AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1072430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072430 MtrunA17_Chr7g0254481 91.877 357 7 1 1 357 1 335 0.0 645
Msa1072430 MtrunA17_Chr3g0115281 41.702 235 109 3 103 333 84 294 5.22e-52 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1072430 AT5G17710.2 55.689 334 112 7 1 327 1 305 4.52e-104 309
Msa1072430 AT5G17710.3 55.090 334 112 7 1 327 1 303 2.42e-102 305
Msa1072430 AT5G17710.1 55.090 334 112 7 1 327 1 303 2.42e-102 305
Msa1072430 AT1G36390.1 46.154 208 90 1 115 322 78 263 1.32e-58 191
Msa1072430 AT1G36390.2 46.154 208 90 1 115 322 78 263 1.32e-58 191

Find 146 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCCAGGAACGTAATTA+TGG 0.202120 7_2:-69516841 Msa1072430:three_prime_UTR
CTCATAATTTCTGTATTCTT+TGG 0.228496 7_2:-69516576 Msa1072430:three_prime_UTR
TAATACTAATTCCCCTTAAA+AGG 0.236252 7_2:+69516781 None:intergenic
ACTTCTTGCTCCGGCTTTGC+AGG 0.275813 7_2:+69516996 None:intergenic
CGTCATTCTCTTTACTGTCC+TGG 0.299850 7_2:+69516940 None:intergenic
TGCTCCGGCTTTGCAGGTCC+TGG 0.309086 7_2:+69517002 None:intergenic
TTCACCTGAGGTTCAGGTTC+TGG 0.325601 7_2:-69521691 Msa1072430:intron
TCAAGATTCACCTGAGGTTC+AGG 0.330277 7_2:-69521697 Msa1072430:CDS
GACGGAAACGCGTGAGGTTC+TGG 0.344746 7_2:+69521839 None:intergenic
GCTGATACCTTCACCATTGA+TGG 0.346148 7_2:+69517029 None:intergenic
CGGCGGTGGTGAGAAGGGTT+GGG 0.348997 7_2:+69521880 None:intergenic
AAGAGGTGAAGGTCTTCTTC+TGG 0.355726 7_2:+69521809 None:intergenic
AGTGTTTGGCACCTGGAGTT+AGG 0.357552 7_2:-69516641 Msa1072430:three_prime_UTR
GTGCAGACTTTGACAATTAT+CGG 0.363290 7_2:-69519107 Msa1072430:CDS
GCGGCGGTGGTGAGAAGGGT+TGG 0.378634 7_2:+69521879 None:intergenic
ACTGTCCTGGGAAGTTTCAT+TGG 0.386463 7_2:+69516953 None:intergenic
GGAGAGTTTGTTGCCTGTAT+TGG 0.387083 7_2:-69519028 Msa1072430:CDS
TTTATGCCCTTGCATGGCTT+TGG 0.387458 7_2:-69516731 Msa1072430:three_prime_UTR
GTTGCAATTGTTCAAGTGTT+TGG 0.393480 7_2:-69516655 Msa1072430:three_prime_UTR
ATCTCCAGGAACGTAATTAT+GGG 0.395601 7_2:-69516840 Msa1072430:three_prime_UTR
ATGGCCGGAATGTGGGAGTT+CGG 0.396663 7_2:+69521904 None:intergenic
TGTTGAAGAGGAAATGAAAT+TGG 0.400551 7_2:+69521979 None:intergenic
GGTTGGGGATGGCCGGAATG+TGG 0.403395 7_2:+69521896 None:intergenic
CTTGAAAGGACAACTTTGCC+TGG 0.404934 7_2:-69516896 Msa1072430:exon
AAGGTACTAACTTGACGAAC+CGG 0.414480 7_2:+69521754 None:intergenic
GGCGGTGGTGAGAAGGGTTG+GGG 0.414826 7_2:+69521881 None:intergenic
AACACCCATAATTACGTTCC+TGG 0.419126 7_2:+69516836 None:intergenic
TATTGATAACTCTTCGGATA+AGG 0.421690 7_2:+69519155 None:intergenic
TCCTCCGAACTCCCACATTC+CGG 0.425268 7_2:-69521908 Msa1072430:CDS
TCCTGTGGTACTTCTTGCTC+CGG 0.427586 7_2:+69516987 None:intergenic
CTCTCAAAATTATCCAATAC+AGG 0.430687 7_2:+69519015 None:intergenic
TAACTTACCATTGGATCAAA+GGG 0.441395 7_2:+69518862 None:intergenic
TTGTTCAAGTGTTTGGCACC+TGG 0.444360 7_2:-69516648 Msa1072430:three_prime_UTR
CCTCTTAAATCCCACCGGTT+CGG 0.449999 7_2:-69521792 Msa1072430:CDS
GTCATTCTCTTTACTGTCCT+GGG 0.450604 7_2:+69516941 None:intergenic
GATGAGATAGTAGGTCTTGA+AGG 0.461337 7_2:-69519189 Msa1072430:CDS
TGGTCCAGGACCTGCAAAGC+CGG 0.475014 7_2:-69517006 Msa1072430:CDS
AGGTGGCGGCGGTGGTGAGA+AGG 0.476821 7_2:+69521874 None:intergenic
GATGATGAGGTCAGCGACGC+TGG 0.477103 7_2:-69519324 Msa1072430:CDS
CGATTGAATTTCGAGCCAAC+TGG 0.479280 7_2:+69517547 None:intergenic
CCTTTCAGAAACATGGTACC+TGG 0.480611 7_2:+69516689 None:intergenic
ATGAAATTGGTGGGAAATGA+GGG 0.480912 7_2:+69521992 None:intergenic
ACCTACTATCTCATCATCAA+TGG 0.481367 7_2:+69519197 None:intergenic
CCCTTAAAAGGAAACTTGGC+AGG 0.483349 7_2:+69516793 None:intergenic
TTGAACAATTGCAACTCACT+CGG 0.485267 7_2:+69516663 None:intergenic
TGAACAATTGCAACTCACTC+GGG 0.486245 7_2:+69516664 None:intergenic
ATTAGAAGAGGTGGCGGCGG+TGG 0.488636 7_2:+69521866 None:intergenic
GTGGCCATCGGAAGAAGATA+AGG 0.488760 7_2:+69521933 None:intergenic
GCCGGAGCAAGAAGTACCAC+AGG 0.489513 7_2:-69516988 Msa1072430:CDS
TGGAGTTGAGCCAGTGGATA+CGG 0.491468 7_2:-69518893 Msa1072430:CDS
TGAGAAGGGTTGGGGATGGC+CGG 0.493613 7_2:+69521889 None:intergenic
ATTCCCCTTAAAAGGAAACT+TGG 0.493670 7_2:+69516789 None:intergenic
TTAACTTACCATTGGATCAA+AGG 0.494416 7_2:+69518861 None:intergenic
TATCTATCAGTTTAATCTCC+AGG 0.498081 7_2:-69516854 Msa1072430:three_prime_UTR
CCGCCTCTTACGTCCATCAA+TGG 0.498736 7_2:-69517042 Msa1072430:CDS
AGATAGAGACCGCCTTTCAC+TGG 0.499626 7_2:-69519076 Msa1072430:CDS
GTTGGGGATGGCCGGAATGT+GGG 0.500157 7_2:+69521897 None:intergenic
CCGAACCGGTGGGATTTAAG+AGG 0.507744 7_2:+69521792 None:intergenic
GTTCGGAGGACGGTGGCCAT+CGG 0.508967 7_2:+69521921 None:intergenic
CAAGGTGGAGACAGAGGGAG+AGG 0.511028 7_2:-69518977 Msa1072430:CDS
TCGGTTCAATTCCCACTCCC+CGG 0.511973 7_2:-69521773 Msa1072430:CDS
ATTGAAATTCTAAACTCACT+TGG 0.514285 7_2:-69518913 Msa1072430:CDS
AACTTGACGAACCGGGGAGT+GGG 0.515310 7_2:+69521762 None:intergenic
TCACCATTGATGGACGTAAG+AGG 0.516147 7_2:+69517039 None:intergenic
ATACTTCAAGAATTCAGAAA+GGG 0.518433 7_2:-69517080 Msa1072430:CDS
GGTGGCGGCGGTGGTGAGAA+GGG 0.521742 7_2:+69521875 None:intergenic
AGAAACAGAGTCCGCTTGAA+AGG 0.521889 7_2:-69516910 Msa1072430:exon
AATACTATCAGAGGTGAAGC+AGG 0.523830 7_2:+69519294 None:intergenic
GTGGTGAGAAGGGTTGGGGA+TGG 0.524363 7_2:+69521885 None:intergenic
AGGTACTAACTTGACGAACC+GGG 0.524465 7_2:+69521755 None:intergenic
GAGAGCTAAAGCTCAGATCA+AGG 0.525781 7_2:-69518995 Msa1072430:CDS
TGCAGTCAAAGTTGCTGAGT+TGG 0.525898 7_2:-69519235 Msa1072430:CDS
TACAGATGGTGCTGCTGATG+TGG 0.527477 7_2:-69519361 Msa1072430:CDS
GTATCTCCGTCAAAAGCAAA+AGG 0.528487 7_2:+69521735 None:intergenic
TGGAAGTCCCTTTGATCCAA+TGG 0.531419 7_2:-69518869 Msa1072430:intron
CACTGGTCACAAATGCTCAA+GGG 0.535412 7_2:-69519059 Msa1072430:CDS
AATGAAATTGGTGGGAAATG+AGG 0.537988 7_2:+69521991 None:intergenic
TAACTTGACGAACCGGGGAG+TGG 0.538642 7_2:+69521761 None:intergenic
GAGTGGGAATTGAACCGAAC+CGG 0.540147 7_2:+69521778 None:intergenic
TGGCCATCGGAAGAAGATAA+GGG 0.543322 7_2:+69521934 None:intergenic
CTTACCAGAACCTGAACCTC+AGG 0.544704 7_2:+69521687 None:intergenic
CATACTTCAAGAATTCAGAA+AGG 0.546520 7_2:-69517081 Msa1072430:CDS
CCAGGTACCATGTTTCTGAA+AGG 0.546524 7_2:-69516689 Msa1072430:three_prime_UTR
GTGAAGGTATCAGCTGGTCC+AGG 0.550393 7_2:-69517020 Msa1072430:CDS
TTACCCTTATCTTCTTCCGA+TGG 0.550439 7_2:-69521937 Msa1072430:exon
GATTCTGATGAATTTGAAGA+TGG 0.552865 7_2:-69517107 Msa1072430:CDS
ATCTTGAACTTGAGGTGCCT+CGG 0.553813 7_2:+69521713 None:intergenic
GAGCATTTGTGACCAGTGAA+AGG 0.557793 7_2:+69519064 None:intergenic
TCCATTGATGATGAGATAGT+AGG 0.558085 7_2:-69519198 Msa1072430:CDS
TCAGGTGAATCTTGAACTTG+AGG 0.558414 7_2:+69521705 None:intergenic
ATGCAGGGGCGCAAACCAGT+TGG 0.567238 7_2:-69517562 Msa1072430:intron
TCACTGGTCACAAATGCTCA+AGG 0.568684 7_2:-69519060 Msa1072430:CDS
GGCAAAGTTGTCCTTTCAAG+CGG 0.568729 7_2:+69516899 None:intergenic
GATAAGGGTAAGGTGGCGAT+TGG 0.570719 7_2:+69521949 None:intergenic
GAATGTGGGAGTTCGGAGGA+CGG 0.572182 7_2:+69521911 None:intergenic
CGGTGGGATTTAAGAGGTGA+AGG 0.573354 7_2:+69521798 None:intergenic
ACACTGATTCTCCTAACTCC+AGG 0.573651 7_2:+69516630 None:intergenic
TGGGAATTGAACCGAACCGG+TGG 0.574334 7_2:+69521781 None:intergenic
TTGGTGACTTGTTCTTCCTG+TGG 0.575510 7_2:+69516972 None:intergenic
CAGATCAAGGTGGAGACAGA+GGG 0.576696 7_2:-69518982 Msa1072430:CDS
ATGAGATAGTAGGTCTTGAA+GGG 0.578111 7_2:-69519188 Msa1072430:CDS
GGAGAGTACAGGCGATGATG+AGG 0.580094 7_2:-69519337 Msa1072430:CDS
TCTTCTTCTGGAGGATGCGA+CGG 0.580174 7_2:+69521821 None:intergenic
ACTTGTACAAAACTGAATCC+AGG 0.580787 7_2:+69516878 None:intergenic
TCAGATCAAGGTGGAGACAG+AGG 0.582701 7_2:-69518983 Msa1072430:CDS
ATATCTACCAAAGCCATGCA+AGG 0.584445 7_2:+69516724 None:intergenic
ATCGGAAGAAGATAAGGGTA+AGG 0.587373 7_2:+69521939 None:intergenic
GTTGAGCCAGTGGATACGGT+TGG 0.590743 7_2:-69518889 Msa1072430:CDS
GGACTTCCAACCGTATCCAC+TGG 0.596990 7_2:+69518883 None:intergenic
TCAATGGTGAAGGTATCAGC+TGG 0.597135 7_2:-69517026 Msa1072430:CDS
CTTCACCTCTTAAATCCCAC+CGG 0.598298 7_2:-69521797 Msa1072430:CDS
GCTGATGTGGAGGAGAGTAC+AGG 0.601575 7_2:-69519348 Msa1072430:CDS
GACTGAAGTAATACTATCAG+AGG 0.601933 7_2:+69519285 None:intergenic
AAATGCTCAAGGGGAAGTTG+TGG 0.607604 7_2:-69519049 Msa1072430:CDS
GGTTCTGGAGTGATTAGAAG+AGG 0.608963 7_2:+69521854 None:intergenic
AAAGATCGAAAACTAAGGAT+CGG 0.611204 7_2:-69519129 Msa1072430:CDS
ATTGGCGAATTGTGTTGAAG+AGG 0.611554 7_2:+69521967 None:intergenic
GTGATTAGAAGAGGTGGCGG+CGG 0.615055 7_2:+69521863 None:intergenic
AGTCACCAATGAAACTTCCC+AGG 0.615111 7_2:-69516958 Msa1072430:CDS
CGAGTGTTAATGTTAAGCTG+TGG 0.617060 7_2:+69516485 None:intergenic
GGAGTGATTAGAAGAGGTGG+CGG 0.618399 7_2:+69521860 None:intergenic
ACTGGTCACAAATGCTCAAG+GGG 0.619416 7_2:-69519058 Msa1072430:CDS
CTTACGTCCATCAATGGTGA+AGG 0.622403 7_2:-69517036 Msa1072430:CDS
CTTTCAGAAACATGGTACCT+GGG 0.628287 7_2:+69516690 None:intergenic
ATTCAACAGGACTCTACAGA+TGG 0.628787 7_2:-69519375 Msa1072430:intron
TGAAGAGGAAATGAAATTGG+TGG 0.633608 7_2:+69521982 None:intergenic
GCCGGAATGTGGGAGTTCGG+AGG 0.636031 7_2:+69521907 None:intergenic
TCTGGAGTGATTAGAAGAGG+TGG 0.641074 7_2:+69521857 None:intergenic
CTCACTTGGAGTTGAGCCAG+TGG 0.641190 7_2:-69518899 Msa1072430:CDS
TGTGGGAGTTCGGAGGACGG+TGG 0.642626 7_2:+69521914 None:intergenic
TCGGGGTCCTTTCAGAAACA+TGG 0.644196 7_2:+69516682 None:intergenic
GGATGCGACGGAAACGCGTG+AGG 0.644324 7_2:+69521833 None:intergenic
AGATGGTGCTGCTGATGTGG+AGG 0.644434 7_2:-69519358 Msa1072430:CDS
GAAGAGGAAATGAAATTGGT+GGG 0.646373 7_2:+69521983 None:intergenic
AGGTGAAGGTCTTCTTCTGG+AGG 0.646515 7_2:+69521812 None:intergenic
GGAAGAAGATAAGGGTAAGG+TGG 0.648207 7_2:+69521942 None:intergenic
ACATGAAGCAATTATGCGTG+AGG 0.649725 7_2:-69517129 Msa1072430:CDS
GAACAATTGCAACTCACTCG+GGG 0.651509 7_2:+69516665 None:intergenic
TATCTACCAAAGCCATGCAA+GGG 0.656555 7_2:+69516725 None:intergenic
GGTACTAACTTGACGAACCG+GGG 0.661706 7_2:+69521756 None:intergenic
GGGAATTGAACCGAACCGGT+GGG 0.665597 7_2:+69521782 None:intergenic
CAGGACAGTAAAGAGAATGA+CGG 0.668315 7_2:-69516939 Msa1072430:CDS
CATTTGTGACCAGTGAAAGG+CGG 0.686573 7_2:+69519067 None:intergenic
CCATTGATGGACGTAAGAGG+CGG 0.691889 7_2:+69517042 None:intergenic
TCAAGTTCAAGATTCACCTG+AGG 0.703232 7_2:-69521703 Msa1072430:CDS
AGCTAAAGCTCAGATCAAGG+TGG 0.719934 7_2:-69518992 Msa1072430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAAAGAAAAATAAAAAA+TGG + chr7_2:69517585-69517604 None:intergenic 10.0%
!! AAATTAAAGTATAGAAATAT+TGG + chr7_2:69517780-69517799 None:intergenic 10.0%
!! ATAAACAATAGCAAAAAATA+CGG + chr7_2:69517283-69517302 None:intergenic 15.0%
!!! ATATTGTTGTTTTTATTGAT+TGG - chr7_2:69517457-69517476 Msa1072430:intron 15.0%
!! AAAGAAAAATAAAAAATGGA+GGG + chr7_2:69517581-69517600 None:intergenic 15.0%
!! AAAAGAAAAATAAAAAATGG+AGG + chr7_2:69517582-69517601 None:intergenic 15.0%
!!! TTCTAAAACATCAAATATTT+TGG + chr7_2:69517630-69517649 None:intergenic 15.0%
!! AAACATCAAAAGATAAAAAA+CGG - chr7_2:69517826-69517845 Msa1072430:intron 15.0%
!! AAAATCTTGTAATTTATATG+TGG + chr7_2:69518511-69518530 None:intergenic 15.0%
!!! ACATATAAATTACAAGATTT+TGG - chr7_2:69518510-69518529 Msa1072430:intron 15.0%
!!! ATATACAAACACAATAATTT+TGG + chr7_2:69518726-69518745 None:intergenic 15.0%
!!! ATTTAAAATGTCTCTAAATT+AGG + chr7_2:69518804-69518823 None:intergenic 15.0%
!!! TTTATTTTTTTGTTTGTTTG+TGG - chr7_2:69519032-69519051 Msa1072430:CDS 15.0%
!!! ATTTTTTATTAACTTACCAT+TGG + chr7_2:69519632-69519651 None:intergenic 15.0%
!!! GTCTTTTAATAAAACTTTAA+GGG + chr7_2:69519737-69519756 None:intergenic 15.0%
!!! TGTCTTTTAATAAAACTTTA+AGG + chr7_2:69519738-69519757 None:intergenic 15.0%
!! ATCAATCATGAAATAATTAA+GGG + chr7_2:69519797-69519816 None:intergenic 15.0%
!!! TTTTTTTTGTATGGAAAATA+TGG - chr7_2:69519941-69519960 Msa1072430:intron 15.0%
!!! AATAGATGATTAGTAATTTT+TGG - chr7_2:69520142-69520161 Msa1072430:intron 15.0%
!!! TTTCATATTCATAGTTTTTT+GGG - chr7_2:69520402-69520421 Msa1072430:intron 15.0%
!!! TAATGTTTTTTCTAAACTAA+AGG - chr7_2:69520507-69520526 Msa1072430:intron 15.0%
!!! AATGTTTTTTCTAAACTAAA+GGG - chr7_2:69520508-69520527 Msa1072430:intron 15.0%
!!! AAATTTCTTTTTTTTGCAAA+TGG - chr7_2:69520633-69520652 Msa1072430:intron 15.0%
!! TAAGACAATGTAAATATAAA+AGG + chr7_2:69520674-69520693 None:intergenic 15.0%
!! AAATTATCTAAAAAATTCGT+TGG + chr7_2:69521963-69521982 None:intergenic 15.0%
!! CATAGTTGTTAATTAGAAAA+AGG - chr7_2:69516922-69516941 Msa1072430:CDS 20.0%
!! TTTGTAATTAAAACAGACAA+TGG - chr7_2:69517348-69517367 Msa1072430:intron 20.0%
!! ACCGAAAAAATTAAAATCAA+AGG - chr7_2:69517372-69517391 Msa1072430:intron 20.0%
!!! CCCTTTGATTTTAATTTTTT+CGG + chr7_2:69517376-69517395 None:intergenic 20.0%
!! CCGAAAAAATTAAAATCAAA+GGG - chr7_2:69517373-69517392 Msa1072430:intron 20.0%
!! CGAAAAAATTAAAATCAAAG+GGG - chr7_2:69517374-69517393 Msa1072430:intron 20.0%
!! GAAAAAATTAAAATCAAAGG+GGG - chr7_2:69517375-69517394 Msa1072430:intron 20.0%
!!! CATGGTTTAAATTTTGAATT+GGG - chr7_2:69517513-69517532 Msa1072430:CDS 20.0%
!! ATAGAAATATTGGTATGTAT+TGG + chr7_2:69517770-69517789 None:intergenic 20.0%
!!! ATTAAAATGACTTCTTTTTC+TGG - chr7_2:69517903-69517922 Msa1072430:intron 20.0%
!!! TTATAGAACTACAAAGTTTT+AGG - chr7_2:69518311-69518330 Msa1072430:intron 20.0%
!! AAAATGAATACAACAATTTG+TGG + chr7_2:69518549-69518568 None:intergenic 20.0%
!!! CAATAATTTTGGCAAAAAAA+CGG + chr7_2:69518715-69518734 None:intergenic 20.0%
!!! CTGTTAAATTTTATATCTTC+CGG - chr7_2:69518856-69518875 Msa1072430:intron 20.0%
!!! TGTTAGTATTATTTTGTTGT+TGG - chr7_2:69518962-69518981 Msa1072430:CDS 20.0%
!!! TTTTTCTATTGATAACTCTT+CGG + chr7_2:69519336-69519355 None:intergenic 20.0%
!! TATATAGAAAGAAAGAAAGA+AGG + chr7_2:69519683-69519702 None:intergenic 20.0%
!!! TTTTAATAAAACTTTAAGGG+AGG + chr7_2:69519734-69519753 None:intergenic 20.0%
!! CATCAATCATGAAATAATTA+AGG + chr7_2:69519798-69519817 None:intergenic 20.0%
!!! GAAAAAATTAAAACGACTTT+TGG + chr7_2:69519867-69519886 None:intergenic 20.0%
!! AATGATTACTTCATATGTAT+GGG + chr7_2:69520011-69520030 None:intergenic 20.0%
!! TAATGATTACTTCATATGTA+TGG + chr7_2:69520012-69520031 None:intergenic 20.0%
!! ATACATATGAAGTAATCATT+AGG - chr7_2:69520011-69520030 Msa1072430:intron 20.0%
!! CAAAAAACTATGAATATGAA+AGG + chr7_2:69520403-69520422 None:intergenic 20.0%
!!! CTTTCATATTCATAGTTTTT+TGG - chr7_2:69520401-69520420 Msa1072430:intron 20.0%
!!! ATGTTTTTTCTAAACTAAAG+GGG - chr7_2:69520509-69520528 Msa1072430:intron 20.0%
!!! GTTAAAGAATTATTTTCAGT+TGG - chr7_2:69521158-69521177 Msa1072430:intron 20.0%
!!! TCTAGTGAATTTTTGTTTTG+TGG - chr7_2:69516821-69516840 Msa1072430:three_prime_UTR 25.0%
! AACAAATTGGATACTAGAAA+AGG - chr7_2:69517323-69517342 Msa1072430:intron 25.0%
!! GCATGGTTTAAATTTTGAAT+TGG - chr7_2:69517512-69517531 Msa1072430:intron 25.0%
!!! ATGTGAGTTGATCATAAATA+AGG - chr7_2:69517734-69517753 Msa1072430:intron 25.0%
! ATCAAAAGATAAAAAACGGA+GGG - chr7_2:69517830-69517849 Msa1072430:intron 25.0%
! ATCTCTAGTCTCTATTTAAT+GGG - chr7_2:69518141-69518160 Msa1072430:intron 25.0%
! TAATTCCAATTGGAATTTCT+AGG + chr7_2:69518294-69518313 None:intergenic 25.0%
!! TGTAGTTCTATAATTCCAAT+TGG + chr7_2:69518304-69518323 None:intergenic 25.0%
! TAAAAGAAACCAAGTTACAA+GGG - chr7_2:69518341-69518360 Msa1072430:intron 25.0%
! TCATTGTATACTTTCTTTCA+AGG + chr7_2:69518631-69518650 None:intergenic 25.0%
!! AGAAAGTATACAATGATGTT+TGG - chr7_2:69518635-69518654 Msa1072430:intron 25.0%
!!! ATTTTGAGTAACTCAAACAA+AGG - chr7_2:69518886-69518905 Msa1072430:CDS 25.0%
!!! TATTATTTTGTTGTTGGTGT+TGG - chr7_2:69518968-69518987 Msa1072430:CDS 25.0%
! TAGAAAAAGATCGAAAACTA+AGG - chr7_2:69519348-69519367 Msa1072430:CDS 25.0%
! ATTGAAATTCTAAACTCACT+TGG - chr7_2:69519569-69519588 Msa1072430:intron 25.0%
!!! AATGTTTTTTCCAAACTAGA+GGG + chr7_2:69519769-69519788 None:intergenic 25.0%
!!! TAATGTTTTTTCCAAACTAG+AGG + chr7_2:69519770-69519789 None:intergenic 25.0%
! AATCATGAAATAATTAAGGG+AGG + chr7_2:69519794-69519813 None:intergenic 25.0%
!! TACAAAAAAAACAGAAGCAT+TGG + chr7_2:69519932-69519951 None:intergenic 25.0%
!!! ATGCTTCTGTTTTTTTTGTA+TGG - chr7_2:69519932-69519951 Msa1072430:intron 25.0%
! ATCATTAGGCAACATAAAAA+TGG - chr7_2:69520025-69520044 Msa1072430:intron 25.0%
!!! TAAAAGTATTTCACTTCTCA+AGG - chr7_2:69520086-69520105 Msa1072430:intron 25.0%
!!! TTTTAATGGTTACTTTTGAC+AGG + chr7_2:69520247-69520266 None:intergenic 25.0%
! TAGTTAACAGTGTTAATCTA+AGG - chr7_2:69520479-69520498 Msa1072430:intron 25.0%
! AGTTAACAGTGTTAATCTAA+GGG - chr7_2:69520480-69520499 Msa1072430:intron 25.0%
!!! TGTTTTTTCTAAACTAAAGG+GGG - chr7_2:69520510-69520529 Msa1072430:intron 25.0%
!! TGTCTTTTAATAAAACCTCA+AGG - chr7_2:69520539-69520558 Msa1072430:intron 25.0%
!! GTCTTTTAATAAAACCTCAA+GGG - chr7_2:69520540-69520559 Msa1072430:intron 25.0%
! TCAAAATCTTATTATCATGC+AGG - chr7_2:69520580-69520599 Msa1072430:intron 25.0%
! GAAATTTATCAGCTTCATTA+CGG + chr7_2:69520620-69520639 None:intergenic 25.0%
! GACAAAAATTATACTTCAGA+AGG + chr7_2:69520782-69520801 None:intergenic 25.0%
!!! TAAGAGATTTTTCAGAGAAT+GGG + chr7_2:69520831-69520850 None:intergenic 25.0%
!!! TTAAGAGATTTTTCAGAGAA+TGG + chr7_2:69520832-69520851 None:intergenic 25.0%
! AAAATATAAACGAAAGAGGT+CGG + chr7_2:69520874-69520893 None:intergenic 25.0%
!! ACCTCTTTCGTTTATATTTT+TGG - chr7_2:69520874-69520893 Msa1072430:intron 25.0%
! TATTCTTATACACATTTGTG+AGG + chr7_2:69521122-69521141 None:intergenic 25.0%
! TTACACGTTTCTTAAGATAT+AGG - chr7_2:69521271-69521290 Msa1072430:intron 25.0%
! ATACTTCAAGAATTCAGAAA+GGG - chr7_2:69521402-69521421 Msa1072430:intron 25.0%
! TAATACTAATTCCCCTTAAA+AGG + chr7_2:69521704-69521723 None:intergenic 25.0%
! CTCATAATTTCTGTATTCTT+TGG - chr7_2:69521906-69521925 Msa1072430:CDS 25.0%
TGTTGAAGAGGAAATGAAAT+TGG + chr7_2:69516506-69516525 None:intergenic 30.0%
!! TTAGTACCTTTTGCTTTTGA+CGG - chr7_2:69516741-69516760 Msa1072430:three_prime_UTR 30.0%
TCAACTATTAGGTTAAGCTT+TGG - chr7_2:69516986-69517005 Msa1072430:CDS 30.0%
!!! CAGTAGTTTTGAATTTTGCT+TGG - chr7_2:69517018-69517037 Msa1072430:CDS 30.0%
TTGATATTGCGACAAATAGT+AGG - chr7_2:69517132-69517151 Msa1072430:CDS 30.0%
TGATATTGCGACAAATAGTA+GGG - chr7_2:69517133-69517152 Msa1072430:CDS 30.0%
ATCGAGAACAAGAAACAAAT+TGG - chr7_2:69517310-69517329 Msa1072430:intron 30.0%
! TTTTCAACAAGGGTAAACTT+GGG + chr7_2:69517668-69517687 None:intergenic 30.0%
!! TTTTTCAACAAGGGTAAACT+TGG + chr7_2:69517669-69517688 None:intergenic 30.0%
!! TATGGTGTGTTTTTCAACAA+GGG + chr7_2:69517678-69517697 None:intergenic 30.0%
!! TTATGGTGTGTTTTTCAACA+AGG + chr7_2:69517679-69517698 None:intergenic 30.0%
ACACACCATAAAACTATTCA+AGG - chr7_2:69517688-69517707 Msa1072430:intron 30.0%
!! CAACTCCTTGAATAGTTTTA+TGG + chr7_2:69517696-69517715 None:intergenic 30.0%
!!! TCTTTTGATGTTTTAGCTCT+TGG + chr7_2:69517819-69517838 None:intergenic 30.0%
CATCAAAAGATAAAAAACGG+AGG - chr7_2:69517829-69517848 Msa1072430:intron 30.0%
TGTTAGTAAAGAGTAGAGAA+GGG - chr7_2:69517859-69517878 Msa1072430:intron 30.0%
! GCTTGTTTGAACTTGATTTT+TGG - chr7_2:69518012-69518031 Msa1072430:intron 30.0%
CATCTCTAGTCTCTATTTAA+TGG - chr7_2:69518140-69518159 Msa1072430:intron 30.0%
AGTCTCTATTTAATGGGAAA+AGG - chr7_2:69518147-69518166 Msa1072430:intron 30.0%
! TCTTTGGGTTAACTTATTAC+AGG + chr7_2:69518259-69518278 None:intergenic 30.0%
! AATTGGAATTTCTAGGAGAT+TGG + chr7_2:69518287-69518306 None:intergenic 30.0%
AATCTCCTAGAAATTCCAAT+TGG - chr7_2:69518286-69518305 Msa1072430:intron 30.0%
! CTTGTAACTTGGTTTCTTTT+AGG + chr7_2:69518342-69518361 None:intergenic 30.0%
CTAAAAGAAACCAAGTTACA+AGG - chr7_2:69518340-69518359 Msa1072430:intron 30.0%
TATATGTGGTTTCTGTCTAT+GGG + chr7_2:69518497-69518516 None:intergenic 30.0%
TTATATGTGGTTTCTGTCTA+TGG + chr7_2:69518498-69518517 None:intergenic 30.0%
AGTTCAAGTAAACTTATGGA+GGG + chr7_2:69518596-69518615 None:intergenic 30.0%
AGAGAGTTCAAGTAAACTTA+TGG + chr7_2:69518600-69518619 None:intergenic 30.0%
! GAGATACAATGATAACGATA+GGG + chr7_2:69518773-69518792 None:intergenic 30.0%
! AGAGATACAATGATAACGAT+AGG + chr7_2:69518774-69518793 None:intergenic 30.0%
GTTACTCAAAATTCAAATGC+CGG + chr7_2:69518878-69518897 None:intergenic 30.0%
ACTCAAACAAAGGAAATAGT+TGG - chr7_2:69518896-69518915 Msa1072430:CDS 30.0%
CTCAAACAAAGGAAATAGTT+GGG - chr7_2:69518897-69518916 Msa1072430:CDS 30.0%
! TATTGATAACTCTTCGGATA+AGG + chr7_2:69519330-69519349 None:intergenic 30.0%
AAAGATCGAAAACTAAGGAT+CGG - chr7_2:69519353-69519372 Msa1072430:CDS 30.0%
CTCTCAAAATTATCCAATAC+AGG + chr7_2:69519470-69519489 None:intergenic 30.0%
TAACTTACCATTGGATCAAA+GGG + chr7_2:69519623-69519642 None:intergenic 30.0%
TTAACTTACCATTGGATCAA+AGG + chr7_2:69519624-69519643 None:intergenic 30.0%
!!! ATGTTTTTTCCAAACTAGAG+GGG + chr7_2:69519768-69519787 None:intergenic 30.0%
TTTGTATGGAAAATATGGTC+TGG - chr7_2:69519946-69519965 Msa1072430:intron 30.0%
GCTTGACATGTACAAAATTA+AGG + chr7_2:69520065-69520084 None:intergenic 30.0%
!!! AGCGTGATGTTGATTTTTAA+TGG + chr7_2:69520207-69520226 None:intergenic 30.0%
AAAAATCAACATCACGCTTT+CGG - chr7_2:69520209-69520228 Msa1072430:intron 30.0%
GTAACCATTAAAAACGAGAA+CGG - chr7_2:69520254-69520273 Msa1072430:intron 30.0%
TGTTTGTATGAGATTAAGCA+AGG - chr7_2:69520308-69520327 Msa1072430:intron 30.0%
TTTGGGAGAAAAAGCAAATT+AGG - chr7_2:69520419-69520438 Msa1072430:intron 30.0%
TTGGGAGAAAAAGCAAATTA+GGG - chr7_2:69520420-69520439 Msa1072430:intron 30.0%
TATATGTTAGAGCTAAGTAC+TGG - chr7_2:69520443-69520462 Msa1072430:intron 30.0%
! TTTTAATAAAACCTCAAGGG+AGG - chr7_2:69520543-69520562 Msa1072430:intron 30.0%
TACCTGTCTTTCAATATTGT+TGG - chr7_2:69520695-69520714 Msa1072430:intron 30.0%
GCCAAAAATATAAACGAAAG+AGG + chr7_2:69520878-69520897 None:intergenic 30.0%
TGTCATCTATGATTTATGCA+GGG - chr7_2:69520905-69520924 Msa1072430:intron 30.0%
ACACTATATCAAGTTTCTTC+AGG - chr7_2:69520980-69520999 Msa1072430:intron 30.0%
!! TAAGAGTTAAAAGTGTTTCC+AGG + chr7_2:69521017-69521036 None:intergenic 30.0%
GATTCTGATGAATTTGAAGA+TGG - chr7_2:69521375-69521394 Msa1072430:intron 30.0%
CATACTTCAAGAATTCAGAA+AGG - chr7_2:69521401-69521420 Msa1072430:intron 30.0%
!!! TTCAGAAAGGGTTTTAAACT+TGG - chr7_2:69521414-69521433 Msa1072430:intron 30.0%
TATCTATCAGTTTAATCTCC+AGG - chr7_2:69521628-69521647 Msa1072430:intron 30.0%
! AGATATGACTATATTTTCCC+AGG - chr7_2:69521775-69521794 Msa1072430:CDS 30.0%
ATGAAATTGGTGGGAAATGA+GGG + chr7_2:69516493-69516512 None:intergenic 35.0%
AATGAAATTGGTGGGAAATG+AGG + chr7_2:69516494-69516513 None:intergenic 35.0%
GAAGAGGAAATGAAATTGGT+GGG + chr7_2:69516502-69516521 None:intergenic 35.0%
TGAAGAGGAAATGAAATTGG+TGG + chr7_2:69516503-69516522 None:intergenic 35.0%
CTGCTACAGAATCAACTATT+AGG - chr7_2:69516975-69516994 Msa1072430:CDS 35.0%
!!! GTGTCACTTATTTTCAGACA+TGG - chr7_2:69517082-69517101 Msa1072430:CDS 35.0%
CGGTATAACAACTACAATTG+TGG + chr7_2:69517176-69517195 None:intergenic 35.0%
TTGTAGTTGTTATACCGTTG+CGG - chr7_2:69517179-69517198 Msa1072430:intron 35.0%
! CAGACTGCAATTTAAAACCA+TGG - chr7_2:69517242-69517261 Msa1072430:intron 35.0%
! GGAAAACAAGTTGAAAACCA+TGG + chr7_2:69517262-69517281 None:intergenic 35.0%
!!! AAGGGGGAATTTGTTTTTTC+TGG - chr7_2:69517391-69517410 Msa1072430:intron 35.0%
ATTGGCTATCATGTAGTGTA+AGG - chr7_2:69517475-69517494 Msa1072430:intron 35.0%
ACTCACATGTGATAAGCTAA+AGG + chr7_2:69517722-69517741 None:intergenic 35.0%
CTGTTAGTAAAGAGTAGAGA+AGG - chr7_2:69517858-69517877 Msa1072430:intron 35.0%
! TTAATGGGAAAAGGCTTTGA+TGG - chr7_2:69518156-69518175 Msa1072430:intron 35.0%
CAAGGACTTATGATGCTAAT+GGG + chr7_2:69518412-69518431 None:intergenic 35.0%
CATTAGCATCATAAGTCCTT+GGG - chr7_2:69518411-69518430 Msa1072430:intron 35.0%
ATTAGCATCATAAGTCCTTG+GGG - chr7_2:69518412-69518431 Msa1072430:intron 35.0%
GAGTTCAAGTAAACTTATGG+AGG + chr7_2:69518597-69518616 None:intergenic 35.0%
GGAAAAGATATTGAGAGAGA+TGG + chr7_2:69518694-69518713 None:intergenic 35.0%
CCAGCAAATTAACACAAACA+AGG + chr7_2:69519080-69519099 None:intergenic 35.0%
!! CCTTGTTTGTGTTAATTTGC+TGG - chr7_2:69519077-69519096 Msa1072430:CDS 35.0%
GACTGAAGTAATACTATCAG+AGG + chr7_2:69519200-69519219 None:intergenic 35.0%
!! TCCATTGATGATGAGATAGT+AGG - chr7_2:69519284-69519303 Msa1072430:CDS 35.0%
ACCTACTATCTCATCATCAA+TGG + chr7_2:69519288-69519307 None:intergenic 35.0%
ATGAGATAGTAGGTCTTGAA+GGG - chr7_2:69519294-69519313 Msa1072430:CDS 35.0%
GTGCAGACTTTGACAATTAT+CGG - chr7_2:69519375-69519394 Msa1072430:intron 35.0%
!!! TGTTTTTTCCAAACTAGAGG+GGG + chr7_2:69519767-69519786 None:intergenic 35.0%
TAACAGCTGTTAGTGTCTAT+GGG + chr7_2:69519828-69519847 None:intergenic 35.0%
!! ATACAGCTAAAGCATTGTAG+TGG - chr7_2:69520178-69520197 Msa1072430:intron 35.0%
!!! AATGGTTACTTTTGACAGGA+AGG + chr7_2:69520243-69520262 None:intergenic 35.0%
!! CATTCCGTTCTCGTTTTTAA+TGG + chr7_2:69520261-69520280 None:intergenic 35.0%
CATTAAAAACGAGAACGGAA+TGG - chr7_2:69520259-69520278 Msa1072430:intron 35.0%
TTTGGTGGAAAACTGATGAA+AGG - chr7_2:69520367-69520386 Msa1072430:intron 35.0%
TAACAGTGTTAATCTAAGGG+AGG - chr7_2:69520483-69520502 Msa1072430:intron 35.0%
! TTGTTGGCGATCAATGTTTT+TGG - chr7_2:69520711-69520730 Msa1072430:intron 35.0%
CTGTCATCTATGATTTATGC+AGG - chr7_2:69520904-69520923 Msa1072430:intron 35.0%
GTCATCTATGATTTATGCAG+GGG - chr7_2:69520906-69520925 Msa1072430:intron 35.0%
CATTCTTAAACTCACCAAGT+TGG + chr7_2:69521061-69521080 None:intergenic 35.0%
ACTGCCTCAAATGAAACATT+TGG - chr7_2:69521221-69521240 Msa1072430:intron 35.0%
AGCACCAAATGTTTCATTTG+AGG + chr7_2:69521228-69521247 None:intergenic 35.0%
!! CAAATGAAACATTTGGTGCT+TGG - chr7_2:69521228-69521247 Msa1072430:intron 35.0%
ACTTGTACAAAACTGAATCC+AGG + chr7_2:69521607-69521626 None:intergenic 35.0%
AATCTCCAGGAACGTAATTA+TGG - chr7_2:69521641-69521660 Msa1072430:intron 35.0%
ATCTCCAGGAACGTAATTAT+GGG - chr7_2:69521642-69521661 Msa1072430:intron 35.0%
ATTCCCCTTAAAAGGAAACT+TGG + chr7_2:69521696-69521715 None:intergenic 35.0%
TTGAACAATTGCAACTCACT+CGG + chr7_2:69521822-69521841 None:intergenic 35.0%
GTTGCAATTGTTCAAGTGTT+TGG - chr7_2:69521827-69521846 Msa1072430:CDS 35.0%
ATTGGCGAATTGTGTTGAAG+AGG + chr7_2:69516518-69516537 None:intergenic 40.0%
ATCGGAAGAAGATAAGGGTA+AGG + chr7_2:69516546-69516565 None:intergenic 40.0%
TTACCCTTATCTTCTTCCGA+TGG - chr7_2:69516545-69516564 Msa1072430:three_prime_UTR 40.0%
! AAGGTACTAACTTGACGAAC+CGG + chr7_2:69516731-69516750 None:intergenic 40.0%
GTATCTCCGTCAAAAGCAAA+AGG + chr7_2:69516750-69516769 None:intergenic 40.0%
TCAGGTGAATCTTGAACTTG+AGG + chr7_2:69516780-69516799 None:intergenic 40.0%
TCAAGTTCAAGATTCACCTG+AGG - chr7_2:69516779-69516798 Msa1072430:three_prime_UTR 40.0%
TGTAGTTGTTATACCGTTGC+GGG - chr7_2:69517180-69517199 Msa1072430:intron 40.0%
CAATCGCGGCTGTAATATAA+AGG + chr7_2:69517216-69517235 None:intergenic 40.0%
TGAATTGGGTGTAGAAGTGA+TGG - chr7_2:69517527-69517546 Msa1072430:CDS 40.0%
GTCCTGTAAAGAAGACAGTT+TGG - chr7_2:69517933-69517952 Msa1072430:intron 40.0%
AGCCAAACTGTCTTCTTTAC+AGG + chr7_2:69517938-69517957 None:intergenic 40.0%
!!! TTTTTTGTCAGCTTCTCGAG+AGG + chr7_2:69518218-69518237 None:intergenic 40.0%
!! AGGAGATTGGAAGCATCTTT+GGG + chr7_2:69518274-69518293 None:intergenic 40.0%
!! TAGGAGATTGGAAGCATCTT+TGG + chr7_2:69518275-69518294 None:intergenic 40.0%
AGTGCTAAGGATTACGATTC+AGG + chr7_2:69518374-69518393 None:intergenic 40.0%
CCAAGGACTTATGATGCTAA+TGG + chr7_2:69518413-69518432 None:intergenic 40.0%
CCATTAGCATCATAAGTCCT+TGG - chr7_2:69518410-69518429 Msa1072430:intron 40.0%
TTAGCATCATAAGTCCTTGG+GGG - chr7_2:69518413-69518432 Msa1072430:intron 40.0%
TCTGTAGAGTCCTGTTGAAT+TGG + chr7_2:69519107-69519126 None:intergenic 40.0%
ATTCAACAGGACTCTACAGA+TGG - chr7_2:69519107-69519126 Msa1072430:CDS 40.0%
AATACTATCAGAGGTGAAGC+AGG + chr7_2:69519191-69519210 None:intergenic 40.0%
GATGAGATAGTAGGTCTTGA+AGG - chr7_2:69519293-69519312 Msa1072430:CDS 40.0%
AACAGCTGTTAGTGTCTATG+GGG + chr7_2:69519827-69519846 None:intergenic 40.0%
GTAACAGCTGTTAGTGTCTA+TGG + chr7_2:69519829-69519848 None:intergenic 40.0%
AGAGTTGAAGAGACGAACAT+TGG + chr7_2:69519889-69519908 None:intergenic 40.0%
TATGGTCTGGTCAAAATCCT+CGG - chr7_2:69519959-69519978 Msa1072430:intron 40.0%
AGTATTTCACTTCTCAAGGC+AGG - chr7_2:69520090-69520109 Msa1072430:intron 40.0%
CTTCTCAAGGCAGGAAAAAA+TGG - chr7_2:69520099-69520118 Msa1072430:intron 40.0%
AACGGAATGGTTCAGTACAA+GGG - chr7_2:69520272-69520291 Msa1072430:intron 40.0%
TTAAGCAAGGTGTAAGAGAC+AGG - chr7_2:69520321-69520340 Msa1072430:intron 40.0%
AAGGTGTAAGAGACAGGTAA+TGG - chr7_2:69520327-69520346 Msa1072430:intron 40.0%
GTGGAAAACTGATGAAAGGT+CGG - chr7_2:69520371-69520390 Msa1072430:intron 40.0%
!! TAGAGCTAAGTACTGGATGT+AGG - chr7_2:69520450-69520469 Msa1072430:intron 40.0%
CGCCAACAATATTGAAAGAC+AGG + chr7_2:69520700-69520719 None:intergenic 40.0%
!!! TTGGCGATCAATGTTTTTGG+TGG - chr7_2:69520714-69520733 Msa1072430:intron 40.0%
!! AAAAGTGTTTCCAGGTCTTC+AGG + chr7_2:69521009-69521028 None:intergenic 40.0%
TCAATTGTTTCGAGCCAACT+TGG - chr7_2:69521044-69521063 Msa1072430:intron 40.0%
TCACAGAGTCGAGAAAAAGT+AGG - chr7_2:69521083-69521102 Msa1072430:intron 40.0%
ACATGAAGCAATTATGCGTG+AGG - chr7_2:69521353-69521372 Msa1072430:intron 40.0%
GTCATTCTCTTTACTGTCCT+GGG + chr7_2:69521544-69521563 None:intergenic 40.0%
CAGGACAGTAAAGAGAATGA+CGG - chr7_2:69521543-69521562 Msa1072430:intron 40.0%
AACACCCATAATTACGTTCC+TGG + chr7_2:69521649-69521668 None:intergenic 40.0%
! TCCTGCCAAGTTTCCTTTTA+AGG - chr7_2:69521688-69521707 Msa1072430:intron 40.0%
! CCTGCCAAGTTTCCTTTTAA+GGG - chr7_2:69521689-69521708 Msa1072430:intron 40.0%
! CTGCCAAGTTTCCTTTTAAG+GGG - chr7_2:69521690-69521709 Msa1072430:intron 40.0%
! CAGATTTTTATGCCCTTGCA+TGG - chr7_2:69521745-69521764 Msa1072430:CDS 40.0%
TATCTACCAAAGCCATGCAA+GGG + chr7_2:69521760-69521779 None:intergenic 40.0%
ATATCTACCAAAGCCATGCA+AGG + chr7_2:69521761-69521780 None:intergenic 40.0%
CTTTCAGAAACATGGTACCT+GGG + chr7_2:69521795-69521814 None:intergenic 40.0%
TGAACAATTGCAACTCACTC+GGG + chr7_2:69521821-69521840 None:intergenic 40.0%
GGAAGAAGATAAGGGTAAGG+TGG + chr7_2:69516543-69516562 None:intergenic 45.0%
TGGCCATCGGAAGAAGATAA+GGG + chr7_2:69516551-69516570 None:intergenic 45.0%
! TCTGGAGTGATTAGAAGAGG+TGG + chr7_2:69516628-69516647 None:intergenic 45.0%
!! GGTTCTGGAGTGATTAGAAG+AGG + chr7_2:69516631-69516650 None:intergenic 45.0%
AAGAGGTGAAGGTCTTCTTC+TGG + chr7_2:69516676-69516695 None:intergenic 45.0%
CTTCACCTCTTAAATCCCAC+CGG - chr7_2:69516685-69516704 Msa1072430:three_prime_UTR 45.0%
AGGTACTAACTTGACGAACC+GGG + chr7_2:69516730-69516749 None:intergenic 45.0%
! ATCTTGAACTTGAGGTGCCT+CGG + chr7_2:69516772-69516791 None:intergenic 45.0%
TCAAGATTCACCTGAGGTTC+AGG - chr7_2:69516785-69516804 Msa1072430:three_prime_UTR 45.0%
GTAGTTGTTATACCGTTGCG+GGG - chr7_2:69517181-69517200 Msa1072430:intron 45.0%
TAGTTGTTATACCGTTGCGG+GGG - chr7_2:69517182-69517201 Msa1072430:intron 45.0%
AGGTGTCTGAGAGAAATGCA+TGG - chr7_2:69517495-69517514 Msa1072430:intron 45.0%
ATTGGGTGTAGAAGTGATGG+AGG - chr7_2:69517530-69517549 Msa1072430:CDS 45.0%
! TTGGGTGTAGAAGTGATGGA+GGG - chr7_2:69517531-69517550 Msa1072430:CDS 45.0%
! GTGATGGAGGGTAGAATCTA+AGG - chr7_2:69517543-69517562 Msa1072430:CDS 45.0%
! TGGAGGGTAGAATCTAAGGT+AGG - chr7_2:69517547-69517566 Msa1072430:CDS 45.0%
AGCTCTTGGCACAAGTCTTA+AGG + chr7_2:69517805-69517824 None:intergenic 45.0%
GTAAAGAGTAGAGAAGGGTC+TGG - chr7_2:69517864-69517883 Msa1072430:intron 45.0%
CAAACAAGCGTGCACTACAT+TGG + chr7_2:69518001-69518020 None:intergenic 45.0%
GGAGTTGTTCCCTTGTAACT+TGG + chr7_2:69518353-69518372 None:intergenic 45.0%
!! GGCGTTGGTAATAAGTGCTA+AGG + chr7_2:69518387-69518406 None:intergenic 45.0%
! GACTTATGATGCTAATGGGC+TGG + chr7_2:69518408-69518427 None:intergenic 45.0%
AGGGAGAGTAGCAGATATAG+TGG + chr7_2:69518577-69518596 None:intergenic 45.0%
TGCTGGTACACCAATTCAAC+AGG - chr7_2:69519094-69519113 Msa1072430:CDS 45.0%
TGCAGTCAAAGTTGCTGAGT+TGG - chr7_2:69519247-69519266 Msa1072430:CDS 45.0%
CATTTGTGACCAGTGAAAGG+CGG + chr7_2:69519418-69519437 None:intergenic 45.0%
GAGCATTTGTGACCAGTGAA+AGG + chr7_2:69519421-69519440 None:intergenic 45.0%
TCACTGGTCACAAATGCTCA+AGG - chr7_2:69519422-69519441 Msa1072430:intron 45.0%
CACTGGTCACAAATGCTCAA+GGG - chr7_2:69519423-69519442 Msa1072430:intron 45.0%
ACTGGTCACAAATGCTCAAG+GGG - chr7_2:69519424-69519443 Msa1072430:intron 45.0%
AAATGCTCAAGGGGAAGTTG+TGG - chr7_2:69519433-69519452 Msa1072430:intron 45.0%
!! GGAGAGTTTGTTGCCTGTAT+TGG - chr7_2:69519454-69519473 Msa1072430:intron 45.0%
GAGAGCTAAAGCTCAGATCA+AGG - chr7_2:69519487-69519506 Msa1072430:intron 45.0%
AGCTAAAGCTCAGATCAAGG+TGG - chr7_2:69519490-69519509 Msa1072430:intron 45.0%
TGGAAGTCCCTTTGATCCAA+TGG - chr7_2:69519613-69519632 Msa1072430:intron 45.0%
ATGGTCTGGTCAAAATCCTC+GGG - chr7_2:69519960-69519979 Msa1072430:intron 45.0%
GAACGGAATGGTTCAGTACA+AGG - chr7_2:69520271-69520290 Msa1072430:intron 45.0%
! AAGAGACAGGTAATGGTGTG+AGG - chr7_2:69520334-69520353 Msa1072430:intron 45.0%
!! GTGTGAGGCTAGTTGTGTTT+TGG - chr7_2:69520349-69520368 Msa1072430:intron 45.0%
!! TGAGGCTAGTTGTGTTTTGG+TGG - chr7_2:69520352-69520371 Msa1072430:intron 45.0%
CGATTGAATTTCGAGCCAAC+TGG + chr7_2:69520938-69520957 None:intergenic 45.0%
! TTCATTTGAGGCAGTAGCTG+AGG + chr7_2:69521216-69521235 None:intergenic 45.0%
! TCACCATTGATGGACGTAAG+AGG + chr7_2:69521446-69521465 None:intergenic 45.0%
CTTACGTCCATCAATGGTGA+AGG - chr7_2:69521446-69521465 Msa1072430:intron 45.0%
GCTGATACCTTCACCATTGA+TGG + chr7_2:69521456-69521475 None:intergenic 45.0%
!! TCAATGGTGAAGGTATCAGC+TGG - chr7_2:69521456-69521475 Msa1072430:intron 45.0%
!! TTGGTGACTTGTTCTTCCTG+TGG + chr7_2:69521513-69521532 None:intergenic 45.0%
AGTCACCAATGAAACTTCCC+AGG - chr7_2:69521524-69521543 Msa1072430:intron 45.0%
ACTGTCCTGGGAAGTTTCAT+TGG + chr7_2:69521532-69521551 None:intergenic 45.0%
CGTCATTCTCTTTACTGTCC+TGG + chr7_2:69521545-69521564 None:intergenic 45.0%
AGAAACAGAGTCCGCTTGAA+AGG - chr7_2:69521572-69521591 Msa1072430:intron 45.0%
GGCAAAGTTGTCCTTTCAAG+CGG + chr7_2:69521586-69521605 None:intergenic 45.0%
CTTGAAAGGACAACTTTGCC+TGG - chr7_2:69521586-69521605 Msa1072430:intron 45.0%
CCCTTAAAAGGAAACTTGGC+AGG + chr7_2:69521692-69521711 None:intergenic 45.0%
TTTATGCCCTTGCATGGCTT+TGG - chr7_2:69521751-69521770 Msa1072430:CDS 45.0%
CCTTTCAGAAACATGGTACC+TGG + chr7_2:69521796-69521815 None:intergenic 45.0%
! CCAGGTACCATGTTTCTGAA+AGG - chr7_2:69521793-69521812 Msa1072430:CDS 45.0%
GAACAATTGCAACTCACTCG+GGG + chr7_2:69521820-69521839 None:intergenic 45.0%
TTGTTCAAGTGTTTGGCACC+TGG - chr7_2:69521834-69521853 Msa1072430:CDS 45.0%
!! ACACTGATTCTCCTAACTCC+AGG + chr7_2:69521855-69521874 None:intergenic 45.0%
GATAAGGGTAAGGTGGCGAT+TGG + chr7_2:69516536-69516555 None:intergenic 50.0%
GTGGCCATCGGAAGAAGATA+AGG + chr7_2:69516552-69516571 None:intergenic 50.0%
GGAGTGATTAGAAGAGGTGG+CGG + chr7_2:69516625-69516644 None:intergenic 50.0%
! TCTTCTTCTGGAGGATGCGA+CGG + chr7_2:69516664-69516683 None:intergenic 50.0%
AGGTGAAGGTCTTCTTCTGG+AGG + chr7_2:69516673-69516692 None:intergenic 50.0%
CGGTGGGATTTAAGAGGTGA+AGG + chr7_2:69516687-69516706 None:intergenic 50.0%
! CCTCTTAAATCCCACCGGTT+CGG - chr7_2:69516690-69516709 Msa1072430:three_prime_UTR 50.0%
GAGTGGGAATTGAACCGAAC+CGG + chr7_2:69516707-69516726 None:intergenic 50.0%
GGTACTAACTTGACGAACCG+GGG + chr7_2:69516729-69516748 None:intergenic 50.0%
! TGCTTTTGACGGAGATACCG+AGG - chr7_2:69516752-69516771 Msa1072430:three_prime_UTR 50.0%
! TTCACCTGAGGTTCAGGTTC+TGG - chr7_2:69516791-69516810 Msa1072430:three_prime_UTR 50.0%
CTTACCAGAACCTGAACCTC+AGG + chr7_2:69516798-69516817 None:intergenic 50.0%
!!! AGGTTTTAGATCCCCCGCAA+CGG + chr7_2:69517196-69517215 None:intergenic 50.0%
AAGAGTAGAGAAGGGTCTGG+CGG - chr7_2:69517867-69517886 Msa1072430:intron 50.0%
TGCACTACATTGGACGGTCA+TGG + chr7_2:69517991-69518010 None:intergenic 50.0%
CAAGCGTGCACTACATTGGA+CGG + chr7_2:69517997-69518016 None:intergenic 50.0%
CTAGTACTTGTAAGCCCCCA+AGG + chr7_2:69518430-69518449 None:intergenic 50.0%
!! TACAGATGGTGCTGCTGATG+TGG - chr7_2:69519121-69519140 Msa1072430:CDS 50.0%
AGATAGAGACCGCCTTTCAC+TGG - chr7_2:69519406-69519425 Msa1072430:intron 50.0%
TCAGATCAAGGTGGAGACAG+AGG - chr7_2:69519499-69519518 Msa1072430:intron 50.0%
CAGATCAAGGTGGAGACAGA+GGG - chr7_2:69519500-69519519 Msa1072430:intron 50.0%
TGGAGTTGAGCCAGTGGATA+CGG - chr7_2:69519589-69519608 Msa1072430:intron 50.0%
AATTGCACTCACCTCCCTTG+AGG + chr7_2:69520557-69520576 None:intergenic 50.0%
! CTTCAGGTTTCCTGAAGACC+TGG - chr7_2:69520996-69521015 Msa1072430:intron 50.0%
! CCATTGATGGACGTAAGAGG+CGG + chr7_2:69521443-69521462 None:intergenic 50.0%
TCCTGTGGTACTTCTTGCTC+CGG + chr7_2:69521498-69521517 None:intergenic 50.0%
TCGGGGTCCTTTCAGAAACA+TGG + chr7_2:69521803-69521822 None:intergenic 50.0%
AGTGTTTGGCACCTGGAGTT+AGG - chr7_2:69521841-69521860 Msa1072430:CDS 50.0%
GAATGTGGGAGTTCGGAGGA+CGG + chr7_2:69516574-69516593 None:intergenic 55.0%
TCCTCCGAACTCCCACATTC+CGG - chr7_2:69516574-69516593 Msa1072430:three_prime_UTR 55.0%
ATGGCCGGAATGTGGGAGTT+CGG + chr7_2:69516581-69516600 None:intergenic 55.0%
! GTGATTAGAAGAGGTGGCGG+CGG + chr7_2:69516622-69516641 None:intergenic 55.0%
CCGAACCGGTGGGATTTAAG+AGG + chr7_2:69516693-69516712 None:intergenic 55.0%
GGGAATTGAACCGAACCGGT+GGG + chr7_2:69516703-69516722 None:intergenic 55.0%
TGGGAATTGAACCGAACCGG+TGG + chr7_2:69516704-69516723 None:intergenic 55.0%
TCGGTTCAATTCCCACTCCC+CGG - chr7_2:69516709-69516728 Msa1072430:three_prime_UTR 55.0%
AACTTGACGAACCGGGGAGT+GGG + chr7_2:69516723-69516742 None:intergenic 55.0%
TAACTTGACGAACCGGGGAG+TGG + chr7_2:69516724-69516743 None:intergenic 55.0%
GCAGTCTGCAACTGCAATCG+CGG + chr7_2:69517230-69517249 None:intergenic 55.0%
GGACGGTCATGGAGTCTGAA+AGG + chr7_2:69517980-69517999 None:intergenic 55.0%
!! TGATGCTAATGGGCTGGCGT+TGG + chr7_2:69518402-69518421 None:intergenic 55.0%
!! AGATGGTGCTGCTGATGTGG+AGG - chr7_2:69519124-69519143 Msa1072430:CDS 55.0%
! GCTGATGTGGAGGAGAGTAC+AGG - chr7_2:69519134-69519153 Msa1072430:CDS 55.0%
! GGAGAGTACAGGCGATGATG+AGG - chr7_2:69519145-69519164 Msa1072430:CDS 55.0%
CTCACTTGGAGTTGAGCCAG+TGG - chr7_2:69519583-69519602 Msa1072430:intron 55.0%
GTTGAGCCAGTGGATACGGT+TGG - chr7_2:69519593-69519612 Msa1072430:intron 55.0%
GGACTTCCAACCGTATCCAC+TGG + chr7_2:69519602-69519621 None:intergenic 55.0%
CACTCACACCCCCTCTAGTT+TGG - chr7_2:69519756-69519775 Msa1072430:intron 55.0%
ATCCTCGGGAGCTCCTTCAA+CGG - chr7_2:69519974-69519993 Msa1072430:intron 55.0%
GGTCAGATGTCTCCCGTTGA+AGG + chr7_2:69519990-69520009 None:intergenic 55.0%
CCGCCTCTTACGTCCATCAA+TGG - chr7_2:69521440-69521459 Msa1072430:intron 55.0%
!! GTGAAGGTATCAGCTGGTCC+AGG - chr7_2:69521462-69521481 Msa1072430:intron 55.0%
GTTGGGGATGGCCGGAATGT+GGG + chr7_2:69516588-69516607 None:intergenic 60.0%
TGAGAAGGGTTGGGGATGGC+CGG + chr7_2:69516596-69516615 None:intergenic 60.0%
GTGGTGAGAAGGGTTGGGGA+TGG + chr7_2:69516600-69516619 None:intergenic 60.0%
! ATTAGAAGAGGTGGCGGCGG+TGG + chr7_2:69516619-69516638 None:intergenic 60.0%
GACGGAAACGCGTGAGGTTC+TGG + chr7_2:69516646-69516665 None:intergenic 60.0%
GATGATGAGGTCAGCGACGC+TGG - chr7_2:69519158-69519177 Msa1072430:CDS 60.0%
CAAGGTGGAGACAGAGGGAG+AGG - chr7_2:69519505-69519524 Msa1072430:intron 60.0%
TCCTCGGGAGCTCCTTCAAC+GGG - chr7_2:69519975-69519994 Msa1072430:intron 60.0%
! ATGCAGGGGCGCAAACCAGT+TGG - chr7_2:69520920-69520939 Msa1072430:intron 60.0%
!! GCCGGAGCAAGAAGTACCAC+AGG - chr7_2:69521494-69521513 Msa1072430:intron 60.0%
GTTCGGAGGACGGTGGCCAT+CGG + chr7_2:69516564-69516583 None:intergenic 65.0%
TGTGGGAGTTCGGAGGACGG+TGG + chr7_2:69516571-69516590 None:intergenic 65.0%
GCCGGAATGTGGGAGTTCGG+AGG + chr7_2:69516578-69516597 None:intergenic 65.0%
GGTTGGGGATGGCCGGAATG+TGG + chr7_2:69516589-69516608 None:intergenic 65.0%
GGCGGTGGTGAGAAGGGTTG+GGG + chr7_2:69516604-69516623 None:intergenic 65.0%
CGGCGGTGGTGAGAAGGGTT+GGG + chr7_2:69516605-69516624 None:intergenic 65.0%
GGATGCGACGGAAACGCGTG+AGG + chr7_2:69516652-69516671 None:intergenic 65.0%
TCCCGTTGAAGGAGCTCCCG+AGG + chr7_2:69519979-69519998 None:intergenic 65.0%
GCGGCGGTGGTGAGAAGGGT+TGG + chr7_2:69516606-69516625 None:intergenic 70.0%
! GGTGGCGGCGGTGGTGAGAA+GGG + chr7_2:69516610-69516629 None:intergenic 70.0%
! AGGTGGCGGCGGTGGTGAGA+AGG + chr7_2:69516611-69516630 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 69516489 69522015 69516489 ID=Msa1072430;Name=Msa1072430
chr7_2 mRNA 69516489 69522015 69516489 ID=Msa1072430-mRNA-1;Parent=Msa1072430;Name=Msa1072430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=75|0.66|0.75|1|1|1|4|425|357
chr7_2 exon 69516489 69517153 69516489 ID=Msa1072430-mRNA-1:exon:15465;Parent=Msa1072430-mRNA-1
chr7_2 exon 69517513 69517578 69517513 ID=Msa1072430-mRNA-1:exon:15464;Parent=Msa1072430-mRNA-1
chr7_2 exon 69518870 69519388 69518870 ID=Msa1072430-mRNA-1:exon:15463;Parent=Msa1072430-mRNA-1
chr7_2 exon 69521692 69522015 69521692 ID=Msa1072430-mRNA-1:exon:15462;Parent=Msa1072430-mRNA-1
chr7_2 five_prime_UTR 69521941 69522015 69521941 ID=Msa1072430-mRNA-1:five_prime_utr;Parent=Msa1072430-mRNA-1
chr7_2 CDS 69521692 69521940 69521692 ID=Msa1072430-mRNA-1:cds;Parent=Msa1072430-mRNA-1
chr7_2 CDS 69518870 69519388 69518870 ID=Msa1072430-mRNA-1:cds;Parent=Msa1072430-mRNA-1
chr7_2 CDS 69517513 69517578 69517513 ID=Msa1072430-mRNA-1:cds;Parent=Msa1072430-mRNA-1
chr7_2 CDS 69516914 69517153 69516914 ID=Msa1072430-mRNA-1:cds;Parent=Msa1072430-mRNA-1
chr7_2 three_prime_UTR 69516489 69516913 69516489 ID=Msa1072430-mRNA-1:three_prime_utr;Parent=Msa1072430-mRNA-1
Gene Sequence

>Msa1072430

ATGGCCACCGTCCTCCGAACTCCCACATTCCGGCCATCCCCAACCCTTCTCACCACCGCCGCCACCTCTTCTAATCACTCCAGAACCTCACGCGTTTCCGTCGCATCCTCCAGAAGAAGACCTTCACCTCTTAAATCCCACCGGTTCGGTTCAATTCCCACTCCCCGGTTCGTCAAGTTAGTACCTTTTGCTTTTGACGGAGATACCGAGGCACCTCAAGTTCAAGATTCACCTGAGGTTCAGGTTCTGGACTCTACAGATGGTGCTGCTGATGTGGAGGAGAGTACAGGCGATGATGAGGTCAGCGACGCTGGTGAAATACCTGCTTCACCTCTGATAGTATTACTTCAGTCATACAAAGAAGCATTAGCTAATAATGATGCAGTCAAAGTTGCTGAGTTGGAATCATCATTAAAATCCATTGATGATGAGATAGTAGGTCTTGAAGGGAAAATAGCTTCCTTATCCGAAGAGTTATCAATAGAAAAAGATCGAAAACTAAGGATCGGTGCAGACTTTGACAATTATCGGAAGAGAACAGATAGAGACCGCCTTTCACTGGTCACAAATGCTCAAGGGGAAGTTGTGGAGAGTTTGTTGCCTGTATTGGATAATTTTGAGAGAGCTAAAGCTCAGATCAAGGTGGAGACAGAGGGAGAGGAGAAAATAAACAACAGCTATCAAAGCATATATAAGCAGTTCATTGAAATTCTAAACTCACTTGGAGTTGAGCCAGTGGATACGGTTGGAAGTCCCTTTGATCCAATGGGGCGCAAACCAGTTGGCTCGAAATTCAATCGTGTACTTGCTGAACTTTTTCAAACACTATATCAACTACATGAAGCAATTATGCGTGAGGATTCTGATGAATTTGAAGATGGCATCATACTTCAAGAATTCAGAAAGGGTTTTAAACTTGGTGACCGCCTCTTACGTCCATCAATGGTGAAGGTATCAGCTGGTCCAGGACCTGCAAAGCCGGAGCAAGAAGTACCACAGGAAGAACAAGTCACCAATGAAACTTCCCAGGACAGTAAAGAGAATGACGGCAACACAGAAACAGAGTCCGCTTGA

Protein sequence

>Msa1072430

MATVLRTPTFRPSPTLLTTAATSSNHSRTSRVSVASSRRRPSPLKSHRFGSIPTPRFVKLVPFAFDGDTEAPQVQDSPEVQVLDSTDGAADVEESTGDDEVSDAGEIPASPLIVLLQSYKEALANNDAVKVAELESSLKSIDDEIVGLEGKIASLSEELSIEKDRKLRIGADFDNYRKRTDRDRLSLVTNAQGEVVESLLPVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFIEILNSLGVEPVDTVGSPFDPMGRKPVGSKFNRVLAELFQTLYQLHEAIMREDSDEFEDGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQEVPQEEQVTNETSQDSKENDGNTETESA*