Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107320 | XP_003623166.1 | 91.667 | 96 | 8 | 0 | 1 | 96 | 1 | 96 | 1.58e-56 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107320 | G7L5L7 | 91.667 | 96 | 8 | 0 | 1 | 96 | 1 | 96 | 7.56e-57 | 181 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004990 | Msa1107320 | 0.801877 | 7.316518e-49 | -8.615850e-47 |
| Msa0017710 | Msa1107320 | 0.805833 | 1.103143e-49 | -8.615850e-47 |
| Msa0024650 | Msa1107320 | 0.815911 | 7.254366e-52 | -8.615850e-47 |
| Msa0025570 | Msa1107320 | 0.819378 | 1.198477e-52 | -8.615850e-47 |
| Msa0034100 | Msa1107320 | -0.832109 | 1.140557e-55 | -8.615850e-47 |
| Msa0036550 | Msa1107320 | 0.851448 | 8.818574e-61 | -8.615850e-47 |
| Msa0038010 | Msa1107320 | 0.818724 | 1.688245e-52 | -8.615850e-47 |
| Msa0041780 | Msa1107320 | -0.824469 | 7.934966e-54 | -8.615850e-47 |
| Msa0048380 | Msa1107320 | 0.802855 | 4.600969e-49 | -8.615850e-47 |
| Msa0081790 | Msa1107320 | -0.841040 | 6.045195e-58 | -8.615850e-47 |
| Msa0085710 | Msa1107320 | 0.836517 | 8.934045e-57 | -8.615850e-47 |
| Msa0092350 | Msa1107320 | 0.819662 | 1.032199e-52 | -8.615850e-47 |
| Msa0120450 | Msa1107320 | 0.812758 | 3.608852e-51 | -8.615850e-47 |
| Msa0623310 | Msa1107320 | 0.800874 | 1.174550e-48 | -8.615850e-47 |
| Msa0626980 | Msa1107320 | 0.812173 | 4.844553e-51 | -8.615850e-47 |
| Msa0627360 | Msa1107320 | 0.812496 | 4.118253e-51 | -8.615850e-47 |
| Msa0646230 | Msa1107320 | 0.809525 | 1.812844e-50 | -8.615850e-47 |
| Msa0659230 | Msa1107320 | 0.856830 | 2.467452e-62 | -8.615850e-47 |
| Msa0672780 | Msa1107320 | 0.805512 | 1.288152e-49 | -8.615850e-47 |
| Msa0673940 | Msa1107320 | 0.810650 | 1.037375e-50 | -8.615850e-47 |
| Msa0705210 | Msa1107320 | 0.802478 | 5.505588e-49 | -8.615850e-47 |
| Msa0708020 | Msa1107320 | 0.821240 | 4.486190e-53 | -8.615850e-47 |
| Msa0711240 | Msa1107320 | 0.822210 | 2.675435e-53 | -8.615850e-47 |
| Msa0716600 | Msa1107320 | 0.803420 | 3.516503e-49 | -8.615850e-47 |
| Msa0716980 | Msa1107320 | 0.816327 | 5.855628e-52 | -8.615850e-47 |
| Msa0730890 | Msa1107320 | 0.801909 | 7.208475e-49 | -8.615850e-47 |
| Msa0732970 | Msa1107320 | 0.813593 | 2.366490e-51 | -8.615850e-47 |
| Msa0756670 | Msa1107320 | -0.811961 | 5.388716e-51 | -8.615850e-47 |
| Msa0763350 | Msa1107320 | -0.821772 | 3.380217e-53 | -8.615850e-47 |
| Msa0774360 | Msa1107320 | -0.802333 | 5.897226e-49 | -8.615850e-47 |
| Msa0776340 | Msa1107320 | 0.802159 | 6.404270e-49 | -8.615850e-47 |
| Msa0776590 | Msa1107320 | -0.802052 | 6.736602e-49 | -8.615850e-47 |
| Msa0792410 | Msa1107320 | 0.827572 | 1.453186e-54 | -8.615850e-47 |
| Msa0797980 | Msa1107320 | -0.806195 | 9.254814e-50 | -8.615850e-47 |
| Msa0800120 | Msa1107320 | 0.813882 | 2.044319e-51 | -8.615850e-47 |
| Msa0800150 | Msa1107320 | 0.821908 | 3.144006e-53 | -8.615850e-47 |
| Msa0812020 | Msa1107320 | -0.802865 | 4.580324e-49 | -8.615850e-47 |
| Msa0813840 | Msa1107320 | 0.806838 | 6.773127e-50 | -8.615850e-47 |
| Msa0817100 | Msa1107320 | 0.811645 | 6.312946e-51 | -8.615850e-47 |
| Msa0836060 | Msa1107320 | -0.814853 | 1.246802e-51 | -8.615850e-47 |
| Msa0838210 | Msa1107320 | 0.805720 | 1.164752e-49 | -8.615850e-47 |
| Msa0121320 | Msa1107320 | 0.825655 | 4.164170e-54 | -8.615850e-47 |
| Msa0128110 | Msa1107320 | -0.834131 | 3.579378e-56 | -8.615850e-47 |
| Msa0129270 | Msa1107320 | 0.804197 | 2.425020e-49 | -8.615850e-47 |
| Msa0130360 | Msa1107320 | 0.809195 | 2.133389e-50 | -8.615850e-47 |
| Msa0130710 | Msa1107320 | 0.833323 | 5.697952e-56 | -8.615850e-47 |
| Msa0132250 | Msa1107320 | 0.809484 | 1.849500e-50 | -8.615850e-47 |
| Msa0136090 | Msa1107320 | 0.806273 | 8.913256e-50 | -8.615850e-47 |
| Msa0136180 | Msa1107320 | -0.831831 | 1.335726e-55 | -8.615850e-47 |
| Msa0139850 | Msa1107320 | 0.821485 | 3.937584e-53 | -8.615850e-47 |
| Msa0163690 | Msa1107320 | 0.828562 | 8.391254e-55 | -8.615850e-47 |
| Msa0166180 | Msa1107320 | 0.818927 | 1.518528e-52 | -8.615850e-47 |
| Msa0171740 | Msa1107320 | 0.802656 | 5.059016e-49 | -8.615850e-47 |
| Msa0175060 | Msa1107320 | 0.821612 | 3.680416e-53 | -8.615850e-47 |
| Msa0176600 | Msa1107320 | 0.823930 | 1.062098e-53 | -8.615850e-47 |
| Msa0186510 | Msa1107320 | -0.806189 | 9.280282e-50 | -8.615850e-47 |
| Msa0188560 | Msa1107320 | 0.804344 | 2.260216e-49 | -8.615850e-47 |
| Msa0202650 | Msa1107320 | 0.802558 | 5.298862e-49 | -8.615850e-47 |
| Msa0211460 | Msa1107320 | 0.801028 | 1.092333e-48 | -8.615850e-47 |
| Msa0218060 | Msa1107320 | 0.812560 | 3.988007e-51 | -8.615850e-47 |
| Msa0219840 | Msa1107320 | 0.812987 | 3.214318e-51 | -8.615850e-47 |
| Msa0225920 | Msa1107320 | 0.809169 | 2.161069e-50 | -8.615850e-47 |
| Msa0230920 | Msa1107320 | 0.818452 | 1.946139e-52 | -8.615850e-47 |
| Msa0234130 | Msa1107320 | 0.812535 | 4.038325e-51 | -8.615850e-47 |
| Msa0238110 | Msa1107320 | 0.800724 | 1.260239e-48 | -8.615850e-47 |
| Msa0370620 | Msa1107320 | 0.809982 | 1.445488e-50 | -8.615850e-47 |
| Msa0375550 | Msa1107320 | 0.837872 | 4.022037e-57 | -8.615850e-47 |
| Msa0385770 | Msa1107320 | -0.804470 | 2.127704e-49 | -8.615850e-47 |
| Msa0424240 | Msa1107320 | 0.825468 | 4.610680e-54 | -8.615850e-47 |
| Msa0424300 | Msa1107320 | 0.834772 | 2.470714e-56 | -8.615850e-47 |
| Msa0444400 | Msa1107320 | 0.801489 | 8.789289e-49 | -8.615850e-47 |
| Msa0449290 | Msa1107320 | 0.801551 | 8.535547e-49 | -8.615850e-47 |
| Msa0449380 | Msa1107320 | 0.812084 | 5.064333e-51 | -8.615850e-47 |
| Msa0477900 | Msa1107320 | 0.800712 | 1.267404e-48 | -8.615850e-47 |
| Msa0478400 | Msa1107320 | 0.823034 | 1.720858e-53 | -8.615850e-47 |
| Msa0987550 | Msa1107320 | 0.800329 | 1.516973e-48 | -8.615850e-47 |
| Msa0996990 | Msa1107320 | 0.806758 | 7.041116e-50 | -8.615850e-47 |
| Msa0999480 | Msa1107320 | -0.803806 | 2.924678e-49 | -8.615850e-47 |
| Msa1005370 | Msa1107320 | 0.813838 | 2.089935e-51 | -8.615850e-47 |
| Msa1006750 | Msa1107320 | 0.849925 | 2.364225e-60 | -8.615850e-47 |
| Msa1024310 | Msa1107320 | 0.802506 | 5.431821e-49 | -8.615850e-47 |
| Msa1024480 | Msa1107320 | 0.804063 | 2.585873e-49 | -8.615850e-47 |
| Msa1026490 | Msa1107320 | 0.809994 | 1.436579e-50 | -8.615850e-47 |
| Msa1029860 | Msa1107320 | 0.801275 | 9.721165e-49 | -8.615850e-47 |
| Msa1036590 | Msa1107320 | 0.816143 | 6.438409e-52 | -8.615850e-47 |
| Msa1040330 | Msa1107320 | 0.819018 | 1.447766e-52 | -8.615850e-47 |
| Msa1042300 | Msa1107320 | 0.800200 | 1.611193e-48 | -8.615850e-47 |
| Msa1047300 | Msa1107320 | 0.841030 | 6.081630e-58 | -8.615850e-47 |
| Msa1047340 | Msa1107320 | 0.841434 | 4.764442e-58 | -8.615850e-47 |
| Msa1061760 | Msa1107320 | 0.852479 | 4.494504e-61 | -8.615850e-47 |
| Msa1061780 | Msa1107320 | 0.908895 | 1.036227e-81 | -8.615850e-47 |
| Msa1061790 | Msa1107320 | 0.874621 | 5.854170e-68 | -8.615850e-47 |
| Msa1064940 | Msa1107320 | 0.809420 | 1.908615e-50 | -8.615850e-47 |
| Msa1074560 | Msa1107320 | 0.821690 | 3.530861e-53 | -8.615850e-47 |
| Msa1076280 | Msa1107320 | 0.811879 | 5.613864e-51 | -8.615850e-47 |
| Msa1076900 | Msa1107320 | 0.819899 | 9.114331e-53 | -8.615850e-47 |
| Msa1083100 | Msa1107320 | 0.814854 | 1.246401e-51 | -8.615850e-47 |
| Msa1085560 | Msa1107320 | 0.804583 | 2.015182e-49 | -8.615850e-47 |
| Msa1087380 | Msa1107320 | 0.806426 | 8.275673e-50 | -8.615850e-47 |
| Msa1103450 | Msa1107320 | 0.834787 | 2.449693e-56 | -8.615850e-47 |
| Msa0245660 | Msa1107320 | 0.822606 | 2.164923e-53 | -8.615850e-47 |
| Msa0258010 | Msa1107320 | 0.805976 | 1.029319e-49 | -8.615850e-47 |
| Msa0260980 | Msa1107320 | 0.801518 | 8.669640e-49 | -8.615850e-47 |
| Msa0267710 | Msa1107320 | 0.918607 | 1.263955e-86 | -8.615850e-47 |
| Msa0273360 | Msa1107320 | 0.809886 | 1.515634e-50 | -8.615850e-47 |
| Msa0307630 | Msa1107320 | 0.828165 | 1.046090e-54 | -8.615850e-47 |
| Msa0311540 | Msa1107320 | 0.810175 | 1.313486e-50 | -8.615850e-47 |
| Msa0318360 | Msa1107320 | 0.808839 | 2.542970e-50 | -8.615850e-47 |
| Msa0322460 | Msa1107320 | 0.801804 | 7.576284e-49 | -8.615850e-47 |
| Msa0335340 | Msa1107320 | 0.817892 | 2.605276e-52 | -8.615850e-47 |
| Msa0336430 | Msa1107320 | 0.808704 | 2.716917e-50 | -8.615850e-47 |
| Msa0336460 | Msa1107320 | 0.808433 | 3.104191e-50 | -8.615850e-47 |
| Msa0336520 | Msa1107320 | 0.827294 | 1.694194e-54 | -8.615850e-47 |
| Msa0356200 | Msa1107320 | 0.819302 | 1.247094e-52 | -8.615850e-47 |
| Msa0356240 | Msa1107320 | 0.834611 | 2.711535e-56 | -8.615850e-47 |
| Msa0356250 | Msa1107320 | 0.822896 | 1.853116e-53 | -8.615850e-47 |
| Msa0356270 | Msa1107320 | 0.843148 | 1.674468e-58 | -8.615850e-47 |
| Msa0356380 | Msa1107320 | 0.817254 | 3.627734e-52 | -8.615850e-47 |
| Msa0356410 | Msa1107320 | 0.818364 | 2.037137e-52 | -8.615850e-47 |
| Msa1107280 | Msa1107320 | 0.832436 | 9.463727e-56 | -8.615850e-47 |
| Msa1107310 | Msa1107320 | 0.865772 | 4.634283e-65 | -8.615850e-47 |
| Msa1107320 | Msa1107330 | 0.849723 | 2.691783e-60 | -8.615850e-47 |
| Msa1107320 | Msa1107520 | 0.803970 | 2.703873e-49 | -8.615850e-47 |
| Msa1107320 | Msa1111910 | 0.803015 | 4.263764e-49 | -8.615850e-47 |
| Msa1107320 | Msa1122550 | 0.809416 | 1.913145e-50 | -8.615850e-47 |
| Msa1107320 | Msa1127200 | 0.800089 | 1.697285e-48 | -8.615850e-47 |
| Msa1107320 | Msa1130770 | 0.812029 | 5.207422e-51 | -8.615850e-47 |
| Msa1107320 | Msa1140930 | 0.820558 | 6.435938e-53 | -8.615850e-47 |
| Msa1107320 | Msa1146980 | 0.817117 | 3.894137e-52 | -8.615850e-47 |
| Msa1107320 | Msa1147010 | 0.816361 | 5.754414e-52 | -8.615850e-47 |
| Msa1107320 | Msa1150860 | 0.910157 | 2.562876e-82 | -8.615850e-47 |
| Msa1107320 | Msa1150870 | 0.878168 | 3.491779e-69 | -8.615850e-47 |
| Msa1107320 | Msa1150880 | 0.880116 | 7.150811e-70 | -8.615850e-47 |
| Msa1107320 | Msa1156670 | 0.807369 | 5.227231e-50 | -8.615850e-47 |
| Msa1107320 | Msa1160540 | 0.815574 | 8.621539e-52 | -8.615850e-47 |
| Msa1107320 | Msa1173290 | 0.812813 | 3.510003e-51 | -8.615850e-47 |
| Msa1107320 | Msa1179190 | 0.811752 | 5.981962e-51 | -8.615850e-47 |
| Msa1107320 | Msa1184680 | 0.820507 | 6.611722e-53 | -8.615850e-47 |
| Msa1107320 | Msa1188490 | 0.805341 | 1.398766e-49 | -8.615850e-47 |
| Msa1107320 | Msa1190090 | 0.805691 | 1.181503e-49 | -8.615850e-47 |
| Msa1107320 | Msa1211160 | 0.827092 | 1.893172e-54 | -8.615850e-47 |
| Msa1107320 | Msa1211320 | 0.829818 | 4.159611e-55 | -8.615850e-47 |
| Msa1107320 | Msa1216120 | 0.842054 | 3.268419e-58 | -8.615850e-47 |
| Msa1107320 | Msa1223540 | 0.814270 | 1.678347e-51 | -8.615850e-47 |
| Msa1107320 | Msa1223620 | 0.814520 | 1.477876e-51 | -8.615850e-47 |
| Msa1107320 | Msa1223710 | 0.824492 | 7.839765e-54 | -8.615850e-47 |
| Msa1107320 | Msa1223960 | 0.806552 | 7.781844e-50 | -8.615850e-47 |
| Msa1107320 | Msa1223990 | 0.814191 | 1.747303e-51 | -8.615850e-47 |
| Msa1107320 | Msa1255710 | 0.811029 | 8.587955e-51 | -8.615850e-47 |
| Msa1107320 | Msa1258020 | 0.812483 | 4.145383e-51 | -8.615850e-47 |
| Msa1107320 | Msa1259560 | 0.818576 | 1.823719e-52 | -8.615850e-47 |
| Msa1107320 | Msa1259570 | 0.808976 | 2.376424e-50 | -8.615850e-47 |
| Msa1107320 | Msa1263000 | 0.815361 | 9.615118e-52 | -8.615850e-47 |
| Msa1107320 | Msa1263110 | 0.811566 | 6.567559e-51 | -8.615850e-47 |
| Msa1107320 | Msa1263120 | 0.802048 | 6.747586e-49 | -8.615850e-47 |
| Msa1107320 | Msa1263370 | 0.838209 | 3.293754e-57 | -8.615850e-47 |
| Msa1107320 | Msa1263520 | 0.812237 | 4.690008e-51 | -8.615850e-47 |
| Msa1107320 | Msa1268360 | 0.812621 | 3.865880e-51 | -8.615850e-47 |
| Msa1107320 | Msa1273320 | 0.832412 | 9.592597e-56 | -8.615850e-47 |
| Msa1107320 | Msa1283980 | 0.807806 | 4.222662e-50 | -8.615850e-47 |
| Msa1107320 | Msa1286950 | -0.807936 | 3.961142e-50 | -8.615850e-47 |
| Msa1107320 | Msa1299310 | 0.832632 | 8.462461e-56 | -8.615850e-47 |
| Msa1107320 | Msa1302010 | 0.805077 | 1.588565e-49 | -8.615850e-47 |
| Msa1107320 | Msa1302630 | 0.812081 | 5.073450e-51 | -8.615850e-47 |
| Msa1107320 | Msa1319230 | -0.806684 | 7.298032e-50 | -8.615850e-47 |
| Msa1107320 | Msa1322980 | 0.809861 | 1.534735e-50 | -8.615850e-47 |
| Msa1107320 | Msa1329770 | 0.834852 | 2.358898e-56 | -8.615850e-47 |
| Msa1107320 | Msa1335500 | 0.814589 | 1.426427e-51 | -8.615850e-47 |
| Msa1107320 | Msa1348330 | 0.835154 | 1.979263e-56 | -8.615850e-47 |
| Msa1107320 | Msa1362520 | 0.835644 | 1.488578e-56 | -8.615850e-47 |
| Msa1107320 | Msa1362590 | 0.823291 | 1.499008e-53 | -8.615850e-47 |
| Msa1107320 | Msa1363690 | 0.827616 | 1.417580e-54 | -8.615850e-47 |
| Msa1107320 | Msa1373560 | 0.807773 | 4.290515e-50 | -8.615850e-47 |
| Msa1107320 | Msa1377190 | 0.805740 | 1.153455e-49 | -8.615850e-47 |
| Msa1107320 | Msa1377460 | 0.821382 | 4.158490e-53 | -8.615850e-47 |
| Msa1107320 | Msa1378950 | 0.810818 | 9.540606e-51 | -8.615850e-47 |
| Msa1107320 | Msa1379250 | 0.800068 | 1.713925e-48 | -8.615850e-47 |
| Msa1107320 | Msa1379940 | 0.800875 | 1.174066e-48 | -8.615850e-47 |
| Msa1107320 | Msa1380740 | 0.822879 | 1.870312e-53 | -8.615850e-47 |
| Msa1107320 | Msa1395720 | 0.851764 | 7.173557e-61 | -8.615850e-47 |
| Msa1107320 | Msa1396550 | 0.824770 | 6.742020e-54 | -8.615850e-47 |
| Msa1107320 | Msa1400290 | -0.831030 | 2.102468e-55 | -8.615850e-47 |
| Msa1107320 | Msa1401650 | 0.817560 | 3.095735e-52 | -8.615850e-47 |
| Msa1107320 | Msa1407810 | 0.812496 | 4.117885e-51 | -8.615850e-47 |
| Msa1107320 | Msa1409060 | 0.818343 | 2.059523e-52 | -8.615850e-47 |
| Msa1107320 | Msa1417220 | 0.823887 | 1.087235e-53 | -8.615850e-47 |
| Msa1107320 | Msa1433360 | 0.802060 | 6.711630e-49 | -8.615850e-47 |
| Msa1107320 | Msa1434700 | 0.804807 | 1.809231e-49 | -8.615850e-47 |
| Msa1107320 | Msa1437780 | 0.813961 | 1.963805e-51 | -8.615850e-47 |
| Msa1107320 | Msa1441300 | 0.812750 | 3.622695e-51 | -8.615850e-47 |
| Msa1107320 | Msa1441450 | 0.800786 | 1.223909e-48 | -8.615850e-47 |
| Msa1107320 | Msa1442070 | -0.801856 | 7.390700e-49 | -8.615850e-47 |
| Msa1107320 | Msa1445530 | 0.802843 | 4.629253e-49 | -8.615850e-47 |
| Msa1107320 | Msa1445780 | 0.829186 | 5.924830e-55 | -8.615850e-47 |
| Msa1107320 | Msa1447900 | 0.815815 | 7.618331e-52 | -8.615850e-47 |
| Msa1107320 | Msa1458270 | 0.801747 | 7.782874e-49 | -8.615850e-47 |
| Msa1107320 | Msa1461660 | 0.810181 | 1.309606e-50 | -8.615850e-47 |
| Msa1107320 | Msa1462610 | 0.829772 | 4.269444e-55 | -8.615850e-47 |
| Msa0509630 | Msa1107320 | 0.804948 | 1.690544e-49 | -8.615850e-47 |
| Msa0515930 | Msa1107320 | 0.834211 | 3.416675e-56 | -8.615850e-47 |
| Msa0530660 | Msa1107320 | 0.808882 | 2.489329e-50 | -8.615850e-47 |
| Msa0538650 | Msa1107320 | 0.822765 | 1.988589e-53 | -8.615850e-47 |
| Msa0540640 | Msa1107320 | 0.819993 | 8.672393e-53 | -8.615850e-47 |
| Msa0541940 | Msa1107320 | 0.807347 | 5.284618e-50 | -8.615850e-47 |
| Msa0549970 | Msa1107320 | 0.800303 | 1.535075e-48 | -8.615850e-47 |
| Msa0567330 | Msa1107320 | 0.817281 | 3.577576e-52 | -8.615850e-47 |
| Msa0567570 | Msa1107320 | 0.805628 | 1.218022e-49 | -8.615850e-47 |
| Msa0568920 | Msa1107320 | 0.803375 | 3.592434e-49 | -8.615850e-47 |
| Msa0576320 | Msa1107320 | 0.816779 | 4.636665e-52 | -8.615850e-47 |
| Msa0587180 | Msa1107320 | 0.813161 | 2.944846e-51 | -8.615850e-47 |
| Msa0589740 | Msa1107320 | 0.802429 | 5.633119e-49 | -8.615850e-47 |
| Msa0602100 | Msa1107320 | 0.800136 | 1.660345e-48 | -8.615850e-47 |
| Msa0868870 | Msa1107320 | 0.803776 | 2.965600e-49 | -8.615850e-47 |
| Msa0876230 | Msa1107320 | 0.805540 | 1.270588e-49 | -8.615850e-47 |
| Msa0886370 | Msa1107320 | 0.806493 | 8.007239e-50 | -8.615850e-47 |
| Msa0896920 | Msa1107320 | 0.805405 | 1.356449e-49 | -8.615850e-47 |
| Msa0902340 | Msa1107320 | 0.801708 | 7.926194e-49 | -8.615850e-47 |
| Msa0913500 | Msa1107320 | 0.801552 | 8.534351e-49 | -8.615850e-47 |
| Msa0921860 | Msa1107320 | 0.803515 | 3.359463e-49 | -8.615850e-47 |
| Msa0931370 | Msa1107320 | 0.804552 | 2.045528e-49 | -8.615850e-47 |
| Msa0932930 | Msa1107320 | 0.829887 | 4.002346e-55 | -8.615850e-47 |
| Msa0933610 | Msa1107320 | 0.808832 | 2.551193e-50 | -8.615850e-47 |
| Msa0936630 | Msa1107320 | 0.811353 | 7.306562e-51 | -8.615850e-47 |
| Msa0951060 | Msa1107320 | 0.811225 | 7.787521e-51 | -8.615850e-47 |
| Msa0970100 | Msa1107320 | 0.819978 | 8.742583e-53 | -8.615850e-47 |
| Msa0970790 | Msa1107320 | 0.832509 | 9.077907e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107320 | MtrunA17_Chr7g0240471 | 91.667 | 96 | 8 | 0 | 1 | 96 | 1 | 96 | 1.46e-60 | 181 |
| Msa1107320 | MtrunA17_Chr7g0240451 | 88.542 | 96 | 11 | 0 | 1 | 96 | 1 | 96 | 4.41e-58 | 174 |
| Msa1107320 | MtrunA17_Chr7g0240441 | 65.574 | 61 | 5 | 1 | 36 | 96 | 29 | 73 | 3.47e-18 | 73.2 |
| Msa1107320 | MtrunA17_Chr8g0368861 | 44.595 | 74 | 39 | 2 | 24 | 96 | 27 | 99 | 6.60e-12 | 57.8 |
| Msa1107320 | MtrunA17_Chr8g0368831 | 43.243 | 74 | 40 | 2 | 24 | 96 | 35 | 107 | 2.48e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107320 | AT3G53980.2 | 62.162 | 74 | 27 | 1 | 23 | 96 | 21 | 93 | 8.69e-28 | 98.6 |
| Msa1107320 | AT3G53980.1 | 62.162 | 74 | 27 | 1 | 23 | 96 | 21 | 93 | 8.69e-28 | 98.6 |
| Msa1107320 | AT5G05960.1 | 50.538 | 93 | 39 | 2 | 4 | 96 | 10 | 95 | 4.51e-26 | 94.4 |
| Msa1107320 | AT2G37870.1 | 41.176 | 85 | 48 | 2 | 11 | 94 | 9 | 92 | 2.38e-13 | 61.6 |
Find 26 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTGAAAACAAACATAAA+TGG | 0.229535 | 7_3:+48876405 | Msa1107320:CDS |
| AGCTTAAATGCTTCCATATC+TGG | 0.265044 | 7_3:-48875797 | None:intergenic |
| GGTATTGCAGTTCTTGTTGC+AGG | 0.361788 | 7_3:+48875728 | Msa1107320:CDS |
| CAACAACCTCAACTCTTTCA+AGG | 0.398597 | 7_3:-48876385 | None:intergenic |
| GATGTTGTTAGCTACTATTA+TGG | 0.425084 | 7_3:+48876438 | Msa1107320:exon |
| TGCTGAAAACAAACATAAAT+GGG | 0.434655 | 7_3:+48876406 | Msa1107320:CDS |
| TCAAACGTTGCTAAAATGTC+TGG | 0.462464 | 7_3:+48875932 | Msa1107320:CDS |
| AAGGGGTACTACACCAGATA+TGG | 0.470603 | 7_3:+48875784 | Msa1107320:CDS |
| GGATAGTAACAGCAATTTGA+GGG | 0.472152 | 7_3:-48875961 | None:intergenic |
| GGGATAGTAACAGCAATTTG+AGG | 0.508534 | 7_3:-48875962 | None:intergenic |
| TTTCTTGTTTGTTTATAGTG+TGG | 0.514685 | 7_3:+48876492 | Msa1107320:three_prime_UTR |
| GTTGAAAGTGCAGGTGAATG+TGG | 0.515102 | 7_3:+48875761 | Msa1107320:CDS |
| CGAGGCACAACAATTTCATA+AGG | 0.539901 | 7_3:-48875703 | None:intergenic |
| TCTTGTGCTGCACTTGCACA+AGG | 0.541464 | 7_3:-48875824 | None:intergenic |
| AAAGTGCAGGTGAATGTGGA+AGG | 0.549386 | 7_3:+48875765 | Msa1107320:CDS |
| ATGAAATTGTTGTGCCTCGT+TGG | 0.557778 | 7_3:+48875707 | Msa1107320:CDS |
| ACTCTTCCTTGAAAGAGTTG+AGG | 0.566469 | 7_3:+48876379 | Msa1107320:CDS |
| TGTGATCAGACTAAGAAACT+TGG | 0.574065 | 7_3:+48875875 | Msa1107320:CDS |
| ATTCATAGAGTTGAAAGTGC+AGG | 0.578390 | 7_3:+48875752 | Msa1107320:CDS |
| ATCTTTATCAAGAGTAGTAA+CGG | 0.588821 | 7_3:-48876640 | None:intergenic |
| AAAACTGCACAAAGACAACT+TGG | 0.590774 | 7_3:-48875905 | None:intergenic |
| AATACAACACAACTAAGTTG+TGG | 0.625133 | 7_3:-48876464 | None:intergenic |
| GTGTACACAAGTGAGCTGCT+AGG | 0.629312 | 7_3:-48876521 | None:intergenic |
| AGTGCAGGTGAATGTGGAAG+GGG | 0.630405 | 7_3:+48875767 | Msa1107320:CDS |
| AAGTGCAGGTGAATGTGGAA+GGG | 0.641454 | 7_3:+48875766 | Msa1107320:CDS |
| CAAGAACTGCAATACCAACG+AGG | 0.744882 | 7_3:-48875721 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAACTTTTATATGAAAA+CGG | - | chr7_3:48876073-48876092 | None:intergenic | 10.0% |
| !!! | TTTTAACAATAAATTTTCTT+AGG | - | chr7_3:48876200-48876219 | None:intergenic | 10.0% |
| !!! | AAATAACTTTTATATGAAAA+CGG | - | chr7_3:48876073-48876092 | None:intergenic | 10.0% |
| !!! | TTTTAACAATAAATTTTCTT+AGG | - | chr7_3:48876200-48876219 | None:intergenic | 10.0% |
| !!! | GTTTTCATATAAAAGTTATT+TGG | + | chr7_3:48876072-48876091 | Msa1107320:intron | 15.0% |
| !! | ATGTAACATTAATAATTGAT+AGG | + | chr7_3:48876125-48876144 | Msa1107320:intron | 15.0% |
| !!! | GTTTTCATATAAAAGTTATT+TGG | + | chr7_3:48876072-48876091 | Msa1107320:intron | 15.0% |
| !! | ATGTAACATTAATAATTGAT+AGG | + | chr7_3:48876125-48876144 | Msa1107320:intron | 15.0% |
| !! | AATGAGATTATAGATAGTTA+AGG | + | chr7_3:48876151-48876170 | Msa1107320:intron | 20.0% |
| !! | ATGAGATTATAGATAGTTAA+GGG | + | chr7_3:48876152-48876171 | Msa1107320:intron | 20.0% |
| !!! | AATAAAACATACTCTTTTAG+TGG | + | chr7_3:48876551-48876570 | Msa1107320:three_prime_UTR | 20.0% |
| !!! | AGTATTTTTAGAATTTGAGA+TGG | - | chr7_3:48876666-48876685 | None:intergenic | 20.0% |
| !! | AATGAGATTATAGATAGTTA+AGG | + | chr7_3:48876151-48876170 | Msa1107320:intron | 20.0% |
| !! | ATGAGATTATAGATAGTTAA+GGG | + | chr7_3:48876152-48876171 | Msa1107320:intron | 20.0% |
| !!! | AATAAAACATACTCTTTTAG+TGG | + | chr7_3:48876551-48876570 | Msa1107320:three_prime_UTR | 20.0% |
| !!! | AGTATTTTTAGAATTTGAGA+TGG | - | chr7_3:48876666-48876685 | None:intergenic | 20.0% |
| !!! | TAGATAGTTAAGGGTATTAT+AGG | + | chr7_3:48876161-48876180 | Msa1107320:intron | 25.0% |
| ! | TTGTTAAAATCTTCCCTTTA+TGG | + | chr7_3:48876211-48876230 | Msa1107320:intron | 25.0% |
| ! | TTGCTGAAAACAAACATAAA+TGG | + | chr7_3:48876405-48876424 | Msa1107320:CDS | 25.0% |
| ! | TGCTGAAAACAAACATAAAT+GGG | + | chr7_3:48876406-48876425 | Msa1107320:CDS | 25.0% |
| !! | TTTCTTGTTTGTTTATAGTG+TGG | + | chr7_3:48876492-48876511 | Msa1107320:three_prime_UTR | 25.0% |
| !!! | AGAGTATGTTTTATTCATGA+GGG | - | chr7_3:48876546-48876565 | None:intergenic | 25.0% |
| !!! | AAGAGTATGTTTTATTCATG+AGG | - | chr7_3:48876547-48876566 | None:intergenic | 25.0% |
| !! | TTCCTACTAAAACATTTTAG+TGG | + | chr7_3:48876585-48876604 | Msa1107320:three_prime_UTR | 25.0% |
| ! | ATCTTTATCAAGAGTAGTAA+CGG | - | chr7_3:48876643-48876662 | None:intergenic | 25.0% |
| !! | TGAATTTTGTTAAAGATGTG+AGG | + | chr7_3:48876693-48876712 | Msa1107320:three_prime_UTR | 25.0% |
| !!! | TAGATAGTTAAGGGTATTAT+AGG | + | chr7_3:48876161-48876180 | Msa1107320:intron | 25.0% |
| ! | TTGTTAAAATCTTCCCTTTA+TGG | + | chr7_3:48876211-48876230 | Msa1107320:intron | 25.0% |
| ! | TTGCTGAAAACAAACATAAA+TGG | + | chr7_3:48876405-48876424 | Msa1107320:CDS | 25.0% |
| ! | TGCTGAAAACAAACATAAAT+GGG | + | chr7_3:48876406-48876425 | Msa1107320:CDS | 25.0% |
| !! | TTTCTTGTTTGTTTATAGTG+TGG | + | chr7_3:48876492-48876511 | Msa1107320:three_prime_UTR | 25.0% |
| !!! | AGAGTATGTTTTATTCATGA+GGG | - | chr7_3:48876546-48876565 | None:intergenic | 25.0% |
| !!! | AAGAGTATGTTTTATTCATG+AGG | - | chr7_3:48876547-48876566 | None:intergenic | 25.0% |
| !! | TTCCTACTAAAACATTTTAG+TGG | + | chr7_3:48876585-48876604 | Msa1107320:three_prime_UTR | 25.0% |
| ! | ATCTTTATCAAGAGTAGTAA+CGG | - | chr7_3:48876643-48876662 | None:intergenic | 25.0% |
| !! | TGAATTTTGTTAAAGATGTG+AGG | + | chr7_3:48876693-48876712 | Msa1107320:three_prime_UTR | 25.0% |
| !! | CTAGTTTCTAGTTCCATAAA+GGG | - | chr7_3:48876227-48876246 | None:intergenic | 30.0% |
| !! | TCTAGTTTCTAGTTCCATAA+AGG | - | chr7_3:48876228-48876247 | None:intergenic | 30.0% |
| TGCCTAAGAAAAATGTGAAA+CGG | + | chr7_3:48876258-48876277 | Msa1107320:intron | 30.0% | |
| ! | TACCGTTTCACATTTTTCTT+AGG | - | chr7_3:48876263-48876282 | None:intergenic | 30.0% |
| ! | CTACTTGTCAATTTTCTTGA+TGG | + | chr7_3:48876310-48876329 | Msa1107320:intron | 30.0% |
| GATGTTGTTAGCTACTATTA+TGG | + | chr7_3:48876438-48876457 | Msa1107320:exon | 30.0% | |
| AATACAACACAACTAAGTTG+TGG | - | chr7_3:48876467-48876486 | None:intergenic | 30.0% | |
| !!! | GACCACTAAAATGTTTTAGT+AGG | - | chr7_3:48876590-48876609 | None:intergenic | 30.0% |
| !! | TAAAACATTTTAGTGGTCAG+TGG | + | chr7_3:48876592-48876611 | Msa1107320:three_prime_UTR | 30.0% |
| !! | CTAGTTTCTAGTTCCATAAA+GGG | - | chr7_3:48876227-48876246 | None:intergenic | 30.0% |
| !! | TCTAGTTTCTAGTTCCATAA+AGG | - | chr7_3:48876228-48876247 | None:intergenic | 30.0% |
| TGCCTAAGAAAAATGTGAAA+CGG | + | chr7_3:48876258-48876277 | Msa1107320:intron | 30.0% | |
| ! | TACCGTTTCACATTTTTCTT+AGG | - | chr7_3:48876263-48876282 | None:intergenic | 30.0% |
| ! | CTACTTGTCAATTTTCTTGA+TGG | + | chr7_3:48876310-48876329 | Msa1107320:intron | 30.0% |
| GATGTTGTTAGCTACTATTA+TGG | + | chr7_3:48876438-48876457 | Msa1107320:exon | 30.0% | |
| AATACAACACAACTAAGTTG+TGG | - | chr7_3:48876467-48876486 | None:intergenic | 30.0% | |
| !!! | GACCACTAAAATGTTTTAGT+AGG | - | chr7_3:48876590-48876609 | None:intergenic | 30.0% |
| !! | TAAAACATTTTAGTGGTCAG+TGG | + | chr7_3:48876592-48876611 | Msa1107320:three_prime_UTR | 30.0% |
| ! | ATTCATAGAGTTGAAAGTGC+AGG | + | chr7_3:48875752-48875771 | Msa1107320:CDS | 35.0% |
| AGCTTAAATGCTTCCATATC+TGG | - | chr7_3:48875800-48875819 | None:intergenic | 35.0% | |
| TGTGATCAGACTAAGAAACT+TGG | + | chr7_3:48875875-48875894 | Msa1107320:CDS | 35.0% | |
| AAAACTGCACAAAGACAACT+TGG | - | chr7_3:48875908-48875927 | None:intergenic | 35.0% | |
| TCAAACGTTGCTAAAATGTC+TGG | + | chr7_3:48875932-48875951 | Msa1107320:CDS | 35.0% | |
| GGATAGTAACAGCAATTTGA+GGG | - | chr7_3:48875964-48875983 | None:intergenic | 35.0% | |
| GTCCACACTTATAACCAATA+GGG | - | chr7_3:48876012-48876031 | None:intergenic | 35.0% | |
| TAAGTAACTAACAAGTCCCT+CGG | + | chr7_3:48876033-48876052 | Msa1107320:intron | 35.0% | |
| ! | ATTCATAGAGTTGAAAGTGC+AGG | + | chr7_3:48875752-48875771 | Msa1107320:CDS | 35.0% |
| AGCTTAAATGCTTCCATATC+TGG | - | chr7_3:48875800-48875819 | None:intergenic | 35.0% | |
| TGTGATCAGACTAAGAAACT+TGG | + | chr7_3:48875875-48875894 | Msa1107320:CDS | 35.0% | |
| AAAACTGCACAAAGACAACT+TGG | - | chr7_3:48875908-48875927 | None:intergenic | 35.0% | |
| TCAAACGTTGCTAAAATGTC+TGG | + | chr7_3:48875932-48875951 | Msa1107320:CDS | 35.0% | |
| GGATAGTAACAGCAATTTGA+GGG | - | chr7_3:48875964-48875983 | None:intergenic | 35.0% | |
| GTCCACACTTATAACCAATA+GGG | - | chr7_3:48876012-48876031 | None:intergenic | 35.0% | |
| TAAGTAACTAACAAGTCCCT+CGG | + | chr7_3:48876033-48876052 | Msa1107320:intron | 35.0% | |
| CGAGGCACAACAATTTCATA+AGG | - | chr7_3:48875706-48875725 | None:intergenic | 40.0% | |
| ATGAAATTGTTGTGCCTCGT+TGG | + | chr7_3:48875707-48875726 | Msa1107320:CDS | 40.0% | |
| GGGATAGTAACAGCAATTTG+AGG | - | chr7_3:48875965-48875984 | None:intergenic | 40.0% | |
| TAGCAAAGTTGCAGCGTTTA+GGG | - | chr7_3:48875985-48876004 | None:intergenic | 40.0% | |
| TTAGCAAAGTTGCAGCGTTT+AGG | - | chr7_3:48875986-48876005 | None:intergenic | 40.0% | |
| AACTTTGCTAATCGCCCTAT+TGG | + | chr7_3:48875995-48876014 | Msa1107320:intron | 40.0% | |
| CGTCCACACTTATAACCAAT+AGG | - | chr7_3:48876013-48876032 | None:intergenic | 40.0% | |
| GGCAACTTAAAAGAAACCGA+GGG | - | chr7_3:48876052-48876071 | None:intergenic | 40.0% | |
| ACTCTTCCTTGAAAGAGTTG+AGG | + | chr7_3:48876379-48876398 | Msa1107320:CDS | 40.0% | |
| CAACAACCTCAACTCTTTCA+AGG | - | chr7_3:48876388-48876407 | None:intergenic | 40.0% | |
| CGAGGCACAACAATTTCATA+AGG | - | chr7_3:48875706-48875725 | None:intergenic | 40.0% | |
| ATGAAATTGTTGTGCCTCGT+TGG | + | chr7_3:48875707-48875726 | Msa1107320:CDS | 40.0% | |
| GGGATAGTAACAGCAATTTG+AGG | - | chr7_3:48875965-48875984 | None:intergenic | 40.0% | |
| TAGCAAAGTTGCAGCGTTTA+GGG | - | chr7_3:48875985-48876004 | None:intergenic | 40.0% | |
| TTAGCAAAGTTGCAGCGTTT+AGG | - | chr7_3:48875986-48876005 | None:intergenic | 40.0% | |
| AACTTTGCTAATCGCCCTAT+TGG | + | chr7_3:48875995-48876014 | Msa1107320:intron | 40.0% | |
| CGTCCACACTTATAACCAAT+AGG | - | chr7_3:48876013-48876032 | None:intergenic | 40.0% | |
| GGCAACTTAAAAGAAACCGA+GGG | - | chr7_3:48876052-48876071 | None:intergenic | 40.0% | |
| ACTCTTCCTTGAAAGAGTTG+AGG | + | chr7_3:48876379-48876398 | Msa1107320:CDS | 40.0% | |
| CAACAACCTCAACTCTTTCA+AGG | - | chr7_3:48876388-48876407 | None:intergenic | 40.0% | |
| CAAGAACTGCAATACCAACG+AGG | - | chr7_3:48875724-48875743 | None:intergenic | 45.0% | |
| GGTATTGCAGTTCTTGTTGC+AGG | + | chr7_3:48875728-48875747 | Msa1107320:CDS | 45.0% | |
| ! | GTTGAAAGTGCAGGTGAATG+TGG | + | chr7_3:48875761-48875780 | Msa1107320:CDS | 45.0% |
| AAAGTGCAGGTGAATGTGGA+AGG | + | chr7_3:48875765-48875784 | Msa1107320:CDS | 45.0% | |
| AAGTGCAGGTGAATGTGGAA+GGG | + | chr7_3:48875766-48875785 | Msa1107320:CDS | 45.0% | |
| !! | AAGGGGTACTACACCAGATA+TGG | + | chr7_3:48875784-48875803 | Msa1107320:CDS | 45.0% |
| ! | CGCCCTATTGGTTATAAGTG+TGG | + | chr7_3:48876007-48876026 | Msa1107320:intron | 45.0% |
| CGGCAACTTAAAAGAAACCG+AGG | - | chr7_3:48876053-48876072 | None:intergenic | 45.0% | |
| CAAGAACTGCAATACCAACG+AGG | - | chr7_3:48875724-48875743 | None:intergenic | 45.0% | |
| GGTATTGCAGTTCTTGTTGC+AGG | + | chr7_3:48875728-48875747 | Msa1107320:CDS | 45.0% | |
| ! | GTTGAAAGTGCAGGTGAATG+TGG | + | chr7_3:48875761-48875780 | Msa1107320:CDS | 45.0% |
| AAAGTGCAGGTGAATGTGGA+AGG | + | chr7_3:48875765-48875784 | Msa1107320:CDS | 45.0% | |
| AAGTGCAGGTGAATGTGGAA+GGG | + | chr7_3:48875766-48875785 | Msa1107320:CDS | 45.0% | |
| !! | AAGGGGTACTACACCAGATA+TGG | + | chr7_3:48875784-48875803 | Msa1107320:CDS | 45.0% |
| ! | CGCCCTATTGGTTATAAGTG+TGG | + | chr7_3:48876007-48876026 | Msa1107320:intron | 45.0% |
| CGGCAACTTAAAAGAAACCG+AGG | - | chr7_3:48876053-48876072 | None:intergenic | 45.0% | |
| AGTGCAGGTGAATGTGGAAG+GGG | + | chr7_3:48875767-48875786 | Msa1107320:CDS | 50.0% | |
| TCTTGTGCTGCACTTGCACA+AGG | - | chr7_3:48875827-48875846 | None:intergenic | 50.0% | |
| GTGTACACAAGTGAGCTGCT+AGG | - | chr7_3:48876524-48876543 | None:intergenic | 50.0% | |
| AGTGCAGGTGAATGTGGAAG+GGG | + | chr7_3:48875767-48875786 | Msa1107320:CDS | 50.0% | |
| TCTTGTGCTGCACTTGCACA+AGG | - | chr7_3:48875827-48875846 | None:intergenic | 50.0% | |
| GTGTACACAAGTGAGCTGCT+AGG | - | chr7_3:48876524-48876543 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 48875695 | 48876723 | 48875695 | ID=Msa1107320;Name=Msa1107320 |
| chr7_3 | mRNA | 48875695 | 48876723 | 48875695 | ID=Msa1107320-mRNA-1;Parent=Msa1107320;Name=Msa1107320-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0.5|1|1|1|2|284|114 |
| chr7_3 | exon | 48875695 | 48875973 | 48875695 | ID=Msa1107320-mRNA-1:exon:9952;Parent=Msa1107320-mRNA-1 |
| chr7_3 | exon | 48876374 | 48876723 | 48876374 | ID=Msa1107320-mRNA-1:exon:9953;Parent=Msa1107320-mRNA-1 |
| chr7_3 | CDS | 48875695 | 48875973 | 48875695 | ID=Msa1107320-mRNA-1:cds;Parent=Msa1107320-mRNA-1 |
| chr7_3 | CDS | 48876374 | 48876439 | 48876374 | ID=Msa1107320-mRNA-1:cds;Parent=Msa1107320-mRNA-1 |
| chr7_3 | three_prime_UTR | 48876440 | 48876723 | 48876440 | ID=Msa1107320-mRNA-1:three_prime_utr;Parent=Msa1107320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
