AlfalfaGEDB | Msa1352540

M. sativa cultivar zhongmu-4 / Msa1352540

KEGG: K21444
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009909 GO:0009911 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0097159 GO:1901363 GO:2000026 GO:2000241 GO:2000243
PFAM: PF00013.32

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1352540	XP_013450538.2	98.535	273	4	0	1	273	170	442	0.0	546

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1352540	sp\|Q9SR13\|FLK_ARATH	67.153	274	73	9	1	267	313	576	2.90e-103	315

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1352540	A0A072U4E2	98.535	273	4	0	1	273	170	442	0.0	546

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0029850	Msa1352540	-0.808495	3.012222e-50	-8.615850e-47
Msa0042550	Msa1352540	-0.825873	3.697283e-54	-8.615850e-47
Msa0055070	Msa1352540	-0.801086	1.062659e-48	-8.615850e-47
Msa0056450	Msa1352540	-0.813058	3.102405e-51	-8.615850e-47
Msa0058600	Msa1352540	-0.807459	5.002387e-50	-8.615850e-47
Msa0077450	Msa1352540	-0.819563	1.087803e-52	-8.615850e-47
Msa0090390	Msa1352540	-0.812318	4.502255e-51	-8.615850e-47
Msa0092440	Msa1352540	-0.814592	1.424690e-51	-8.615850e-47
Msa0101020	Msa1352540	-0.802148	6.436483e-49	-8.615850e-47
Msa0104700	Msa1352540	-0.808229	3.432112e-50	-8.615850e-47
Msa0119320	Msa1352540	-0.830847	2.331420e-55	-8.615850e-47
Msa1352540	Msa1359920	-0.818257	2.154633e-52	-8.615850e-47
Msa1352540	Msa1366300	-0.804418	2.181340e-49	-8.615850e-47
Msa1352540	Msa1372150	-0.822609	2.161272e-53	-8.615850e-47
Msa1352540	Msa1379850	-0.806953	6.403602e-50	-8.615850e-47
Msa1352540	Msa1385020	-0.818828	1.598521e-52	-8.615850e-47
Msa1352540	Msa1394310	-0.800366	1.490932e-48	-8.615850e-47
Msa1352540	Msa1396780	-0.803212	3.881985e-49	-8.615850e-47
Msa1352540	Msa1400070	-0.809425	1.904105e-50	-8.615850e-47
Msa1352540	Msa1401140	-0.801058	1.076924e-48	-8.615850e-47
Msa1352540	Msa1408620	0.818311	2.094657e-52	-8.615850e-47
Msa1352540	Msa1417810	0.833475	5.222036e-56	-8.615850e-47
Msa1352540	Msa1420250	-0.811493	6.809925e-51	-8.615850e-47
Msa1352540	Msa1420270	-0.803674	3.114738e-49	-8.615850e-47
Msa1352540	Msa1422840	-0.822693	2.066051e-53	-8.615850e-47
Msa1352540	Msa1424630	-0.808896	2.471925e-50	-8.615850e-47
Msa1352540	Msa1433220	-0.838500	2.771971e-57	-8.615850e-47
Msa1352540	Msa1435400	-0.809668	1.688447e-50	-8.615850e-47
Msa1352540	Msa1440940	-0.800774	1.230838e-48	-8.615850e-47
Msa1352540	Msa1443610	-0.815632	8.370872e-52	-8.615850e-47
Msa1352540	Msa1445220	-0.811332	7.381595e-51	-8.615850e-47
Msa1352540	Msa1445390	0.807336	5.313141e-50	-8.615850e-47
Msa1352540	Msa1445400	0.833905	4.075924e-56	-8.615850e-47
Msa1352540	Msa1449350	0.840000	1.131599e-57	-8.615850e-47
Msa1352540	Msa1457160	-0.815290	9.971865e-52	-8.615850e-47
Msa0613460	Msa1352540	-0.839636	1.407338e-57	-8.615850e-47
Msa0615220	Msa1352540	-0.808939	2.420558e-50	-8.615850e-47
Msa0626990	Msa1352540	-0.802340	5.878328e-49	-8.615850e-47
Msa0627350	Msa1352540	-0.800280	1.552104e-48	-8.615850e-47
Msa0641730	Msa1352540	-0.800088	1.698288e-48	-8.615850e-47
Msa0648240	Msa1352540	0.841534	4.483317e-58	-8.615850e-47
Msa0654930	Msa1352540	0.827723	1.336685e-54	-8.615850e-47
Msa0661320	Msa1352540	-0.821636	3.634507e-53	-8.615850e-47
Msa0667740	Msa1352540	-0.820706	5.953157e-53	-8.615850e-47
Msa0679290	Msa1352540	0.804199	2.423080e-49	-8.615850e-47
Msa0689760	Msa1352540	-0.812214	4.745571e-51	-8.615850e-47
Msa0689780	Msa1352540	-0.800640	1.310990e-48	-8.615850e-47
Msa0691050	Msa1352540	-0.817822	2.701437e-52	-8.615850e-47
Msa0698440	Msa1352540	-0.808235	3.421523e-50	-8.615850e-47
Msa0705190	Msa1352540	-0.802695	4.966413e-49	-8.615850e-47
Msa0715410	Msa1352540	-0.813464	2.525814e-51	-8.615850e-47
Msa0716860	Msa1352540	-0.806283	8.868825e-50	-8.615850e-47
Msa0748730	Msa1352540	-0.803195	3.914742e-49	-8.615850e-47
Msa0773310	Msa1352540	-0.835224	1.900125e-56	-8.615850e-47
Msa0780280	Msa1352540	-0.807576	4.724121e-50	-8.615850e-47
Msa0795070	Msa1352540	-0.801283	9.687212e-49	-8.615850e-47
Msa0799060	Msa1352540	-0.814042	1.884415e-51	-8.615850e-47
Msa0800770	Msa1352540	-0.805589	1.240996e-49	-8.615850e-47
Msa0809140	Msa1352540	-0.815339	9.726940e-52	-8.615850e-47
Msa0810760	Msa1352540	-0.815539	8.778553e-52	-8.615850e-47
Msa0821800	Msa1352540	-0.802031	6.803545e-49	-8.615850e-47
Msa0827470	Msa1352540	-0.803635	3.172683e-49	-8.615850e-47
Msa0829830	Msa1352540	-0.805938	1.048135e-49	-8.615850e-47
Msa0831850	Msa1352540	-0.801100	1.055750e-48	-8.615850e-47
Msa0838930	Msa1352540	-0.810330	1.216453e-50	-8.615850e-47
Msa0124550	Msa1352540	-0.801540	8.581597e-49	-8.615850e-47
Msa0133980	Msa1352540	0.844950	5.504468e-59	-8.615850e-47
Msa0137870	Msa1352540	-0.814663	1.373554e-51	-8.615850e-47
Msa0138520	Msa1352540	-0.800698	1.275552e-48	-8.615850e-47
Msa0140500	Msa1352540	0.806687	7.287670e-50	-8.615850e-47
Msa0140510	Msa1352540	0.833920	4.040588e-56	-8.615850e-47
Msa0150990	Msa1352540	-0.823000	1.753099e-53	-8.615850e-47
Msa0169820	Msa1352540	-0.816827	4.524008e-52	-8.615850e-47
Msa0170140	Msa1352540	-0.803979	2.691251e-49	-8.615850e-47
Msa0178510	Msa1352540	-0.830117	3.517401e-55	-8.615850e-47
Msa0183010	Msa1352540	0.822471	2.327688e-53	-8.615850e-47
Msa0187030	Msa1352540	-0.807973	3.890483e-50	-8.615850e-47
Msa0187830	Msa1352540	-0.834772	2.470598e-56	-8.615850e-47
Msa0190530	Msa1352540	-0.829951	3.860650e-55	-8.615850e-47
Msa0193540	Msa1352540	-0.832279	1.034777e-55	-8.615850e-47
Msa0200560	Msa1352540	-0.814039	1.887546e-51	-8.615850e-47
Msa0226180	Msa1352540	-0.803439	3.484196e-49	-8.615850e-47
Msa0230640	Msa1352540	0.811113	8.235407e-51	-8.615850e-47
Msa0236700	Msa1352540	0.815952	7.102316e-52	-8.615850e-47
Msa0238230	Msa1352540	-0.809503	1.832708e-50	-8.615850e-47
Msa1224580	Msa1352540	0.836661	8.210454e-57	-8.615850e-47
Msa1244750	Msa1352540	0.801721	7.877175e-49	-8.615850e-47
Msa1263290	Msa1352540	0.839596	1.441971e-57	-8.615850e-47
Msa1288450	Msa1352540	-0.822757	1.997253e-53	-8.615850e-47
Msa1297310	Msa1352540	-0.822155	2.756180e-53	-8.615850e-47
Msa1307550	Msa1352540	-0.805428	1.341656e-49	-8.615850e-47
Msa1319820	Msa1352540	-0.812528	4.051411e-51	-8.615850e-47
Msa1332050	Msa1352540	-0.820460	6.781085e-53	-8.615850e-47
Msa1343250	Msa1352540	-0.829373	5.338229e-55	-8.615850e-47
Msa0365490	Msa1352540	-0.800578	1.349671e-48	-8.615850e-47
Msa0377440	Msa1352540	-0.811177	7.975517e-51	-8.615850e-47
Msa0381600	Msa1352540	0.811070	8.413297e-51	-8.615850e-47
Msa0381610	Msa1352540	0.804699	1.906078e-49	-8.615850e-47
Msa0388030	Msa1352540	0.826181	3.123072e-54	-8.615850e-47
Msa0394260	Msa1352540	-0.813675	2.270370e-51	-8.615850e-47
Msa0398200	Msa1352540	-0.825079	5.699381e-54	-8.615850e-47
Msa0417650	Msa1352540	-0.811421	7.062427e-51	-8.615850e-47
Msa0420590	Msa1352540	0.829904	3.964671e-55	-8.615850e-47
Msa0420650	Msa1352540	0.830016	3.722905e-55	-8.615850e-47
Msa0422180	Msa1352540	-0.817613	3.011353e-52	-8.615850e-47
Msa0429090	Msa1352540	-0.827597	1.433101e-54	-8.615850e-47
Msa0436370	Msa1352540	-0.805245	1.465055e-49	-8.615850e-47
Msa0452810	Msa1352540	0.816597	5.095668e-52	-8.615850e-47
Msa0455740	Msa1352540	-0.837480	5.070140e-57	-8.615850e-47
Msa0469940	Msa1352540	0.800088	1.698338e-48	-8.615850e-47
Msa0475500	Msa1352540	-0.820127	8.083029e-53	-8.615850e-47
Msa1008750	Msa1352540	-0.827987	1.154592e-54	-8.615850e-47
Msa1012590	Msa1352540	0.819579	1.078485e-52	-8.615850e-47
Msa1021510	Msa1352540	-0.818680	1.727672e-52	-8.615850e-47
Msa1022820	Msa1352540	-0.803959	2.717140e-49	-8.615850e-47
Msa1026940	Msa1352540	-0.806811	6.862996e-50	-8.615850e-47
Msa1029080	Msa1352540	0.821404	4.111246e-53	-8.615850e-47
Msa1034280	Msa1352540	-0.805107	1.565745e-49	-8.615850e-47
Msa1038080	Msa1352540	-0.809590	1.754953e-50	-8.615850e-47
Msa1040340	Msa1352540	-0.813774	2.158627e-51	-8.615850e-47
Msa1050740	Msa1352540	-0.846334	2.318562e-59	-8.615850e-47
Msa1054150	Msa1352540	0.803036	4.222108e-49	-8.615850e-47
Msa1063420	Msa1352540	-0.806811	6.861588e-50	-8.615850e-47
Msa1096060	Msa1352540	-0.815355	9.647008e-52	-8.615850e-47
Msa1098250	Msa1352540	-0.823996	1.024919e-53	-8.615850e-47
Msa1098270	Msa1352540	-0.839055	1.992328e-57	-8.615850e-47
Msa1105500	Msa1352540	-0.809086	2.250743e-50	-8.615850e-47
Msa0244140	Msa1352540	-0.804405	2.194681e-49	-8.615850e-47
Msa0244190	Msa1352540	-0.803070	4.153777e-49	-8.615850e-47
Msa0266240	Msa1352540	-0.809917	1.493034e-50	-8.615850e-47
Msa0269520	Msa1352540	-0.807209	5.653364e-50	-8.615850e-47
Msa0274630	Msa1352540	-0.816903	4.350749e-52	-8.615850e-47
Msa0277420	Msa1352540	-0.821458	3.994580e-53	-8.615850e-47
Msa0278900	Msa1352540	-0.818672	1.734507e-52	-8.615850e-47
Msa0280570	Msa1352540	-0.802609	5.172472e-49	-8.615850e-47
Msa0296980	Msa1352540	0.820661	6.096637e-53	-8.615850e-47
Msa0301070	Msa1352540	-0.801289	9.658502e-49	-8.615850e-47
Msa0314060	Msa1352540	-0.827326	1.664281e-54	-8.615850e-47
Msa0322680	Msa1352540	-0.806777	6.977495e-50	-8.615850e-47
Msa0349700	Msa1352540	-0.811557	6.597304e-51	-8.615850e-47
Msa1111870	Msa1352540	-0.802935	4.430034e-49	-8.615850e-47
Msa1115280	Msa1352540	-0.807468	4.980271e-50	-8.615850e-47
Msa1118760	Msa1352540	-0.826595	2.488150e-54	-8.615850e-47
Msa1121490	Msa1352540	-0.803563	3.284347e-49	-8.615850e-47
Msa1133570	Msa1352540	-0.809268	2.058075e-50	-8.615850e-47
Msa1143020	Msa1352540	-0.818476	1.921922e-52	-8.615850e-47
Msa1156170	Msa1352540	0.818391	2.008432e-52	-8.615850e-47
Msa1162550	Msa1352540	0.805007	1.643117e-49	-8.615850e-47
Msa1164020	Msa1352540	-0.803925	2.761919e-49	-8.615850e-47
Msa1172130	Msa1352540	0.802772	4.788209e-49	-8.615850e-47
Msa1176270	Msa1352540	-0.807560	4.761878e-50	-8.615850e-47
Msa1177780	Msa1352540	-0.822442	2.364042e-53	-8.615850e-47
Msa1178450	Msa1352540	0.803973	2.699376e-49	-8.615850e-47
Msa1205390	Msa1352540	-0.801260	9.791269e-49	-8.615850e-47
Msa1215920	Msa1352540	-0.802036	6.787340e-49	-8.615850e-47
Msa0485490	Msa1352540	-0.807592	4.689349e-50	-8.615850e-47
Msa0517090	Msa1352540	-0.819566	1.086100e-52	-8.615850e-47
Msa0521620	Msa1352540	-0.803858	2.851548e-49	-8.615850e-47
Msa0522640	Msa1352540	-0.817288	3.563714e-52	-8.615850e-47
Msa0526100	Msa1352540	0.803523	3.346652e-49	-8.615850e-47
Msa0532930	Msa1352540	-0.807604	4.661496e-50	-8.615850e-47
Msa0554380	Msa1352540	0.814634	1.393930e-51	-8.615850e-47
Msa0557050	Msa1352540	-0.820841	5.542950e-53	-8.615850e-47
Msa0559500	Msa1352540	-0.805995	1.019827e-49	-8.615850e-47
Msa0572420	Msa1352540	-0.802454	5.567193e-49	-8.615850e-47
Msa0572480	Msa1352540	-0.823187	1.585003e-53	-8.615850e-47
Msa0573040	Msa1352540	-0.815041	1.132564e-51	-8.615850e-47
Msa0574760	Msa1352540	0.805162	1.524956e-49	-8.615850e-47
Msa0587190	Msa1352540	-0.807733	4.376316e-50	-8.615850e-47
Msa0595600	Msa1352540	-0.811142	8.115435e-51	-8.615850e-47
Msa0844110	Msa1352540	-0.801392	9.199470e-49	-8.615850e-47
Msa0849810	Msa1352540	-0.803850	2.863599e-49	-8.615850e-47
Msa0868160	Msa1352540	-0.819842	9.390623e-53	-8.615850e-47
Msa0892570	Msa1352540	-0.826013	3.423666e-54	-8.615850e-47
Msa0930910	Msa1352540	0.807638	4.583718e-50	-8.615850e-47
Msa0936390	Msa1352540	-0.802622	5.141634e-49	-8.615850e-47
Msa0939110	Msa1352540	-0.822087	2.857556e-53	-8.615850e-47
Msa0945100	Msa1352540	-0.804010	2.652267e-49	-8.615850e-47
Msa0945120	Msa1352540	-0.813065	3.090602e-51	-8.615850e-47
Msa0960740	Msa1352540	-0.813161	2.944710e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1352540	MtrunA17_Chr7g0274301	98.535	273	4	0	1	273	238	510	0.0	545
Msa1352540	MtrunA17_Chr1g0184511	58.214	280	105	7	1	272	292	567	2.40e-79	250
Msa1352540	MtrunA17_Chr4g0071791	37.220	223	117	5	1	219	172	375	8.83e-37	135
Msa1352540	MtrunA17_Chr2g0298721	36.752	234	129	6	1	231	198	415	1.94e-33	126

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1352540	AT3G04610.3	67.153	274	73	9	1	267	289	552	1.36e-104	315
Msa1352540	AT3G04610.4	67.153	274	73	9	1	267	289	552	1.36e-104	315
Msa1352540	AT3G04610.2	67.153	274	73	9	1	267	313	576	2.95e-104	315
Msa1352540	AT3G04610.1	67.153	274	73	9	1	267	313	576	2.95e-104	315
Msa1352540	AT4G26000.1	36.475	244	132	6	1	239	202	427	2.68e-40	146

Find 117 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTAGCCTATGGTGCAGTTTA+TGG	0.255984	tig0012609:-17036	Msa1352540:CDS
TCGTACGCTGATGCTGTTAT+TGG	0.256618	tig0012609:-18136	Msa1352540:CDS
GCAGTTTATGGTGCAAATTA+TGG	0.271012	tig0012609:-17024	Msa1352540:CDS
TGGTGGGGTGGTGGTGGCAC+TGG	0.284770	tig0012609:+18788	Msa1352540:intergenic
GATATAGCTTATATTTGTTC+CGG	0.327385	tig0012609:+18108	Msa1352540:intergenic
GCTGGTGGAGGTCCTGGATT+TGG	0.327478	tig0012609:-18731	Msa1352540:CDS
CAGTTTATGGTGCAAATTAT+GGG	0.346952	tig0012609:-17023	Msa1352540:CDS
AACTCCTCTTGTTTCTTGTA+TGG	0.349928	tig0012609:+18060	Msa1352540:intergenic
TGTTTCTGTTGGCAGTCATT+TGG	0.351005	tig0012609:-16845	Msa1352540:three_prime_UTR
CCCCATGATTGGTGGGGTGG+TGG	0.363121	tig0012609:+18779	Msa1352540:intergenic
GGCACTGGCATGTGCTCCAC+AGG	0.369095	tig0012609:+18803	Msa1352540:intergenic
CCAAATGCTGGTGGAGGTCC+TGG	0.372713	tig0012609:-18737	Msa1352540:CDS
CCAATCATGGGGTCCACCTC+AGG	0.379209	tig0012609:-18768	Msa1352540:CDS
ATGTTTCCAACATTCAATAA+TGG	0.379356	tig0012609:+16969	Msa1352540:intergenic
CATGATTGGTGGGGTGGTGG+TGG	0.386854	tig0012609:+18782	Msa1352540:intergenic
GACAGGGTGGTTGAAGTAGT+AGG	0.398062	tig0012609:-19027	Msa1352540:CDS
CACTGCCTTGTGCACTCCAA+TGG	0.404296	tig0012609:+18999	Msa1352540:intergenic
CACCACCACCCCACCAATCA+TGG	0.417160	tig0012609:-18781	Msa1352540:CDS
CCACCTGTTTGTTGCTGCGC+CGG	0.419210	tig0012609:+17141	Msa1352540:intergenic
GCACCGGCGCAGCAACAAAC+AGG	0.420300	tig0012609:-17144	Msa1352540:CDS
GAATTGTATCCTTGGTCTGC+AGG	0.425427	tig0012609:+17114	Msa1352540:intergenic
CCAGGACCTCCACCAGCATT+TGG	0.425866	tig0012609:+18737	Msa1352540:intergenic
TAATTATCAACTTGCCTTGG+AGG	0.437730	tig0012609:+18686	Msa1352540:intergenic
TAGTTCTACTGCCTCATCAT+TGG	0.438346	tig0012609:+16998	Msa1352540:intergenic
GGGGCTGTTTGTCCAATGGA+GGG	0.440587	tig0012609:+18642	Msa1352540:intergenic
CAAGAAACAAGAGGAGTTCC+TGG	0.449581	tig0012609:-18055	Msa1352540:CDS
CAACCACCCTGTCATCTTGA+AGG	0.450885	tig0012609:+19037	Msa1352540:intergenic
AAGCTTCCATTATTGAATGT+TGG	0.451784	tig0012609:-16975	Msa1352540:three_prime_UTR
CTATTCGACATTGTGCTACA+TGG	0.452832	tig0012609:-16920	Msa1352540:three_prime_UTR
GAGGTGGACCCCATGATTGG+TGG	0.454647	tig0012609:+18771	Msa1352540:intergenic
ACAGGGTGGTTGAAGTAGTA+GGG	0.462789	tig0012609:-19026	Msa1352540:CDS
ACTGCCTTGTGCACTCCAAT+GGG	0.463713	tig0012609:+19000	Msa1352540:intergenic
AGGTGGACCCCATGATTGGT+GGG	0.466069	tig0012609:+18772	Msa1352540:intergenic
GATCTTTCTCCAGATGCAAA+TGG	0.469181	tig0012609:-18837	Msa1352540:intron
ATGCTAGTTAACTAACTACT+AGG	0.472817	tig0012609:-16717	Msa1352540:three_prime_UTR
GGACCCCATGATTGGTGGGG+TGG	0.475178	tig0012609:+18776	Msa1352540:intergenic
TATGGAAGAGATGCTTCAAT+AGG	0.476740	tig0012609:-18602	Msa1352540:CDS
GGCTGTTTGTCCAATGGAGG+GGG	0.485028	tig0012609:+18644	Msa1352540:intergenic
ACAGCATCAGCGTACGATAG+AGG	0.489668	tig0012609:+18142	Msa1352540:intergenic
GGCTACAGCATGTCCTGGAT+TGG	0.489729	tig0012609:+17053	Msa1352540:intergenic
CCAGGACATGCTGTAGCCTA+TGG	0.493986	tig0012609:-17048	Msa1352540:CDS
CATTGGAGTGCACAAGGCAG+TGG	0.499275	tig0012609:-18998	Msa1352540:CDS
CAGGGTAGGAATTGTATCCT+TGG	0.499993	tig0012609:+17106	Msa1352540:intergenic
AACAGCACAGCAATTGATAC+AGG	0.502245	tig0012609:-17990	Msa1352540:intron
ACCACCACCCCACCAATCAT+GGG	0.502652	tig0012609:-18780	Msa1352540:CDS
CTTGGAGGTGGCATGAATTG+AGG	0.503745	tig0012609:+18701	Msa1352540:intergenic
CCTGAGGTGGACCCCATGAT+TGG	0.504891	tig0012609:+18768	Msa1352540:intergenic
CATGCGATTTATGAAAAGCT+AGG	0.505999	tig0012609:+16737	Msa1352540:intergenic
GCGTCACCACCTTCCAATCC+AGG	0.508103	tig0012609:-17066	Msa1352540:CDS
CATCATGGTATATCCGCCTA+TGG	0.508306	tig0012609:-18620	Msa1352540:CDS
CAGGGTCTCCCACCAAATGC+TGG	0.510314	tig0012609:-18749	Msa1352540:CDS
CTCCCACCAAATGCTGGTGG+AGG	0.511292	tig0012609:-18743	Msa1352540:CDS
GGGCTGTTTGTCCAATGGAG+GGG	0.511453	tig0012609:+18643	Msa1352540:intergenic
CAAGTTAATAATACATTACA+AGG	0.515691	tig0012609:+16798	Msa1352540:intergenic
CACCAGTGTTCTGTTTCTGT+TGG	0.515972	tig0012609:-16856	Msa1352540:three_prime_UTR
TGCTAGTTAACTAACTACTA+GGG	0.516781	tig0012609:-16716	Msa1352540:three_prime_UTR
TATGGCGGAAGCTGCAGCAC+CGG	0.517885	tig0012609:-17160	Msa1352540:CDS
TACTCAGTCTGCACCTTCCA+TGG	0.518367	tig0012609:-18561	Msa1352540:CDS
TTATCAACTTGCCTTGGAGG+TGG	0.522949	tig0012609:+18689	Msa1352540:intergenic
CCATAGGCTACAGCATGTCC+TGG	0.523583	tig0012609:+17048	Msa1352540:intergenic
TGGGGCTGTTTGTCCAATGG+AGG	0.525515	tig0012609:+18641	Msa1352540:intergenic
TAGTAATTATCAACTTGCCT+TGG	0.526071	tig0012609:+18683	Msa1352540:intergenic
ATTTCAACTGTCATCTCCCC+AGG	0.529708	tig0012609:+18037	Msa1352540:intergenic
AAATTGAGCTACAAGCTCAT+TGG	0.529728	tig0012609:+16687	Msa1352540:intergenic
CTGTTGGCAGTCATTTGGAA+AGG	0.531678	tig0012609:-16840	Msa1352540:three_prime_UTR
AGATGACAGTTGAAATCAGC+GGG	0.541840	tig0012609:-18030	Msa1352540:CDS
CATAGGCGGATATACCATGA+TGG	0.542292	tig0012609:+18621	Msa1352540:intergenic
CCGGCGCAGCAACAAACAGG+TGG	0.553534	tig0012609:-17141	Msa1352540:CDS
GCATAGACAGAACTATGAGC+AGG	0.562952	tig0012609:+17087	Msa1352540:intergenic
CTCAATTCATGCCACCTCCA+AGG	0.565069	tig0012609:-18700	Msa1352540:CDS
TGTTTCTTGTATGGTAACAG+TGG	0.565082	tig0012609:+18069	Msa1352540:intergenic
GAAAAGTACCTGTGTGACCA+TGG	0.567170	tig0012609:+18544	Msa1352540:intergenic
GGACCTCCACCAGCATTTGG+TGG	0.567350	tig0012609:+18740	Msa1352540:intergenic
TGAGGAGCAAGTCCAAATCC+AGG	0.567540	tig0012609:+18719	Msa1352540:intergenic
ATAGGCGGATATACCATGAT+GGG	0.572279	tig0012609:+18622	Msa1352540:intergenic
GGAAGGTGCAGACTGAGTAT+TGG	0.573422	tig0012609:+18565	Msa1352540:intergenic
GCACTGGCATGTGCTCCACA+GGG	0.573640	tig0012609:+18804	Msa1352540:intergenic
TATTGAAGCATCTCTTCCAT+AGG	0.574272	tig0012609:+18604	Msa1352540:intergenic
ACAGCATGTCCTGGATTGGA+AGG	0.577875	tig0012609:+17057	Msa1352540:intergenic
AAGAAACAAGAGGAGTTCCT+GGG	0.578584	tig0012609:-18054	Msa1352540:CDS
GGATCCCATTGGAGTGCACA+AGG	0.586468	tig0012609:-19004	Msa1352540:CDS
TTGGACAAACAGCCCCATCA+TGG	0.587088	tig0012609:-18635	Msa1352540:CDS
GATGCTGTTATTGGAACAGC+CGG	0.587215	tig0012609:-18127	Msa1352540:CDS
AACCACCCTGTCATCTTGAA+GGG	0.588607	tig0012609:+19038	Msa1352540:intergenic
TGCACCATAAACTGCACCAT+AGG	0.596471	tig0012609:+17032	Msa1352540:intergenic
TTGTATCCTTGGTCTGCAGG+AGG	0.600150	tig0012609:+17117	Msa1352540:intergenic
GGTGGACCCCATGATTGGTG+GGG	0.600476	tig0012609:+18773	Msa1352540:intergenic
AGCTATATCAGAAGAGCAAG+TGG	0.600575	tig0012609:-18094	Msa1352540:CDS
TGATGGGGCTGTTTGTCCAA+TGG	0.602005	tig0012609:+18638	Msa1352540:intergenic
GACCTCCACCAGCATTTGGT+GGG	0.602365	tig0012609:+18741	Msa1352540:intergenic
GACAGAACTATGAGCAGGGT+AGG	0.604594	tig0012609:+17092	Msa1352540:intergenic
CAATCATGGGGTCCACCTCA+GGG	0.610026	tig0012609:-18767	Msa1352540:CDS
GCTATATCAGAAGAGCAAGT+GGG	0.610415	tig0012609:-18093	Msa1352540:CDS
GGTCTCCCACCAAATGCTGG+TGG	0.624009	tig0012609:-18746	Msa1352540:CDS
TGCACCTTCCATGGTCACAC+AGG	0.626823	tig0012609:-18552	Msa1352540:intron
CAGGGTGGTTGAAGTAGTAG+GGG	0.627870	tig0012609:-19025	Msa1352540:CDS
TGAAGCATCTCTTCCATAGG+CGG	0.628282	tig0012609:+18607	Msa1352540:intergenic
TGCCCTTCAAGATGACAGGG+TGG	0.630655	tig0012609:-19040	Msa1352540:CDS
GAAGTAGTAGGGGATCCCAT+TGG	0.631279	tig0012609:-19015	Msa1352540:CDS
AGTACCTGTGTGACCATGGA+AGG	0.631574	tig0012609:+18548	Msa1352540:intergenic
GTTACCATACAAGAAACAAG+AGG	0.636417	tig0012609:-18064	Msa1352540:CDS
CTGGCATGTGCTCCACAGGG+TGG	0.637657	tig0012609:+18807	Msa1352540:intergenic
CTATATCAGAAGAGCAAGTG+GGG	0.641360	tig0012609:-18092	Msa1352540:CDS
CGGCGCAGCAACAAACAGGT+GGG	0.647966	tig0012609:-17140	Msa1352540:CDS
CCACCACCCCACCAATCATG+GGG	0.649451	tig0012609:-18779	Msa1352540:CDS
AATTATGGGTACCAATGATG+AGG	0.652066	tig0012609:-17009	Msa1352540:exon
TTTGGTGGGAGACCCTGAGG+TGG	0.656048	tig0012609:+18755	Msa1352540:intergenic
GCTAGTTAACTAACTACTAG+GGG	0.657408	tig0012609:-16715	Msa1352540:three_prime_UTR
GGTGGGCCTCCTGCAGACCA+AGG	0.658048	tig0012609:-17123	Msa1352540:CDS
GCATTTGGTGGGAGACCCTG+AGG	0.663331	tig0012609:+18752	Msa1352540:intergenic
CATAGACAGAACTATGAGCA+GGG	0.665116	tig0012609:+17088	Msa1352540:intergenic
TGCCAACAGAAACAGAACAC+TGG	0.675506	tig0012609:+16854	Msa1352540:intergenic
TAGGCGGATATACCATGATG+GGG	0.688165	tig0012609:+18623	Msa1352540:intergenic
GCATGTCCTGGATTGGAAGG+TGG	0.712815	tig0012609:+17060	Msa1352540:intergenic
AGAAACAAGAGGAGTTCCTG+GGG	0.720239	tig0012609:-18053	Msa1352540:CDS
AATGGCTAATAACCACCCTG+TGG	0.739150	tig0012609:-18819	Msa1352540:CDS
GAGATGACAGTTGAAATCAG+CGG	0.760601	tig0012609:-18031	Msa1352540:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACTAAAAATTTCTTAAGGT+GGG	+	tig0012609:16800-16819	Msa1352540:intergenic	20.0%
!!	GATCAACTAAAAATTTCTTA+AGG	+	tig0012609:16804-16823	Msa1352540:intergenic	20.0%
!!	CTTACATTCATTTCAAAAAT+TGG	+	tig0012609:16838-16857	Msa1352540:intergenic	20.0%
!!	TTATTAACCATTGTTATACT+TGG	-	tig0012609:17985-18004	Msa1352540:intron	20.0%
!!!	ACTGTTTTGTTTTTTAATAG+TGG	+	tig0012609:18039-18058	Msa1352540:intergenic	20.0%
!!	AAAAATATTGAATCGTTTAC+TGG	-	tig0012609:18177-18196	Msa1352540:intron	20.0%
!!	AAAATATTGAATCGTTTACT+GGG	-	tig0012609:18178-18197	Msa1352540:intron	20.0%
!!!	TATTTTTTCAATAAGTTGAC+TGG	-	tig0012609:18316-18335	Msa1352540:intron	20.0%
!!!	GTAAATTCATAGCTTTTATA+TGG	+	tig0012609:18464-18483	Msa1352540:intergenic	20.0%
!!	CAAGTTAATAATACATTACA+AGG	+	tig0012609:18965-18984	Msa1352540:intergenic	20.0%
!!	AACTAAAAATTTCTTAAGGT+GGG	+	tig0012609:16800-16819	Msa1352540:intergenic	20.0%
!!	GATCAACTAAAAATTTCTTA+AGG	+	tig0012609:16804-16823	Msa1352540:intergenic	20.0%
!!	CTTACATTCATTTCAAAAAT+TGG	+	tig0012609:16838-16857	Msa1352540:intergenic	20.0%
!!	TTATTAACCATTGTTATACT+TGG	-	tig0012609:17985-18004	Msa1352540:intron	20.0%
!!!	ACTGTTTTGTTTTTTAATAG+TGG	+	tig0012609:18039-18058	Msa1352540:intergenic	20.0%
!!	AAAAATATTGAATCGTTTAC+TGG	-	tig0012609:18177-18196	Msa1352540:intron	20.0%
!!	AAAATATTGAATCGTTTACT+GGG	-	tig0012609:18178-18197	Msa1352540:intron	20.0%
!!!	TATTTTTTCAATAAGTTGAC+TGG	-	tig0012609:18316-18335	Msa1352540:intron	20.0%
!!!	GTAAATTCATAGCTTTTATA+TGG	+	tig0012609:18464-18483	Msa1352540:intergenic	20.0%
!!	CAAGTTAATAATACATTACA+AGG	+	tig0012609:18965-18984	Msa1352540:intergenic	20.0%
!	CAACTAAAAATTTCTTAAGG+TGG	+	tig0012609:16801-16820	Msa1352540:intergenic	25.0%
!!!	TTATGTAGTTTGCATTTTTC+TGG	-	tig0012609:17317-17336	Msa1352540:intron	25.0%
!!	TTTAGATTTAAGATAGCAGA+GGG	-	tig0012609:17501-17520	Msa1352540:intron	25.0%
!	GATATAGCTTATATTTGTTC+CGG	+	tig0012609:17655-17674	Msa1352540:intergenic	25.0%
!	TTAATAACCAACTGTTAATG+AGG	+	tig0012609:17972-17991	Msa1352540:intergenic	25.0%
!	ACTTATTGAAAAAATACTCG+TGG	+	tig0012609:18312-18331	Msa1352540:intergenic	25.0%
!	ATGTTTCCAACATTCAATAA+TGG	+	tig0012609:18794-18813	Msa1352540:intergenic	25.0%
!	CAACTAAAAATTTCTTAAGG+TGG	+	tig0012609:16801-16820	Msa1352540:intergenic	25.0%
!!!	TTATGTAGTTTGCATTTTTC+TGG	-	tig0012609:17317-17336	Msa1352540:intron	25.0%
!!	TTTAGATTTAAGATAGCAGA+GGG	-	tig0012609:17501-17520	Msa1352540:intron	25.0%
!	GATATAGCTTATATTTGTTC+CGG	+	tig0012609:17655-17674	Msa1352540:intergenic	25.0%
!	TTAATAACCAACTGTTAATG+AGG	+	tig0012609:17972-17991	Msa1352540:intergenic	25.0%
!	ACTTATTGAAAAAATACTCG+TGG	+	tig0012609:18312-18331	Msa1352540:intergenic	25.0%
!	ATGTTTCCAACATTCAATAA+TGG	+	tig0012609:18794-18813	Msa1352540:intergenic	25.0%
	AATCTATCTTATGCTTACCA+AGG	-	tig0012609:16886-16905	Msa1352540:three_prime_UTR	30.0%
	ATCAAATTAGTTGCATTCCT+TGG	+	tig0012609:16906-16925	Msa1352540:intergenic	30.0%
	TAGTAATTATCAACTTGCCT+TGG	+	tig0012609:17080-17099	Msa1352540:intergenic	30.0%
!	GTTTTCTAATAATCCCCAAA+AGG	-	tig0012609:17253-17272	Msa1352540:intron	30.0%
	CTTAAATCTAAACAGCAAAG+TGG	+	tig0012609:17493-17512	Msa1352540:intergenic	30.0%
!	GTTTAGATTTAAGATAGCAG+AGG	-	tig0012609:17500-17519	Msa1352540:intron	30.0%
	GGACAACACTAATATTAGAA+CGG	+	tig0012609:17828-17847	Msa1352540:intergenic	30.0%
	TCTAATATTAGTGTTGTCCT+AGG	-	tig0012609:17829-17848	Msa1352540:intron	30.0%
!	AACTTTTCCTCATTAACAGT+TGG	-	tig0012609:17962-17981	Msa1352540:intron	30.0%
	TTAACCATTGTTATACTTGG+AGG	-	tig0012609:17988-18007	Msa1352540:intron	30.0%
!	TAGCGCAAAATGAATCTTTT+AGG	+	tig0012609:18206-18225	Msa1352540:intergenic	30.0%
	ATTGAAAAAATACTCGTGGA+AGG	+	tig0012609:18308-18327	Msa1352540:intergenic	30.0%
	TCCTTGCATCAAATAAATGA+CGG	+	tig0012609:18378-18397	Msa1352540:intergenic	30.0%
!!	CAAGGCAAATTGATAATGTT+AGG	+	tig0012609:18540-18559	Msa1352540:intergenic	30.0%
	GATTATATTGCTTGAGTACA+AGG	+	tig0012609:18558-18577	Msa1352540:intergenic	30.0%
	CAGTTTATGGTGCAAATTAT+GGG	-	tig0012609:18737-18756	Msa1352540:CDS	30.0%
	AAGCTTCCATTATTGAATGT+TGG	-	tig0012609:18785-18804	Msa1352540:CDS	30.0%
!	AAGGTCAAACAAACTTTTGA+TGG	-	tig0012609:18939-18958	Msa1352540:CDS	30.0%
	ATGCTAGTTAACTAACTACT+AGG	-	tig0012609:19043-19062	Msa1352540:CDS	30.0%
	TGCTAGTTAACTAACTACTA+GGG	-	tig0012609:19044-19063	Msa1352540:CDS	30.0%
	AATCTATCTTATGCTTACCA+AGG	-	tig0012609:16886-16905	Msa1352540:three_prime_UTR	30.0%
	ATCAAATTAGTTGCATTCCT+TGG	+	tig0012609:16906-16925	Msa1352540:intergenic	30.0%
	TAGTAATTATCAACTTGCCT+TGG	+	tig0012609:17080-17099	Msa1352540:intergenic	30.0%
!	GTTTTCTAATAATCCCCAAA+AGG	-	tig0012609:17253-17272	Msa1352540:intron	30.0%
	CTTAAATCTAAACAGCAAAG+TGG	+	tig0012609:17493-17512	Msa1352540:intergenic	30.0%
!	GTTTAGATTTAAGATAGCAG+AGG	-	tig0012609:17500-17519	Msa1352540:intron	30.0%
	GGACAACACTAATATTAGAA+CGG	+	tig0012609:17828-17847	Msa1352540:intergenic	30.0%
	TCTAATATTAGTGTTGTCCT+AGG	-	tig0012609:17829-17848	Msa1352540:intron	30.0%
!	AACTTTTCCTCATTAACAGT+TGG	-	tig0012609:17962-17981	Msa1352540:intron	30.0%
	TTAACCATTGTTATACTTGG+AGG	-	tig0012609:17988-18007	Msa1352540:intron	30.0%
!	TAGCGCAAAATGAATCTTTT+AGG	+	tig0012609:18206-18225	Msa1352540:intergenic	30.0%
	ATTGAAAAAATACTCGTGGA+AGG	+	tig0012609:18308-18327	Msa1352540:intergenic	30.0%
	TCCTTGCATCAAATAAATGA+CGG	+	tig0012609:18378-18397	Msa1352540:intergenic	30.0%
!!	CAAGGCAAATTGATAATGTT+AGG	+	tig0012609:18540-18559	Msa1352540:intergenic	30.0%
	GATTATATTGCTTGAGTACA+AGG	+	tig0012609:18558-18577	Msa1352540:intergenic	30.0%
	CAGTTTATGGTGCAAATTAT+GGG	-	tig0012609:18737-18756	Msa1352540:CDS	30.0%
	AAGCTTCCATTATTGAATGT+TGG	-	tig0012609:18785-18804	Msa1352540:CDS	30.0%
!	AAGGTCAAACAAACTTTTGA+TGG	-	tig0012609:18939-18958	Msa1352540:CDS	30.0%
	ATGCTAGTTAACTAACTACT+AGG	-	tig0012609:19043-19062	Msa1352540:CDS	30.0%
	TGCTAGTTAACTAACTACTA+GGG	-	tig0012609:19044-19063	Msa1352540:CDS	30.0%
	TAATTATCAACTTGCCTTGG+AGG	+	tig0012609:17077-17096	Msa1352540:intergenic	35.0%
!	TATTGAAGCATCTCTTCCAT+AGG	+	tig0012609:17159-17178	Msa1352540:intergenic	35.0%
	TATGGAAGAGATGCTTCAAT+AGG	-	tig0012609:17158-17177	Msa1352540:CDS	35.0%
!	TCACCATACTACTTCCTTTT+GGG	+	tig0012609:17270-17289	Msa1352540:intergenic	35.0%
!	ATCACCATACTACTTCCTTT+TGG	+	tig0012609:17271-17290	Msa1352540:intergenic	35.0%
	AAAGGAAGTAGTATGGTGAT+TGG	-	tig0012609:17271-17290	Msa1352540:intron	35.0%
	AAGGAAGTAGTATGGTGATT+GGG	-	tig0012609:17272-17291	Msa1352540:intron	35.0%
	TGGTGATTGGGATGATATAT+TGG	-	tig0012609:17284-17303	Msa1352540:intron	35.0%
	TGTTTCTTGTATGGTAACAG+TGG	+	tig0012609:17694-17713	Msa1352540:intergenic	35.0%
	GTTACCATACAAGAAACAAG+AGG	-	tig0012609:17696-17715	Msa1352540:intron	35.0%
!	AACTCCTCTTGTTTCTTGTA+TGG	+	tig0012609:17703-17722	Msa1352540:intergenic	35.0%
	AACACTAATATTAGAACGGC+TGG	+	tig0012609:17824-17843	Msa1352540:intergenic	35.0%
	AAAAGTTTGCCAATTAGGGT+GGG	+	tig0012609:17949-17968	Msa1352540:intergenic	35.0%
	GAGGAAAAGTTTGCCAATTA+GGG	+	tig0012609:17953-17972	Msa1352540:intergenic	35.0%
	TGAGGAAAAGTTTGCCAATT+AGG	+	tig0012609:17954-17973	Msa1352540:intergenic	35.0%
	TCTACCTCCAAGTATAACAA+TGG	+	tig0012609:17995-18014	Msa1352540:intergenic	35.0%
	GTTATACTTGGAGGTAGAAT+TGG	-	tig0012609:17997-18016	Msa1352540:CDS	35.0%
	ACATTACAGTTCATAGCATG+CGG	-	tig0012609:18107-18126	Msa1352540:CDS	35.0%
	CTTGCATCAAATAAATGACG+GGG	+	tig0012609:18376-18395	Msa1352540:intergenic	35.0%
	CCTTGCATCAAATAAATGAC+GGG	+	tig0012609:18377-18396	Msa1352540:intergenic	35.0%
	TAACATCCAAGACATGCATT+CGG	+	tig0012609:18506-18525	Msa1352540:intergenic	35.0%
	GCAATATAATCCTGAATCTG+TGG	-	tig0012609:18567-18586	Msa1352540:CDS	35.0%
!	ATCTGTGGTGCAGAATTTTA+TGG	-	tig0012609:18582-18601	Msa1352540:CDS	35.0%
	GCAGTTTATGGTGCAAATTA+TGG	-	tig0012609:18736-18755	Msa1352540:CDS	35.0%
	AATTATGGGTACCAATGATG+AGG	-	tig0012609:18751-18770	Msa1352540:CDS	35.0%
	CATGCGATTTATGAAAAGCT+AGG	+	tig0012609:19026-19045	Msa1352540:intergenic	35.0%
	GCTAGTTAACTAACTACTAG+GGG	-	tig0012609:19045-19064	Msa1352540:CDS	35.0%
	TAATTATCAACTTGCCTTGG+AGG	+	tig0012609:17077-17096	Msa1352540:intergenic	35.0%
!	TATTGAAGCATCTCTTCCAT+AGG	+	tig0012609:17159-17178	Msa1352540:intergenic	35.0%
	TATGGAAGAGATGCTTCAAT+AGG	-	tig0012609:17158-17177	Msa1352540:CDS	35.0%
!	TCACCATACTACTTCCTTTT+GGG	+	tig0012609:17270-17289	Msa1352540:intergenic	35.0%
!	ATCACCATACTACTTCCTTT+TGG	+	tig0012609:17271-17290	Msa1352540:intergenic	35.0%
	AAAGGAAGTAGTATGGTGAT+TGG	-	tig0012609:17271-17290	Msa1352540:intron	35.0%
	AAGGAAGTAGTATGGTGATT+GGG	-	tig0012609:17272-17291	Msa1352540:intron	35.0%
	TGGTGATTGGGATGATATAT+TGG	-	tig0012609:17284-17303	Msa1352540:intron	35.0%
	TGTTTCTTGTATGGTAACAG+TGG	+	tig0012609:17694-17713	Msa1352540:intergenic	35.0%
	GTTACCATACAAGAAACAAG+AGG	-	tig0012609:17696-17715	Msa1352540:intron	35.0%
!	AACTCCTCTTGTTTCTTGTA+TGG	+	tig0012609:17703-17722	Msa1352540:intergenic	35.0%
	AACACTAATATTAGAACGGC+TGG	+	tig0012609:17824-17843	Msa1352540:intergenic	35.0%
	AAAAGTTTGCCAATTAGGGT+GGG	+	tig0012609:17949-17968	Msa1352540:intergenic	35.0%
	GAGGAAAAGTTTGCCAATTA+GGG	+	tig0012609:17953-17972	Msa1352540:intergenic	35.0%
	TGAGGAAAAGTTTGCCAATT+AGG	+	tig0012609:17954-17973	Msa1352540:intergenic	35.0%
	TCTACCTCCAAGTATAACAA+TGG	+	tig0012609:17995-18014	Msa1352540:intergenic	35.0%
	GTTATACTTGGAGGTAGAAT+TGG	-	tig0012609:17997-18016	Msa1352540:CDS	35.0%
	ACATTACAGTTCATAGCATG+CGG	-	tig0012609:18107-18126	Msa1352540:CDS	35.0%
	CTTGCATCAAATAAATGACG+GGG	+	tig0012609:18376-18395	Msa1352540:intergenic	35.0%
	CCTTGCATCAAATAAATGAC+GGG	+	tig0012609:18377-18396	Msa1352540:intergenic	35.0%
	TAACATCCAAGACATGCATT+CGG	+	tig0012609:18506-18525	Msa1352540:intergenic	35.0%
	GCAATATAATCCTGAATCTG+TGG	-	tig0012609:18567-18586	Msa1352540:CDS	35.0%
!	ATCTGTGGTGCAGAATTTTA+TGG	-	tig0012609:18582-18601	Msa1352540:CDS	35.0%
	GCAGTTTATGGTGCAAATTA+TGG	-	tig0012609:18736-18755	Msa1352540:CDS	35.0%
	AATTATGGGTACCAATGATG+AGG	-	tig0012609:18751-18770	Msa1352540:CDS	35.0%
	CATGCGATTTATGAAAAGCT+AGG	+	tig0012609:19026-19045	Msa1352540:intergenic	35.0%
	GCTAGTTAACTAACTACTAG+GGG	-	tig0012609:19045-19064	Msa1352540:CDS	35.0%
	TCATCTTGAAGGGCAAAAAC+AGG	+	tig0012609:16715-16734	Msa0071980:intergenic	40.0%
!	TTTTTGCCCTTCAAGATGAC+AGG	-	tig0012609:16716-16735	Msa1352540:three_prime_UTR	40.0%
!	TTTTGCCCTTCAAGATGACA+GGG	-	tig0012609:16717-16736	Msa1352540:three_prime_UTR	40.0%
	GATCTTTCTCCAGATGCAAA+TGG	-	tig0012609:16923-16942	Msa1352540:three_prime_UTR	40.0%
	GGTTATTAGCCATTTGCATC+TGG	+	tig0012609:16935-16954	Msa1352540:intergenic	40.0%
	ATAGGCGGATATACCATGAT+GGG	+	tig0012609:17141-17160	Msa1352540:intergenic	40.0%
	ATCCCCAAAAGGAAGTAGTA+TGG	-	tig0012609:17264-17283	Msa1352540:intron	40.0%
!	CACCATACTACTTCCTTTTG+GGG	+	tig0012609:17269-17288	Msa1352540:intergenic	40.0%
	ATAAACAACGACAGACAGAC+TGG	+	tig0012609:17358-17377	Msa1352540:intergenic	40.0%
!	TGAATTTTGTGCAATAGCCG+TGG	-	tig0012609:17414-17433	Msa1352540:intron	40.0%
!!	TTCACAACTAGCCTTTACCA+CGG	+	tig0012609:17434-17453	Msa1352540:intergenic	40.0%
	CAGCAAATGTCAATCAACAC+TGG	+	tig0012609:17463-17482	Msa1352540:intergenic	40.0%
	TTCAGCTTATCATCCAAGTG+TGG	+	tig0012609:17539-17558	Msa1352540:intergenic	40.0%
	TTGTCTTGCTAATGCTGTTG+TGG	-	tig0012609:17569-17588	Msa1352540:intron	40.0%
	AGCTATATCAGAAGAGCAAG+TGG	-	tig0012609:17666-17685	Msa1352540:intron	40.0%
	GCTATATCAGAAGAGCAAGT+GGG	-	tig0012609:17667-17686	Msa1352540:intron	40.0%
	CTATATCAGAAGAGCAAGTG+GGG	-	tig0012609:17668-17687	Msa1352540:intron	40.0%
	AAGAAACAAGAGGAGTTCCT+GGG	-	tig0012609:17706-17725	Msa1352540:intron	40.0%
	GAGATGACAGTTGAAATCAG+CGG	-	tig0012609:17729-17748	Msa1352540:intron	40.0%
	AGATGACAGTTGAAATCAGC+GGG	-	tig0012609:17730-17749	Msa1352540:intron	40.0%
	AACAGCACAGCAATTGATAC+AGG	-	tig0012609:17770-17789	Msa1352540:intron	40.0%
	GATACAGGTAATCCTGATCT+TGG	-	tig0012609:17785-17804	Msa1352540:intron	40.0%
	GCAAATCAAAGACCAAGATC+AGG	+	tig0012609:17800-17819	Msa1352540:intergenic	40.0%
!	TCCTAGGTTTTCTTCAGACT+AGG	-	tig0012609:17845-17864	Msa1352540:intron	40.0%
	TCCTAGTCTGAAGAAAACCT+AGG	+	tig0012609:17849-17868	Msa1352540:intergenic	40.0%
	CTAAATTAGCCCACCCTAAT+TGG	-	tig0012609:17937-17956	Msa1352540:intron	40.0%
	GAAAAGTTTGCCAATTAGGG+TGG	+	tig0012609:17950-17969	Msa1352540:intergenic	40.0%
!	ATCAAATAAATGACGGGGTG+AGG	+	tig0012609:18371-18390	Msa1352540:intergenic	40.0%
	CCCGTCATTTATTTGATGCA+AGG	-	tig0012609:18374-18393	Msa1352540:intron	40.0%
	AAATTCTGCACCACAGATTC+AGG	+	tig0012609:18580-18599	Msa1352540:intergenic	40.0%
!	TGTGGTGCAGAATTTTATGG+CGG	-	tig0012609:18585-18604	Msa1352540:CDS	40.0%
	CATAGACAGAACTATGAGCA+GGG	+	tig0012609:18675-18694	Msa1352540:intergenic	40.0%
!	TAGTTCTACTGCCTCATCAT+TGG	+	tig0012609:18765-18784	Msa1352540:intergenic	40.0%
	CTATTCGACATTGTGCTACA+TGG	-	tig0012609:18840-18859	Msa1352540:intron	40.0%
!	TGTTTCTGTTGGCAGTCATT+TGG	-	tig0012609:18915-18934	Msa1352540:intron	40.0%
	TCATCTTGAAGGGCAAAAAC+AGG	+	tig0012609:16715-16734	Msa1352540:intergenic	40.0%
!	TTTTTGCCCTTCAAGATGAC+AGG	-	tig0012609:16716-16735	Msa1352540:three_prime_UTR	40.0%
!	TTTTGCCCTTCAAGATGACA+GGG	-	tig0012609:16717-16736	Msa1352540:three_prime_UTR	40.0%
	GATCTTTCTCCAGATGCAAA+TGG	-	tig0012609:16923-16942	Msa1352540:three_prime_UTR	40.0%
	GGTTATTAGCCATTTGCATC+TGG	+	tig0012609:16935-16954	Msa1352540:intergenic	40.0%
	ATAGGCGGATATACCATGAT+GGG	+	tig0012609:17141-17160	Msa1352540:intergenic	40.0%
	ATCCCCAAAAGGAAGTAGTA+TGG	-	tig0012609:17264-17283	Msa1352540:intron	40.0%
!	CACCATACTACTTCCTTTTG+GGG	+	tig0012609:17269-17288	Msa1352540:intergenic	40.0%
	ATAAACAACGACAGACAGAC+TGG	+	tig0012609:17358-17377	Msa1352540:intergenic	40.0%
!	TGAATTTTGTGCAATAGCCG+TGG	-	tig0012609:17414-17433	Msa1352540:intron	40.0%
!!	TTCACAACTAGCCTTTACCA+CGG	+	tig0012609:17434-17453	Msa1352540:intergenic	40.0%
	CAGCAAATGTCAATCAACAC+TGG	+	tig0012609:17463-17482	Msa1352540:intergenic	40.0%
	TTCAGCTTATCATCCAAGTG+TGG	+	tig0012609:17539-17558	Msa1352540:intergenic	40.0%
	TTGTCTTGCTAATGCTGTTG+TGG	-	tig0012609:17569-17588	Msa1352540:intron	40.0%
	AGCTATATCAGAAGAGCAAG+TGG	-	tig0012609:17666-17685	Msa1352540:intron	40.0%
	GCTATATCAGAAGAGCAAGT+GGG	-	tig0012609:17667-17686	Msa1352540:intron	40.0%
	CTATATCAGAAGAGCAAGTG+GGG	-	tig0012609:17668-17687	Msa1352540:intron	40.0%
	AAGAAACAAGAGGAGTTCCT+GGG	-	tig0012609:17706-17725	Msa1352540:intron	40.0%
	GAGATGACAGTTGAAATCAG+CGG	-	tig0012609:17729-17748	Msa1352540:intron	40.0%
	AGATGACAGTTGAAATCAGC+GGG	-	tig0012609:17730-17749	Msa1352540:intron	40.0%
	AACAGCACAGCAATTGATAC+AGG	-	tig0012609:17770-17789	Msa1352540:intron	40.0%
	GATACAGGTAATCCTGATCT+TGG	-	tig0012609:17785-17804	Msa1352540:intron	40.0%
	GCAAATCAAAGACCAAGATC+AGG	+	tig0012609:17800-17819	Msa1352540:intergenic	40.0%
!	TCCTAGGTTTTCTTCAGACT+AGG	-	tig0012609:17845-17864	Msa1352540:intron	40.0%
	TCCTAGTCTGAAGAAAACCT+AGG	+	tig0012609:17849-17868	Msa1352540:intergenic	40.0%
	CTAAATTAGCCCACCCTAAT+TGG	-	tig0012609:17937-17956	Msa1352540:intron	40.0%
	GAAAAGTTTGCCAATTAGGG+TGG	+	tig0012609:17950-17969	Msa1352540:intergenic	40.0%
!	ATCAAATAAATGACGGGGTG+AGG	+	tig0012609:18371-18390	Msa1352540:intergenic	40.0%
	CCCGTCATTTATTTGATGCA+AGG	-	tig0012609:18374-18393	Msa1352540:intron	40.0%
	AAATTCTGCACCACAGATTC+AGG	+	tig0012609:18580-18599	Msa1352540:intergenic	40.0%
!	TGTGGTGCAGAATTTTATGG+CGG	-	tig0012609:18585-18604	Msa1352540:CDS	40.0%
	CATAGACAGAACTATGAGCA+GGG	+	tig0012609:18675-18694	Msa1352540:intergenic	40.0%
!	TAGTTCTACTGCCTCATCAT+TGG	+	tig0012609:18765-18784	Msa1352540:intergenic	40.0%
	CTATTCGACATTGTGCTACA+TGG	-	tig0012609:18840-18859	Msa1352540:intron	40.0%
!	TGTTTCTGTTGGCAGTCATT+TGG	-	tig0012609:18915-18934	Msa1352540:intron	40.0%
	AACCACCCTGTCATCTTGAA+GGG	+	tig0012609:16725-16744	Msa1352540:intergenic	45.0%
	ACAGGGTGGTTGAAGTAGTA+GGG	-	tig0012609:16734-16753	Msa1352540:three_prime_UTR	45.0%
	AATGGCTAATAACCACCCTG+TGG	-	tig0012609:16941-16960	Msa1352540:three_prime_UTR	45.0%
	TTATCAACTTGCCTTGGAGG+TGG	+	tig0012609:17074-17093	Msa1352540:intergenic	45.0%
	TAGGCGGATATACCATGATG+GGG	+	tig0012609:17140-17159	Msa1352540:intergenic	45.0%
	CATAGGCGGATATACCATGA+TGG	+	tig0012609:17142-17161	Msa1352540:intergenic	45.0%
	CATCATGGTATATCCGCCTA+TGG	-	tig0012609:17140-17159	Msa1352540:CDS	45.0%
!	TGAAGCATCTCTTCCATAGG+CGG	+	tig0012609:17156-17175	Msa1352540:intergenic	45.0%
!!	GAAAAGTACCTGTGTGACCA+TGG	+	tig0012609:17219-17238	Msa1352540:intergenic	45.0%
	TTGTGCAATAGCCGTGGTAA+AGG	-	tig0012609:17420-17439	Msa1352540:intron	45.0%
	AGATAGCAGAGGGTGATGTT+AGG	-	tig0012609:17511-17530	Msa1352540:intron	45.0%
	GTGATGTTAGGTTCCACACT+TGG	-	tig0012609:17523-17542	Msa1352540:intron	45.0%
	TCGTACGCTGATGCTGTTAT+TGG	-	tig0012609:17624-17643	Msa1352540:intron	45.0%
	GATGCTGTTATTGGAACAGC+CGG	-	tig0012609:17633-17652	Msa1352540:intron	45.0%
	CAAGAAACAAGAGGAGTTCC+TGG	-	tig0012609:17705-17724	Msa1352540:intron	45.0%
	AGAAACAAGAGGAGTTCCTG+GGG	-	tig0012609:17707-17726	Msa1352540:intron	45.0%
	ATTTCAACTGTCATCTCCCC+AGG	+	tig0012609:17726-17745	Msa1352540:intergenic	45.0%
!	AATAAATGACGGGGTGAGGA+TGG	+	tig0012609:18367-18386	Msa1352540:intergenic	45.0%
!	AGACATGCATTCGGTGAGAT+AGG	+	tig0012609:18497-18516	Msa1352540:intergenic	45.0%
	ATCTCACCGAATGCATGTCT+TGG	-	tig0012609:18497-18516	Msa1352540:intron	45.0%
	GAATTGTATCCTTGGTCTGC+AGG	+	tig0012609:18649-18668	Msa1352540:intergenic	45.0%
	CAGGGTAGGAATTGTATCCT+TGG	+	tig0012609:18657-18676	Msa1352540:intergenic	45.0%
	GCATAGACAGAACTATGAGC+AGG	+	tig0012609:18676-18695	Msa1352540:intergenic	45.0%
	GTAGCCTATGGTGCAGTTTA+TGG	-	tig0012609:18724-18743	Msa1352540:CDS	45.0%
	TGCACCATAAACTGCACCAT+AGG	+	tig0012609:18731-18750	Msa1352540:intergenic	45.0%
!!	CACCAGTGTTCTGTTTCTGT+TGG	-	tig0012609:18904-18923	Msa1352540:intron	45.0%
	TGCCAACAGAAACAGAACAC+TGG	+	tig0012609:18909-18928	Msa1352540:intergenic	45.0%
	CTGTTGGCAGTCATTTGGAA+AGG	-	tig0012609:18920-18939	Msa1352540:intron	45.0%
	AACCACCCTGTCATCTTGAA+GGG	+	tig0012609:16725-16744	Msa1352540:intergenic	45.0%
	ACAGGGTGGTTGAAGTAGTA+GGG	-	tig0012609:16734-16753	Msa1352540:three_prime_UTR	45.0%
	AATGGCTAATAACCACCCTG+TGG	-	tig0012609:16941-16960	Msa1352540:three_prime_UTR	45.0%
	TTATCAACTTGCCTTGGAGG+TGG	+	tig0012609:17074-17093	Msa1352540:intergenic	45.0%
	TAGGCGGATATACCATGATG+GGG	+	tig0012609:17140-17159	Msa1352540:intergenic	45.0%
	CATAGGCGGATATACCATGA+TGG	+	tig0012609:17142-17161	Msa1352540:intergenic	45.0%
	CATCATGGTATATCCGCCTA+TGG	-	tig0012609:17140-17159	Msa1352540:CDS	45.0%
!	TGAAGCATCTCTTCCATAGG+CGG	+	tig0012609:17156-17175	Msa1352540:intergenic	45.0%
!!	GAAAAGTACCTGTGTGACCA+TGG	+	tig0012609:17219-17238	Msa1352540:intergenic	45.0%
	TTGTGCAATAGCCGTGGTAA+AGG	-	tig0012609:17420-17439	Msa1352540:intron	45.0%
	AGATAGCAGAGGGTGATGTT+AGG	-	tig0012609:17511-17530	Msa1352540:intron	45.0%
	GTGATGTTAGGTTCCACACT+TGG	-	tig0012609:17523-17542	Msa1352540:intron	45.0%
	TCGTACGCTGATGCTGTTAT+TGG	-	tig0012609:17624-17643	Msa1352540:intron	45.0%
	GATGCTGTTATTGGAACAGC+CGG	-	tig0012609:17633-17652	Msa1352540:intron	45.0%
	CAAGAAACAAGAGGAGTTCC+TGG	-	tig0012609:17705-17724	Msa1352540:intron	45.0%
	AGAAACAAGAGGAGTTCCTG+GGG	-	tig0012609:17707-17726	Msa1352540:intron	45.0%
	ATTTCAACTGTCATCTCCCC+AGG	+	tig0012609:17726-17745	Msa1352540:intergenic	45.0%
!	AATAAATGACGGGGTGAGGA+TGG	+	tig0012609:18367-18386	Msa1352540:intergenic	45.0%
!	AGACATGCATTCGGTGAGAT+AGG	+	tig0012609:18497-18516	Msa1352540:intergenic	45.0%
	ATCTCACCGAATGCATGTCT+TGG	-	tig0012609:18497-18516	Msa1352540:intron	45.0%
	GAATTGTATCCTTGGTCTGC+AGG	+	tig0012609:18649-18668	Msa1352540:intergenic	45.0%
	CAGGGTAGGAATTGTATCCT+TGG	+	tig0012609:18657-18676	Msa1352540:intergenic	45.0%
	GCATAGACAGAACTATGAGC+AGG	+	tig0012609:18676-18695	Msa1352540:intergenic	45.0%
	GTAGCCTATGGTGCAGTTTA+TGG	-	tig0012609:18724-18743	Msa1352540:CDS	45.0%
	TGCACCATAAACTGCACCAT+AGG	+	tig0012609:18731-18750	Msa1352540:intergenic	45.0%
!!	CACCAGTGTTCTGTTTCTGT+TGG	-	tig0012609:18904-18923	Msa1352540:intron	45.0%
	TGCCAACAGAAACAGAACAC+TGG	+	tig0012609:18909-18928	Msa1352540:intergenic	45.0%
	CTGTTGGCAGTCATTTGGAA+AGG	-	tig0012609:18920-18939	Msa1352540:intron	45.0%
	CAACCACCCTGTCATCTTGA+AGG	+	tig0012609:16726-16745	Msa1352540:intergenic	50.0%
	GACAGGGTGGTTGAAGTAGT+AGG	-	tig0012609:16733-16752	Msa1352540:three_prime_UTR	50.0%
	CAGGGTGGTTGAAGTAGTAG+GGG	-	tig0012609:16735-16754	Msa1352540:three_prime_UTR	50.0%
	GAAGTAGTAGGGGATCCCAT+TGG	-	tig0012609:16745-16764	Msa1352540:three_prime_UTR	50.0%
	ACTGCCTTGTGCACTCCAAT+GGG	+	tig0012609:16763-16782	Msa1352540:intergenic	50.0%
	TGAGGAGCAAGTCCAAATCC+AGG	+	tig0012609:17044-17063	Msa1352540:intergenic	50.0%
	CTTGGAGGTGGCATGAATTG+AGG	+	tig0012609:17062-17081	Msa1352540:intergenic	50.0%
	CTCAATTCATGCCACCTCCA+AGG	-	tig0012609:17060-17079	Msa1352540:CDS	50.0%
	TGATGGGGCTGTTTGTCCAA+TGG	+	tig0012609:17125-17144	Msa1352540:intergenic	50.0%
	TTGGACAAACAGCCCCATCA+TGG	-	tig0012609:17125-17144	Msa1352540:CDS	50.0%
!	GGAAGGTGCAGACTGAGTAT+TGG	+	tig0012609:17198-17217	Msa1352540:intergenic	50.0%
	TACTCAGTCTGCACCTTCCA+TGG	-	tig0012609:17199-17218	Msa1352540:intron	50.0%
	AGTACCTGTGTGACCATGGA+AGG	+	tig0012609:17215-17234	Msa1352540:intergenic	50.0%
	ACAGCATCAGCGTACGATAG+AGG	+	tig0012609:17621-17640	Msa1352540:intergenic	50.0%
	TCATAGCATGCGGCATGTCT+TGG	-	tig0012609:18117-18136	Msa1352540:CDS	50.0%
	TTGTATCCTTGGTCTGCAGG+AGG	+	tig0012609:18646-18665	Msa1352540:intergenic	50.0%
	GACAGAACTATGAGCAGGGT+AGG	+	tig0012609:18671-18690	Msa1352540:intergenic	50.0%
!	ACAGCATGTCCTGGATTGGA+AGG	+	tig0012609:18706-18725	Msa1352540:intergenic	50.0%
	CAACCACCCTGTCATCTTGA+AGG	+	tig0012609:16726-16745	Msa1352540:intergenic	50.0%
	GACAGGGTGGTTGAAGTAGT+AGG	-	tig0012609:16733-16752	Msa1352540:three_prime_UTR	50.0%
	CAGGGTGGTTGAAGTAGTAG+GGG	-	tig0012609:16735-16754	Msa1352540:three_prime_UTR	50.0%
	GAAGTAGTAGGGGATCCCAT+TGG	-	tig0012609:16745-16764	Msa1352540:three_prime_UTR	50.0%
	ACTGCCTTGTGCACTCCAAT+GGG	+	tig0012609:16763-16782	Msa1352540:intergenic	50.0%
	TGAGGAGCAAGTCCAAATCC+AGG	+	tig0012609:17044-17063	Msa1352540:intergenic	50.0%
	CTTGGAGGTGGCATGAATTG+AGG	+	tig0012609:17062-17081	Msa1352540:intergenic	50.0%
	CTCAATTCATGCCACCTCCA+AGG	-	tig0012609:17060-17079	Msa1352540:CDS	50.0%
	TGATGGGGCTGTTTGTCCAA+TGG	+	tig0012609:17125-17144	Msa1352540:intergenic	50.0%
	TTGGACAAACAGCCCCATCA+TGG	-	tig0012609:17125-17144	Msa1352540:CDS	50.0%
!	GGAAGGTGCAGACTGAGTAT+TGG	+	tig0012609:17198-17217	Msa1352540:intergenic	50.0%
	TACTCAGTCTGCACCTTCCA+TGG	-	tig0012609:17199-17218	Msa1352540:intron	50.0%
	AGTACCTGTGTGACCATGGA+AGG	+	tig0012609:17215-17234	Msa1352540:intergenic	50.0%
	ACAGCATCAGCGTACGATAG+AGG	+	tig0012609:17621-17640	Msa1352540:intergenic	50.0%
	TCATAGCATGCGGCATGTCT+TGG	-	tig0012609:18117-18136	Msa1352540:CDS	50.0%
	TTGTATCCTTGGTCTGCAGG+AGG	+	tig0012609:18646-18665	Msa1352540:intergenic	50.0%
	GACAGAACTATGAGCAGGGT+AGG	+	tig0012609:18671-18690	Msa1352540:intergenic	50.0%
!	ACAGCATGTCCTGGATTGGA+AGG	+	tig0012609:18706-18725	Msa1352540:intergenic	50.0%
	TGCCCTTCAAGATGACAGGG+TGG	-	tig0012609:16720-16739	Msa1352540:three_prime_UTR	55.0%
	GGATCCCATTGGAGTGCACA+AGG	-	tig0012609:16756-16775	Msa1352540:three_prime_UTR	55.0%
	CACTGCCTTGTGCACTCCAA+TGG	+	tig0012609:16764-16783	Msa1352540:intergenic	55.0%
	CATTGGAGTGCACAAGGCAG+TGG	-	tig0012609:16762-16781	Msa1352540:three_prime_UTR	55.0%
	ACCACCACCCCACCAATCAT+GGG	-	tig0012609:16980-16999	Msa1352540:three_prime_UTR	55.0%
	AGGTGGACCCCATGATTGGT+GGG	+	tig0012609:16991-17010	Msa1352540:intergenic	55.0%
	CAATCATGGGGTCCACCTCA+GGG	-	tig0012609:16993-17012	Msa1352540:three_prime_UTR	55.0%
	GACCTCCACCAGCATTTGGT+GGG	+	tig0012609:17022-17041	Msa1352540:intergenic	55.0%
!!	AATGGAGGGGGCATTTCAGC+TGG	+	tig0012609:17107-17126	Msa1352540:intergenic	55.0%
	AGCTGAAATGCCCCCTCCAT+TGG	-	tig0012609:17106-17125	Msa1352540:CDS	55.0%
	GGCTGTTTGTCCAATGGAGG+GGG	+	tig0012609:17119-17138	Msa1352540:intergenic	55.0%
	GGGCTGTTTGTCCAATGGAG+GGG	+	tig0012609:17120-17139	Msa1352540:intergenic	55.0%
	GGGGCTGTTTGTCCAATGGA+GGG	+	tig0012609:17121-17140	Msa1352540:intergenic	55.0%
	TGGGGCTGTTTGTCCAATGG+AGG	+	tig0012609:17122-17141	Msa1352540:intergenic	55.0%
	TGCACCTTCCATGGTCACAC+AGG	-	tig0012609:17208-17227	Msa1352540:intron	55.0%
!	GCATGTCCTGGATTGGAAGG+TGG	+	tig0012609:18703-18722	Msa1352540:intergenic	55.0%
	GGCTACAGCATGTCCTGGAT+TGG	+	tig0012609:18710-18729	Msa1352540:intergenic	55.0%
	CCATAGGCTACAGCATGTCC+TGG	+	tig0012609:18715-18734	Msa1352540:intergenic	55.0%
	CCAGGACATGCTGTAGCCTA+TGG	-	tig0012609:18712-18731	Msa1352540:CDS	55.0%
	TGCCCTTCAAGATGACAGGG+TGG	-	tig0012609:16720-16739	Msa1352540:three_prime_UTR	55.0%
	GGATCCCATTGGAGTGCACA+AGG	-	tig0012609:16756-16775	Msa1352540:three_prime_UTR	55.0%
	CACTGCCTTGTGCACTCCAA+TGG	+	tig0012609:16764-16783	Msa1352540:intergenic	55.0%
	CATTGGAGTGCACAAGGCAG+TGG	-	tig0012609:16762-16781	Msa1352540:three_prime_UTR	55.0%
	ACCACCACCCCACCAATCAT+GGG	-	tig0012609:16980-16999	Msa1352540:three_prime_UTR	55.0%
	AGGTGGACCCCATGATTGGT+GGG	+	tig0012609:16991-17010	Msa1352540:intergenic	55.0%
	CAATCATGGGGTCCACCTCA+GGG	-	tig0012609:16993-17012	Msa1352540:three_prime_UTR	55.0%
	GACCTCCACCAGCATTTGGT+GGG	+	tig0012609:17022-17041	Msa1352540:intergenic	55.0%
!!	AATGGAGGGGGCATTTCAGC+TGG	+	tig0012609:17107-17126	Msa1352540:intergenic	55.0%
	AGCTGAAATGCCCCCTCCAT+TGG	-	tig0012609:17106-17125	Msa1352540:CDS	55.0%
	GGCTGTTTGTCCAATGGAGG+GGG	+	tig0012609:17119-17138	Msa1352540:intergenic	55.0%
	GGGCTGTTTGTCCAATGGAG+GGG	+	tig0012609:17120-17139	Msa1352540:intergenic	55.0%
	GGGGCTGTTTGTCCAATGGA+GGG	+	tig0012609:17121-17140	Msa1352540:intergenic	55.0%
	TGGGGCTGTTTGTCCAATGG+AGG	+	tig0012609:17122-17141	Msa1352540:intergenic	55.0%
	TGCACCTTCCATGGTCACAC+AGG	-	tig0012609:17208-17227	Msa1352540:intron	55.0%
!	GCATGTCCTGGATTGGAAGG+TGG	+	tig0012609:18703-18722	Msa1352540:intergenic	55.0%
	GGCTACAGCATGTCCTGGAT+TGG	+	tig0012609:18710-18729	Msa1352540:intergenic	55.0%
	CCATAGGCTACAGCATGTCC+TGG	+	tig0012609:18715-18734	Msa1352540:intergenic	55.0%
	CCAGGACATGCTGTAGCCTA+TGG	-	tig0012609:18712-18731	Msa1352540:CDS	55.0%
!	GCACTGGCATGTGCTCCACA+GGG	+	tig0012609:16959-16978	Msa1352540:intergenic	60.0%
!	CATGATTGGTGGGGTGGTGG+TGG	+	tig0012609:16981-17000	Msa1352540:intergenic	60.0%
	CACCACCACCCCACCAATCA+TGG	-	tig0012609:16979-16998	Msa1352540:three_prime_UTR	60.0%
	CCACCACCCCACCAATCATG+GGG	-	tig0012609:16981-17000	Msa1352540:three_prime_UTR	60.0%
	GGTGGACCCCATGATTGGTG+GGG	+	tig0012609:16990-17009	Msa1352540:intergenic	60.0%
	GAGGTGGACCCCATGATTGG+TGG	+	tig0012609:16992-17011	Msa1352540:intergenic	60.0%
	CCTGAGGTGGACCCCATGAT+TGG	+	tig0012609:16995-17014	Msa1352540:intergenic	60.0%
	CCAATCATGGGGTCCACCTC+AGG	-	tig0012609:16992-17011	Msa1352540:three_prime_UTR	60.0%
	TTTGGTGGGAGACCCTGAGG+TGG	+	tig0012609:17008-17027	Msa1352540:intergenic	60.0%
!	GCATTTGGTGGGAGACCCTG+AGG	+	tig0012609:17011-17030	Msa1352540:intergenic	60.0%
	CAGGGTCTCCCACCAAATGC+TGG	-	tig0012609:17011-17030	Msa1352540:exon	60.0%
	GGTCTCCCACCAAATGCTGG+TGG	-	tig0012609:17014-17033	Msa1352540:CDS	60.0%
	CTCCCACCAAATGCTGGTGG+AGG	-	tig0012609:17017-17036	Msa1352540:CDS	60.0%
	GGACCTCCACCAGCATTTGG+TGG	+	tig0012609:17023-17042	Msa1352540:intergenic	60.0%
	CCAGGACCTCCACCAGCATT+TGG	+	tig0012609:17026-17045	Msa1352540:intergenic	60.0%
	CCAAATGCTGGTGGAGGTCC+TGG	-	tig0012609:17023-17042	Msa1352540:CDS	60.0%
	GCTGGTGGAGGTCCTGGATT+TGG	-	tig0012609:17029-17048	Msa1352540:CDS	60.0%
!!	GAGGGGGCATTTCAGCTGGT+GGG	+	tig0012609:17103-17122	Msa1352540:intergenic	60.0%
!	TATGGCGGAAGCTGCAGCAC+CGG	-	tig0012609:18600-18619	Msa1352540:CDS	60.0%
!	CCACCTGTTTGTTGCTGCGC+CGG	+	tig0012609:18622-18641	Msa1352540:intergenic	60.0%
	CGGCGCAGCAACAAACAGGT+GGG	-	tig0012609:18620-18639	Msa1352540:CDS	60.0%
	GCGTCACCACCTTCCAATCC+AGG	-	tig0012609:18694-18713	Msa1352540:CDS	60.0%
!	GCACTGGCATGTGCTCCACA+GGG	+	tig0012609:16959-16978	Msa1352540:intergenic	60.0%
!	CATGATTGGTGGGGTGGTGG+TGG	+	tig0012609:16981-17000	Msa1352540:intergenic	60.0%
	CACCACCACCCCACCAATCA+TGG	-	tig0012609:16979-16998	Msa1352540:three_prime_UTR	60.0%
	CCACCACCCCACCAATCATG+GGG	-	tig0012609:16981-17000	Msa1352540:three_prime_UTR	60.0%
	GGTGGACCCCATGATTGGTG+GGG	+	tig0012609:16990-17009	Msa1352540:intergenic	60.0%
	GAGGTGGACCCCATGATTGG+TGG	+	tig0012609:16992-17011	Msa1352540:intergenic	60.0%
	CCTGAGGTGGACCCCATGAT+TGG	+	tig0012609:16995-17014	Msa1352540:intergenic	60.0%
	CCAATCATGGGGTCCACCTC+AGG	-	tig0012609:16992-17011	Msa1352540:three_prime_UTR	60.0%
	TTTGGTGGGAGACCCTGAGG+TGG	+	tig0012609:17008-17027	Msa1352540:intergenic	60.0%
!	GCATTTGGTGGGAGACCCTG+AGG	+	tig0012609:17011-17030	Msa1352540:intergenic	60.0%
	CAGGGTCTCCCACCAAATGC+TGG	-	tig0012609:17011-17030	Msa1352540:exon	60.0%
	GGTCTCCCACCAAATGCTGG+TGG	-	tig0012609:17014-17033	Msa1352540:CDS	60.0%
	CTCCCACCAAATGCTGGTGG+AGG	-	tig0012609:17017-17036	Msa1352540:CDS	60.0%
	GGACCTCCACCAGCATTTGG+TGG	+	tig0012609:17023-17042	Msa1352540:intergenic	60.0%
	CCAGGACCTCCACCAGCATT+TGG	+	tig0012609:17026-17045	Msa1352540:intergenic	60.0%
	CCAAATGCTGGTGGAGGTCC+TGG	-	tig0012609:17023-17042	Msa1352540:CDS	60.0%
	GCTGGTGGAGGTCCTGGATT+TGG	-	tig0012609:17029-17048	Msa1352540:CDS	60.0%
!!	GAGGGGGCATTTCAGCTGGT+GGG	+	tig0012609:17103-17122	Msa1352540:intergenic	60.0%
!	TATGGCGGAAGCTGCAGCAC+CGG	-	tig0012609:18600-18619	Msa1352540:CDS	60.0%
!	CCACCTGTTTGTTGCTGCGC+CGG	+	tig0012609:18622-18641	Msa1352540:intergenic	60.0%
	CGGCGCAGCAACAAACAGGT+GGG	-	tig0012609:18620-18639	Msa1352540:CDS	60.0%
	GCGTCACCACCTTCCAATCC+AGG	-	tig0012609:18694-18713	Msa1352540:CDS	60.0%
	CTGGCATGTGCTCCACAGGG+TGG	+	tig0012609:16956-16975	Msa1352540:intergenic	65.0%
!!	GGCACTGGCATGTGCTCCAC+AGG	+	tig0012609:16960-16979	Msa1352540:intergenic	65.0%
	CCCCATGATTGGTGGGGTGG+TGG	+	tig0012609:16984-17003	Msa1352540:intergenic	65.0%
	GGACCCCATGATTGGTGGGG+TGG	+	tig0012609:16987-17006	Msa1352540:intergenic	65.0%
!!	GGAGGGGGCATTTCAGCTGG+TGG	+	tig0012609:17104-17123	Msa1352540:intergenic	65.0%
!	GCACCGGCGCAGCAACAAAC+AGG	-	tig0012609:18616-18635	Msa1352540:CDS	65.0%
	CCGGCGCAGCAACAAACAGG+TGG	-	tig0012609:18619-18638	Msa1352540:CDS	65.0%
	CTGGCATGTGCTCCACAGGG+TGG	+	tig0012609:16956-16975	Msa1352540:intergenic	65.0%
!!	GGCACTGGCATGTGCTCCAC+AGG	+	tig0012609:16960-16979	Msa1352540:intergenic	65.0%
	CCCCATGATTGGTGGGGTGG+TGG	+	tig0012609:16984-17003	Msa1352540:intergenic	65.0%
	GGACCCCATGATTGGTGGGG+TGG	+	tig0012609:16987-17006	Msa1352540:intergenic	65.0%
!!	GGAGGGGGCATTTCAGCTGG+TGG	+	tig0012609:17104-17123	Msa1352540:intergenic	65.0%
!	GCACCGGCGCAGCAACAAAC+AGG	-	tig0012609:18616-18635	Msa1352540:CDS	65.0%
	CCGGCGCAGCAACAAACAGG+TGG	-	tig0012609:18619-18638	Msa1352540:CDS	65.0%
!!	TGGTGGGGTGGTGGTGGCAC+TGG	+	tig0012609:16975-16994	Msa1352540:intergenic	70.0%
	GGTGGGCCTCCTGCAGACCA+AGG	-	tig0012609:18637-18656	Msa1352540:CDS	70.0%
!!	TGGTGGGGTGGTGGTGGCAC+TGG	+	tig0012609:16975-16994	Msa1352540:intergenic	70.0%
	GGTGGGCCTCCTGCAGACCA+AGG	-	tig0012609:18637-18656	Msa1352540:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
tig0012609	gene	16694	19088	16694	ID=Msa1352540;Name=Msa1352540
tig0012609	mRNA	16694	19088	16694	ID=Msa1352540-mRNA-1;Parent=Msa1352540;Name=Msa1352540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0\|1\|0.75\|1\|1\|1\|4\|320\|273
tig0012609	exon	16694	17187	16694	ID=Msa1352540-mRNA-1:exon:8210;Parent=Msa1352540-mRNA-1
tig0012609	exon	17991	18185	17991	ID=Msa1352540-mRNA-1:exon:8209;Parent=Msa1352540-mRNA-1
tig0012609	exon	18553	18846	18553	ID=Msa1352540-mRNA-1:exon:8208;Parent=Msa1352540-mRNA-1
tig0012609	exon	18930	19088	18930	ID=Msa1352540-mRNA-1:exon:8207;Parent=Msa1352540-mRNA-1
tig0012609	CDS	18930	19088	18930	ID=Msa1352540-mRNA-1:cds;Parent=Msa1352540-mRNA-1
tig0012609	CDS	18553	18846	18553	ID=Msa1352540-mRNA-1:cds;Parent=Msa1352540-mRNA-1
tig0012609	CDS	17991	18185	17991	ID=Msa1352540-mRNA-1:cds;Parent=Msa1352540-mRNA-1
tig0012609	CDS	17014	17187	17014	ID=Msa1352540-mRNA-1:cds;Parent=Msa1352540-mRNA-1
tig0012609	three_prime_UTR	16694	17013	16694	ID=Msa1352540-mRNA-1:three_prime_utr;Parent=Msa1352540-mRNA-1

Gene Sequence

>Msa1352540

TTGTCTGCAGAAGATCTGCCTGTTTTTGCCCTTCAAGATGACAGGGTGGTTGAAGTAGTAGGGGATCCCATTGGAGTGCACAAGGCAGTGGAGATGATTGCATCCCACCTTAAGAAATTTTTAGTTGATCGCAGTATAATTCCAATTTTTGAAATGAATATGCAAATGGCTAATAACCACCCTGTGGAGCACATGCCAGTGCCACCACCACCCCACCAATCATGGGGTCCACCTCAGGGTCTCCCACCAAATGCTGGTGGAGGTCCTGGATTTGGACTTGCTCCTCAATTCATGCCACCTCCAAGGCAAGTTGATAATTACTACCCACCAGCTGAAATGCCCCCTCCATTGGACAAACAGCCCCATCATGGTATATCCGCCTATGGAAGAGATGCTTCAATAGGAGTTCACGCATCATCCAATACTCAGTCTGCACCTTCCATGGTCACACAGATCACGCAGCAAATGCAAATTCCTCTATCGTACGCTGATGCTGTTATTGGAACAGCCGGAACAAATATAAGCTATATCAGAAGAGCAAGTGGGGCCACTGTTACCATACAAGAAACAAGAGGAGTTCCTGGGGAGATGACAGTTGAAATCAGCGGGACTGCTTCTCAAGTTCAAACAGCACAGCAATTGATACAGAATTTTATGGCGGAAGCTGCAGCACCGGCGCAGCAACAAACAGGTGGGCCTCCTGCAGACCAAGGATACAATTCCTACCCTGCTCATAGTTCTGTCTATGCGTCACCACCTTCCAATCCAGGACATGCTGTAGCCTATGGTGCAGTTTATGGTGCAAATTATGGGTACCAATGA

Protein sequence

>Msa1352540

LSAEDLPVFALQDDRVVEVVGDPIGVHKAVEMIASHLKKFLVDRSIIPIFEMNMQMANNHPVEHMPVPPPPHQSWGPPQGLPPNAGGGPGFGLAPQFMPPPRQVDNYYPPAEMPPPLDKQPHHGISAYGRDASIGVHASSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPAQQQTGGPPADQGYNSYPAHSSVYASPPSNPGHAVAYGAVYGANYGYQ*