AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100490 MtrunA17_Chr7g0217221 80.805 323 9 2 1 322 1 271 0.0 522
Msa1100490 MtrunA17_Chr6g0453211 66.873 323 81 7 1 311 1 309 7.65e-138 393
Msa1100490 MtrunA17_Chr3g0092401 53.030 330 111 9 1 315 2 302 2.43e-104 308
Msa1100490 MtrunA17_Chr4g0060721 51.929 337 121 11 1 312 2 322 8.59e-103 305
Msa1100490 MtrunA17_Chr7g0254411 43.909 353 119 8 1 304 1 323 1.32e-78 243
Msa1100490 MtrunA17_Chr6g0453471 50.732 205 87 5 1 191 1 205 7.81e-63 203
Msa1100490 MtrunA17_Chr4g0039971 71.552 116 33 0 1 116 2 117 9.36e-60 195
Msa1100490 MtrunA17_Chr7g0217741 70.339 118 35 0 1 118 1 118 1.39e-59 193
Msa1100490 MtrunA17_Chr3g0115821 69.828 116 35 0 1 116 1 116 1.40e-59 194
Msa1100490 MtrunA17_Chr2g0323411 67.227 119 39 0 1 119 1 119 1.71e-58 191
Msa1100490 MtrunA17_Chr1g0203411 64.844 128 44 1 1 128 1 127 2.94e-58 189
Msa1100490 MtrunA17_Chr4g0042671 70.339 118 35 0 1 118 1 118 2.83e-57 190
Msa1100490 MtrunA17_Chr1g0187761 63.281 128 47 0 1 128 1 128 7.77e-57 184
Msa1100490 MtrunA17_Chr7g0261281 62.903 124 46 0 1 124 1 124 5.31e-55 180
Msa1100490 MtrunA17_Chr7g0274581 59.350 123 50 0 1 123 1 123 6.62e-55 177
Msa1100490 MtrunA17_Chr8g0346561 63.333 120 44 0 1 120 1 120 8.38e-55 181
Msa1100490 MtrunA17_Chr1g0167661 66.379 116 39 0 1 116 1 116 1.48e-54 178
Msa1100490 MtrunA17_Chr5g0395281 65.254 118 41 0 1 118 1 118 1.55e-54 180
Msa1100490 MtrunA17_Chr5g0410961 65.254 118 41 0 1 118 1 118 2.20e-54 181
Msa1100490 MtrunA17_Chr2g0281071 66.387 119 39 1 1 118 1 119 2.37e-54 181
Msa1100490 MtrunA17_Chr1g0167691 66.379 116 39 0 1 116 1 116 2.59e-54 178
Msa1100490 MtrunA17_Chr7g0275911 62.500 120 45 0 1 120 1 120 4.42e-54 177
Msa1100490 MtrunA17_Chr4g0048511 64.706 119 41 1 1 118 1 119 5.81e-54 180
Msa1100490 MtrunA17_Chr4g0068061 64.655 116 41 0 1 116 1 116 4.12e-53 177
Msa1100490 MtrunA17_Chr3g0131121 65.517 116 40 0 1 116 1 116 6.51e-53 176
Msa1100490 MtrunA17_Chr8g0349261 67.797 118 36 2 1 116 1 118 8.07e-53 175
Msa1100490 MtrunA17_Chr3g0110351 67.797 118 38 0 1 118 1 118 9.93e-53 176
Msa1100490 MtrunA17_Chr5g0434571 67.797 118 38 0 1 118 37 154 2.43e-52 176
Msa1100490 MtrunA17_Chr6g0452271 63.559 118 43 0 1 118 1 118 3.47e-52 175
Msa1100490 MtrunA17_Chr4g0057031 67.797 118 38 0 1 118 1 118 4.74e-52 172
Msa1100490 MtrunA17_Chr4g0070611 62.602 123 46 0 1 123 1 123 6.05e-52 173
Msa1100490 MtrunA17_Chr1g0151941 64.957 117 40 1 1 116 1 117 6.07e-52 172
Msa1100490 MtrunA17_Chr4g0037141 62.931 116 43 0 1 116 1 116 9.50e-52 172
Msa1100490 MtrunA17_Chr4g0070641 62.602 123 46 0 1 123 1 123 9.68e-52 168
Msa1100490 MtrunA17_Chr3g0135311 67.521 117 37 1 1 116 1 117 2.34e-51 173
Msa1100490 MtrunA17_Chr3g0103281 62.069 116 44 0 1 116 1 116 4.10e-50 169
Msa1100490 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 4.81e-50 169
Msa1100490 MtrunA17_Chr5g0400821 63.636 121 43 1 1 120 1 121 8.13e-50 168
Msa1100490 MtrunA17_Chr8g0387421 62.712 118 44 0 1 118 1 118 1.01e-49 168
Msa1100490 MtrunA17_Chr7g0228891 64.957 117 41 0 1 117 1 117 1.21e-49 166
Msa1100490 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 1.95e-49 167
Msa1100490 MtrunA17_Chr7g0264641 63.248 117 42 1 1 116 1 117 3.26e-49 165
Msa1100490 MtrunA17_Chr4g0028311 61.983 121 45 1 1 120 1 121 4.21e-49 166
Msa1100490 MtrunA17_Chr5g0435101 61.207 116 45 0 3 118 2 117 5.54e-49 162
Msa1100490 MtrunA17_Chr8g0385321 59.483 116 47 0 1 116 1 116 1.18e-48 165
Msa1100490 MtrunA17_Chr4g0022931 57.480 127 53 1 1 126 1 127 3.28e-48 162
Msa1100490 MtrunA17_Chr3g0121241 61.607 112 43 0 5 116 35 146 1.73e-47 162
Msa1100490 MtrunA17_Chr1g0193371 59.664 119 48 0 1 119 1 119 4.68e-47 162
Msa1100490 MtrunA17_Chr1g0194951 60.345 116 46 0 1 116 1 116 5.80e-47 162
Msa1100490 MtrunA17_Chr2g0327351 63.063 111 40 1 1 110 1 111 1.28e-46 160
Msa1100490 MtrunA17_Chr2g0323351 57.851 121 51 0 1 121 1 121 1.48e-46 157
Msa1100490 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 1.94e-46 160
Msa1100490 MtrunA17_Chr4g0058631 60.169 118 47 0 1 118 1 118 2.84e-46 160
Msa1100490 MtrunA17_Chr2g0309911 60.360 111 44 0 6 116 5 115 4.13e-46 158
Msa1100490 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 7.09e-46 158
Msa1100490 MtrunA17_Chr4g0022901 59.483 116 46 1 1 115 1 116 7.60e-46 156
Msa1100490 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 8.81e-46 157
Msa1100490 MtrunA17_Chr3g0117091 50.303 165 73 2 1 156 1 165 1.88e-45 157
Msa1100490 MtrunA17_Chr7g0270891 57.627 118 50 0 1 118 1 118 2.83e-45 157
Msa1100490 MtrunA17_Chr1g0211161 52.000 150 65 1 3 145 4 153 5.28e-45 153
Msa1100490 MtrunA17_Chr2g0330041 58.621 116 48 0 1 116 1 116 5.35e-45 157
Msa1100490 MtrunA17_Chr8g0342541 56.897 116 50 0 1 116 1 116 5.40e-45 156
Msa1100490 MtrunA17_Chr6g0487491 53.237 139 56 2 1 130 1 139 7.87e-45 154
Msa1100490 MtrunA17_Chr1g0193801 55.932 118 52 0 1 118 1 118 1.02e-44 157
Msa1100490 MtrunA17_Chr8g0342521 56.897 116 50 0 1 116 1 116 2.00e-44 155
Msa1100490 MtrunA17_Chr4g0022911 57.759 116 48 1 1 115 1 116 3.31e-44 153
Msa1100490 MtrunA17_Chr4g0022881 57.018 114 49 0 1 114 1 114 6.21e-44 150
Msa1100490 MtrunA17_Chr7g0271241 62.385 109 41 0 1 109 1 109 2.28e-43 153
Msa1100490 MtrunA17_Chr5g0417821 57.547 106 45 0 11 116 6 111 1.17e-42 149
Msa1100490 MtrunA17_Chr7g0269831 59.483 116 47 0 1 116 1 116 1.41e-42 150
Msa1100490 MtrunA17_Chr4g0022891 57.522 113 48 0 1 113 1 113 2.37e-42 146
Msa1100490 MtrunA17_Chr8g0342481 56.410 117 50 1 1 116 1 117 4.03e-42 150
Msa1100490 MtrunA17_Chr4g0044421 51.908 131 63 0 1 131 1 131 4.20e-42 144
Msa1100490 MtrunA17_Chr1g0203441 58.879 107 44 0 13 119 14 120 5.78e-42 146
Msa1100490 MtrunA17_Chr7g0240821 51.449 138 60 1 17 147 6 143 9.42e-42 144
Msa1100490 MtrunA17_Chr8g0343831 60.909 110 43 0 12 121 8 117 1.72e-41 144
Msa1100490 MtrunA17_Chr3g0080861 59.434 106 43 0 12 117 37 142 2.22e-41 150
Msa1100490 MtrunA17_Chr4g0055981 60.748 107 42 0 9 115 52 158 3.75e-41 143
Msa1100490 MtrunA17_Chr3g0099131 57.009 107 46 0 12 118 41 147 6.81e-41 149
Msa1100490 MtrunA17_Chr5g0434911 57.273 110 47 0 7 116 16 125 8.07e-41 143
Msa1100490 MtrunA17_Chr7g0228231 53.043 115 54 0 12 126 14 128 9.82e-41 141
Msa1100490 MtrunA17_Chr5g0434931 59.434 106 43 0 11 116 34 139 1.59e-40 143
Msa1100490 MtrunA17_Chr2g0328771 58.491 106 44 0 12 117 20 125 2.35e-40 143
Msa1100490 MtrunA17_Chr4g0032401 59.434 106 43 0 12 117 17 122 4.76e-40 143
Msa1100490 MtrunA17_Chr1g0168661 57.143 112 48 0 6 117 15 126 5.47e-40 140
Msa1100490 MtrunA17_Chr8g0354661 58.491 106 44 0 12 117 37 142 6.43e-40 147
Msa1100490 MtrunA17_Chr1g0194291 57.407 108 46 0 11 118 20 127 1.48e-39 140
Msa1100490 MtrunA17_Chr3g0088461 57.273 110 47 0 8 117 18 127 2.22e-39 141
Msa1100490 MtrunA17_Chr6g0450101 50.833 120 57 1 1 118 1 120 4.77e-39 137
Msa1100490 MtrunA17_Chr6g0470971 56.250 112 49 0 9 120 11 122 5.07e-39 139
Msa1100490 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 5.38e-39 132
Msa1100490 MtrunA17_Chr1g0194301 51.261 119 58 0 8 126 29 147 6.49e-39 139
Msa1100490 MtrunA17_Chr7g0220341 57.143 112 46 1 11 120 24 135 7.68e-39 138
Msa1100490 MtrunA17_Chr1g0186061 58.095 105 44 0 13 117 21 125 8.29e-39 137
Msa1100490 MtrunA17_Chr5g0434831 56.075 107 47 0 10 116 5 111 1.95e-38 135
Msa1100490 MtrunA17_Chr1g0209661 39.024 205 103 4 12 207 27 218 3.23e-38 137
Msa1100490 MtrunA17_Chr7g0228991 58.491 106 44 0 11 116 28 133 8.17e-38 135
Msa1100490 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 9.90e-38 139
Msa1100490 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.23e-37 138
Msa1100490 MtrunA17_Chr2g0327821 50.435 115 57 0 9 123 3 117 1.31e-37 134
Msa1100490 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 1.62e-37 136
Msa1100490 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 1.31e-36 132
Msa1100490 MtrunA17_Chr8g0334881 51.852 108 51 1 8 114 6 113 3.61e-35 130
Msa1100490 MtrunA17_Chr2g0294811 58.696 92 38 0 1 92 1 92 4.88e-35 123
Msa1100490 MtrunA17_Chr7g0247131 75.676 74 18 0 44 117 10 83 5.09e-35 128
Msa1100490 MtrunA17_Chr4g0068921 48.739 119 61 0 8 126 20 138 5.02e-34 123
Msa1100490 MtrunA17_Chr2g0293911 51.351 111 54 0 8 118 20 130 1.45e-33 125
Msa1100490 MtrunA17_Chr5g0395221 60.714 84 33 0 5 88 5 88 2.64e-33 118
Msa1100490 MtrunA17_Chr1g0180391 48.624 109 56 0 12 120 19 127 7.96e-33 121
Msa1100490 MtrunA17_Chr2g0323321 51.429 105 50 1 1 105 1 104 2.31e-32 116
Msa1100490 MtrunA17_Chr4g0013361 49.038 104 52 1 12 114 10 113 6.14e-32 120
Msa1100490 MtrunA17_Chr8g0342531 44.828 116 59 1 1 111 1 116 1.26e-31 116
Msa1100490 MtrunA17_Chr3g0099141 52.809 89 42 0 8 96 36 124 1.96e-31 115
Msa1100490 MtrunA17_Chr5g0441131 48.598 107 54 1 12 117 9 115 2.26e-31 116
Msa1100490 MtrunA17_Chr8g0342511 55.172 87 39 0 1 87 1 87 2.37e-31 113
Msa1100490 MtrunA17_Chr4g0030881 48.246 114 52 1 9 115 4 117 5.10e-31 117
Msa1100490 MtrunA17_Chr1g0192411 47.273 110 58 0 8 117 8 117 1.68e-30 119
Msa1100490 MtrunA17_Chr5g0440781 42.336 137 72 3 12 145 12 144 1.59e-29 111
Msa1100490 MtrunA17_Chr5g0440761 42.647 136 71 3 13 145 13 144 4.22e-29 112
Msa1100490 MtrunA17_Chr5g0441141 42.336 137 72 3 12 145 12 144 4.66e-29 112
Msa1100490 MtrunA17_Chr4g0008551 41.007 139 73 2 14 144 38 175 5.06e-29 114
Msa1100490 MtrunA17_Chr8g0342461 52.222 90 42 1 1 89 1 90 9.90e-28 105
Msa1100490 MtrunA17_Chr8g0342471 52.222 90 42 1 1 89 1 90 3.34e-27 103
Msa1100490 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 8.82e-27 104
Msa1100490 MtrunA17_Chr5g0401731 49.020 102 51 1 14 115 15 115 1.10e-26 107
Msa1100490 MtrunA17_Chr4g0053431 43.609 133 65 3 14 142 5 131 1.50e-26 105
Msa1100490 MtrunA17_Chr6g0454921 48.039 102 52 1 14 115 15 115 2.53e-26 103
Msa1100490 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 8.83e-26 102
Msa1100490 MtrunA17_Chr7g0229131 58.904 73 30 0 44 116 4 76 1.02e-25 100
Msa1100490 MtrunA17_Chr3g0139671 44.660 103 56 1 14 116 85 186 3.97e-25 105
Msa1100490 MtrunA17_Chr3g0139671 31.132 106 71 2 14 118 33 137 1.35e-11 65.5
Msa1100490 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 1.90e-24 103
Msa1100490 MtrunA17_Chr1g0157731 41.748 103 59 1 14 116 91 192 6.78e-24 102
Msa1100490 MtrunA17_Chr1g0157731 31.132 106 71 2 14 118 39 143 2.48e-11 64.7
Msa1100490 MtrunA17_Chr6g0480581 44.554 101 55 1 14 114 4 103 1.22e-23 97.4
Msa1100490 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 1.24e-23 93.6
Msa1100490 MtrunA17_Chr7g0238651 36.364 121 75 1 17 135 10 130 2.25e-22 95.9
Msa1100490 MtrunA17_Chr5g0429661 40.000 125 72 2 10 134 118 239 3.73e-22 95.5
Msa1100490 MtrunA17_Chr5g0417621 41.905 105 60 1 14 118 134 237 6.62e-22 95.5
Msa1100490 MtrunA17_Chr6g0460671 41.176 102 59 1 14 115 99 199 7.05e-22 94.7
Msa1100490 MtrunA17_Chr4g0058991 40.909 110 64 1 9 118 204 312 9.08e-22 95.5
Msa1100490 MtrunA17_Chr3g0117511 41.905 105 60 1 14 118 183 286 1.85e-21 94.4
Msa1100490 MtrunA17_Chr5g0425591 45.783 83 44 1 12 93 9 91 5.41e-21 85.9
Msa1100490 MtrunA17_Chr5g0437321 44.340 106 57 2 8 112 12 116 5.62e-21 90.9
Msa1100490 MtrunA17_Chr6g0460661 41.237 97 56 1 14 110 16 111 5.68e-21 88.2
Msa1100490 MtrunA17_Chr4g0042501 37.069 116 72 1 14 129 105 219 5.99e-21 92.8
Msa1100490 MtrunA17_Chr7g0228531 41.379 116 65 3 12 126 218 331 1.30e-20 91.7
Msa1100490 MtrunA17_Chr3g0093811 54.430 79 34 1 44 122 14 90 1.06e-19 87.0
Msa1100490 MtrunA17_Chr3g0125801 39.640 111 66 1 8 118 10 119 3.38e-19 86.3
Msa1100490 MtrunA17_Chr5g0397841 42.708 96 54 1 14 109 110 204 3.48e-19 87.8
Msa1100490 MtrunA17_Chr6g0453751 42.391 92 44 2 11 93 19 110 1.36e-18 80.5
Msa1100490 MtrunA17_Chr7g0254261 38.889 108 65 1 14 121 89 195 2.31e-18 84.7
Msa1100490 MtrunA17_Chr7g0228481 38.793 116 68 3 12 126 218 331 3.74e-17 81.6
Msa1100490 MtrunA17_Chr8g0362231 36.522 115 72 1 17 131 25 138 4.50e-17 81.6
Msa1100490 MtrunA17_Chr5g0416341 38.614 101 61 1 17 117 29 128 1.45e-16 80.1
Msa1100490 MtrunA17_Chr7g0228401 43.023 86 48 1 25 110 290 374 2.39e-16 79.7
Msa1100490 MtrunA17_Chr1g0177901 40.594 101 58 2 23 123 3 101 3.06e-16 76.3
Msa1100490 MtrunA17_Chr7g0233061 37.069 116 61 4 14 123 180 289 4.01e-15 75.1
Msa1100490 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 4.19e-15 70.5
Msa1100490 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 4.19e-15 70.5
Msa1100490 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 4.19e-15 70.5
Msa1100490 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 4.19e-15 70.5
Msa1100490 MtrunA17_Chr7g0247141 61.702 47 17 1 1 46 1 47 4.56e-15 68.9
Msa1100490 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 6.32e-13 63.2
Msa1100490 MtrunA17_Chr5g0434891 66.667 39 13 0 77 115 1 39 6.79e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100490 AT3G28910.1 55.521 326 105 8 1 305 1 307 3.66e-106 313
Msa1100490 AT3G47600.1 53.939 330 114 8 1 306 1 316 1.42e-103 307
Msa1100490 AT5G62470.2 51.852 351 130 5 1 316 1 347 6.35e-103 306
Msa1100490 AT5G62470.1 51.852 351 129 6 1 316 1 346 2.18e-101 302
Msa1100490 AT1G74650.1 51.662 331 110 8 1 304 1 308 2.07e-92 278
Msa1100490 AT1G08810.1 48.457 324 86 7 1 306 1 261 3.79e-86 260
Msa1100490 AT3G47600.2 48.252 286 110 8 45 306 39 310 6.31e-67 213
Msa1100490 AT3G01140.2 50.237 211 75 5 1 183 1 209 2.23e-62 202
Msa1100490 AT5G15310.4 72.881 118 32 0 1 118 1 118 1.78e-61 196
Msa1100490 AT5G15310.1 72.881 118 32 0 1 118 1 118 5.08e-61 197
Msa1100490 AT5G15310.2 72.881 118 32 0 1 118 1 118 5.20e-61 197
Msa1100490 AT3G01140.1 49.758 207 74 5 5 183 48 252 3.27e-59 195
Msa1100490 AT5G16770.4 70.690 116 34 0 1 116 1 116 6.76e-59 192
Msa1100490 AT5G16770.3 70.690 116 34 0 1 116 1 116 6.76e-59 192
Msa1100490 AT3G02940.2 68.966 116 36 0 1 116 1 116 1.12e-58 191
Msa1100490 AT5G16770.1 70.690 116 34 0 1 116 1 116 1.83e-58 191
Msa1100490 AT5G16770.2 70.690 116 34 0 1 116 1 116 1.83e-58 191
Msa1100490 AT3G02940.1 68.966 116 36 0 1 116 1 116 2.15e-58 191
Msa1100490 AT3G02940.3 68.966 116 36 0 1 116 1 116 2.15e-58 191
Msa1100490 AT2G31180.1 68.908 119 37 0 1 119 1 119 1.36e-57 186
Msa1100490 AT1G06180.1 67.460 126 41 0 1 126 1 126 1.49e-57 186
Msa1100490 AT4G28110.1 66.387 119 40 0 1 119 1 119 2.09e-57 187
Msa1100490 AT3G23250.1 66.667 120 40 0 1 120 1 120 2.16e-57 187
Msa1100490 AT3G61250.1 69.828 116 35 0 1 116 1 116 6.05e-57 186
Msa1100490 AT1G34670.1 67.241 116 38 0 1 116 1 116 4.77e-56 186
Msa1100490 AT4G21440.1 66.102 118 40 0 1 118 1 118 3.06e-55 183
Msa1100490 AT1G56160.1 65.217 115 40 0 2 116 4 118 6.19e-55 181
Msa1100490 AT4G05100.1 65.546 119 40 1 1 118 1 119 5.62e-54 179
Msa1100490 AT1G22640.1 64.655 116 41 0 1 116 1 116 3.25e-53 175
Msa1100490 AT5G10280.1 46.078 204 87 4 1 186 1 199 9.39e-53 176
Msa1100490 AT5G61420.2 63.793 116 42 0 1 116 1 116 1.20e-52 177
Msa1100490 AT2G16720.1 64.655 116 41 0 1 116 1 116 1.52e-52 174
Msa1100490 AT1G66230.1 66.102 118 40 0 1 118 1 118 2.45e-52 174
Msa1100490 AT1G79180.1 63.559 118 43 0 2 119 4 121 2.75e-52 174
Msa1100490 AT5G54230.1 66.949 118 39 0 1 118 1 118 3.15e-52 175
Msa1100490 AT4G17785.2 64.957 117 40 1 1 116 1 117 6.25e-52 175
Msa1100490 AT5G07690.1 63.793 116 42 0 1 116 1 116 7.12e-52 174
Msa1100490 AT5G56110.1 64.655 116 41 0 1 116 1 116 7.36e-52 174
Msa1100490 AT4G17785.1 64.957 117 40 1 1 116 1 117 9.24e-52 175
Msa1100490 AT5G60890.1 63.559 118 43 0 1 118 1 118 9.88e-52 173
Msa1100490 AT4G09460.1 63.793 116 42 0 1 116 1 116 1.28e-51 171
Msa1100490 AT4G38620.1 63.793 116 42 0 1 116 1 116 1.50e-51 172
Msa1100490 AT3G13540.1 55.556 144 58 2 5 142 16 159 2.06e-51 171
Msa1100490 AT5G65230.1 63.793 116 42 0 1 116 1 116 2.72e-51 172
Msa1100490 AT5G49330.1 62.931 116 43 0 1 116 1 116 3.35e-51 173
Msa1100490 AT1G35515.1 62.069 116 44 0 1 116 1 116 3.47e-51 169
Msa1100490 AT4G34990.1 62.931 116 43 0 1 116 1 116 5.84e-51 170
Msa1100490 AT1G18570.1 65.546 119 40 1 1 118 1 119 9.04e-51 172
Msa1100490 AT5G57620.1 61.417 127 48 1 1 126 1 127 1.01e-50 171
Msa1100490 AT1G74080.1 61.864 118 45 0 1 118 1 118 3.58e-50 170
Msa1100490 AT3G49690.1 64.463 121 42 1 1 120 1 121 4.01e-50 169
Msa1100490 AT1G16490.1 58.400 125 51 1 2 126 4 127 5.60e-50 167
Msa1100490 AT4G37780.1 61.157 121 46 1 1 120 1 121 7.11e-50 168
Msa1100490 AT4G12350.1 62.500 120 45 0 1 120 1 120 8.84e-50 167
Msa1100490 AT5G07700.1 61.207 116 45 0 1 116 1 116 1.06e-49 169
Msa1100490 AT5G07700.2 61.207 116 45 0 1 116 1 116 1.06e-49 169
Msa1100490 AT5G16600.1 63.559 118 43 0 1 118 1 118 1.59e-49 168
Msa1100490 AT2G47460.1 61.207 116 45 0 1 116 1 116 4.31e-49 168
Msa1100490 AT5G65790.1 63.636 121 43 1 1 120 1 121 6.02e-49 168
Msa1100490 AT1G74430.1 64.407 118 42 0 1 118 1 118 6.04e-49 165
Msa1100490 AT4G22680.1 63.559 118 43 0 1 118 1 118 9.37e-49 164
Msa1100490 AT3G62610.1 62.931 116 43 0 1 116 1 116 1.71e-48 166
Msa1100490 AT5G23000.1 62.393 117 43 1 1 116 1 117 2.19e-48 165
Msa1100490 AT1G63910.1 61.017 118 46 0 1 118 1 118 2.68e-48 166
Msa1100490 AT2G36890.1 63.248 117 42 1 1 116 1 117 5.39e-48 163
Msa1100490 AT2G36890.2 63.248 117 42 1 1 116 42 158 9.83e-48 164
Msa1100490 AT3G12820.1 62.069 116 44 0 3 118 5 120 1.47e-47 160
Msa1100490 AT5G14750.1 66.346 104 35 0 13 116 17 120 4.59e-47 158
Msa1100490 AT3G28470.1 60.909 110 43 0 1 110 1 110 1.43e-46 160
Msa1100490 AT5G62320.1 52.381 147 62 2 2 141 3 148 1.95e-46 157
Msa1100490 AT5G26660.1 50.000 150 66 1 1 141 1 150 2.87e-46 160
Msa1100490 AT1G18710.1 60.169 118 47 0 1 118 1 118 3.66e-46 157
Msa1100490 AT3G28910.2 44.000 250 100 8 77 305 1 231 3.97e-46 157
Msa1100490 AT1G79180.2 49.669 151 43 1 2 119 4 154 4.18e-46 159
Msa1100490 AT1G09540.1 55.147 136 61 0 1 136 1 136 4.35e-46 160
Msa1100490 AT3G13890.2 58.621 116 48 0 1 116 1 116 5.08e-46 160
Msa1100490 AT5G14340.1 60.684 117 46 0 1 117 13 129 6.32e-46 157
Msa1100490 AT4G01680.3 58.974 117 48 0 1 117 1 117 1.16e-45 155
Msa1100490 AT5G40330.1 64.423 104 37 0 13 116 13 116 1.77e-45 154
Msa1100490 AT4G01680.1 58.974 117 48 0 1 117 1 117 5.81e-45 156
Msa1100490 AT5G35550.1 59.292 113 46 0 9 121 11 123 1.58e-44 153
Msa1100490 AT3G27920.1 64.423 104 37 0 13 116 15 118 1.59e-44 152
Msa1100490 AT1G57560.1 56.780 118 51 0 1 118 1 118 2.35e-44 154
Msa1100490 AT1G57560.2 56.780 118 51 0 1 118 1 118 3.22e-44 152
Msa1100490 AT3G12720.1 57.658 111 47 0 6 116 16 126 3.72e-43 151
Msa1100490 AT3G13890.1 54.400 125 48 1 1 116 1 125 6.45e-43 152
Msa1100490 AT5G52600.1 58.407 113 44 1 6 115 3 115 7.34e-43 147
Msa1100490 AT3G01530.1 56.637 113 48 1 8 119 20 132 1.41e-41 144
Msa1100490 AT4G01680.2 53.488 129 48 1 1 117 1 129 1.76e-41 147
Msa1100490 AT2G32460.2 61.905 105 40 0 11 115 5 109 1.79e-41 150
Msa1100490 AT2G32460.1 61.905 105 40 0 11 115 17 121 1.86e-41 150
Msa1100490 AT3G30210.1 59.633 109 44 0 11 119 26 134 2.42e-41 145
Msa1100490 AT5G55020.1 60.748 107 42 0 12 118 26 132 2.77e-41 150
Msa1100490 AT1G66370.1 56.522 115 46 1 1 115 1 111 8.59e-41 143
Msa1100490 AT2G26960.1 60.377 106 42 0 9 114 17 122 9.43e-41 147
Msa1100490 AT5G06100.1 55.556 108 48 0 8 115 28 135 1.42e-40 147
Msa1100490 AT3G11440.2 55.769 104 46 0 12 115 41 144 3.92e-40 146
Msa1100490 AT5G06100.5 55.556 108 48 0 8 115 28 135 3.97e-40 147
Msa1100490 AT5G06100.2 55.556 108 48 0 8 115 28 135 3.97e-40 147
Msa1100490 AT5G06100.3 55.556 108 48 0 8 115 28 135 3.97e-40 147
Msa1100490 AT5G06100.4 55.556 108 48 0 8 115 28 135 3.97e-40 147
Msa1100490 AT4G26930.1 57.658 111 43 1 8 114 11 121 8.12e-40 144
Msa1100490 AT3G11440.3 55.769 104 46 0 12 115 41 144 1.78e-39 146
Msa1100490 AT3G11440.4 55.769 104 46 0 12 115 41 144 1.78e-39 146
Msa1100490 AT3G11440.1 55.769 104 46 0 12 115 41 144 1.78e-39 146
Msa1100490 AT3G27810.1 54.630 108 49 0 12 119 20 127 2.00e-39 139
Msa1100490 AT3G24310.1 58.716 109 45 0 9 117 15 123 2.24e-39 140
Msa1100490 AT4G13480.1 57.759 116 47 1 13 128 7 120 3.95e-39 139
Msa1100490 AT2G47190.1 56.604 106 46 0 12 117 20 125 6.27e-39 139
Msa1100490 AT5G12870.1 57.944 107 45 0 12 118 18 124 7.22e-39 139
Msa1100490 AT3G08500.1 55.455 110 49 0 8 117 26 135 2.00e-38 139
Msa1100490 AT5G40350.1 54.630 108 49 0 12 119 17 124 2.29e-38 135
Msa1100490 AT1G25340.1 51.754 114 55 0 13 126 19 132 1.03e-37 136
Msa1100490 AT3G46130.1 51.786 112 54 0 9 120 6 117 1.15e-37 135
Msa1100490 AT5G59780.3 51.786 112 54 0 9 120 5 116 2.89e-37 133
Msa1100490 AT4G25560.1 52.991 117 55 0 10 126 8 124 3.08e-37 134
Msa1100490 AT1G68320.1 50.427 117 58 0 10 126 17 133 7.06e-37 134
Msa1100490 AT3G48920.1 51.304 115 54 1 9 121 15 129 8.32e-37 133
Msa1100490 AT5G52260.1 45.930 172 81 4 9 180 9 168 8.62e-37 133
Msa1100490 AT1G48000.1 53.774 106 49 0 12 117 32 137 1.44e-36 132
Msa1100490 AT1G74650.3 40.392 255 102 8 77 304 1 232 7.90e-36 130
Msa1100490 AT1G66380.1 57.547 106 45 0 10 115 6 111 1.37e-35 126
Msa1100490 AT1G66390.1 56.604 106 46 0 10 115 6 111 2.26e-34 126
Msa1100490 AT1G56650.1 56.604 106 46 0 10 115 6 111 3.80e-34 125
Msa1100490 AT1G25340.2 50.000 114 52 1 13 126 19 127 3.89e-34 126
Msa1100490 AT1G25340.3 50.000 114 52 1 13 126 19 127 6.32e-34 126
Msa1100490 AT3G60460.1 50.467 107 52 1 9 114 8 114 9.96e-34 126
Msa1100490 AT5G49620.1 50.435 115 57 0 12 126 26 140 1.53e-32 123
Msa1100490 AT3G06490.1 49.580 119 60 0 8 126 15 133 1.75e-32 123
Msa1100490 AT3G53200.1 48.246 114 59 0 9 122 6 119 4.95e-32 120
Msa1100490 AT5G35550.2 67.532 77 25 0 45 121 50 126 9.02e-32 119
Msa1100490 AT5G14750.3 72.464 69 19 0 48 116 18 86 3.96e-31 115
Msa1100490 AT3G12820.2 70.423 71 21 0 48 118 2 72 2.86e-30 114
Msa1100490 AT5G49620.2 44.961 129 57 1 12 126 26 154 5.47e-29 114
Msa1100490 AT2G26950.1 47.525 101 53 0 9 109 13 113 9.49e-29 114
Msa1100490 AT5G26660.2 47.748 111 49 1 40 141 9 119 1.51e-28 112
Msa1100490 AT1G74650.2 38.115 244 101 8 88 304 7 227 3.03e-28 110
Msa1100490 AT2G39880.1 49.057 106 45 2 14 115 50 150 8.57e-28 111
Msa1100490 AT2G23290.1 50.000 102 50 1 14 115 13 113 4.38e-27 108
Msa1100490 AT5G59780.2 56.410 78 34 0 43 120 18 95 1.87e-26 104
Msa1100490 AT4G37260.1 48.039 102 52 1 14 115 13 113 2.32e-26 106
Msa1100490 AT3G46130.4 56.410 78 34 0 43 120 18 95 2.80e-26 104
Msa1100490 AT3G55730.1 47.170 106 47 2 14 115 56 156 2.91e-26 107
Msa1100490 AT3G46130.3 57.143 77 33 0 44 120 9 85 3.02e-26 104
Msa1100490 AT5G02320.1 48.077 104 53 1 14 117 127 229 4.70e-26 108
Msa1100490 AT5G02320.2 48.077 104 53 1 14 117 127 229 4.70e-26 108
Msa1100490 AT5G02320.3 48.077 104 53 1 14 117 67 169 6.00e-26 107
Msa1100490 AT3G09230.1 42.400 125 52 3 14 134 55 163 1.93e-25 105
Msa1100490 AT3G53200.2 52.381 84 40 0 39 122 3 86 6.25e-25 100
Msa1100490 AT3G27810.2 56.000 75 33 0 45 119 4 78 7.51e-25 99.4
Msa1100490 AT5G11510.3 43.689 103 57 1 14 116 81 182 2.15e-24 104
Msa1100490 AT5G11510.3 31.132 106 71 2 14 118 29 133 2.48e-11 65.1
Msa1100490 AT5G11510.1 43.689 103 57 1 14 116 81 182 2.15e-24 104
Msa1100490 AT5G11510.1 31.132 106 71 2 14 118 29 133 2.48e-11 65.1
Msa1100490 AT5G11510.4 43.689 103 57 1 14 116 81 182 2.15e-24 104
Msa1100490 AT5G11510.4 31.132 106 71 2 14 118 29 133 2.48e-11 65.1
Msa1100490 AT5G11510.2 43.925 107 51 2 14 116 81 182 2.68e-24 103
Msa1100490 AT5G11510.2 31.132 106 71 2 14 118 29 133 2.73e-11 65.1
Msa1100490 AT5G11510.5 43.925 107 51 2 14 116 81 182 2.95e-24 103
Msa1100490 AT5G11510.5 31.132 106 71 2 14 118 29 133 2.80e-11 65.1
Msa1100490 AT1G69560.1 42.727 110 62 1 9 118 102 210 5.06e-24 100
Msa1100490 AT3G27785.1 42.241 116 66 1 9 124 184 298 5.52e-24 102
Msa1100490 AT4G32730.5 41.748 103 59 1 14 116 87 188 5.92e-24 103
Msa1100490 AT4G32730.4 41.748 103 59 1 14 116 87 188 5.92e-24 103
Msa1100490 AT4G32730.3 41.748 103 59 1 14 116 87 188 5.92e-24 103
Msa1100490 AT4G32730.2 41.748 103 59 1 14 116 87 188 5.92e-24 103
Msa1100490 AT4G32730.1 41.748 103 59 1 14 116 87 188 6.89e-24 102
Msa1100490 AT1G69560.2 42.727 110 62 1 9 118 118 226 7.07e-24 100
Msa1100490 AT1G66380.3 63.889 72 26 0 44 115 7 78 7.83e-24 94.4
Msa1100490 AT5G40350.2 56.000 75 33 0 45 119 5 79 9.78e-24 95.9
Msa1100490 AT3G50060.1 45.098 102 55 1 14 115 6 106 1.88e-23 98.6
Msa1100490 AT5G40360.1 39.823 113 66 2 9 121 153 263 2.05e-23 99.4
Msa1100490 AT1G17950.1 43.137 102 57 1 14 115 5 105 2.36e-23 97.1
Msa1100490 AT1G26780.1 41.284 109 63 1 14 122 98 205 3.34e-23 97.4
Msa1100490 AT5G67300.1 32.022 178 96 3 14 191 6 158 3.60e-23 97.8
Msa1100490 AT1G22640.3 68.966 58 18 0 59 116 2 59 3.71e-23 95.1
Msa1100490 AT5G14750.4 70.690 58 17 0 59 116 2 59 4.54e-23 93.2
Msa1100490 AT5G14750.2 70.690 58 17 0 59 116 2 59 4.54e-23 93.2
Msa1100490 AT1G26780.2 41.284 109 63 1 14 122 98 205 7.17e-23 97.8
Msa1100490 AT3G23250.2 66.129 62 21 0 59 120 2 63 1.06e-22 94.7
Msa1100490 AT3G09370.1 45.098 102 55 1 14 115 130 230 1.07e-22 98.6
Msa1100490 AT3G09370.2 45.098 102 55 1 14 115 135 235 1.09e-22 98.6
Msa1100490 AT3G09370.3 45.098 102 55 1 14 115 143 243 1.44e-22 98.6
Msa1100490 AT2G37630.1 37.190 121 73 2 17 135 7 126 2.81e-22 96.3
Msa1100490 AT5G58850.1 39.655 116 64 2 14 124 105 219 3.84e-22 96.7
Msa1100490 AT5G11050.1 36.567 134 81 3 12 143 103 234 4.06e-22 96.3
Msa1100490 AT4G18770.1 38.393 112 68 1 9 120 212 322 4.98e-22 96.3
Msa1100490 AT1G66380.2 47.475 99 51 1 10 107 6 104 5.26e-22 89.4
Msa1100490 AT1G08810.3 34.034 238 76 7 88 307 5 179 3.29e-21 90.1
Msa1100490 AT1G08810.2 34.034 238 76 7 88 307 5 179 3.29e-21 90.1
Msa1100490 AT5G17800.1 40.187 107 63 1 14 120 93 198 3.31e-21 92.8
Msa1100490 AT1G18960.1 43.689 103 55 2 14 116 10 109 4.41e-21 92.0
Msa1100490 AT4G33450.1 37.838 111 68 1 9 119 14 123 5.51e-21 90.5
Msa1100490 AT1G73410.1 41.509 106 61 1 14 119 6 110 1.04e-20 89.7
Msa1100490 AT1G73410.2 41.509 106 61 1 14 119 6 110 1.92e-20 88.2
Msa1100490 AT1G71030.1 48.148 81 41 1 38 118 7 86 2.59e-19 84.7
Msa1100490 AT1G71030.2 52.941 68 32 0 51 118 5 72 3.42e-19 84.0
Msa1100490 AT5G39700.1 37.273 110 68 1 9 118 51 159 3.66e-19 84.3
Msa1100490 AT3G29020.1 36.190 105 66 1 14 118 65 168 5.83e-19 84.7
Msa1100490 AT2G25230.1 37.410 139 72 5 9 135 21 156 8.86e-19 84.3
Msa1100490 AT3G29020.2 36.190 105 66 1 14 118 67 170 1.19e-18 85.1
Msa1100490 AT4G00540.2 38.182 110 64 2 12 118 101 209 1.44e-17 83.2
Msa1100490 AT2G02820.3 35.246 122 75 2 17 135 33 153 1.76e-17 82.4
Msa1100490 AT4G00540.1 38.182 110 64 2 12 118 99 207 2.49e-17 82.8
Msa1100490 AT1G14350.2 38.614 101 61 1 17 117 28 127 2.99e-17 82.4
Msa1100490 AT1G14350.1 38.614 101 61 1 17 117 28 127 2.99e-17 82.4
Msa1100490 AT2G02820.2 35.246 122 75 2 17 135 33 153 3.07e-17 82.4
Msa1100490 AT2G02820.1 35.246 122 75 2 17 135 33 153 3.14e-17 82.4
Msa1100490 AT5G40430.1 34.711 121 72 3 9 124 49 167 1.20e-15 75.9
Msa1100490 AT4G25560.2 53.704 54 25 0 73 126 5 58 1.33e-12 66.6
Msa1100490 AT5G59780.1 50.980 51 25 0 70 120 1 51 1.05e-11 63.2
Msa1100490 AT3G46130.2 50.980 51 25 0 70 120 1 51 1.47e-11 63.2

Find 71 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGAACACAATTTAAAGTT+AGG 0.242581 7_3:-30384851 Msa1100490:three_prime_UTR
AACATAGCTCGTTTACTAAA+AGG 0.252975 7_3:-30385469 Msa1100490:CDS
CTAAAACCTCTTGATTTGAT+AGG 0.282858 7_3:+30387011 None:intergenic
CTTCTTTCCCATTGACCTCT+TGG 0.294000 7_3:+30385652 None:intergenic
AAGAACATGGTCCTGGAAAT+TGG 0.298566 7_3:-30386770 Msa1100490:CDS
GAAACATTTGAATCTTTGTT+TGG 0.358400 7_3:-30385331 Msa1100490:CDS
ATGTTGTTGCTTGGTTCTAA+TGG 0.366195 7_3:-30385008 Msa1100490:three_prime_UTR
ATGTCATTATCTGTTCTTTG+TGG 0.377477 7_3:+30385787 None:intergenic
GTACTAACCGATGATTTGAT+TGG 0.381105 7_3:+30385433 None:intergenic
ACATCATCACAACCACATTT+CGG 0.388600 7_3:+30385027 None:intergenic
GAAAATGAGTTACTATTTGT+AGG 0.397920 7_3:+30385541 None:intergenic
GGAACAGCCCTCCAATTTCC+AGG 0.403047 7_3:+30386759 None:intergenic
GCAAAAGTTGCAGACTTAGA+TGG 0.403906 7_3:-30386442 Msa1100490:CDS
ACAAGTATGATATCTTCTTC+AGG 0.408889 7_3:+30386804 None:intergenic
AAGGTCTATAGAATAGAAAT+TGG 0.417780 7_3:-30386932 Msa1100490:five_prime_UTR
TTCCTAAAAGATCTTGAAGA+TGG 0.422826 7_3:+30386354 None:intergenic
TATGAACTATTAACCTGTCT+TGG 0.426618 7_3:+30386734 None:intergenic
AGATTGACCTGGTTCTTTAG+TGG 0.427373 7_3:+30385516 None:intergenic
TGGAACACAATTTAAAGTTA+GGG 0.434797 7_3:-30384850 Msa1100490:three_prime_UTR
AGAGAGGGAGAAGAAGAAAA+AGG 0.442631 7_3:-30386951 Msa1100490:five_prime_UTR
CCATTTCTCAAGCAAAGAAA+AGG 0.449839 7_3:+30385198 None:intergenic
AACTATTAACCTGTCTTGGT+TGG 0.452548 7_3:+30386738 None:intergenic
TCTTGTAAAACAGTTGCATC+TGG 0.453307 7_3:+30385256 None:intergenic
AAGAATTCCAAGAGGTCAAT+GGG 0.456644 7_3:-30385659 Msa1100490:CDS
ACCTAAGGCCAGGAATCAAA+AGG 0.458436 7_3:-30386412 Msa1100490:CDS
ATTGTTTCCGAACCAACATC+AGG 0.463985 7_3:+30385223 None:intergenic
AAAGAATTCCAAGAGGTCAA+TGG 0.463998 7_3:-30385660 Msa1100490:CDS
AAAATGAGTTACTATTTGTA+GGG 0.472669 7_3:+30385542 None:intergenic
CTCTAAAATCGTTGCAATTG+TGG 0.474970 7_3:-30384870 Msa1100490:three_prime_UTR
AGCAGAATCAAAGTTGTTGA+AGG 0.476547 7_3:+30385387 None:intergenic
CAATCTTTGATGTATTGCCT+TGG 0.485774 7_3:-30384752 Msa1100490:three_prime_UTR
CATTATCTGTTCTTTGTGGA+AGG 0.487830 7_3:+30385791 None:intergenic
GTTGTGATGATGTTGTTGCT+TGG 0.499367 7_3:-30385017 Msa1100490:three_prime_UTR
AAGTAAGCCTGATGTTGGTT+CGG 0.506124 7_3:-30385230 Msa1100490:CDS
TATATACAAGAACATGGTCC+TGG 0.507906 7_3:-30386777 Msa1100490:CDS
TTTGATTCTGCTTCTAGTAG+TGG 0.508963 7_3:-30385376 Msa1100490:CDS
AGGGCTGTTCCAACCAAGAC+AGG 0.512302 7_3:-30386747 Msa1100490:intron
AAGCTCAAGAAATCACAAAC+AGG 0.513721 7_3:-30385733 Msa1100490:CDS
TAGCTCGTTTACTAAAAGGT+TGG 0.524179 7_3:-30385465 Msa1100490:CDS
CCTAAGGCCAGGAATCAAAA+GGG 0.528003 7_3:-30386411 Msa1100490:CDS
TTGAAACCTATCAAATCAAG+AGG 0.529011 7_3:-30387017 None:intergenic
TTATATGATTTCTATAGGAA+AGG 0.530672 7_3:-30384784 Msa1100490:three_prime_UTR
TGGACTAATTACCTAAGGCC+AGG 0.531588 7_3:-30386422 Msa1100490:CDS
TCAGAATTTGATGATTCCAA+AGG 0.534725 7_3:+30385301 None:intergenic
TGTATCTTACTGCAACGTAA+AGG 0.535748 7_3:+30384937 None:intergenic
TTCAAGTTCTGAAATATATG+TGG 0.543756 7_3:-30384827 Msa1100490:three_prime_UTR
TGCTTCTAGTAGTGGAACAA+AGG 0.546510 7_3:-30385368 Msa1100490:CDS
ACTTCAAACAGATATTCAAA+TGG 0.548282 7_3:-30385629 Msa1100490:CDS
AAAAGAGAAACAAAGAAACA+TGG 0.557302 7_3:-30386877 Msa1100490:exon
AAAGAGAAACAAAGAAACAT+GGG 0.560455 7_3:-30386876 Msa1100490:exon
ATATCTTCTTCAGGAGTCCA+TGG 0.561586 7_3:+30386813 None:intergenic
CATTTCTCAAGCAAAGAAAA+GGG 0.562614 7_3:+30385199 None:intergenic
GCTTCTAGTAGTGGAACAAA+GGG 0.568848 7_3:-30385367 Msa1100490:CDS
GTCTATAGAATAGAAATTGG+TGG 0.569327 7_3:-30386929 Msa1100490:five_prime_UTR
TTAGATGGACTAATTACCTA+AGG 0.574462 7_3:-30386427 Msa1100490:CDS
GATGAAAGTAAGCCTGATGT+TGG 0.577667 7_3:-30385235 Msa1100490:CDS
TTTCGGTTTAGATAAAGCTA+CGG 0.578767 7_3:-30385083 Msa1100490:three_prime_UTR
CTTGTTTCTCTTCAGTACCA+AGG 0.584182 7_3:+30384735 None:intergenic
GGGTAACTTCACTGAACAAG+AGG 0.588024 7_3:-30386390 Msa1100490:CDS
AAGTGATCATACACTGAGAG+AGG 0.593879 7_3:-30386967 Msa1100490:five_prime_UTR
AGTGATCATACACTGAGAGA+GGG 0.610005 7_3:-30386966 Msa1100490:five_prime_UTR
AACATGGTCCTGGAAATTGG+AGG 0.614224 7_3:-30386767 Msa1100490:CDS
ACACCTTCTTTGTCACAACA+AGG 0.616257 7_3:+30386846 None:intergenic
CCACCTTGTTGTGACAAAGA+AGG 0.618215 7_3:-30386849 Msa1100490:CDS
ACATGGTCCTGGAAATTGGA+GGG 0.621706 7_3:-30386766 Msa1100490:CDS
ATACTAGCAAAGCCGAAATG+TGG 0.637070 7_3:-30385039 Msa1100490:three_prime_UTR
CAGTAAGATACAAACAAATG+TGG 0.641783 7_3:-30384926 Msa1100490:three_prime_UTR
GTTACTTATATACAAGAACA+TGG 0.665375 7_3:-30386783 Msa1100490:CDS
CTAAGGCCAGGAATCAAAAG+GGG 0.682983 7_3:-30386410 Msa1100490:CDS
CCTTCTTTGTCACAACAAGG+TGG 0.693026 7_3:+30386849 None:intergenic
GCATCTCAAAGAATTCCAAG+AGG 0.704482 7_3:-30385667 Msa1100490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTATTACTTAAC+TGG - chr7_3:30385090-30385109 Msa1100490:three_prime_UTR 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG - chr7_3:30385171-30385190 Msa1100490:CDS 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG - chr7_3:30385385-30385404 Msa1100490:CDS 10.0%
!! TACAAAAAATTATAGAAATA+GGG + chr7_3:30385635-30385654 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG + chr7_3:30385636-30385655 None:intergenic 10.0%
!! AAAAAAACAACTAAAAAAAT+TGG + chr7_3:30385777-30385796 None:intergenic 10.0%
!!! ATTTTTTTAGTTGTTTTTTT+TGG - chr7_3:30385777-30385796 Msa1100490:CDS 10.0%
!!! TTTTATTTTTATTACTTAAC+TGG - chr7_3:30385090-30385109 Msa1100490:three_prime_UTR 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG - chr7_3:30385171-30385190 Msa1100490:CDS 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG - chr7_3:30385385-30385404 Msa1100490:CDS 10.0%
!! TACAAAAAATTATAGAAATA+GGG + chr7_3:30385635-30385654 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG + chr7_3:30385636-30385655 None:intergenic 10.0%
!! AAAAAAACAACTAAAAAAAT+TGG + chr7_3:30385777-30385796 None:intergenic 10.0%
!!! ATTTTTTTAGTTGTTTTTTT+TGG - chr7_3:30385777-30385796 Msa1100490:CDS 10.0%
!! TTTAAATATCCCTAAAAAAA+AGG - chr7_3:30385677-30385696 Msa1100490:CDS 15.0%
!! ATAATGACATAAAAAACTAT+TGG - chr7_3:30385890-30385909 Msa1100490:intron 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG + chr7_3:30386090-30386109 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG - chr7_3:30386875-30386894 Msa1100490:exon 15.0%
!! TTTAAATATCCCTAAAAAAA+AGG - chr7_3:30385677-30385696 Msa1100490:CDS 15.0%
!! ATAATGACATAAAAAACTAT+TGG - chr7_3:30385890-30385909 Msa1100490:intron 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG + chr7_3:30386090-30386109 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG - chr7_3:30386875-30386894 Msa1100490:exon 15.0%
!! GTATATCATAGATCATTAAT+AGG - chr7_3:30385017-30385036 Msa1100490:three_prime_UTR 20.0%
!! TGATCATGAATACATTATTT+AGG - chr7_3:30385067-30385086 Msa1100490:three_prime_UTR 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG - chr7_3:30385185-30385204 Msa1100490:CDS 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG - chr7_3:30385186-30385205 Msa1100490:CDS 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG - chr7_3:30385479-30385498 Msa1100490:CDS 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG - chr7_3:30385519-30385538 Msa1100490:CDS 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG + chr7_3:30385555-30385574 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG + chr7_3:30385568-30385587 None:intergenic 20.0%
!! TTATGAAAGAATATAAGTGT+TGG - chr7_3:30385582-30385601 Msa1100490:CDS 20.0%
!!! TTAGCAAATCCTTTTTTTTA+GGG + chr7_3:30385689-30385708 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTT+AGG + chr7_3:30385690-30385709 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG + chr7_3:30386125-30386144 None:intergenic 20.0%
!! TTATATGATTTCTATAGGAA+AGG - chr7_3:30386880-30386899 Msa1100490:exon 20.0%
!! GTATATCATAGATCATTAAT+AGG - chr7_3:30385017-30385036 Msa1100490:three_prime_UTR 20.0%
!! TGATCATGAATACATTATTT+AGG - chr7_3:30385067-30385086 Msa1100490:three_prime_UTR 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG - chr7_3:30385185-30385204 Msa1100490:CDS 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG - chr7_3:30385186-30385205 Msa1100490:CDS 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG - chr7_3:30385479-30385498 Msa1100490:CDS 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG - chr7_3:30385519-30385538 Msa1100490:CDS 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG + chr7_3:30385555-30385574 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG + chr7_3:30385568-30385587 None:intergenic 20.0%
!! TTATGAAAGAATATAAGTGT+TGG - chr7_3:30385582-30385601 Msa1100490:CDS 20.0%
!!! TTAGCAAATCCTTTTTTTTA+GGG + chr7_3:30385689-30385708 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTT+AGG + chr7_3:30385690-30385709 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG + chr7_3:30386125-30386144 None:intergenic 20.0%
!! TTATATGATTTCTATAGGAA+AGG - chr7_3:30386880-30386899 Msa1100490:exon 20.0%
! AAGGTCTATAGAATAGAAAT+TGG - chr7_3:30384732-30384751 Msa1100490:three_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG - chr7_3:30384787-30384806 Msa1100490:three_prime_UTR 25.0%
! AAAGAGAAACAAAGAAACAT+GGG - chr7_3:30384788-30384807 Msa1100490:three_prime_UTR 25.0%
! GTTACTTATATACAAGAACA+TGG - chr7_3:30384881-30384900 Msa1100490:three_prime_UTR 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG - chr7_3:30385315-30385334 Msa1100490:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG + chr7_3:30385345-30385364 None:intergenic 25.0%
! TAGGGACACAAATTAAAAAT+AGG + chr7_3:30385617-30385636 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG - chr7_3:30385653-30385672 Msa1100490:CDS 25.0%
! AGGGATATTTAAATCCATTT+AGG + chr7_3:30385670-30385689 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG - chr7_3:30385833-30385852 Msa1100490:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG - chr7_3:30385834-30385853 Msa1100490:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG - chr7_3:30386035-30386054 Msa1100490:intron 25.0%
! GAAAATGAGTTACTATTTGT+AGG + chr7_3:30386126-30386145 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG - chr7_3:30386224-30386243 Msa1100490:intron 25.0%
! GAAACATTTGAATCTTTGTT+TGG - chr7_3:30386333-30386352 Msa1100490:intron 25.0%
!!! TTAGGTTTTATCTGCATTTT+CGG - chr7_3:30386564-30386583 Msa1100490:intron 25.0%
!! TGGAACACAATTTAAAGTTA+GGG - chr7_3:30386814-30386833 Msa1100490:CDS 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG - chr7_3:30386837-30386856 Msa1100490:CDS 25.0%
! AAGGTCTATAGAATAGAAAT+TGG - chr7_3:30384732-30384751 Msa1100490:three_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG - chr7_3:30384787-30384806 Msa1100490:three_prime_UTR 25.0%
! AAAGAGAAACAAAGAAACAT+GGG - chr7_3:30384788-30384807 Msa1100490:three_prime_UTR 25.0%
! GTTACTTATATACAAGAACA+TGG - chr7_3:30384881-30384900 Msa1100490:three_prime_UTR 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG - chr7_3:30385315-30385334 Msa1100490:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG + chr7_3:30385345-30385364 None:intergenic 25.0%
! TAGGGACACAAATTAAAAAT+AGG + chr7_3:30385617-30385636 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG - chr7_3:30385653-30385672 Msa1100490:CDS 25.0%
! AGGGATATTTAAATCCATTT+AGG + chr7_3:30385670-30385689 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG - chr7_3:30385833-30385852 Msa1100490:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG - chr7_3:30385834-30385853 Msa1100490:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG - chr7_3:30386035-30386054 Msa1100490:intron 25.0%
! GAAAATGAGTTACTATTTGT+AGG + chr7_3:30386126-30386145 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG - chr7_3:30386224-30386243 Msa1100490:intron 25.0%
! GAAACATTTGAATCTTTGTT+TGG - chr7_3:30386333-30386352 Msa1100490:intron 25.0%
!!! TTAGGTTTTATCTGCATTTT+CGG - chr7_3:30386564-30386583 Msa1100490:intron 25.0%
!! TGGAACACAATTTAAAGTTA+GGG - chr7_3:30386814-30386833 Msa1100490:CDS 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG - chr7_3:30386837-30386856 Msa1100490:CDS 25.0%
GTCTATAGAATAGAAATTGG+TGG - chr7_3:30384735-30384754 Msa1100490:three_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG - chr7_3:30384827-30384846 Msa1100490:three_prime_UTR 30.0%
ACAAGTATGATATCTTCTTC+AGG + chr7_3:30384863-30384882 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG + chr7_3:30384933-30384952 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG - chr7_3:30385237-30385256 Msa1100490:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG - chr7_3:30385308-30385327 Msa1100490:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG + chr7_3:30385313-30385332 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG - chr7_3:30385808-30385827 Msa1100490:CDS 30.0%
ATGTCATTATCTGTTCTTTG+TGG + chr7_3:30385880-30385899 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG + chr7_3:30386061-30386080 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG - chr7_3:30386195-30386214 Msa1100490:intron 30.0%
! TCAGAATTTGATGATTCCAA+AGG + chr7_3:30386366-30386385 None:intergenic 30.0%
CATTTCTCAAGCAAAGAAAA+GGG + chr7_3:30386468-30386487 None:intergenic 30.0%
!! AGTTGTCCTGAAAAAGTATT+AGG - chr7_3:30386504-30386523 Msa1100490:intron 30.0%
TTTCGGTTTAGATAAAGCTA+CGG - chr7_3:30386581-30386600 Msa1100490:intron 30.0%
! ATGATTTTAAATTGCAGTCG+CGG - chr7_3:30386690-30386709 Msa1100490:intron 30.0%
CAGTAAGATACAAACAAATG+TGG - chr7_3:30386738-30386757 Msa1100490:intron 30.0%
! GTGGAACACAATTTAAAGTT+AGG - chr7_3:30386813-30386832 Msa1100490:CDS 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG + chr7_3:30386995-30387014 None:intergenic 30.0%
GTCTATAGAATAGAAATTGG+TGG - chr7_3:30384735-30384754 Msa1100490:three_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG - chr7_3:30384827-30384846 Msa1100490:three_prime_UTR 30.0%
ACAAGTATGATATCTTCTTC+AGG + chr7_3:30384863-30384882 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG + chr7_3:30384933-30384952 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG - chr7_3:30385237-30385256 Msa1100490:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG - chr7_3:30385308-30385327 Msa1100490:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG + chr7_3:30385313-30385332 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG - chr7_3:30385808-30385827 Msa1100490:CDS 30.0%
ATGTCATTATCTGTTCTTTG+TGG + chr7_3:30385880-30385899 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG + chr7_3:30386061-30386080 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG - chr7_3:30386195-30386214 Msa1100490:intron 30.0%
! TCAGAATTTGATGATTCCAA+AGG + chr7_3:30386366-30386385 None:intergenic 30.0%
CATTTCTCAAGCAAAGAAAA+GGG + chr7_3:30386468-30386487 None:intergenic 30.0%
!! AGTTGTCCTGAAAAAGTATT+AGG - chr7_3:30386504-30386523 Msa1100490:intron 30.0%
TTTCGGTTTAGATAAAGCTA+CGG - chr7_3:30386581-30386600 Msa1100490:intron 30.0%
! ATGATTTTAAATTGCAGTCG+CGG - chr7_3:30386690-30386709 Msa1100490:intron 30.0%
CAGTAAGATACAAACAAATG+TGG - chr7_3:30386738-30386757 Msa1100490:intron 30.0%
! GTGGAACACAATTTAAAGTT+AGG - chr7_3:30386813-30386832 Msa1100490:CDS 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG + chr7_3:30386995-30387014 None:intergenic 30.0%
! AAGGTGTTAAAAAAGGACCA+TGG - chr7_3:30384834-30384853 Msa1100490:three_prime_UTR 35.0%
TATATACAAGAACATGGTCC+TGG - chr7_3:30384887-30384906 Msa1100490:three_prime_UTR 35.0%
AACTATTAACCTGTCTTGGT+TGG + chr7_3:30384929-30384948 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG - chr7_3:30385036-30385055 Msa1100490:three_prime_UTR 35.0%
CATTATCTGTTCTTTGTGGA+AGG + chr7_3:30385876-30385895 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG - chr7_3:30385931-30385950 Msa1100490:intron 35.0%
AAAGAATTCCAAGAGGTCAA+TGG - chr7_3:30386004-30386023 Msa1100490:intron 35.0%
AAGAATTCCAAGAGGTCAAT+GGG - chr7_3:30386005-30386024 Msa1100490:intron 35.0%
! TTTTCTTCCACTAAAGAACC+AGG - chr7_3:30386141-30386160 Msa1100490:intron 35.0%
TAGCTCGTTTACTAAAAGGT+TGG - chr7_3:30386199-30386218 Msa1100490:intron 35.0%
GTACTAACCGATGATTTGAT+TGG + chr7_3:30386234-30386253 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG + chr7_3:30386280-30386299 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG - chr7_3:30386288-30386307 Msa1100490:intron 35.0%
!!! TTTGTTTGGTTTTGAGCCTT+TGG - chr7_3:30386347-30386366 Msa1100490:intron 35.0%
TCTTGTAAAACAGTTGCATC+TGG + chr7_3:30386411-30386430 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG + chr7_3:30386469-30386488 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG - chr7_3:30386466-30386485 Msa1100490:intron 35.0%
!!! GCACAACCTAATACTTTTTC+AGG + chr7_3:30386513-30386532 None:intergenic 35.0%
!! GAAAAAGTATTAGGTTGTGC+TGG - chr7_3:30386513-30386532 Msa1100490:intron 35.0%
!!! CAAGTTTTCTAGACTGGTTT+AGG - chr7_3:30386546-30386565 Msa1100490:intron 35.0%
ACATCATCACAACCACATTT+CGG + chr7_3:30386640-30386659 None:intergenic 35.0%
!! ATGTTGTTGCTTGGTTCTAA+TGG - chr7_3:30386656-30386675 Msa1100490:intron 35.0%
TGTATCTTACTGCAACGTAA+AGG + chr7_3:30386730-30386749 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG + chr7_3:30386796-30386815 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG - chr7_3:30386794-30386813 Msa1100490:CDS 35.0%
CAATCTTTGATGTATTGCCT+TGG - chr7_3:30386912-30386931 Msa1100490:five_prime_UTR 35.0%
! AAGGTGTTAAAAAAGGACCA+TGG - chr7_3:30384834-30384853 Msa1100490:three_prime_UTR 35.0%
TATATACAAGAACATGGTCC+TGG - chr7_3:30384887-30384906 Msa1100490:three_prime_UTR 35.0%
AACTATTAACCTGTCTTGGT+TGG + chr7_3:30384929-30384948 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG - chr7_3:30385036-30385055 Msa1100490:three_prime_UTR 35.0%
CATTATCTGTTCTTTGTGGA+AGG + chr7_3:30385876-30385895 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG - chr7_3:30385931-30385950 Msa1100490:intron 35.0%
AAAGAATTCCAAGAGGTCAA+TGG - chr7_3:30386004-30386023 Msa1100490:intron 35.0%
AAGAATTCCAAGAGGTCAAT+GGG - chr7_3:30386005-30386024 Msa1100490:intron 35.0%
! TTTTCTTCCACTAAAGAACC+AGG - chr7_3:30386141-30386160 Msa1100490:intron 35.0%
TAGCTCGTTTACTAAAAGGT+TGG - chr7_3:30386199-30386218 Msa1100490:intron 35.0%
GTACTAACCGATGATTTGAT+TGG + chr7_3:30386234-30386253 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG + chr7_3:30386280-30386299 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG - chr7_3:30386288-30386307 Msa1100490:intron 35.0%
!!! TTTGTTTGGTTTTGAGCCTT+TGG - chr7_3:30386347-30386366 Msa1100490:intron 35.0%
TCTTGTAAAACAGTTGCATC+TGG + chr7_3:30386411-30386430 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG + chr7_3:30386469-30386488 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG - chr7_3:30386466-30386485 Msa1100490:intron 35.0%
!!! GCACAACCTAATACTTTTTC+AGG + chr7_3:30386513-30386532 None:intergenic 35.0%
!! GAAAAAGTATTAGGTTGTGC+TGG - chr7_3:30386513-30386532 Msa1100490:intron 35.0%
!!! CAAGTTTTCTAGACTGGTTT+AGG - chr7_3:30386546-30386565 Msa1100490:intron 35.0%
ACATCATCACAACCACATTT+CGG + chr7_3:30386640-30386659 None:intergenic 35.0%
!! ATGTTGTTGCTTGGTTCTAA+TGG - chr7_3:30386656-30386675 Msa1100490:intron 35.0%
TGTATCTTACTGCAACGTAA+AGG + chr7_3:30386730-30386749 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG + chr7_3:30386796-30386815 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG - chr7_3:30386794-30386813 Msa1100490:CDS 35.0%
CAATCTTTGATGTATTGCCT+TGG - chr7_3:30386912-30386931 Msa1100490:five_prime_UTR 35.0%
AAGTGATCATACACTGAGAG+AGG - chr7_3:30384697-30384716 Msa1100490:three_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG - chr7_3:30384698-30384717 Msa1100490:three_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG - chr7_3:30384713-30384732 Msa1100490:three_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG + chr7_3:30384821-30384840 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG + chr7_3:30384854-30384873 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG - chr7_3:30384894-30384913 Msa1100490:three_prime_UTR 40.0%
ATGATCAACAACAGTCCTCT+TGG + chr7_3:30385054-30385073 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG - chr7_3:30385222-30385241 Msa1100490:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG + chr7_3:30385263-30385282 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG - chr7_3:30385997-30386016 Msa1100490:intron 40.0%
! AGATTGACCTGGTTCTTTAG+TGG + chr7_3:30386151-30386170 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG + chr7_3:30386162-30386181 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG - chr7_3:30386296-30386315 Msa1100490:intron 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG - chr7_3:30386297-30386316 Msa1100490:intron 40.0%
GATGAAAGTAAGCCTGATGT+TGG - chr7_3:30386429-30386448 Msa1100490:CDS 40.0%
! AAGTAAGCCTGATGTTGGTT+CGG - chr7_3:30386434-30386453 Msa1100490:CDS 40.0%
ATTGTTTCCGAACCAACATC+AGG + chr7_3:30386444-30386463 None:intergenic 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG - chr7_3:30386540-30386559 Msa1100490:intron 40.0%
ATACTAGCAAAGCCGAAATG+TGG - chr7_3:30386625-30386644 Msa1100490:intron 40.0%
! GTTGTGATGATGTTGTTGCT+TGG - chr7_3:30386647-30386666 Msa1100490:intron 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG + chr7_3:30386932-30386951 None:intergenic 40.0%
AAGTGATCATACACTGAGAG+AGG - chr7_3:30384697-30384716 Msa1100490:three_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG - chr7_3:30384698-30384717 Msa1100490:three_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG - chr7_3:30384713-30384732 Msa1100490:three_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG + chr7_3:30384821-30384840 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG + chr7_3:30384854-30384873 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG - chr7_3:30384894-30384913 Msa1100490:three_prime_UTR 40.0%
ATGATCAACAACAGTCCTCT+TGG + chr7_3:30385054-30385073 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG - chr7_3:30385222-30385241 Msa1100490:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG + chr7_3:30385263-30385282 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG - chr7_3:30385997-30386016 Msa1100490:intron 40.0%
! AGATTGACCTGGTTCTTTAG+TGG + chr7_3:30386151-30386170 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG + chr7_3:30386162-30386181 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG - chr7_3:30386296-30386315 Msa1100490:intron 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG - chr7_3:30386297-30386316 Msa1100490:intron 40.0%
GATGAAAGTAAGCCTGATGT+TGG - chr7_3:30386429-30386448 Msa1100490:CDS 40.0%
! AAGTAAGCCTGATGTTGGTT+CGG - chr7_3:30386434-30386453 Msa1100490:CDS 40.0%
ATTGTTTCCGAACCAACATC+AGG + chr7_3:30386444-30386463 None:intergenic 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG - chr7_3:30386540-30386559 Msa1100490:intron 40.0%
ATACTAGCAAAGCCGAAATG+TGG - chr7_3:30386625-30386644 Msa1100490:intron 40.0%
! GTTGTGATGATGTTGTTGCT+TGG - chr7_3:30386647-30386666 Msa1100490:intron 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG + chr7_3:30386932-30386951 None:intergenic 40.0%
CCTTCTTTGTCACAACAAGG+TGG + chr7_3:30384818-30384837 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG - chr7_3:30384815-30384834 Msa1100490:three_prime_UTR 45.0%
AACATGGTCCTGGAAATTGG+AGG - chr7_3:30384897-30384916 Msa1100490:three_prime_UTR 45.0%
ACATGGTCCTGGAAATTGGA+GGG - chr7_3:30384898-30384917 Msa1100490:three_prime_UTR 45.0%
TGGACTAATTACCTAAGGCC+AGG - chr7_3:30385242-30385261 Msa1100490:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG - chr7_3:30385252-30385271 Msa1100490:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG - chr7_3:30385253-30385272 Msa1100490:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG - chr7_3:30385254-30385273 Msa1100490:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG - chr7_3:30385274-30385293 Msa1100490:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG + chr7_3:30386015-30386034 None:intergenic 45.0%
CCTTCTTTGTCACAACAAGG+TGG + chr7_3:30384818-30384837 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG - chr7_3:30384815-30384834 Msa1100490:three_prime_UTR 45.0%
AACATGGTCCTGGAAATTGG+AGG - chr7_3:30384897-30384916 Msa1100490:three_prime_UTR 45.0%
ACATGGTCCTGGAAATTGGA+GGG - chr7_3:30384898-30384917 Msa1100490:three_prime_UTR 45.0%
TGGACTAATTACCTAAGGCC+AGG - chr7_3:30385242-30385261 Msa1100490:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG - chr7_3:30385252-30385271 Msa1100490:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG - chr7_3:30385253-30385272 Msa1100490:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG - chr7_3:30385254-30385273 Msa1100490:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG - chr7_3:30385274-30385293 Msa1100490:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG + chr7_3:30386015-30386034 None:intergenic 45.0%
!! TTCATTAAAATTATATTTAT+TGG - chr7_3:30384975-30384994 Msa1100490:three_prime_UTR 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG + chr7_3:30385508-30385527 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG - chr7_3:30385508-30385527 Msa1100490:CDS 5.0%
!! TTCATTAAAATTATATTTAT+TGG - chr7_3:30384975-30384994 Msa1100490:three_prime_UTR 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG + chr7_3:30385508-30385527 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG - chr7_3:30385508-30385527 Msa1100490:CDS 5.0%
!! CCCTTTTGATTCCTGGCCTT+AGG + chr7_3:30385256-30385275 None:intergenic 50.0%
!! CCCTTTTGATTCCTGGCCTT+AGG + chr7_3:30385256-30385275 None:intergenic 50.0%
GGAACAGCCCTCCAATTTCC+AGG + chr7_3:30384908-30384927 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG - chr7_3:30384917-30384936 Msa1100490:three_prime_UTR 55.0%
GGAACAGCCCTCCAATTTCC+AGG + chr7_3:30384908-30384927 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG - chr7_3:30384917-30384936 Msa1100490:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 30384656 30387030 30384656 ID=Msa1100490;Name=Msa1100490
chr7_3 mRNA 30384656 30387030 30384656 ID=Msa1100490-mRNA-1;Parent=Msa1100490;Name=Msa1100490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=150|1|1|1|1|1|3|473|322
chr7_3 exon 30384656 30385834 30384656 ID=Msa1100490-mRNA-1:exon:6451;Parent=Msa1100490-mRNA-1
chr7_3 exon 30386350 30386479 30386350 ID=Msa1100490-mRNA-1:exon:6450;Parent=Msa1100490-mRNA-1
chr7_3 exon 30386748 30387030 30386748 ID=Msa1100490-mRNA-1:exon:6449;Parent=Msa1100490-mRNA-1
chr7_3 five_prime_UTR 30386881 30387030 30386881 ID=Msa1100490-mRNA-1:five_prime_utr;Parent=Msa1100490-mRNA-1
chr7_3 CDS 30386748 30386880 30386748 ID=Msa1100490-mRNA-1:cds;Parent=Msa1100490-mRNA-1
chr7_3 CDS 30386350 30386479 30386350 ID=Msa1100490-mRNA-1:cds;Parent=Msa1100490-mRNA-1
chr7_3 CDS 30385129 30385834 30385129 ID=Msa1100490-mRNA-1:cds;Parent=Msa1100490-mRNA-1
chr7_3 three_prime_UTR 30384656 30385128 30384656 ID=Msa1100490-mRNA-1:three_prime_utr;Parent=Msa1100490-mRNA-1
Gene Sequence

>Msa1100490

ATGGGAAGACCACCTTGTTGTGACAAAGAAGGTGTTAAAAAAGGACCATGGACTCCTGAAGAAGATATCATACTTGTTACTTATATACAAGAACATGGTCCTGGAAATTGGAGGGCTGTTCCAACCAAGACAGGGTTGTCAAGATGCAGCAAAAGTTGCAGACTTAGATGGACTAATTACCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATTATCCATCTTCAAGATCTTTTAGGAAATAGATGGGCTGCAATAGCATCATACCTTCCACAAAGAACAGATAATGACATAAAAAACTATTGGAATACTCATTTGAAAAAGAAGCTCAAGAAATCACAAACAGGTAATAATGCTGAATGCATTAATTTTGAAGAAGAAAAATTTTCAGCATCTCAAAGAATTCCAAGAGGTCAATGGGAAAGAAGACTTCAAACAGATATTCAAATGGCCAAAAAAGCACTTAATGAAGCACTTTCACCACAAAAATTATCTTCTAATTTTTCTACTTCAAACCCTACAAATAGTAACTCATTTTCTTCCACTAAAGAACCAGGTCAATCTTTTTGCTATGCTTCAAGTGCAGATAACATAGCTCGTTTACTAAAAGGTTGGATGAAAAATCCAATCAAATCATCGGTTAGTACTAATTCTGCTGTGACACAAAATTCCTTCAACAACTTTGATTCTGCTTCTAGTAGTGGAACAAAGGGTGAAATATTGTCTGAAACATTTGAATCTTTGTTTGGTTTTGAGCCTTTGGAATCATCAAATTCTGAATTCTCTCGTCAATCTTTGTCACCAGATGCAACTGTTTTACAAGATGAAAGTAAGCCTGATGTTGGTTCGGAAACAATGCCCTTTTCTTTGCTTGAGAAATGGCTTCTTGATGAAGCAAGTTGTCCTGAAAAAGTATTAGGTTGTGCTGGTGATCATGCTCAAGTTTTCTAG
Protein sequence

>Msa1100490

MGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQTGNNAECINFEEEKFSASQRIPRGQWERRLQTDIQMAKKALNEALSPQKLSSNFSTSNPTNSNSFSSTKEPGQSFCYASSADNIARLLKGWMKNPIKSSVSTNSAVTQNSFNNFDSASSSGTKGEILSETFESLFGFEPLESSNSEFSRQSLSPDATVLQDESKPDVGSETMPFSLLEKWLLDEASCPEKVLGCAGDHAQVF*