Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017070 | XP_003590182.1 | 92.308 | 78 | 6 | 0 | 1 | 78 | 1 | 78 | 7.71e-46 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0017070 | 0.806007 | 1.013563e-49 | -8.615850e-47 |
| Msa0011170 | Msa0017070 | 0.804699 | 1.905492e-49 | -8.615850e-47 |
| Msa0012060 | Msa0017070 | 0.803698 | 3.078459e-49 | -8.615850e-47 |
| Msa0017070 | Msa0017510 | 0.820041 | 8.458261e-53 | -8.615850e-47 |
| Msa0017070 | Msa0023840 | -0.809013 | 2.334178e-50 | -8.615850e-47 |
| Msa0017070 | Msa0039330 | 0.820179 | 7.861878e-53 | -8.615850e-47 |
| Msa0017070 | Msa0044260 | 0.803389 | 3.568518e-49 | -8.615850e-47 |
| Msa0017070 | Msa0050380 | 0.812783 | 3.563217e-51 | -8.615850e-47 |
| Msa0017070 | Msa0063880 | 0.806533 | 7.855753e-50 | -8.615850e-47 |
| Msa0017070 | Msa0095560 | 0.803047 | 4.200327e-49 | -8.615850e-47 |
| Msa0017070 | Msa0105070 | 0.823975 | 1.037141e-53 | -8.615850e-47 |
| Msa0017070 | Msa0107580 | 0.805310 | 1.419761e-49 | -8.615850e-47 |
| Msa0017070 | Msa0109900 | 0.800172 | 1.632207e-48 | -8.615850e-47 |
| Msa0017070 | Msa0117710 | 0.800833 | 1.197135e-48 | -8.615850e-47 |
| Msa0017070 | Msa0119960 | 0.803295 | 3.731570e-49 | -8.615850e-47 |
| Msa0017070 | Msa0122590 | 0.802633 | 5.113230e-49 | -8.615850e-47 |
| Msa0017070 | Msa0131770 | 0.817667 | 2.928851e-52 | -8.615850e-47 |
| Msa0017070 | Msa0142220 | 0.811566 | 6.567472e-51 | -8.615850e-47 |
| Msa0017070 | Msa0143560 | 0.808940 | 2.419046e-50 | -8.615850e-47 |
| Msa0017070 | Msa0153910 | 0.803502 | 3.380973e-49 | -8.615850e-47 |
| Msa0017070 | Msa0157290 | 0.820192 | 7.808407e-53 | -8.615850e-47 |
| Msa0017070 | Msa0161900 | 0.801929 | 7.140381e-49 | -8.615850e-47 |
| Msa0017070 | Msa0166870 | 0.821943 | 3.085802e-53 | -8.615850e-47 |
| Msa0017070 | Msa0170230 | 0.811224 | 7.790097e-51 | -8.615850e-47 |
| Msa0017070 | Msa0175390 | 0.800135 | 1.660730e-48 | -8.615850e-47 |
| Msa0017070 | Msa0178930 | 0.833280 | 5.840741e-56 | -8.615850e-47 |
| Msa0017070 | Msa0188460 | 0.807962 | 3.911191e-50 | -8.615850e-47 |
| Msa0017070 | Msa0188830 | 0.817895 | 2.600392e-52 | -8.615850e-47 |
| Msa0017070 | Msa0198910 | 0.805593 | 1.238495e-49 | -8.615850e-47 |
| Msa0017070 | Msa0201070 | 0.806994 | 6.277745e-50 | -8.615850e-47 |
| Msa0017070 | Msa0206790 | 0.803186 | 3.931114e-49 | -8.615850e-47 |
| Msa0017070 | Msa0212990 | 0.816011 | 6.889429e-52 | -8.615850e-47 |
| Msa0017070 | Msa0215320 | -0.806922 | 6.500446e-50 | -8.615850e-47 |
| Msa0017070 | Msa0220580 | 0.825189 | 5.369850e-54 | -8.615850e-47 |
| Msa0017070 | Msa0222890 | 0.804039 | 2.615667e-49 | -8.615850e-47 |
| Msa0017070 | Msa0223010 | 0.812843 | 3.457167e-51 | -8.615850e-47 |
| Msa0017070 | Msa0233300 | 0.841949 | 3.483834e-58 | -8.615850e-47 |
| Msa0017070 | Msa0243710 | 0.812130 | 4.949208e-51 | -8.615850e-47 |
| Msa0017070 | Msa0251320 | 0.809070 | 2.268888e-50 | -8.615850e-47 |
| Msa0017070 | Msa0251640 | 0.804214 | 2.405195e-49 | -8.615850e-47 |
| Msa0017070 | Msa0255550 | 0.801120 | 1.045951e-48 | -8.615850e-47 |
| Msa0017070 | Msa0258760 | 0.811367 | 7.252803e-51 | -8.615850e-47 |
| Msa0017070 | Msa0262510 | 0.805068 | 1.595309e-49 | -8.615850e-47 |
| Msa0017070 | Msa0270100 | 0.802498 | 5.451645e-49 | -8.615850e-47 |
| Msa0017070 | Msa0270520 | 0.807056 | 6.089311e-50 | -8.615850e-47 |
| Msa0017070 | Msa0273100 | 0.805929 | 1.052812e-49 | -8.615850e-47 |
| Msa0017070 | Msa0281930 | 0.800747 | 1.246751e-48 | -8.615850e-47 |
| Msa0017070 | Msa0288100 | 0.830501 | 2.834255e-55 | -8.615850e-47 |
| Msa0017070 | Msa0292930 | 0.801344 | 9.413345e-49 | -8.615850e-47 |
| Msa0017070 | Msa0305190 | 0.818665 | 1.741275e-52 | -8.615850e-47 |
| Msa0017070 | Msa0307540 | 0.810470 | 1.134721e-50 | -8.615850e-47 |
| Msa0017070 | Msa0309020 | 0.814284 | 1.666256e-51 | -8.615850e-47 |
| Msa0017070 | Msa0319170 | 0.814945 | 1.189552e-51 | -8.615850e-47 |
| Msa0017070 | Msa0326520 | 0.812399 | 4.323424e-51 | -8.615850e-47 |
| Msa0017070 | Msa0330340 | 0.813135 | 2.983897e-51 | -8.615850e-47 |
| Msa0017070 | Msa0339620 | 0.814683 | 1.359955e-51 | -8.615850e-47 |
| Msa0017070 | Msa0340450 | 0.817266 | 3.605806e-52 | -8.615850e-47 |
| Msa0017070 | Msa0344690 | -0.826125 | 3.221016e-54 | -8.615850e-47 |
| Msa0017070 | Msa0344980 | 0.808815 | 2.572565e-50 | -8.615850e-47 |
| Msa0017070 | Msa0350990 | 0.822592 | 2.181879e-53 | -8.615850e-47 |
| Msa0017070 | Msa0351030 | 0.816718 | 4.787160e-52 | -8.615850e-47 |
| Msa0017070 | Msa0351100 | 0.810527 | 1.102999e-50 | -8.615850e-47 |
| Msa0017070 | Msa0355220 | 0.816822 | 4.535720e-52 | -8.615850e-47 |
| Msa0017070 | Msa0357340 | 0.821572 | 3.759862e-53 | -8.615850e-47 |
| Msa0017070 | Msa0363790 | 0.803633 | 3.176349e-49 | -8.615850e-47 |
| Msa0017070 | Msa0371730 | 0.811438 | 7.002652e-51 | -8.615850e-47 |
| Msa0017070 | Msa0376590 | 0.809864 | 1.532620e-50 | -8.615850e-47 |
| Msa0017070 | Msa0379640 | 0.807692 | 4.465059e-50 | -8.615850e-47 |
| Msa0017070 | Msa0385840 | 0.814897 | 1.218936e-51 | -8.615850e-47 |
| Msa0017070 | Msa0388960 | 0.812930 | 3.308608e-51 | -8.615850e-47 |
| Msa0017070 | Msa0391430 | 0.804780 | 1.833146e-49 | -8.615850e-47 |
| Msa0017070 | Msa0402290 | 0.816996 | 4.146250e-52 | -8.615850e-47 |
| Msa0017070 | Msa0406880 | 0.803048 | 4.198462e-49 | -8.615850e-47 |
| Msa0017070 | Msa0430420 | 0.802012 | 6.863494e-49 | -8.615850e-47 |
| Msa0017070 | Msa0431690 | 0.816045 | 6.770346e-52 | -8.615850e-47 |
| Msa0017070 | Msa0455040 | 0.809900 | 1.505153e-50 | -8.615850e-47 |
| Msa0017070 | Msa0466120 | 0.810646 | 1.039121e-50 | -8.615850e-47 |
| Msa0017070 | Msa0469160 | 0.802207 | 6.260572e-49 | -8.615850e-47 |
| Msa0017070 | Msa0469940 | -0.811462 | 6.918041e-51 | -8.615850e-47 |
| Msa0017070 | Msa0479340 | 0.806906 | 6.550193e-50 | -8.615850e-47 |
| Msa0017070 | Msa0484780 | 0.841132 | 5.719311e-58 | -8.615850e-47 |
| Msa0017070 | Msa0512750 | 0.810733 | 9.952258e-51 | -8.615850e-47 |
| Msa0017070 | Msa0512900 | 0.838036 | 3.651017e-57 | -8.615850e-47 |
| Msa0017070 | Msa0518380 | 0.809033 | 2.311260e-50 | -8.615850e-47 |
| Msa0017070 | Msa0532350 | 0.824816 | 6.576662e-54 | -8.615850e-47 |
| Msa0017070 | Msa0536220 | 0.801443 | 8.981022e-49 | -8.615850e-47 |
| Msa0017070 | Msa0558690 | 0.810497 | 1.119091e-50 | -8.615850e-47 |
| Msa0017070 | Msa0562440 | 0.817695 | 2.885525e-52 | -8.615850e-47 |
| Msa0017070 | Msa0563840 | 0.811102 | 8.281820e-51 | -8.615850e-47 |
| Msa0017070 | Msa0565350 | 0.828053 | 1.113379e-54 | -8.615850e-47 |
| Msa0017070 | Msa0565450 | 0.805610 | 1.228375e-49 | -8.615850e-47 |
| Msa0017070 | Msa0575700 | 0.804599 | 1.999623e-49 | -8.615850e-47 |
| Msa0017070 | Msa0580000 | 0.805058 | 1.603327e-49 | -8.615850e-47 |
| Msa0017070 | Msa0585230 | 0.828585 | 8.284988e-55 | -8.615850e-47 |
| Msa0017070 | Msa0610430 | 0.800877 | 1.172827e-48 | -8.615850e-47 |
| Msa0017070 | Msa0617640 | 0.803190 | 3.924025e-49 | -8.615850e-47 |
| Msa0017070 | Msa0620960 | 0.807581 | 4.714605e-50 | -8.615850e-47 |
| Msa0017070 | Msa0622650 | 0.805432 | 1.338937e-49 | -8.615850e-47 |
| Msa0017070 | Msa0626090 | 0.813261 | 2.799737e-51 | -8.615850e-47 |
| Msa0017070 | Msa0633700 | 0.808123 | 3.614307e-50 | -8.615850e-47 |
| Msa0017070 | Msa0644840 | 0.800534 | 1.377768e-48 | -8.615850e-47 |
| Msa0017070 | Msa0652940 | 0.806644 | 7.440867e-50 | -8.615850e-47 |
| Msa0017070 | Msa0657970 | 0.824389 | 8.287205e-54 | -8.615850e-47 |
| Msa0017070 | Msa0659400 | 0.814660 | 1.376104e-51 | -8.615850e-47 |
| Msa0017070 | Msa0661650 | 0.814102 | 1.828064e-51 | -8.615850e-47 |
| Msa0017070 | Msa0663240 | 0.809935 | 1.479357e-50 | -8.615850e-47 |
| Msa0017070 | Msa0663380 | 0.815167 | 1.061948e-51 | -8.615850e-47 |
| Msa0017070 | Msa0672690 | 0.834496 | 2.898536e-56 | -8.615850e-47 |
| Msa0017070 | Msa0673460 | 0.821566 | 3.771523e-53 | -8.615850e-47 |
| Msa0017070 | Msa0688070 | 0.805456 | 1.323064e-49 | -8.615850e-47 |
| Msa0017070 | Msa0688270 | 0.806942 | 6.438525e-50 | -8.615850e-47 |
| Msa0017070 | Msa0688480 | 0.804941 | 1.695877e-49 | -8.615850e-47 |
| Msa0017070 | Msa0689800 | 0.802306 | 5.973052e-49 | -8.615850e-47 |
| Msa0017070 | Msa0690440 | 0.806122 | 9.586315e-50 | -8.615850e-47 |
| Msa0017070 | Msa0693380 | 0.834081 | 3.684027e-56 | -8.615850e-47 |
| Msa0017070 | Msa0697060 | 0.803109 | 4.077449e-49 | -8.615850e-47 |
| Msa0017070 | Msa0701900 | 0.802141 | 6.457863e-49 | -8.615850e-47 |
| Msa0017070 | Msa0716530 | 0.818723 | 1.689394e-52 | -8.615850e-47 |
| Msa0017070 | Msa0716840 | 0.800757 | 1.240651e-48 | -8.615850e-47 |
| Msa0017070 | Msa0724210 | 0.804467 | 2.130606e-49 | -8.615850e-47 |
| Msa0017070 | Msa0731940 | 0.809052 | 2.289802e-50 | -8.615850e-47 |
| Msa0017070 | Msa0735170 | 0.842873 | 1.981684e-58 | -8.615850e-47 |
| Msa0017070 | Msa0745790 | 0.814173 | 1.763052e-51 | -8.615850e-47 |
| Msa0017070 | Msa0753720 | 0.807870 | 4.092348e-50 | -8.615850e-47 |
| Msa0017070 | Msa0760130 | 0.803535 | 3.328210e-49 | -8.615850e-47 |
| Msa0017070 | Msa0762360 | 0.811110 | 8.248383e-51 | -8.615850e-47 |
| Msa0017070 | Msa0766630 | 0.850267 | 1.895956e-60 | -8.615850e-47 |
| Msa0017070 | Msa0768370 | 0.801243 | 9.872474e-49 | -8.615850e-47 |
| Msa0017070 | Msa0777230 | 0.800062 | 1.718689e-48 | -8.615850e-47 |
| Msa0017070 | Msa0790510 | 0.824219 | 9.085551e-54 | -8.615850e-47 |
| Msa0017070 | Msa0792540 | 0.806633 | 7.481224e-50 | -8.615850e-47 |
| Msa0017070 | Msa0807030 | 0.814454 | 1.527968e-51 | -8.615850e-47 |
| Msa0017070 | Msa0810220 | 0.817259 | 3.617919e-52 | -8.615850e-47 |
| Msa0017070 | Msa0813400 | 0.811389 | 7.175334e-51 | -8.615850e-47 |
| Msa0017070 | Msa0817460 | 0.804739 | 1.869640e-49 | -8.615850e-47 |
| Msa0017070 | Msa0820850 | 0.801028 | 1.092230e-48 | -8.615850e-47 |
| Msa0017070 | Msa0828850 | 0.813211 | 2.871461e-51 | -8.615850e-47 |
| Msa0017070 | Msa0831850 | 0.814850 | 1.248780e-51 | -8.615850e-47 |
| Msa0017070 | Msa0832150 | 0.801416 | 9.099948e-49 | -8.615850e-47 |
| Msa0017070 | Msa0832340 | 0.811047 | 8.508917e-51 | -8.615850e-47 |
| Msa0017070 | Msa0843260 | 0.819167 | 1.338609e-52 | -8.615850e-47 |
| Msa0017070 | Msa0849030 | 0.805468 | 1.315385e-49 | -8.615850e-47 |
| Msa0017070 | Msa0861130 | 0.807842 | 4.147807e-50 | -8.615850e-47 |
| Msa0017070 | Msa0861540 | 0.822101 | 2.836761e-53 | -8.615850e-47 |
| Msa0017070 | Msa0880140 | 0.814746 | 1.316966e-51 | -8.615850e-47 |
| Msa0017070 | Msa0885280 | 0.811155 | 8.066156e-51 | -8.615850e-47 |
| Msa0017070 | Msa0897880 | 0.808007 | 3.825843e-50 | -8.615850e-47 |
| Msa0017070 | Msa0900620 | 0.800656 | 1.300788e-48 | -8.615850e-47 |
| Msa0017070 | Msa0907070 | 0.833996 | 3.869057e-56 | -8.615850e-47 |
| Msa0017070 | Msa0909120 | 0.806378 | 8.468964e-50 | -8.615850e-47 |
| Msa0017070 | Msa0922330 | 0.830302 | 3.170057e-55 | -8.615850e-47 |
| Msa0017070 | Msa0922410 | 0.811793 | 5.861955e-51 | -8.615850e-47 |
| Msa0017070 | Msa0922720 | 0.800766 | 1.235358e-48 | -8.615850e-47 |
| Msa0017070 | Msa0927290 | 0.802968 | 4.360951e-49 | -8.615850e-47 |
| Msa0017070 | Msa0927380 | 0.816546 | 5.229766e-52 | -8.615850e-47 |
| Msa0017070 | Msa0931520 | 0.807979 | 3.879917e-50 | -8.615850e-47 |
| Msa0017070 | Msa0933100 | 0.822460 | 2.341506e-53 | -8.615850e-47 |
| Msa0017070 | Msa0935410 | 0.800369 | 1.488924e-48 | -8.615850e-47 |
| Msa0017070 | Msa0935910 | 0.822087 | 2.857748e-53 | -8.615850e-47 |
| Msa0017070 | Msa0936300 | 0.807198 | 5.681519e-50 | -8.615850e-47 |
| Msa0017070 | Msa0942200 | 0.810550 | 1.090028e-50 | -8.615850e-47 |
| Msa0017070 | Msa0947660 | 0.814581 | 1.432687e-51 | -8.615850e-47 |
| Msa0017070 | Msa0954130 | 0.808101 | 3.654158e-50 | -8.615850e-47 |
| Msa0017070 | Msa0954550 | 0.808062 | 3.723823e-50 | -8.615850e-47 |
| Msa0017070 | Msa0954910 | 0.810016 | 1.421343e-50 | -8.615850e-47 |
| Msa0017070 | Msa0964900 | 0.800508 | 1.394537e-48 | -8.615850e-47 |
| Msa0017070 | Msa0969520 | 0.832547 | 8.885044e-56 | -8.615850e-47 |
| Msa0017070 | Msa0973100 | 0.801290 | 9.655531e-49 | -8.615850e-47 |
| Msa0017070 | Msa0975220 | 0.813092 | 3.048324e-51 | -8.615850e-47 |
| Msa0017070 | Msa0976670 | 0.807177 | 5.742156e-50 | -8.615850e-47 |
| Msa0017070 | Msa0983090 | 0.810093 | 1.368224e-50 | -8.615850e-47 |
| Msa0017070 | Msa0989360 | 0.811872 | 5.632686e-51 | -8.615850e-47 |
| Msa0017070 | Msa0998690 | 0.804254 | 2.359136e-49 | -8.615850e-47 |
| Msa0017070 | Msa0999100 | 0.817317 | 3.511898e-52 | -8.615850e-47 |
| Msa0017070 | Msa1000900 | 0.809434 | 1.896176e-50 | -8.615850e-47 |
| Msa0017070 | Msa1002850 | 0.801181 | 1.016449e-48 | -8.615850e-47 |
| Msa0017070 | Msa1014540 | 0.840171 | 1.021122e-57 | -8.615850e-47 |
| Msa0017070 | Msa1036610 | 0.810126 | 1.345849e-50 | -8.615850e-47 |
| Msa0017070 | Msa1054990 | 0.814716 | 1.337344e-51 | -8.615850e-47 |
| Msa0017070 | Msa1059570 | 0.808223 | 3.441251e-50 | -8.615850e-47 |
| Msa0017070 | Msa1075220 | -0.839705 | 1.350415e-57 | -8.615850e-47 |
| Msa0017070 | Msa1075650 | 0.828622 | 8.114498e-55 | -8.615850e-47 |
| Msa0017070 | Msa1079430 | 0.803907 | 2.785994e-49 | -8.615850e-47 |
| Msa0017070 | Msa1081590 | 0.831950 | 1.247864e-55 | -8.615850e-47 |
| Msa0017070 | Msa1082500 | 0.837821 | 4.145066e-57 | -8.615850e-47 |
| Msa0017070 | Msa1082580 | 0.801618 | 8.272359e-49 | -8.615850e-47 |
| Msa0017070 | Msa1090260 | 0.807845 | 4.143152e-50 | -8.615850e-47 |
| Msa0017070 | Msa1116130 | -0.814161 | 1.773400e-51 | -8.615850e-47 |
| Msa0017070 | Msa1116260 | 0.800024 | 1.749593e-48 | -8.615850e-47 |
| Msa0017070 | Msa1119480 | 0.805641 | 1.210439e-49 | -8.615850e-47 |
| Msa0017070 | Msa1121490 | 0.825948 | 3.547460e-54 | -8.615850e-47 |
| Msa0017070 | Msa1137570 | 0.823744 | 1.174467e-53 | -8.615850e-47 |
| Msa0017070 | Msa1139000 | -0.822350 | 2.483530e-53 | -8.615850e-47 |
| Msa0017070 | Msa1154280 | 0.806806 | 6.877211e-50 | -8.615850e-47 |
| Msa0017070 | Msa1162550 | -0.847713 | 9.713894e-60 | -8.615850e-47 |
| Msa0017070 | Msa1162780 | 0.809773 | 1.603101e-50 | -8.615850e-47 |
| Msa0017070 | Msa1179770 | 0.805520 | 1.283155e-49 | -8.615850e-47 |
| Msa0017070 | Msa1207220 | 0.809477 | 1.855652e-50 | -8.615850e-47 |
| Msa0017070 | Msa1224480 | 0.804451 | 2.146532e-49 | -8.615850e-47 |
| Msa0017070 | Msa1228590 | 0.820264 | 7.520848e-53 | -8.615850e-47 |
| Msa0017070 | Msa1233890 | 0.827407 | 1.591245e-54 | -8.615850e-47 |
| Msa0017070 | Msa1246510 | 0.809595 | 1.750610e-50 | -8.615850e-47 |
| Msa0017070 | Msa1249490 | 0.818641 | 1.762652e-52 | -8.615850e-47 |
| Msa0017070 | Msa1250890 | 0.800418 | 1.454702e-48 | -8.615850e-47 |
| Msa0017070 | Msa1276440 | 0.821098 | 4.835672e-53 | -8.615850e-47 |
| Msa0017070 | Msa1277660 | 0.811188 | 7.932602e-51 | -8.615850e-47 |
| Msa0017070 | Msa1283860 | 0.803026 | 4.241780e-49 | -8.615850e-47 |
| Msa0017070 | Msa1284680 | 0.831852 | 1.319702e-55 | -8.615850e-47 |
| Msa0017070 | Msa1291850 | 0.811674 | 6.219525e-51 | -8.615850e-47 |
| Msa0017070 | Msa1297290 | 0.821512 | 3.881384e-53 | -8.615850e-47 |
| Msa0017070 | Msa1305340 | 0.807963 | 3.910744e-50 | -8.615850e-47 |
| Msa0017070 | Msa1313150 | 0.803916 | 2.774702e-49 | -8.615850e-47 |
| Msa0017070 | Msa1314340 | 0.820270 | 7.494221e-53 | -8.615850e-47 |
| Msa0017070 | Msa1329700 | 0.806964 | 6.370517e-50 | -8.615850e-47 |
| Msa0017070 | Msa1331000 | 0.810784 | 9.703032e-51 | -8.615850e-47 |
| Msa0017070 | Msa1331320 | 0.802879 | 4.549612e-49 | -8.615850e-47 |
| Msa0017070 | Msa1342840 | 0.807043 | 6.129144e-50 | -8.615850e-47 |
| Msa0017070 | Msa1343760 | 0.815360 | 9.618953e-52 | -8.615850e-47 |
| Msa0017070 | Msa1353470 | 0.839712 | 1.345080e-57 | -8.615850e-47 |
| Msa0017070 | Msa1359040 | 0.818874 | 1.560838e-52 | -8.615850e-47 |
| Msa0017070 | Msa1362880 | 0.802071 | 6.674391e-49 | -8.615850e-47 |
| Msa0017070 | Msa1372760 | 0.810909 | 9.118039e-51 | -8.615850e-47 |
| Msa0017070 | Msa1373030 | 0.814964 | 1.177852e-51 | -8.615850e-47 |
| Msa0017070 | Msa1378940 | 0.804383 | 2.217948e-49 | -8.615850e-47 |
| Msa0017070 | Msa1384350 | 0.800232 | 1.587468e-48 | -8.615850e-47 |
| Msa0017070 | Msa1385000 | 0.819950 | 8.874756e-53 | -8.615850e-47 |
| Msa0017070 | Msa1390050 | 0.805494 | 1.299284e-49 | -8.615850e-47 |
| Msa0017070 | Msa1392260 | 0.828786 | 7.408800e-55 | -8.615850e-47 |
| Msa0017070 | Msa1397860 | 0.813865 | 2.061736e-51 | -8.615850e-47 |
| Msa0017070 | Msa1403480 | 0.818120 | 2.313993e-52 | -8.615850e-47 |
| Msa0017070 | Msa1409880 | 0.805927 | 1.053678e-49 | -8.615850e-47 |
| Msa0017070 | Msa1411020 | 0.827387 | 1.609036e-54 | -8.615850e-47 |
| Msa0017070 | Msa1419960 | 0.831673 | 1.460752e-55 | -8.615850e-47 |
| Msa0017070 | Msa1420290 | 0.808313 | 3.292970e-50 | -8.615850e-47 |
| Msa0017070 | Msa1420490 | 0.811401 | 7.131640e-51 | -8.615850e-47 |
| Msa0017070 | Msa1420820 | 0.811729 | 6.053160e-51 | -8.615850e-47 |
| Msa0017070 | Msa1423390 | 0.808217 | 3.452304e-50 | -8.615850e-47 |
| Msa0017070 | Msa1423880 | 0.818785 | 1.635449e-52 | -8.615850e-47 |
| Msa0017070 | Msa1424290 | 0.819136 | 1.360561e-52 | -8.615850e-47 |
| Msa0017070 | Msa1427230 | 0.822079 | 2.869795e-53 | -8.615850e-47 |
| Msa0017070 | Msa1429900 | 0.806398 | 8.385909e-50 | -8.615850e-47 |
| Msa0017070 | Msa1434350 | 0.819063 | 1.413488e-52 | -8.615850e-47 |
| Msa0017070 | Msa1435270 | 0.807690 | 4.469211e-50 | -8.615850e-47 |
| Msa0017070 | Msa1439320 | 0.821258 | 4.443781e-53 | -8.615850e-47 |
| Msa0017070 | Msa1440370 | 0.811692 | 6.164047e-51 | -8.615850e-47 |
| Msa0017070 | Msa1440810 | 0.805890 | 1.072732e-49 | -8.615850e-47 |
| Msa0017070 | Msa1451570 | 0.800744 | 1.248197e-48 | -8.615850e-47 |
| Msa0017070 | Msa1451620 | -0.826829 | 2.188326e-54 | -8.615850e-47 |
| Msa0017070 | Msa1460050 | 0.816507 | 5.336873e-52 | -8.615850e-47 |
| Msa0017070 | Msa1460830 | 0.813487 | 2.496495e-51 | -8.615850e-47 |
| Msa0017070 | Msa1466540 | 0.826903 | 2.100998e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017070 | MtrunA17_Chr1g0168671 | 92.308 | 78 | 6 | 0 | 1 | 78 | 1 | 78 | 7.09e-50 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017070 | AT1G04555.1 | 52.778 | 72 | 34 | 0 | 7 | 78 | 5 | 76 | 9.07e-19 | 75.1 |
Find 16 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCTATCTTCCTTCTTCA+TGG | 0.243652 | 1_1:+28307693 | Msa0017070:CDS |
| TAGAATTTGGTACGGGTGTA+AGG | 0.326954 | 1_1:-28307732 | None:intergenic |
| TTCCTTTATGTAACTGAGTT+CGG | 0.363823 | 1_1:-28309668 | None:intergenic |
| AGCCGAACTCAGTTACATAA+AGG | 0.475710 | 1_1:+28309666 | Msa0017070:intron |
| AAGAATGGTTGCGTTCTTGA+AGG | 0.492469 | 1_1:-28307649 | None:intergenic |
| TCGTCTTGCCATGTTACCAT+TGG | 0.509525 | 1_1:+28309702 | Msa0017070:CDS |
| TGAAGAAGAAGCCATGAAGA+AGG | 0.521047 | 1_1:-28307704 | None:intergenic |
| TTCAGAGTAGAATTTGGTAC+GGG | 0.526994 | 1_1:-28307739 | None:intergenic |
| AGATAGCAGTGATAATATTG+AGG | 0.541867 | 1_1:-28307680 | None:intergenic |
| TATTAGTTCCAATGGTAACA+TGG | 0.549852 | 1_1:-28309710 | None:intergenic |
| TACTCTGAAAACACCAACTC+AGG | 0.557029 | 1_1:+28307753 | Msa0017070:CDS |
| TTTCAGAGTAGAATTTGGTA+CGG | 0.560240 | 1_1:-28307740 | None:intergenic |
| ATTGAGGAAACAGACAAGAA+TGG | 0.578784 | 1_1:-28307664 | None:intergenic |
| GAGGGGTAACCAACCTGAGT+TGG | 0.581042 | 1_1:-28307766 | None:intergenic |
| AAATGGAGGTACAACAATGG+TGG | 0.615958 | 1_1:+28307613 | Msa0017070:exon |
| TTTGGTACGGGTGTAAGGAG+AGG | 0.625789 | 1_1:-28307727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATGTATAAATTTATG+AGG | - | chr1_1:28307811-28307830 | None:intergenic | 10.0% |
| !! | ATAAAATGTATAAATTTATG+AGG | - | chr1_1:28307811-28307830 | None:intergenic | 10.0% |
| !!! | AAATTATGTCTTTGTTTTTT+TGG | + | chr1_1:28307915-28307934 | Msa0017070:intron | 15.0% |
| !!! | AATTATGTCTTTGTTTTTTT+GGG | + | chr1_1:28307916-28307935 | Msa0017070:intron | 15.0% |
| !! | TGACTCAAAAAAAAAAAAAA+AGG | + | chr1_1:28309034-28309053 | Msa0017070:intron | 15.0% |
| !!! | AAATTATGTCTTTGTTTTTT+TGG | + | chr1_1:28307915-28307934 | Msa0017070:intron | 15.0% |
| !!! | AATTATGTCTTTGTTTTTTT+GGG | + | chr1_1:28307916-28307935 | Msa0017070:intron | 15.0% |
| !! | TGACTCAAAAAAAAAAAAAA+AGG | + | chr1_1:28309034-28309053 | Msa0017070:intron | 15.0% |
| !!! | CATTTTTTTGTTATGATTGA+AGG | - | chr1_1:28307598-28307617 | None:intergenic | 20.0% |
| !! | CTTCAATCATAACAAAAAAA+TGG | + | chr1_1:28307596-28307615 | Msa0017070:exon | 20.0% |
| !! | TATAACTTGAAATCAATCAT+GGG | + | chr1_1:28307835-28307854 | Msa0017070:intron | 20.0% |
| !!! | GAATTTTGATTGCTAATTAT+TGG | + | chr1_1:28308208-28308227 | Msa0017070:intron | 20.0% |
| !! | TATAAAAGATGATACAAACT+TGG | + | chr1_1:28308586-28308605 | Msa0017070:intron | 20.0% |
| !!! | TTTTATGTTATTAGAGAGAA+AGG | + | chr1_1:28308816-28308835 | Msa0017070:intron | 20.0% |
| !!! | CATTTTTTTGTTATGATTGA+AGG | - | chr1_1:28307598-28307617 | None:intergenic | 20.0% |
| !! | CTTCAATCATAACAAAAAAA+TGG | + | chr1_1:28307596-28307615 | Msa0017070:exon | 20.0% |
| !! | TATAACTTGAAATCAATCAT+GGG | + | chr1_1:28307835-28307854 | Msa0017070:intron | 20.0% |
| !!! | GAATTTTGATTGCTAATTAT+TGG | + | chr1_1:28308208-28308227 | Msa0017070:intron | 20.0% |
| !! | TATAAAAGATGATACAAACT+TGG | + | chr1_1:28308586-28308605 | Msa0017070:intron | 20.0% |
| !!! | TTTTATGTTATTAGAGAGAA+AGG | + | chr1_1:28308816-28308835 | Msa0017070:intron | 20.0% |
| ! | CAATCATAACAAAAAAATGG+AGG | + | chr1_1:28307599-28307618 | Msa0017070:exon | 25.0% |
| !!! | CATGATTGATTTCAAGTTAT+AGG | - | chr1_1:28307836-28307855 | None:intergenic | 25.0% |
| ! | CTATAACTTGAAATCAATCA+TGG | + | chr1_1:28307834-28307853 | Msa0017070:intron | 25.0% |
| !!! | AGTGAGTTTTTTTTTCCTTT+TGG | + | chr1_1:28307887-28307906 | Msa0017070:intron | 25.0% |
| !!! | GTGAGTTTTTTTTTCCTTTT+GGG | + | chr1_1:28307888-28307907 | Msa0017070:intron | 25.0% |
| !!! | TGAGTTTTTTTTTCCTTTTG+GGG | + | chr1_1:28307889-28307908 | Msa0017070:intron | 25.0% |
| ! | ATTTGATTATGAGGTAAATG+AGG | + | chr1_1:28307941-28307960 | Msa0017070:intron | 25.0% |
| ! | TTGTTAGATTCTGATTTACT+AGG | + | chr1_1:28308015-28308034 | Msa0017070:intron | 25.0% |
| ! | TACAATACACCAAAAATGAT+GGG | - | chr1_1:28308336-28308355 | None:intergenic | 25.0% |
| ! | ATACAATACACCAAAAATGA+TGG | - | chr1_1:28308337-28308356 | None:intergenic | 25.0% |
| !!! | ATTCTATCATTTCTAGTCTT+AGG | - | chr1_1:28308526-28308545 | None:intergenic | 25.0% |
| ! | AAATGAAAATATCAGAGAGT+TGG | + | chr1_1:28308549-28308568 | Msa0017070:intron | 25.0% |
| ! | AATGAAAATATCAGAGAGTT+GGG | + | chr1_1:28308550-28308569 | Msa0017070:intron | 25.0% |
| ! | GATTCTGTGTTATCAAATAT+CGG | + | chr1_1:28308877-28308896 | Msa0017070:intron | 25.0% |
| ! | AAAGGAGAAAATAACATTAG+AGG | + | chr1_1:28309052-28309071 | Msa0017070:intron | 25.0% |
| ! | TCATTTATCTGATTGAAGTT+TGG | + | chr1_1:28309255-28309274 | Msa0017070:intron | 25.0% |
| ! | TATTTAACTCATAGTATGCT+TGG | + | chr1_1:28309289-28309308 | Msa0017070:intron | 25.0% |
| ! | GCAAGTTTAACAAATACTTT+AGG | - | chr1_1:28309620-28309639 | None:intergenic | 25.0% |
| !! | ACTCTTTTTATTAGTTCCAA+TGG | - | chr1_1:28309721-28309740 | None:intergenic | 25.0% |
| ! | CAATCATAACAAAAAAATGG+AGG | + | chr1_1:28307599-28307618 | Msa0017070:exon | 25.0% |
| !!! | CATGATTGATTTCAAGTTAT+AGG | - | chr1_1:28307836-28307855 | None:intergenic | 25.0% |
| ! | CTATAACTTGAAATCAATCA+TGG | + | chr1_1:28307834-28307853 | Msa0017070:intron | 25.0% |
| !!! | AGTGAGTTTTTTTTTCCTTT+TGG | + | chr1_1:28307887-28307906 | Msa0017070:intron | 25.0% |
| !!! | GTGAGTTTTTTTTTCCTTTT+GGG | + | chr1_1:28307888-28307907 | Msa0017070:intron | 25.0% |
| !!! | TGAGTTTTTTTTTCCTTTTG+GGG | + | chr1_1:28307889-28307908 | Msa0017070:intron | 25.0% |
| ! | ATTTGATTATGAGGTAAATG+AGG | + | chr1_1:28307941-28307960 | Msa0017070:intron | 25.0% |
| ! | TTGTTAGATTCTGATTTACT+AGG | + | chr1_1:28308015-28308034 | Msa0017070:intron | 25.0% |
| ! | TACAATACACCAAAAATGAT+GGG | - | chr1_1:28308336-28308355 | None:intergenic | 25.0% |
| ! | ATACAATACACCAAAAATGA+TGG | - | chr1_1:28308337-28308356 | None:intergenic | 25.0% |
| !!! | ATTCTATCATTTCTAGTCTT+AGG | - | chr1_1:28308526-28308545 | None:intergenic | 25.0% |
| ! | AAATGAAAATATCAGAGAGT+TGG | + | chr1_1:28308549-28308568 | Msa0017070:intron | 25.0% |
| ! | AATGAAAATATCAGAGAGTT+GGG | + | chr1_1:28308550-28308569 | Msa0017070:intron | 25.0% |
| ! | GATTCTGTGTTATCAAATAT+CGG | + | chr1_1:28308877-28308896 | Msa0017070:intron | 25.0% |
| ! | AAAGGAGAAAATAACATTAG+AGG | + | chr1_1:28309052-28309071 | Msa0017070:intron | 25.0% |
| ! | TCATTTATCTGATTGAAGTT+TGG | + | chr1_1:28309255-28309274 | Msa0017070:intron | 25.0% |
| ! | TATTTAACTCATAGTATGCT+TGG | + | chr1_1:28309289-28309308 | Msa0017070:intron | 25.0% |
| ! | GCAAGTTTAACAAATACTTT+AGG | - | chr1_1:28309620-28309639 | None:intergenic | 25.0% |
| !! | ACTCTTTTTATTAGTTCCAA+TGG | - | chr1_1:28309721-28309740 | None:intergenic | 25.0% |
| ! | AAAAAATGGAGGTACAACAA+TGG | + | chr1_1:28307610-28307629 | Msa0017070:exon | 30.0% |
| AGATAGCAGTGATAATATTG+AGG | - | chr1_1:28307683-28307702 | None:intergenic | 30.0% | |
| TTTCAGAGTAGAATTTGGTA+CGG | - | chr1_1:28307743-28307762 | None:intergenic | 30.0% | |
| !! | TTTTGGGTGATTTGATTATG+AGG | + | chr1_1:28307932-28307951 | Msa0017070:intron | 30.0% |
| ATAGTCACTAGCATTTAAGT+TGG | - | chr1_1:28308081-28308100 | None:intergenic | 30.0% | |
| TGCTAGTGACTATTTGTATT+TGG | + | chr1_1:28308088-28308107 | Msa0017070:intron | 30.0% | |
| TTAGGATTGTGAATTTGAGT+TGG | + | chr1_1:28308124-28308143 | Msa0017070:intron | 30.0% | |
| !! | ATTGTGAATTTGAGTTGGAT+TGG | + | chr1_1:28308129-28308148 | Msa0017070:intron | 30.0% |
| ACATGAGAGTAATTAAACAG+TGG | + | chr1_1:28308474-28308493 | Msa0017070:intron | 30.0% | |
| ATGAAAATATCAGAGAGTTG+GGG | + | chr1_1:28308551-28308570 | Msa0017070:intron | 30.0% | |
| AGATGATACAAACTTGGTTT+AGG | + | chr1_1:28308592-28308611 | Msa0017070:intron | 30.0% | |
| CTTAGTTTAAGTGATGAAGT+TGG | + | chr1_1:28308747-28308766 | Msa0017070:intron | 30.0% | |
| ! | TTATGAATGACGTTTTGTGA+CGG | + | chr1_1:28308959-28308978 | Msa0017070:intron | 30.0% |
| !!! | TTTTTTTTGAGTCATGACAG+TGG | - | chr1_1:28309028-28309047 | None:intergenic | 30.0% |
| AACATTAGAGGATCAAAATC+TGG | + | chr1_1:28309064-28309083 | Msa0017070:intron | 30.0% | |
| ACATTAGAGGATCAAAATCT+GGG | + | chr1_1:28309065-28309084 | Msa0017070:intron | 30.0% | |
| AAGATCATGGAACAATCATA+AGG | + | chr1_1:28309103-28309122 | Msa0017070:intron | 30.0% | |
| TAACACACAGCATATTTGTT+AGG | + | chr1_1:28309160-28309179 | Msa0017070:intron | 30.0% | |
| TGAAAGACAAGAATTAGAGA+AGG | - | chr1_1:28309238-28309257 | None:intergenic | 30.0% | |
| TTTATCTGATTGAAGTTTGG+AGG | + | chr1_1:28309258-28309277 | Msa0017070:intron | 30.0% | |
| ! | ACATAACAGGTAAAGCATTT+CGG | - | chr1_1:28309353-28309372 | None:intergenic | 30.0% |
| ATGCTTTACCTGTTATGTAT+AGG | + | chr1_1:28309355-28309374 | Msa0017070:intron | 30.0% | |
| TTCTCAATCCTATACATAAC+AGG | - | chr1_1:28309366-28309385 | None:intergenic | 30.0% | |
| TTCCTTTATGTAACTGAGTT+CGG | - | chr1_1:28309671-28309690 | None:intergenic | 30.0% | |
| TATTAGTTCCAATGGTAACA+TGG | - | chr1_1:28309713-28309732 | None:intergenic | 30.0% | |
| ! | AAAAAATGGAGGTACAACAA+TGG | + | chr1_1:28307610-28307629 | Msa0017070:exon | 30.0% |
| AGATAGCAGTGATAATATTG+AGG | - | chr1_1:28307683-28307702 | None:intergenic | 30.0% | |
| TTTCAGAGTAGAATTTGGTA+CGG | - | chr1_1:28307743-28307762 | None:intergenic | 30.0% | |
| !! | TTTTGGGTGATTTGATTATG+AGG | + | chr1_1:28307932-28307951 | Msa0017070:intron | 30.0% |
| ATAGTCACTAGCATTTAAGT+TGG | - | chr1_1:28308081-28308100 | None:intergenic | 30.0% | |
| TGCTAGTGACTATTTGTATT+TGG | + | chr1_1:28308088-28308107 | Msa0017070:intron | 30.0% | |
| TTAGGATTGTGAATTTGAGT+TGG | + | chr1_1:28308124-28308143 | Msa0017070:intron | 30.0% | |
| !! | ATTGTGAATTTGAGTTGGAT+TGG | + | chr1_1:28308129-28308148 | Msa0017070:intron | 30.0% |
| ACATGAGAGTAATTAAACAG+TGG | + | chr1_1:28308474-28308493 | Msa0017070:intron | 30.0% | |
| ATGAAAATATCAGAGAGTTG+GGG | + | chr1_1:28308551-28308570 | Msa0017070:intron | 30.0% | |
| AGATGATACAAACTTGGTTT+AGG | + | chr1_1:28308592-28308611 | Msa0017070:intron | 30.0% | |
| CTTAGTTTAAGTGATGAAGT+TGG | + | chr1_1:28308747-28308766 | Msa0017070:intron | 30.0% | |
| ! | TTATGAATGACGTTTTGTGA+CGG | + | chr1_1:28308959-28308978 | Msa0017070:intron | 30.0% |
| !!! | TTTTTTTTGAGTCATGACAG+TGG | - | chr1_1:28309028-28309047 | None:intergenic | 30.0% |
| AACATTAGAGGATCAAAATC+TGG | + | chr1_1:28309064-28309083 | Msa0017070:intron | 30.0% | |
| ACATTAGAGGATCAAAATCT+GGG | + | chr1_1:28309065-28309084 | Msa0017070:intron | 30.0% | |
| AAGATCATGGAACAATCATA+AGG | + | chr1_1:28309103-28309122 | Msa0017070:intron | 30.0% | |
| TAACACACAGCATATTTGTT+AGG | + | chr1_1:28309160-28309179 | Msa0017070:intron | 30.0% | |
| TGAAAGACAAGAATTAGAGA+AGG | - | chr1_1:28309238-28309257 | None:intergenic | 30.0% | |
| TTTATCTGATTGAAGTTTGG+AGG | + | chr1_1:28309258-28309277 | Msa0017070:intron | 30.0% | |
| ! | ACATAACAGGTAAAGCATTT+CGG | - | chr1_1:28309353-28309372 | None:intergenic | 30.0% |
| ATGCTTTACCTGTTATGTAT+AGG | + | chr1_1:28309355-28309374 | Msa0017070:intron | 30.0% | |
| TTCTCAATCCTATACATAAC+AGG | - | chr1_1:28309366-28309385 | None:intergenic | 30.0% | |
| TTCCTTTATGTAACTGAGTT+CGG | - | chr1_1:28309671-28309690 | None:intergenic | 30.0% | |
| TATTAGTTCCAATGGTAACA+TGG | - | chr1_1:28309713-28309732 | None:intergenic | 30.0% | |
| ATTGAGGAAACAGACAAGAA+TGG | - | chr1_1:28307667-28307686 | None:intergenic | 35.0% | |
| TTCAGAGTAGAATTTGGTAC+GGG | - | chr1_1:28307742-28307761 | None:intergenic | 35.0% | |
| ! | GGTGTTTTCAGAGTAGAATT+TGG | - | chr1_1:28307748-28307767 | None:intergenic | 35.0% |
| AAAACAGAGATAGAGGAAGA+GGG | - | chr1_1:28307787-28307806 | None:intergenic | 35.0% | |
| AAAAACAGAGATAGAGGAAG+AGG | - | chr1_1:28307788-28307807 | None:intergenic | 35.0% | |
| ATGAGGAAAAACAGAGATAG+AGG | - | chr1_1:28307794-28307813 | None:intergenic | 35.0% | |
| ! | GACATAATTTTCACCCCAAA+AGG | - | chr1_1:28307905-28307924 | None:intergenic | 35.0% |
| !! | TTTGGTGCTTCTTAGACTTT+AGG | + | chr1_1:28308106-28308125 | Msa0017070:intron | 35.0% |
| TCATGTTAGTTCGATATCGA+GGG | - | chr1_1:28308460-28308479 | None:intergenic | 35.0% | |
| TGATACAAACTTGGTTTAGG+TGG | + | chr1_1:28308595-28308614 | Msa0017070:intron | 35.0% | |
| AAACTTGGTTTAGGTGGTTT+GGG | + | chr1_1:28308601-28308620 | Msa0017070:intron | 35.0% | |
| AGAAGACTCGTAGATTATGA+CGG | + | chr1_1:28308633-28308652 | Msa0017070:intron | 35.0% | |
| AGTGACTAATGTGTTGGATT+TGG | + | chr1_1:28308774-28308793 | Msa0017070:intron | 35.0% | |
| CGTCATTCATAAATTGTCCA+TGG | - | chr1_1:28308951-28308970 | None:intergenic | 35.0% | |
| TGTTCCATGATCTTGCATTA+TGG | - | chr1_1:28309097-28309116 | None:intergenic | 35.0% | |
| ! | GGTAAAGCATTTCGGATAAT+TGG | - | chr1_1:28309345-28309364 | None:intergenic | 35.0% |
| ATTGAGGAAACAGACAAGAA+TGG | - | chr1_1:28307667-28307686 | None:intergenic | 35.0% | |
| TTCAGAGTAGAATTTGGTAC+GGG | - | chr1_1:28307742-28307761 | None:intergenic | 35.0% | |
| ! | GGTGTTTTCAGAGTAGAATT+TGG | - | chr1_1:28307748-28307767 | None:intergenic | 35.0% |
| AAAACAGAGATAGAGGAAGA+GGG | - | chr1_1:28307787-28307806 | None:intergenic | 35.0% | |
| AAAAACAGAGATAGAGGAAG+AGG | - | chr1_1:28307788-28307807 | None:intergenic | 35.0% | |
| ATGAGGAAAAACAGAGATAG+AGG | - | chr1_1:28307794-28307813 | None:intergenic | 35.0% | |
| ! | GACATAATTTTCACCCCAAA+AGG | - | chr1_1:28307905-28307924 | None:intergenic | 35.0% |
| !! | TTTGGTGCTTCTTAGACTTT+AGG | + | chr1_1:28308106-28308125 | Msa0017070:intron | 35.0% |
| TCATGTTAGTTCGATATCGA+GGG | - | chr1_1:28308460-28308479 | None:intergenic | 35.0% | |
| TGATACAAACTTGGTTTAGG+TGG | + | chr1_1:28308595-28308614 | Msa0017070:intron | 35.0% | |
| AAACTTGGTTTAGGTGGTTT+GGG | + | chr1_1:28308601-28308620 | Msa0017070:intron | 35.0% | |
| AGAAGACTCGTAGATTATGA+CGG | + | chr1_1:28308633-28308652 | Msa0017070:intron | 35.0% | |
| AGTGACTAATGTGTTGGATT+TGG | + | chr1_1:28308774-28308793 | Msa0017070:intron | 35.0% | |
| CGTCATTCATAAATTGTCCA+TGG | - | chr1_1:28308951-28308970 | None:intergenic | 35.0% | |
| TGTTCCATGATCTTGCATTA+TGG | - | chr1_1:28309097-28309116 | None:intergenic | 35.0% | |
| ! | GGTAAAGCATTTCGGATAAT+TGG | - | chr1_1:28309345-28309364 | None:intergenic | 35.0% |
| ! | AAATGGAGGTACAACAATGG+TGG | + | chr1_1:28307613-28307632 | Msa0017070:exon | 40.0% |
| AAGAATGGTTGCGTTCTTGA+AGG | - | chr1_1:28307652-28307671 | None:intergenic | 40.0% | |
| ACTGCTATCTTCCTTCTTCA+TGG | + | chr1_1:28307693-28307712 | Msa0017070:CDS | 40.0% | |
| TGAAGAAGAAGCCATGAAGA+AGG | - | chr1_1:28307707-28307726 | None:intergenic | 40.0% | |
| TAGAATTTGGTACGGGTGTA+AGG | - | chr1_1:28307735-28307754 | None:intergenic | 40.0% | |
| ! | TACTCTGAAAACACCAACTC+AGG | + | chr1_1:28307753-28307772 | Msa0017070:CDS | 40.0% |
| AAACAGAGATAGAGGAAGAG+GGG | - | chr1_1:28307786-28307805 | None:intergenic | 40.0% | |
| ! | TGTTTGCTACGACAAAGTGT+TGG | + | chr1_1:28308249-28308268 | Msa0017070:intron | 40.0% |
| ! | GTTTGCTACGACAAAGTGTT+GGG | + | chr1_1:28308250-28308269 | Msa0017070:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1_1:28308415-28308434 | None:intergenic | 40.0% | |
| CTCATGTTAGTTCGATATCG+AGG | - | chr1_1:28308461-28308480 | None:intergenic | 40.0% | |
| ! | TGGTGATGAGAATGTTGTGT+TGG | + | chr1_1:28308494-28308513 | Msa0017070:intron | 40.0% |
| CAAACTTGGTTTAGGTGGTT+TGG | + | chr1_1:28308600-28308619 | Msa0017070:intron | 40.0% | |
| ! | AGTTTTCTCAGATCAGCTTG+TGG | + | chr1_1:28308719-28308738 | Msa0017070:intron | 40.0% |
| ! | GTTTTCTCAGATCAGCTTGT+GGG | + | chr1_1:28308720-28308739 | Msa0017070:intron | 40.0% |
| GGAACTAGTGACTAATGTGT+TGG | + | chr1_1:28308768-28308787 | Msa0017070:intron | 40.0% | |
| GTGTTATCAAATATCGGCCA+TGG | + | chr1_1:28308883-28308902 | Msa0017070:intron | 40.0% | |
| TTATCAAATATCGGCCATGG+TGG | + | chr1_1:28308886-28308905 | Msa0017070:intron | 40.0% | |
| AAAAGTTTCGACAACTGCCA+TGG | + | chr1_1:28308931-28308950 | Msa0017070:intron | 40.0% | |
| !!! | ATGACGTTTTGTGACGGATA+TGG | + | chr1_1:28308965-28308984 | Msa0017070:intron | 40.0% |
| TTTGAGTCATGACAGTGGAA+TGG | - | chr1_1:28309023-28309042 | None:intergenic | 40.0% | |
| CAGACCATAATGCAAGATCA+TGG | + | chr1_1:28309090-28309109 | Msa0017070:intron | 40.0% | |
| ! | GAAGCTTTGATACCAATGCA+AGG | + | chr1_1:28309317-28309336 | Msa0017070:intron | 40.0% |
| ! | GGATAATTGGTTCCTTGCAT+TGG | - | chr1_1:28309332-28309351 | None:intergenic | 40.0% |
| AGCCGAACTCAGTTACATAA+AGG | + | chr1_1:28309666-28309685 | Msa0017070:intron | 40.0% | |
| ! | AAATGGAGGTACAACAATGG+TGG | + | chr1_1:28307613-28307632 | Msa0017070:exon | 40.0% |
| AAGAATGGTTGCGTTCTTGA+AGG | - | chr1_1:28307652-28307671 | None:intergenic | 40.0% | |
| ACTGCTATCTTCCTTCTTCA+TGG | + | chr1_1:28307693-28307712 | Msa0017070:CDS | 40.0% | |
| TGAAGAAGAAGCCATGAAGA+AGG | - | chr1_1:28307707-28307726 | None:intergenic | 40.0% | |
| TAGAATTTGGTACGGGTGTA+AGG | - | chr1_1:28307735-28307754 | None:intergenic | 40.0% | |
| ! | TACTCTGAAAACACCAACTC+AGG | + | chr1_1:28307753-28307772 | Msa0017070:CDS | 40.0% |
| AAACAGAGATAGAGGAAGAG+GGG | - | chr1_1:28307786-28307805 | None:intergenic | 40.0% | |
| ! | TGTTTGCTACGACAAAGTGT+TGG | + | chr1_1:28308249-28308268 | Msa0017070:intron | 40.0% |
| ! | GTTTGCTACGACAAAGTGTT+GGG | + | chr1_1:28308250-28308269 | Msa0017070:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1_1:28308415-28308434 | None:intergenic | 40.0% | |
| CTCATGTTAGTTCGATATCG+AGG | - | chr1_1:28308461-28308480 | None:intergenic | 40.0% | |
| ! | TGGTGATGAGAATGTTGTGT+TGG | + | chr1_1:28308494-28308513 | Msa0017070:intron | 40.0% |
| CAAACTTGGTTTAGGTGGTT+TGG | + | chr1_1:28308600-28308619 | Msa0017070:intron | 40.0% | |
| ! | AGTTTTCTCAGATCAGCTTG+TGG | + | chr1_1:28308719-28308738 | Msa0017070:intron | 40.0% |
| ! | GTTTTCTCAGATCAGCTTGT+GGG | + | chr1_1:28308720-28308739 | Msa0017070:intron | 40.0% |
| GGAACTAGTGACTAATGTGT+TGG | + | chr1_1:28308768-28308787 | Msa0017070:intron | 40.0% | |
| GTGTTATCAAATATCGGCCA+TGG | + | chr1_1:28308883-28308902 | Msa0017070:intron | 40.0% | |
| TTATCAAATATCGGCCATGG+TGG | + | chr1_1:28308886-28308905 | Msa0017070:intron | 40.0% | |
| AAAAGTTTCGACAACTGCCA+TGG | + | chr1_1:28308931-28308950 | Msa0017070:intron | 40.0% | |
| !!! | ATGACGTTTTGTGACGGATA+TGG | + | chr1_1:28308965-28308984 | Msa0017070:intron | 40.0% |
| TTTGAGTCATGACAGTGGAA+TGG | - | chr1_1:28309023-28309042 | None:intergenic | 40.0% | |
| CAGACCATAATGCAAGATCA+TGG | + | chr1_1:28309090-28309109 | Msa0017070:intron | 40.0% | |
| ! | GAAGCTTTGATACCAATGCA+AGG | + | chr1_1:28309317-28309336 | Msa0017070:intron | 40.0% |
| ! | GGATAATTGGTTCCTTGCAT+TGG | - | chr1_1:28309332-28309351 | None:intergenic | 40.0% |
| AGCCGAACTCAGTTACATAA+AGG | + | chr1_1:28309666-28309685 | Msa0017070:intron | 40.0% | |
| CTGAAAACACCAACTCAGGT+TGG | + | chr1_1:28307757-28307776 | Msa0017070:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr1_1:28308408-28308427 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1_1:28308409-28308428 | None:intergenic | 45.0% | |
| TTCGATATCGAGGGTAACCT+TGG | - | chr1_1:28308451-28308470 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGAG+GGG | - | chr1_1:28308679-28308698 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGA+GGG | - | chr1_1:28308680-28308699 | None:intergenic | 45.0% |
| AGTCATGACAGTGGAATGGA+AGG | - | chr1_1:28309019-28309038 | None:intergenic | 45.0% | |
| TCGTCTTGCCATGTTACCAT+TGG | + | chr1_1:28309702-28309721 | Msa0017070:CDS | 45.0% | |
| CTGAAAACACCAACTCAGGT+TGG | + | chr1_1:28307757-28307776 | Msa0017070:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr1_1:28308408-28308427 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1_1:28308409-28308428 | None:intergenic | 45.0% | |
| TTCGATATCGAGGGTAACCT+TGG | - | chr1_1:28308451-28308470 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGAG+GGG | - | chr1_1:28308679-28308698 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGA+GGG | - | chr1_1:28308680-28308699 | None:intergenic | 45.0% |
| AGTCATGACAGTGGAATGGA+AGG | - | chr1_1:28309019-28309038 | None:intergenic | 45.0% | |
| TCGTCTTGCCATGTTACCAT+TGG | + | chr1_1:28309702-28309721 | Msa0017070:CDS | 45.0% | |
| TTTGGTACGGGTGTAAGGAG+AGG | - | chr1_1:28307730-28307749 | None:intergenic | 50.0% | |
| ! | AAAATGATGGGACCCCTTCC+CGG | - | chr1_1:28308324-28308343 | None:intergenic | 50.0% |
| ! | GGAAGGGGTCCCATCATTTT+TGG | + | chr1_1:28308324-28308343 | Msa0017070:intron | 50.0% |
| CTTGCGTCATACACAGGGTA+AGG | - | chr1_1:28308364-28308383 | None:intergenic | 50.0% | |
| TACCCTGTGTATGACGCAAG+AGG | + | chr1_1:28308364-28308383 | Msa0017070:intron | 50.0% | |
| AGCCTCTTGCGTCATACACA+GGG | - | chr1_1:28308369-28308388 | None:intergenic | 50.0% | |
| TAGCCTCTTGCGTCATACAC+AGG | - | chr1_1:28308370-28308389 | None:intergenic | 50.0% | |
| CATGTGACTGAAAGGTCACG+GGG | - | chr1_1:28308407-28308426 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr1_1:28308431-28308450 | Msa0017070:intron | 50.0% | |
| !! | ACTAAGAGGGGTTGGCTTGA+TGG | - | chr1_1:28308667-28308686 | None:intergenic | 50.0% |
| ATCAAGCCAACCCCTCTTAG+TGG | + | chr1_1:28308666-28308685 | Msa0017070:intron | 50.0% | |
| TCAAGCCAACCCCTCTTAGT+GGG | + | chr1_1:28308667-28308686 | Msa0017070:intron | 50.0% | |
| CTTATCCCACTAAGAGGGGT+TGG | - | chr1_1:28308675-28308694 | None:intergenic | 50.0% | |
| CAACCCCTCTTAGTGGGATA+AGG | + | chr1_1:28308673-28308692 | Msa0017070:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+AGG | - | chr1_1:28308681-28308700 | None:intergenic | 50.0% |
| CCTCTTAGTGGGATAAGGCT+TGG | + | chr1_1:28308678-28308697 | Msa0017070:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | + | chr1_1:28308681-28308700 | Msa0017070:intron | 50.0% | |
| TTCTCAGATCAGCTTGTGGG+TGG | + | chr1_1:28308723-28308742 | Msa0017070:intron | 50.0% | |
| TTTGCCACAACAATCCGCCA+TGG | - | chr1_1:28308914-28308933 | None:intergenic | 50.0% | |
| TTTGGTACGGGTGTAAGGAG+AGG | - | chr1_1:28307730-28307749 | None:intergenic | 50.0% | |
| ! | AAAATGATGGGACCCCTTCC+CGG | - | chr1_1:28308324-28308343 | None:intergenic | 50.0% |
| ! | GGAAGGGGTCCCATCATTTT+TGG | + | chr1_1:28308324-28308343 | Msa0017070:intron | 50.0% |
| CTTGCGTCATACACAGGGTA+AGG | - | chr1_1:28308364-28308383 | None:intergenic | 50.0% | |
| TACCCTGTGTATGACGCAAG+AGG | + | chr1_1:28308364-28308383 | Msa0017070:intron | 50.0% | |
| AGCCTCTTGCGTCATACACA+GGG | - | chr1_1:28308369-28308388 | None:intergenic | 50.0% | |
| TAGCCTCTTGCGTCATACAC+AGG | - | chr1_1:28308370-28308389 | None:intergenic | 50.0% | |
| CATGTGACTGAAAGGTCACG+GGG | - | chr1_1:28308407-28308426 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr1_1:28308431-28308450 | Msa0017070:intron | 50.0% | |
| !! | ACTAAGAGGGGTTGGCTTGA+TGG | - | chr1_1:28308667-28308686 | None:intergenic | 50.0% |
| ATCAAGCCAACCCCTCTTAG+TGG | + | chr1_1:28308666-28308685 | Msa0017070:intron | 50.0% | |
| TCAAGCCAACCCCTCTTAGT+GGG | + | chr1_1:28308667-28308686 | Msa0017070:intron | 50.0% | |
| CTTATCCCACTAAGAGGGGT+TGG | - | chr1_1:28308675-28308694 | None:intergenic | 50.0% | |
| CAACCCCTCTTAGTGGGATA+AGG | + | chr1_1:28308673-28308692 | Msa0017070:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+AGG | - | chr1_1:28308681-28308700 | None:intergenic | 50.0% |
| CCTCTTAGTGGGATAAGGCT+TGG | + | chr1_1:28308678-28308697 | Msa0017070:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | + | chr1_1:28308681-28308700 | Msa0017070:intron | 50.0% | |
| TTCTCAGATCAGCTTGTGGG+TGG | + | chr1_1:28308723-28308742 | Msa0017070:intron | 50.0% | |
| TTTGCCACAACAATCCGCCA+TGG | - | chr1_1:28308914-28308933 | None:intergenic | 50.0% | |
| GAGGGGTAACCAACCTGAGT+TGG | - | chr1_1:28307769-28307788 | None:intergenic | 55.0% | |
| ! | TGCGGGAGCTTTAGTGCACT+GGG | - | chr1_1:28308291-28308310 | None:intergenic | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+TGG | - | chr1_1:28308292-28308311 | None:intergenic | 55.0% |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1_1:28308296-28308315 | Msa0017070:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1_1:28308297-28308316 | Msa0017070:intron | 55.0% | |
| AAGGTCACGGGGTCAAGTCT+TGG | - | chr1_1:28308396-28308415 | None:intergenic | 55.0% | |
| ! | TATCGGCCATGGTGGAACCA+TGG | + | chr1_1:28308894-28308913 | Msa0017070:intron | 55.0% |
| AATCCGCCATGGTTCCACCA+TGG | - | chr1_1:28308903-28308922 | None:intergenic | 55.0% | |
| !! | GGAACCATGGCGGATTGTTG+TGG | + | chr1_1:28308907-28308926 | Msa0017070:intron | 55.0% |
| GAGGGGTAACCAACCTGAGT+TGG | - | chr1_1:28307769-28307788 | None:intergenic | 55.0% | |
| ! | TGCGGGAGCTTTAGTGCACT+GGG | - | chr1_1:28308291-28308310 | None:intergenic | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+TGG | - | chr1_1:28308292-28308311 | None:intergenic | 55.0% |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1_1:28308296-28308315 | Msa0017070:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1_1:28308297-28308316 | Msa0017070:intron | 55.0% | |
| AAGGTCACGGGGTCAAGTCT+TGG | - | chr1_1:28308396-28308415 | None:intergenic | 55.0% | |
| ! | TATCGGCCATGGTGGAACCA+TGG | + | chr1_1:28308894-28308913 | Msa0017070:intron | 55.0% |
| AATCCGCCATGGTTCCACCA+TGG | - | chr1_1:28308903-28308922 | None:intergenic | 55.0% | |
| !! | GGAACCATGGCGGATTGTTG+TGG | + | chr1_1:28308907-28308926 | Msa0017070:intron | 55.0% |
| ! | GCGGGAGCTTTAGTGCACTG+GGG | - | chr1_1:28308290-28308309 | None:intergenic | 60.0% |
| GAGGGTAACCTTGGCGCAAC+TGG | - | chr1_1:28308442-28308461 | None:intergenic | 60.0% | |
| ! | GCGGGAGCTTTAGTGCACTG+GGG | - | chr1_1:28308290-28308309 | None:intergenic | 60.0% |
| GAGGGTAACCTTGGCGCAAC+TGG | - | chr1_1:28308442-28308461 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1_1:28308308-28308327 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1_1:28308309-28308328 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1_1:28308308-28308327 | Msa0017070:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1_1:28308309-28308328 | Msa0017070:intron | 65.0% | |
| ! | CGGCCATGGTGGAACCATGG+CGG | + | chr1_1:28308897-28308916 | Msa0017070:intron | 65.0% |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1_1:28308308-28308327 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1_1:28308309-28308328 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1_1:28308308-28308327 | Msa0017070:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1_1:28308309-28308328 | Msa0017070:intron | 65.0% | |
| ! | CGGCCATGGTGGAACCATGG+CGG | + | chr1_1:28308897-28308916 | Msa0017070:intron | 65.0% |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_1:28308302-28308321 | Msa0017070:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_1:28308303-28308322 | Msa0017070:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1_1:28308307-28308326 | Msa0017070:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_1:28308302-28308321 | Msa0017070:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_1:28308303-28308322 | Msa0017070:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1_1:28308307-28308326 | Msa0017070:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 28307557 | 28309741 | 28307557 | ID=Msa0017070;Name=Msa0017070 |
| chr1_1 | mRNA | 28307557 | 28309741 | 28307557 | ID=Msa0017070-mRNA-1;Parent=Msa0017070;Name=Msa0017070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=58|1|0.5|1|0|0.5|2|0|78 |
| chr1_1 | exon | 28307557 | 28307774 | 28307557 | ID=Msa0017070-mRNA-1:exon:9468;Parent=Msa0017070-mRNA-1 |
| chr1_1 | exon | 28309668 | 28309741 | 28309668 | ID=Msa0017070-mRNA-1:exon:9469;Parent=Msa0017070-mRNA-1 |
| chr1_1 | five_prime_UTR | 28307557 | 28307614 | 28307557 | ID=Msa0017070-mRNA-1:five_prime_utr;Parent=Msa0017070-mRNA-1 |
| chr1_1 | CDS | 28307615 | 28307774 | 28307615 | ID=Msa0017070-mRNA-1:cds;Parent=Msa0017070-mRNA-1 |
| chr1_1 | CDS | 28309668 | 28309741 | 28309668 | ID=Msa0017070-mRNA-1:cds;Parent=Msa0017070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
