:-75282750 Msa0185180:CDS
AACTGTTATACTGCTTTCAG+AGG 0.607971 1_4:-75281731 Msa0185180:CDS
CAGAGCCAAACCTAATGCCA+AGG 0.608334 1_4:-75280869 Msa0185180:CDS
AGGAGAAGGCTCATTGAGCT+CGG 0.609324 1_4:+75282676 None:intergenic
AGCCCCAGTTCTACGACCTG+GGG 0.611570 1_4:-75281510 Msa0185180:CDS
CCTAATGCCAAGGCTGACAT+GGG 0.613097 1_4:-75280859 Msa0185180:CDS
CAAATAAGTCAATCCAAACA+TGG 0.613289 1_4:+75283124 None:intergenic
CTAATACCAGGTGCATTCCA+CGG 0.614138 1_4:+75281383 None:intergenic
TGTCGGCATCCCAGAATGCG+AGG 0.614404 1_4:-75281426 Msa0185180:CDS
AAGTTGTTAGTTGATTTACT+GGG 0.616145 1_4:+75281818 None:intergenic
GCTACTGCAGCTCTGTGAAG+AGG 0.620067 1_4:-75282460 Msa0185180:CDS
AAGACAGAAGGAAAAGATGT+CGG 0.620071 1_4:-75281443 Msa0185180:CDS
GAGGTTTAGATGATTTCCAA+GGG 0.620877 1_4:-75282866 Msa0185180:exon
CAGAGGCACAGGCTTTAGTG+AGG 0.620913 1_4:-75281714 Msa0185180:CDS
ACTATGCTCATGACTTTCGG+TGG 0.623859 1_4:-75283392 Msa0185180:five_prime_UTR
TTGATCAAAAGCATATTCCA+AGG 0.625578 1_4:+75283202 None:intergenic
TAAACCTCAAGTCCTGCCTA+GGG 0.625924 1_4:+75282881 None:intergenic
AGGCACAGCTAATGGACTAG+TGG 0.628612 1_4:+75282428 None:intergenic
CGTTGCCTGATTATAATGGG+CGG 0.632470 1_4:-75281173 Msa0185180:CDS
TTTGAACCTAGGAAAGCGGA+AGG 0.634334 1_4:+75281641 None:intergenic
GCTGAAGAGATCCTACTACA+TGG 0.634906 1_4:-75281106 Msa0185180:CDS
TCTCGAAGAGCATTTGAGAG+TGG 0.636901 1_4:-75281213 Msa0185180:CDS
GAAATGTCGTATCAGCAAGT+GGG 0.637231 1_4:+75280696 None:intergenic
ACTGTTCAAGACCCGCGGAA+GGG 0.637959 1_4:-75281604 Msa0185180:CDS
CAACTAACAACTTGGATAGG+CGG 0.639385 1_4:-75281808 Msa0185180:CDS
ATTTGGAAAATAAAGACTCA+GGG 0.640291 1_4:+75280612 None:intergenic
TTGGGACTGTTCAAGACCCG+CGG 0.641938 1_4:-75281609 Msa0185180:CDS
GAAGCGCGACATCCACACTA+CGG 0.643778 1_4:+75282738 None:intergenic
TCACATGCAGATCATCTACA+TGG 0.644881 1_4:+75282795 None:intergenic
GAACCTAGGAAAGCGGAAGG+AGG 0.646171 1_4:+75281644 None:intergenic
TCTGTTATCATAGGGAAACT+CGG 0.647001 1_4:+75280906 None:intergenic
CGGCAACTGCAAAGTCTCCG+TGG 0.652685 1_4:-75281400 Msa0185180:CDS
GTCGGCATCCCAGAATGCGA+GGG 0.657248 1_4:-75281425 Msa0185180:CDS
CAAGTGATGAAAGAGTTTGG+AGG 0.680936 1_4:-75281129 Msa0185180:CDS
TGATGTGATTGATCTCGAAG+TGG 0.682880 1_4:-75280763 Msa0185180:three_prime_UTR
GCTGTAAGAAAGCATCACAC+AGG 0.691286 1_4:-75282841 Msa0185180:CDS
ACACAGGCTTATCAAGGACA+AGG 0.694542 1_4:-75282825 Msa0185180:CDS
GACATTTCATATTCGCAATG+GGG 0.702113 1_4:-75280681 Msa0185180:three_prime_UTR
GATGTGATTGATCTCGAAGT+GGG 0.707108 1_4:-75280762 Msa0185180:three_prime_UTR
TGGAAAATAAAGACTCAGGG+CGG 0.716558 1_4:+75280615 None:intergenic
AGAGTGGAAACAGAAAGCAA+AGG 0.717117 1_4:-75281197 Msa0185180:CDS
GCCCCAGTTCTACGACCTGG+GGG 0.725582 1_4:-75281509 Msa0185180:CDS
AATGCCAAGGCTGACATGGG+TGG 0.739584 1_4:-75280856 Msa0185180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTTTTTAGAGAAA+AGG + chr1_4:75281765-75281784 None:intergenic 10.0%
!!! TTTAAAATTTCACAACTTTT+AGG - chr1_4:75280631-75280650 Msa0185180:three_prime_UTR 15.0%
!!! TTAAAATTTCACAACTTTTA+GGG - chr1_4:75280632-75280651 Msa0185180:three_prime_UTR 15.0%
!!! TTTTATTTTTTCTGTAGTAT+TGG - chr1_4:75281586-75281605 Msa0185180:CDS 15.0%
!! AAACACATAAATAGTTTAAT+AGG + chr1_4:75282529-75282548 None:intergenic 15.0%
!! AAGTTATTAACATTATTTGA+AGG - chr1_4:75283288-75283307 Msa0185180:five_prime_UTR 15.0%
!! AAGGAAAAAAAAATAACTAG+AGG + chr1_4:75280515-75280534 None:intergenic 20.0%
!! AACAACAAATTGAAACAATA+AGG + chr1_4:75280534-75280553 None:intergenic 20.0%
!! AAATCTGCATATTAAAGTTA+AGG + chr1_4:75281253-75281272 None:intergenic 20.0%
!! TTAATATGCAGATTTAATTG+TGG - chr1_4:75281258-75281277 Msa0185180:CDS 20.0%
!! TTAATTCATATACTAGAGTA+AGG - chr1_4:75281656-75281675 Msa0185180:CDS 20.0%
!! TAATTCATATACTAGAGTAA+GGG - chr1_4:75281657-75281676 Msa0185180:CDS 20.0%
!!! GTTGTATTGTTTTTTATATG+TGG - chr1_4:75281736-75281755 Msa0185180:CDS 20.0%
!!! TTATTTTCAATTGACAGAAA+TGG - chr1_4:75281792-75281811 Msa0185180:CDS 20.0%
!! TAACTTTCATTATCATGATT+TGG + chr1_4:75283274-75283293 None:intergenic 20.0%
!! TAAATGTTTCAAATCCTTTA+TGG - chr1_4:75283377-75283396 Msa0185180:five_prime_UTR 20.0%
!! AAATGTTTCAAATCCTTTAT+GGG - chr1_4:75283378-75283397 Msa0185180:five_prime_UTR 20.0%
! AATGAACACATATATGCTTA+TGG + chr1_4:75280423-75280442 None:intergenic 25.0%
!! AAAAAAATAACTAGAGGCAT+TGG + chr1_4:75280509-75280528 None:intergenic 25.0%
! CACAGAGAAAAAAAAAATGA+GGG + chr1_4:75280589-75280608 None:intergenic 25.0%
! TCACAGAGAAAAAAAAAATG+AGG + chr1_4:75280590-75280609 None:intergenic 25.0%
!!! CATTTTTTTTTTCTCTGTGA+TGG - chr1_4:75280590-75280609 Msa0185180:three_prime_UTR 25.0%
! TGCTTATGAAAGTAGATAAT+AGG + chr1_4:75280770-75280789 None:intergenic 25.0%
! ATTTAATTGTGGATTTGTGA+TGG - chr1_4:75281269-75281288 Msa0185180:CDS 25.0%
! GAGAAAATTGGTATTAACTA+AGG + chr1_4:75281846-75281865 None:intergenic 25.0%
! ATGATGCATAAGAACAAATT+GGG + chr1_4:75281884-75281903 None:intergenic 25.0%
! TATGATGCATAAGAACAAAT+TGG + chr1_4:75281885-75281904 None:intergenic 25.0%
! TATGATTGTAACAAGTTTCT+TGG - chr1_4:75281949-75281968 Msa0185180:intron 25.0%
! TATGTACTCATCCATTAATA+GGG + chr1_4:75282010-75282029 None:intergenic 25.0%
!! AAGTTGTTAGTTGATTTACT+GGG + chr1_4:75282051-75282070 None:intergenic 25.0%
!!! CGACATTTTGATTCAAAATT+AGG + chr1_4:75282084-75282103 None:intergenic 25.0%
! AGTTAAGGATAATTTACTGT+TGG - chr1_4:75282386-75282405 Msa0185180:CDS 25.0%
! ATTTGGAAAATAAAGACTCA+GGG + chr1_4:75283257-75283276 None:intergenic 25.0%
! TTTGTATAAGTTTCCCATAA+AGG + chr1_4:75283394-75283413 None:intergenic 25.0%
! CTTATACAAAACTCAAAAGA+TGG - chr1_4:75283404-75283423 Msa0185180:five_prime_UTR 25.0%
!!! TTTTTTACCTCCAATAGATA+AGG + chr1_4:75283436-75283455 None:intergenic 25.0%
! GGAGGTAAAAAAAATTGTAA+AGG - chr1_4:75283444-75283463 Msa0185180:five_prime_UTR 25.0%
TTCTCTCTAAATTGTGTCTT+TGG - chr1_4:75280445-75280464 Msa0185180:three_prime_UTR 30.0%
GAGAAAAAAAAAATGAGGGT+AGG + chr1_4:75280585-75280604 None:intergenic 30.0%
!! AAATTTCACAACTTTTAGGG+TGG - chr1_4:75280635-75280654 Msa0185180:three_prime_UTR 30.0%
! TTGATCAAAAGCATATTCCA+AGG + chr1_4:75280667-75280686 None:intergenic 30.0%
GCTTCAGGATAAGTTTATAA+TGG + chr1_4:75280693-75280712 None:intergenic 30.0%
CAAATAAGTCAATCCAAACA+TGG + chr1_4:75280745-75280764 None:intergenic 30.0%
CTTGTAAGACTATTTAGAAG+TGG - chr1_4:75280790-75280809 Msa0185180:CDS 30.0%
AATAAGCTGAAAACAGCTTA+TGG + chr1_4:75280834-75280853 None:intergenic 30.0%
AACTTGAATGGCAATATTTG+TGG - chr1_4:75281301-75281320 Msa0185180:intron 30.0%
! ATTTGAGTTTGCCATGTTTA+TGG - chr1_4:75281335-75281354 Msa0185180:intron 30.0%
! TTTGAGTTTGCCATGTTTAT+GGG - chr1_4:75281336-75281355 Msa0185180:intron 30.0%
CTTTGTGATTTGATCATAAC+TGG - chr1_4:75281556-75281575 Msa0185180:CDS 30.0%
GTATGTACTCATCCATTAAT+AGG + chr1_4:75282011-75282030 None:intergenic 30.0%
! CAAGTTGTTAGTTGATTTAC+TGG + chr1_4:75282052-75282071 None:intergenic 30.0%
CAGTAAATCAACTAACAACT+TGG - chr1_4:75282050-75282069 Msa0185180:intron 30.0%
AATCAACTAACAACTTGGAT+AGG - chr1_4:75282055-75282074 Msa0185180:intron 30.0%
! TTTGATCTTTTTGTTCTCGA+GGG - chr1_4:75282596-75282615 Msa0185180:intron 30.0%
!! ATCATTTGTTATCTTTGTCC+TGG + chr1_4:75282900-75282919 None:intergenic 30.0%
GATTTGGAAAATAAAGACTC+AGG + chr1_4:75283258-75283277 None:intergenic 30.0%
! CTTTCTAGTGTACATAGTAT+TGG - chr1_4:75283346-75283365 Msa0185180:five_prime_UTR 30.0%
ATGGATGTTTCCTTATCTAT+TGG - chr1_4:75283423-75283442 Msa0185180:five_prime_UTR 30.0%
ACATATATGCTTATGGAAGC+GGG + chr1_4:75280416-75280435 None:intergenic 35.0%
CACATATATGCTTATGGAAG+CGG + chr1_4:75280417-75280436 None:intergenic 35.0%
AACACTATGCTCATGACTTT+CGG - chr1_4:75280471-75280490 Msa0185180:three_prime_UTR 35.0%
TTCTATCTTGTATTTCGCAG+TGG - chr1_4:75280927-75280946 Msa0185180:CDS 35.0%
TCGGTTAAATAGGTGAGTTT+AGG - chr1_4:75280958-75280977 Msa0185180:CDS 35.0%
CGGTTAAATAGGTGAGTTTA+GGG - chr1_4:75280959-75280978 Msa0185180:CDS 35.0%
TGAGGTTTAGATGATTTCCA+AGG - chr1_4:75280999-75281018 Msa0185180:CDS 35.0%
GAGGTTTAGATGATTTCCAA+GGG - chr1_4:75281000-75281019 Msa0185180:CDS 35.0%
TGGACACATGTAAACTTGAA+TGG - chr1_4:75281289-75281308 Msa0185180:intron 35.0%
CATGTTTATGGGTGATGATA+GGG - chr1_4:75281347-75281366 Msa0185180:intron 35.0%
TGATCATTAGGTTCATGCTT+AGG + chr1_4:75281461-75281480 None:intergenic 35.0%
GTCTGCATATTCTGATCATT+AGG + chr1_4:75281473-75281492 None:intergenic 35.0%
TGTATGAATAATCGCTGAAG+AGG + chr1_4:75281535-75281554 None:intergenic 35.0%
! TGAGTTGTTGGTGAGAAAAT+TGG + chr1_4:75281858-75281877 None:intergenic 35.0%
TCAGCATGATTCCCTATTAA+TGG - chr1_4:75281996-75282015 Msa0185180:intron 35.0%
AACTGTTATACTGCTTTCAG+AGG - chr1_4:75282135-75282154 Msa0185180:intron 35.0%
GGTAGATAGGTAGGTATATA+AGG + chr1_4:75282189-75282208 None:intergenic 35.0%
! ACATTTTGAACCTAGGAAAG+CGG + chr1_4:75282232-75282251 None:intergenic 35.0%
! AAAGTGCACATTTTGAACCT+AGG + chr1_4:75282239-75282258 None:intergenic 35.0%
TAGGTTCAAAATGTGCACTT+TGG - chr1_4:75282238-75282257 Msa0185180:intron 35.0%
AGGTTCAAAATGTGCACTTT+GGG - chr1_4:75282239-75282258 Msa0185180:intron 35.0%
AAGACAGAAGGAAAAGATGT+CGG - chr1_4:75282423-75282442 Msa0185180:CDS 35.0%
GCATTCTACATTCTAATACC+AGG + chr1_4:75282498-75282517 None:intergenic 35.0%
! CTTTGATCTTTTTGTTCTCG+AGG - chr1_4:75282595-75282614 Msa0185180:intron 35.0%
! TTGATCTTTTTGTTCTCGAG+GGG - chr1_4:75282597-75282616 Msa0185180:intron 35.0%
AAGCAAGTGATGAAAGAGTT+TGG - chr1_4:75282734-75282753 Msa0185180:CDS 35.0%
AAGTGATGAAAGAGTTTGGA+GGG - chr1_4:75282738-75282757 Msa0185180:CDS 35.0%
TCAAAATGGTTTAGTGGTTG+TGG + chr1_4:75282788-75282807 None:intergenic 35.0%
! AACCACTAAACCATTTTGAG+TGG - chr1_4:75282789-75282808 Msa0185180:CDS 35.0%
CATAAAGATGCCACTCAAAA+TGG + chr1_4:75282802-75282821 None:intergenic 35.0%
GTGATGCATGTGTGTTATAT+CGG - chr1_4:75282840-75282859 Msa0185180:CDS 35.0%
TTGGAACTAAAGCTCGTTAA+TGG - chr1_4:75282863-75282882 Msa0185180:exon 35.0%
TGGAACTAAAGCTCGTTAAT+GGG - chr1_4:75282864-75282883 Msa0185180:exon 35.0%
TCTGTTATCATAGGGAAACT+CGG + chr1_4:75282963-75282982 None:intergenic 35.0%
GCAGAATGTCTGTTATCATA+GGG + chr1_4:75282971-75282990 None:intergenic 35.0%
AGCAGAATGTCTGTTATCAT+AGG + chr1_4:75282972-75282991 None:intergenic 35.0%
TGATAACAGACATTCTGCTA+AGG - chr1_4:75282973-75282992 Msa0185180:intron 35.0%
GATAACAGACATTCTGCTAA+GGG - chr1_4:75282974-75282993 Msa0185180:intron 35.0%
ACAAGATAGTCATATGGTGA+TGG + chr1_4:75283061-75283080 None:intergenic 35.0%
CTCTCAACAAGATAGTCATA+TGG + chr1_4:75283067-75283086 None:intergenic 35.0%
ACGACATTTCATATTCGCAA+TGG - chr1_4:75283183-75283202 Msa0185180:five_prime_UTR 35.0%
CGACATTTCATATTCGCAAT+GGG - chr1_4:75283184-75283203 Msa0185180:five_prime_UTR 35.0%
GACATTTCATATTCGCAATG+GGG - chr1_4:75283185-75283204 Msa0185180:five_prime_UTR 35.0%
GATGTTTCCTTATCTATTGG+AGG - chr1_4:75283426-75283445 Msa0185180:five_prime_UTR 35.0%
! TTTCTCTGTGATGGTGATGT+TGG - chr1_4:75280599-75280618 Msa0185180:three_prime_UTR 40.0%
CAGAAAATGCAAACAGCTTC+AGG + chr1_4:75280708-75280727 None:intergenic 40.0%
! CTGAAGCTGTTTGCATTTTC+TGG - chr1_4:75280706-75280725 Msa0185180:three_prime_UTR 40.0%
!! CATTTTCTGGTCACTCTCTA+TGG - chr1_4:75280719-75280738 Msa0185180:three_prime_UTR 40.0%
GGACTGAAACTCGGTTAAAT+AGG - chr1_4:75280948-75280967 Msa0185180:CDS 40.0%
TCACATGCAGATCATCTACA+TGG + chr1_4:75281074-75281093 None:intergenic 40.0%
! TCCTTGATCTGCAGTTTTCT+AGG - chr1_4:75281097-75281116 Msa0185180:CDS 40.0%
TCCTAGAAAACTGCAGATCA+AGG + chr1_4:75281101-75281120 None:intergenic 40.0%
!! TGATCTGCAGTTTTCTAGGA+AGG - chr1_4:75281101-75281120 Msa0185180:CDS 40.0%
CCTATCATCACCCATAAACA+TGG + chr1_4:75281349-75281368 None:intergenic 40.0%
CCATGTTTATGGGTGATGAT+AGG - chr1_4:75281346-75281365 Msa0185180:intron 40.0%
CATTCTCGACCGATATATGT+AGG - chr1_4:75281384-75281403 Msa0185180:intron 40.0%
CTGCAGTAGCCTACATATAT+CGG + chr1_4:75281396-75281415 None:intergenic 40.0%
ATAATCGCTGAAGAGGAGAA+AGG + chr1_4:75281528-75281547 None:intergenic 40.0%
TACTAGAGTAAGGGATGCTT+TGG - chr1_4:75281666-75281685 Msa0185180:CDS 40.0%
ATTGACAGAAATGGAGAGCA+AGG - chr1_4:75281801-75281820 Msa0185180:CDS 40.0%
AATGGAGAGCAAGGATTTGA+TGG - chr1_4:75281810-75281829 Msa0185180:CDS 40.0%
!! CAAATTGGGCTTTGAGTTGT+TGG + chr1_4:75281870-75281889 None:intergenic 40.0%
ATAGGGAATCATGCTGATGT+TGG + chr1_4:75281993-75282012 None:intergenic 40.0%
GAGTACATACACTCCATCTT+AGG - chr1_4:75282021-75282040 Msa0185180:intron 40.0%
CAACTAACAACTTGGATAGG+CGG - chr1_4:75282058-75282077 Msa0185180:intron 40.0%
! GCTGCTCTTGCTTTAAATGA+AGG - chr1_4:75282321-75282340 Msa0185180:intron 40.0%
! GCTTTAAATGAAGGACAACC+AGG - chr1_4:75282330-75282349 Msa0185180:intron 40.0%
! TGATCTTTTTGTTCTCGAGG+GGG - chr1_4:75282598-75282617 Msa0185180:intron 40.0%
AGAGTGGAAACAGAAAGCAA+AGG - chr1_4:75282669-75282688 Msa0185180:CDS 40.0%
AGGTCGTTGCCTGATTATAA+TGG - chr1_4:75282689-75282708 Msa0185180:CDS 40.0%
GGTCGTTGCCTGATTATAAT+GGG - chr1_4:75282690-75282709 Msa0185180:CDS 40.0%
CTCTTTCATCACTTGCTTTC+TGG + chr1_4:75282732-75282751 None:intergenic 40.0%
CAAGTGATGAAAGAGTTTGG+AGG - chr1_4:75282737-75282756 Msa0185180:CDS 40.0%
TGCCACTCAAAATGGTTTAG+TGG + chr1_4:75282794-75282813 None:intergenic 40.0%
TGCATGTGTGTTATATCGGT+TGG - chr1_4:75282844-75282863 Msa0185180:CDS 40.0%
CAGTTACTGATCTTCAGAAG+CGG - chr1_4:75282921-75282940 Msa0185180:five_prime_UTR 40.0%
TGATGTGATTGATCTCGAAG+TGG - chr1_4:75283103-75283122 Msa0185180:five_prime_UTR 40.0%
GATGTGATTGATCTCGAAGT+GGG - chr1_4:75283104-75283123 Msa0185180:five_prime_UTR 40.0%
GAAATGTCGTATCAGCAAGT+GGG + chr1_4:75283173-75283192 None:intergenic 40.0%
TGAAATGTCGTATCAGCAAG+TGG + chr1_4:75283174-75283193 None:intergenic 40.0%
TGGAAAATAAAGACTCAGGG+CGG + chr1_4:75283254-75283273 None:intergenic 40.0%
ACTATGCTCATGACTTTCGG+TGG - chr1_4:75280474-75280493 Msa0185180:three_prime_UTR 45.0%
!!! TTTTAGGGTGGAGAATGCCT+TGG - chr1_4:75280647-75280666 Msa0185180:three_prime_UTR 45.0%
TCACTCTCTATGGCCATGTT+TGG - chr1_4:75280729-75280748 Msa0185180:three_prime_UTR 45.0%
!! TTTCGCAGTGGACTGAAACT+CGG - chr1_4:75280939-75280958 Msa0185180:CDS 45.0%
TAAACCTCAAGTCCTGCCTA+GGG + chr1_4:75280988-75281007 None:intergenic 45.0%
TGCTTTCTTACAGCTACCCT+TGG + chr1_4:75281019-75281038 None:intergenic 45.0%
!! GCTGTAAGAAAGCATCACAC+AGG - chr1_4:75281025-75281044 Msa0185180:CDS 45.0%
AGCATCACACAGGCTTATCA+AGG - chr1_4:75281035-75281054 Msa0185180:CDS 45.0%
ACACAGGCTTATCAAGGACA+AGG - chr1_4:75281041-75281060 Msa0185180:CDS 45.0%
TGCAAAGAAGAAGCAGGAGA+AGG + chr1_4:75281207-75281226 None:intergenic 45.0%
GTTTATGGGTGATGATAGGG+TGG - chr1_4:75281350-75281369 Msa0185180:intron 45.0%
TCATGCTTAGGCACAGCTAA+TGG + chr1_4:75281449-75281468 None:intergenic 45.0%
!! AATCATGCTGATGTTGGCTC+TGG + chr1_4:75281987-75282006 None:intergenic 45.0%
TTTACTGGGAGCTCCTAAGA+TGG + chr1_4:75282037-75282056 None:intergenic 45.0%
! TATACTGCTTTCAGAGGCAC+AGG - chr1_4:75282141-75282160 Msa0185180:intron 45.0%
CAGATGCTTGGTAGATAGGT+AGG + chr1_4:75282198-75282217 None:intergenic 45.0%
TTTGAACCTAGGAAAGCGGA+AGG + chr1_4:75282228-75282247 None:intergenic 45.0%
ACCTGGGGGAATTGAAGTTA+AGG - chr1_4:75282371-75282390 Msa0185180:CDS 45.0%
TCCTTAACTTCAATTCCCCC+AGG + chr1_4:75282375-75282394 None:intergenic 45.0%
GCTCTTAGTGCAAAGACAGA+AGG - chr1_4:75282411-75282430 Msa0185180:CDS 45.0%
CTAATACCAGGTGCATTCCA+CGG + chr1_4:75282486-75282505 None:intergenic 45.0%
!! TCTCGAAGAGCATTTGAGAG+TGG - chr1_4:75282653-75282672 Msa0185180:intron 45.0%
! CGTTGCCTGATTATAATGGG+CGG - chr1_4:75282693-75282712 Msa0185180:CDS 45.0%
!! GTTGCCTGATTATAATGGGC+GGG - chr1_4:75282694-75282713 Msa0185180:CDS 45.0%
!! TTGCCTGATTATAATGGGCG+GGG - chr1_4:75282695-75282714 Msa0185180:CDS 45.0%
GCTGAAGAGATCCTACTACA+TGG - chr1_4:75282760-75282779 Msa0185180:CDS 45.0%
TGGTTGTGGATCCATGTAGT+AGG + chr1_4:75282774-75282793 None:intergenic 45.0%
TTAATGGGAAGAAGAGCTCC+AGG - chr1_4:75282879-75282898 Msa0185180:exon 45.0%
CTAAACCTCAAGTCCTGCCT+AGG + chr1_4:75280989-75281008 None:intergenic 50.0%
TTCACCAGATGCTTCGTGAG+TGG - chr1_4:75281163-75281182 Msa0185180:CDS 50.0%
AGGAGAAGGCTCATTGAGCT+CGG + chr1_4:75281193-75281212 None:intergenic 50.0%
TCCTGCTTCTTCTTTGCAGC+AGG - chr1_4:75281209-75281228 Msa0185180:CDS 50.0%
ACCTGCTGCAAAGAAGAAGC+AGG + chr1_4:75281213-75281232 None:intergenic 50.0%
!! AGGCACAGCTAATGGACTAG+TGG + chr1_4:75281441-75281460 None:intergenic 50.0%
AGGGCAGATGCTTGGTAGAT+AGG + chr1_4:75282202-75282221 None:intergenic 50.0%
ACACAAGTTCAACCCTTCCG+CGG + chr1_4:75282277-75282296 None:intergenic 50.0%
TTCTCGAGGGGGAGACTATT+AGG - chr1_4:75282609-75282628 Msa0185180:intron 50.0%
TCTCGAGGGGGAGACTATTA+GGG - chr1_4:75282610-75282629 Msa0185180:intron 50.0%
CATCCCCGCCCATTATAATC+AGG + chr1_4:75282701-75282720 None:intergenic 50.0%
!! CTGATTATAATGGGCGGGGA+TGG - chr1_4:75282699-75282718 Msa0185180:CDS 50.0%
CAGAGCCAAACCTAATGCCA+AGG - chr1_4:75282997-75283016 Msa0185180:intron 50.0%
GTCAGCCTTGGCATTAGGTT+TGG + chr1_4:75283005-75283024 None:intergenic 50.0%
ACCTAATGCCAAGGCTGACA+TGG - chr1_4:75283006-75283025 Msa0185180:intron 50.0%
CCTAATGCCAAGGCTGACAT+GGG - chr1_4:75283007-75283026 Msa0185180:intron 50.0%
! GGTGAGTTTAGGGCTTCCCT+AGG - chr1_4:75280969-75280988 Msa0185180:CDS 55.0%
! AGTTTAGGGCTTCCCTAGGC+AGG - chr1_4:75280973-75280992 Msa0185180:CDS 55.0%
TAGGAAGGAGAGCCGTAGTG+TGG - chr1_4:75281116-75281135 Msa0185180:CDS 55.0%
GAAGCGCGACATCCACACTA+CGG + chr1_4:75281131-75281150 None:intergenic 55.0%
TGTGGATGTCGCGCTTCTTG+AGG - chr1_4:75281134-75281153 Msa0185180:CDS 55.0%
! CCTTCCACTCACGAAGCATC+TGG + chr1_4:75281170-75281189 None:intergenic 55.0%
CCAGATGCTTCGTGAGTGGA+AGG - chr1_4:75281167-75281186 Msa0185180:CDS 55.0%
GCTACTGCAGCTCTGTGAAG+AGG - chr1_4:75281406-75281425 Msa0185180:CDS 55.0%
! CAGAGGCACAGGCTTTAGTG+AGG - chr1_4:75282152-75282171 Msa0185180:intron 55.0%
! GGCACAGGCTTTAGTGAGGA+TGG - chr1_4:75282156-75282175 Msa0185180:intron 55.0%
CTAGGAAAGCGGAAGGAGGA+GGG + chr1_4:75282221-75282240 None:intergenic 55.0%
GAACCTAGGAAAGCGGAAGG+AGG + chr1_4:75282225-75282244 None:intergenic 55.0%
TTGGGACTGTTCAAGACCCG+CGG - chr1_4:75282257-75282276 Msa0185180:intron 55.0%
ACTGTTCAAGACCCGCGGAA+GGG - chr1_4:75282262-75282281 Msa0185180:intron 55.0%
CACAAGTTCAACCCTTCCGC+GGG + chr1_4:75282276-75282295 None:intergenic 55.0%
ATAGCCCCAGTTCTACGACC+TGG - chr1_4:75282354-75282373 Msa0185180:intron 55.0%
TAGCCCCAGTTCTACGACCT+GGG - chr1_4:75282355-75282374 Msa0185180:intron 55.0%
TTCCCCCAGGTCGTAGAACT+GGG + chr1_4:75282362-75282381 None:intergenic 55.0%
ATTCCCCCAGGTCGTAGAAC+TGG + chr1_4:75282363-75282382 None:intergenic 55.0%
AAGTCTCCGTGGAATGCACC+TGG - chr1_4:75282477-75282496 Msa0185180:CDS 55.0%
AGGGGGAGACTATTAGGGAG+TGG - chr1_4:75282615-75282634 Msa0185180:intron 55.0%
CCCATGTCAGCCTTGGCATT+AGG + chr1_4:75283010-75283029 None:intergenic 55.0%
AATGCCAAGGCTGACATGGG+TGG - chr1_4:75283010-75283029 Msa0185180:intron 55.0%
AACACCACCCATGTCAGCCT+TGG + chr1_4:75283017-75283036 None:intergenic 55.0%
GGTGAGCAAGATGCTGCGTT+AGG - chr1_4:75283125-75283144 Msa0185180:five_prime_UTR 55.0%
GCTTCCCTAGGCAGGACTTG+AGG - chr1_4:75280981-75281000 Msa0185180:CDS 60.0%
GAAGGAGGAGGGCAGATGCT+TGG + chr1_4:75282210-75282229 None:intergenic 60.0%
CCTAGGAAAGCGGAAGGAGG+AGG + chr1_4:75282222-75282241 None:intergenic 60.0%
CCTCCTCCTTCCGCTTTCCT+AGG - chr1_4:75282219-75282238 Msa0185180:intron 60.0%
GACTGTTCAAGACCCGCGGA+AGG - chr1_4:75282261-75282280 Msa0185180:intron 60.0%
CGTAGAACTGGGGCTATGCC+TGG + chr1_4:75282351-75282370 None:intergenic 60.0%
AGCCCCAGTTCTACGACCTG+GGG - chr1_4:75282356-75282375 Msa0185180:intron 60.0%
TCCCCCAGGTCGTAGAACTG+GGG + chr1_4:75282361-75282380 None:intergenic 60.0%
TGTCGGCATCCCAGAATGCG+AGG - chr1_4:75282440-75282459 Msa0185180:CDS 60.0%
GTCGGCATCCCAGAATGCGA+GGG - chr1_4:75282441-75282460 Msa0185180:CDS 60.0%
CATCCCAGAATGCGAGGGAG+CGG - chr1_4:75282446-75282465 Msa0185180:CDS 60.0%
TTGCCGCTCCCTCGCATTCT+GGG + chr1_4:75282452-75282471 None:intergenic 60.0%
CGGCAACTGCAAAGTCTCCG+TGG - chr1_4:75282466-75282485 Msa0185180:CDS 60.0%
GCCCCAGTTCTACGACCTGG+GGG - chr1_4:75282357-75282376 Msa0185180:intron 65.0%
GTTGCCGCTCCCTCGCATTC+TGG + chr1_4:75282453-75282472 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 75280410 75283478 75280410 ID=Msa0185180;Name=Msa0185180
chr1_4 mRNA 75280410 75283478 75280410 ID=Msa0185180-mRNA-1;Parent=Msa0185180;Name=Msa0185180-mRNA-1;_AED=0.12;_eAED=0.12;_QI=445|1|1|1|0.75|0.6|5|373|465
chr1_4 exon 75280410 75281297 75280410 ID=Msa0185180-mRNA-1:exon:25599;Parent=Msa0185180-mRNA-1
chr1_4 exon 75281390 75281900 75281390 ID=Msa0185180-mRNA-1:exon:25598;Parent=Msa0185180-mRNA-1
chr1_4 exon 75282371 75282520 75282371 ID=Msa0185180-mRNA-1:exon:25597;Parent=Msa0185180-mRNA-1
chr1_4 exon 75282658 75282941 75282658 ID=Msa0185180-mRNA-1:exon:25596;Parent=Msa0185180-mRNA-1
chr1_4 exon 75283096 75283478 75283096 ID=Msa0185180-mRNA-1:exon:25595;Parent=Msa0185180-mRNA-1
chr1_4 five_prime_UTR 75283096 75283478 75283096 ID=Msa0185180-mRNA-1:five_prime_utr;Parent=Msa0185180-mRNA-1
chr1_4 five_prime_UTR 75282880 75282941 75282880 ID=Msa0185180-mRNA-1:five_prime_utr;Parent=Msa0185180-mRNA-1
chr1_4 CDS 75282658 75282879 75282658 ID=Msa0185180-mRNA-1:cds;Parent=Msa0185180-mRNA-1
chr1_4 CDS 75282371 75282520 75282371 ID=Msa0185180-mRNA-1:cds;Parent=Msa0185180-mRNA-1
chr1_4 CDS 75281390 75281900 75281390 ID=Msa0185180-mRNA-1:cds;Parent=Msa0185180-mRNA-1
chr1_4 CDS 75280783 75281297 75280783 ID=Msa0185180-mRNA-1:cds;Parent=Msa0185180-mRNA-1
chr1_4 three_prime_UTR 75280410 75280782 75280410 ID=Msa0185180-mRNA-1:three_prime_utr;Parent=Msa0185180-mRNA-1
Gene Sequence

>Msa0185180

ATGATTTCCAAGGGTAGCTGTAAGAAAGCATCACACAGGCTTATCAAGGACAAGGCAAAGAACCATGTAGATGATCTGCATGTGATGTTCCTTGATCTGCAGTTTTCTAGGAAGGAGAGCCGTAGTGTGGATGTCGCGCTTCTTGAGGAGCAAGTTCACCAGATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAGGGTGGCAGTCTTCGATCATTCTCGACCGATATATGTAGGCTACTGCAGCTCTGTGAAGAGGAAGATGATGCCACTAGTCCATTAGCTGTGCCTAAGCATGAACCTAATGATCAGAATATGCAGACTGAAGCTAAGATGACGTTTCAAGAAAGCCAACATCAGCATGATTCCCTATTAATGGATGAGTACATACACTCCATCTTAGGAGCTCCCAGTAAATCAACTAACAACTTGGATAGGCGGCCTAATTTTGAATCAAAATGTCGTCAATTTGATTTAAATGAAGATTTTAATCACAACTGTTATACTGCTTTCAGAGGCACAGGCTTTAGTGAGGATGGTGTTGTTCCTTATATACCTACCTATCTACCAAGCATCTGCCCTCCTCCTTCCGCTTTCCTAGGTTCAAAATGTGCACTTTGGGACTGTTCAAGACCCGCGGAAGGGTTGAACTTGTGTCAAGACTATTGCAGTAGTTTTCATGCTGCTCTTGCTTTAAATGAAGGACAACCAGGCATAGCCCCAGTTCTACGACCTGGGGGAATTGAAGTTAAGGATAATTTACTGTTGGCTGCTCTTAGTGCAAAGACAGAAGGAAAAGATGTCGGCATCCCAGAATGCGAGGGAGCGGCAACTGCAAAGTCTCCGTGGAATGCACCTGAGCTCTTTGATCTTTTTGTTCTCGAGGGGGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGTCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCGTTGCCTGATTATAATGGGCGGGGATGGCATGAATCCAGAAAGCAAGTGATGAAAGAGTTTGGAGGGCTGAAGAGATCCTACTACATGGATCCACAACCACTAAACCATTTTGAGTGGCATCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGTGTTATATCGGTTGGAACTAAAGCTCGTTAATGGGAAGAAGAGCTCCAGGACAAAGATAACAAATGATTCAGTTACTGATCTTCAGAAGCGGATAAGAAGACTCTCTGCCGAGTTTCCCTATGATAACAGACATTCTGCTAAGGGCAGAGCCAAACCTAATGCCAAGGCTGACATGGGTGGTGTTTATACAGCTTCAAACAATGCACCATCACCATATGACTATCTTGTTGAGAGCACAATCGCTATTATGTGA

Protein sequence

>Msa0185180

MISKGSCKKASHRLIKDKAKNHVDDLHVMFLDLQFSRKESRSVDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLRSFSTDICRLLQLCEEEDDATSPLAVPKHEPNDQNMQTEAKMTFQESQHQHDSLLMDEYIHSILGAPSKSTNNLDRRPNFESKCRQFDLNEDFNHNCYTAFRGTGFSEDGVVPYIPTYLPSICPPPSAFLGSKCALWDCSRPAEGLNLCQDYCSSFHAALALNEGQPGIAPVLRPGGIEVKDNLLLAALSAKTEGKDVGIPECEGAATAKSPWNAPELFDLFVLEGETIREWLFFDKSRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACVLYRLELKLVNGKKSSRTKITNDSVTDLQKRIRRLSAEFPYDNRHSAKGRAKPNAKADMGGVYTASNNAPSPYDYLVESTIAIM*