Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243100 | XP_013444836.1 | 92.634 | 448 | 14 | 3 | 1 | 429 | 1 | 448 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243100 | A0A072TNX6 | 92.634 | 448 | 14 | 3 | 1 | 429 | 1 | 448 | 0.0 | 819 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa1243100 | 0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa0029850 | Msa1243100 | 0.828874 | 7.053764e-55 | -8.615850e-47 |
| Msa0036920 | Msa1243100 | 0.807769 | 4.299237e-50 | -8.615850e-47 |
| Msa0038720 | Msa1243100 | 0.800132 | 1.663646e-48 | -8.615850e-47 |
| Msa0042920 | Msa1243100 | 0.806089 | 9.741258e-50 | -8.615850e-47 |
| Msa0050930 | Msa1243100 | 0.821398 | 4.125028e-53 | -8.615850e-47 |
| Msa0058270 | Msa1243100 | 0.804172 | 2.453989e-49 | -8.615850e-47 |
| Msa0077180 | Msa1243100 | 0.804026 | 2.631876e-49 | -8.615850e-47 |
| Msa0078610 | Msa1243100 | 0.822798 | 1.953246e-53 | -8.615850e-47 |
| Msa0085720 | Msa1243100 | 0.803249 | 3.815677e-49 | -8.615850e-47 |
| Msa0100080 | Msa1243100 | 0.805210 | 1.489825e-49 | -8.615850e-47 |
| Msa0100090 | Msa1243100 | 0.804203 | 2.417336e-49 | -8.615850e-47 |
| Msa0117770 | Msa1243100 | 0.805515 | 1.286048e-49 | -8.615850e-47 |
| Msa0607540 | Msa1243100 | 0.801368 | 9.307020e-49 | -8.615850e-47 |
| Msa0612930 | Msa1243100 | 0.808072 | 3.706979e-50 | -8.615850e-47 |
| Msa0622170 | Msa1243100 | -0.850040 | 2.195137e-60 | -8.615850e-47 |
| Msa0626990 | Msa1243100 | 0.813452 | 2.541964e-51 | -8.615850e-47 |
| Msa0627350 | Msa1243100 | 0.810654 | 1.035314e-50 | -8.615850e-47 |
| Msa0647830 | Msa1243100 | 0.812716 | 3.684893e-51 | -8.615850e-47 |
| Msa0654930 | Msa1243100 | -0.803021 | 4.252595e-49 | -8.615850e-47 |
| Msa0657610 | Msa1243100 | 0.808336 | 3.256426e-50 | -8.615850e-47 |
| Msa0658570 | Msa1243100 | 0.835336 | 1.780512e-56 | -8.615850e-47 |
| Msa0672690 | Msa1243100 | 0.807338 | 5.306613e-50 | -8.615850e-47 |
| Msa0688070 | Msa1243100 | 0.830813 | 2.376608e-55 | -8.615850e-47 |
| Msa0690440 | Msa1243100 | 0.817919 | 2.568570e-52 | -8.615850e-47 |
| Msa0695870 | Msa1243100 | 0.804045 | 2.608483e-49 | -8.615850e-47 |
| Msa0715410 | Msa1243100 | 0.812960 | 3.258817e-51 | -8.615850e-47 |
| Msa0724210 | Msa1243100 | 0.822640 | 2.126456e-53 | -8.615850e-47 |
| Msa0744170 | Msa1243100 | -0.823094 | 1.666394e-53 | -8.615850e-47 |
| Msa0807030 | Msa1243100 | 0.821683 | 3.543994e-53 | -8.615850e-47 |
| Msa0818110 | Msa1243100 | 0.811756 | 5.971491e-51 | -8.615850e-47 |
| Msa0825240 | Msa1243100 | -0.803091 | 4.112156e-49 | -8.615850e-47 |
| Msa0831850 | Msa1243100 | 0.809098 | 2.238196e-50 | -8.615850e-47 |
| Msa0832970 | Msa1243100 | 0.807230 | 5.593935e-50 | -8.615850e-47 |
| Msa0133980 | Msa1243100 | -0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0169820 | Msa1243100 | 0.839966 | 1.154936e-57 | -8.615850e-47 |
| Msa0178510 | Msa1243100 | 0.805027 | 1.627311e-49 | -8.615850e-47 |
| Msa0183010 | Msa1243100 | -0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0199800 | Msa1243100 | -0.843952 | 1.020907e-58 | -8.615850e-47 |
| Msa0230640 | Msa1243100 | -0.816788 | 4.616179e-52 | -8.615850e-47 |
| Msa0234440 | Msa1243100 | 0.827442 | 1.561162e-54 | -8.615850e-47 |
| Msa1229600 | Msa1243100 | 0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa1243100 | Msa1262750 | 0.823985 | 1.031513e-53 | -8.615850e-47 |
| Msa1243100 | Msa1267060 | 0.817112 | 3.904831e-52 | -8.615850e-47 |
| Msa1243100 | Msa1267610 | 0.837698 | 4.459267e-57 | -8.615850e-47 |
| Msa1243100 | Msa1295540 | -0.801759 | 7.737776e-49 | -8.615850e-47 |
| Msa1243100 | Msa1297310 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
| Msa1243100 | Msa1304890 | -0.859550 | 3.826568e-63 | -8.615850e-47 |
| Msa1243100 | Msa1305350 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa1243100 | Msa1311340 | 0.808348 | 3.236350e-50 | -8.615850e-47 |
| Msa1243100 | Msa1333730 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa1243100 | Msa1372150 | 0.805738 | 1.154729e-49 | -8.615850e-47 |
| Msa1243100 | Msa1376160 | -0.819612 | 1.060084e-52 | -8.615850e-47 |
| Msa1243100 | Msa1376890 | 0.829868 | 4.046751e-55 | -8.615850e-47 |
| Msa1243100 | Msa1376930 | 0.829437 | 5.151079e-55 | -8.615850e-47 |
| Msa1243100 | Msa1378940 | 0.800763 | 1.237160e-48 | -8.615850e-47 |
| Msa1243100 | Msa1385020 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa1243100 | Msa1386750 | 0.832817 | 7.612024e-56 | -8.615850e-47 |
| Msa1243100 | Msa1393410 | 0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa1243100 | Msa1401530 | 0.809356 | 1.970397e-50 | -8.615850e-47 |
| Msa1243100 | Msa1423880 | 0.819385 | 1.194125e-52 | -8.615850e-47 |
| Msa1243100 | Msa1435400 | 0.838808 | 2.307141e-57 | -8.615850e-47 |
| Msa1243100 | Msa1435420 | 0.807436 | 5.059013e-50 | -8.615850e-47 |
| Msa1243100 | Msa1440940 | 0.843329 | 1.498654e-58 | -8.615850e-47 |
| Msa1243100 | Msa1451620 | -0.849341 | 3.440684e-60 | -8.615850e-47 |
| Msa1243100 | Msa1459050 | 0.821153 | 4.696538e-53 | -8.615850e-47 |
| Msa1243100 | Msa1461810 | -0.828364 | 9.368848e-55 | -8.615850e-47 |
| Msa0365490 | Msa1243100 | 0.810015 | 1.422065e-50 | -8.615850e-47 |
| Msa0379640 | Msa1243100 | 0.807424 | 5.089294e-50 | -8.615850e-47 |
| Msa0388960 | Msa1243100 | 0.812818 | 3.500579e-51 | -8.615850e-47 |
| Msa0392040 | Msa1243100 | -0.846171 | 2.567794e-59 | -8.615850e-47 |
| Msa0393620 | Msa1243100 | 0.838295 | 3.131341e-57 | -8.615850e-47 |
| Msa0409200 | Msa1243100 | 0.819265 | 1.271487e-52 | -8.615850e-47 |
| Msa0426900 | Msa1243100 | 0.802015 | 6.856434e-49 | -8.615850e-47 |
| Msa0433410 | Msa1243100 | -0.827694 | 1.358277e-54 | -8.615850e-47 |
| Msa0444750 | Msa1243100 | -0.833255 | 5.922058e-56 | -8.615850e-47 |
| Msa0445280 | Msa1243100 | 0.800775 | 1.230461e-48 | -8.615850e-47 |
| Msa0453000 | Msa1243100 | 0.808819 | 2.567874e-50 | -8.615850e-47 |
| Msa0458440 | Msa1243100 | 0.807283 | 5.451201e-50 | -8.615850e-47 |
| Msa0466390 | Msa1243100 | 0.810167 | 1.318682e-50 | -8.615850e-47 |
| Msa0469940 | Msa1243100 | -0.849138 | 3.918142e-60 | -8.615850e-47 |
| Msa0482180 | Msa1243100 | 0.815748 | 7.886921e-52 | -8.615850e-47 |
| Msa1021510 | Msa1243100 | 0.840960 | 6.347991e-58 | -8.615850e-47 |
| Msa1033410 | Msa1243100 | -0.803512 | 3.364811e-49 | -8.615850e-47 |
| Msa1033780 | Msa1243100 | 0.802943 | 4.413613e-49 | -8.615850e-47 |
| Msa1039710 | Msa1243100 | -0.853855 | 1.813024e-61 | -8.615850e-47 |
| Msa1041600 | Msa1243100 | -0.825551 | 4.406463e-54 | -8.615850e-47 |
| Msa1052330 | Msa1243100 | 0.812333 | 4.468905e-51 | -8.615850e-47 |
| Msa1054990 | Msa1243100 | 0.806814 | 6.850389e-50 | -8.615850e-47 |
| Msa1068200 | Msa1243100 | -0.802161 | 6.398199e-49 | -8.615850e-47 |
| Msa1075080 | Msa1243100 | -0.824289 | 8.747917e-54 | -8.615850e-47 |
| Msa1075220 | Msa1243100 | -0.831233 | 1.875017e-55 | -8.615850e-47 |
| Msa1098250 | Msa1243100 | 0.802423 | 5.649729e-49 | -8.615850e-47 |
| Msa1098270 | Msa1243100 | 0.807031 | 6.165326e-50 | -8.615850e-47 |
| Msa1105500 | Msa1243100 | 0.838271 | 3.176119e-57 | -8.615850e-47 |
| Msa0243250 | Msa1243100 | 0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0272730 | Msa1243100 | 0.839034 | 2.017099e-57 | -8.615850e-47 |
| Msa0285450 | Msa1243100 | 0.803777 | 2.965401e-49 | -8.615850e-47 |
| Msa0305190 | Msa1243100 | 0.828191 | 1.031449e-54 | -8.615850e-47 |
| Msa0308460 | Msa1243100 | 0.824026 | 1.008610e-53 | -8.615850e-47 |
| Msa0319170 | Msa1243100 | 0.805928 | 1.053336e-49 | -8.615850e-47 |
| Msa0340450 | Msa1243100 | 0.857517 | 1.546669e-62 | -8.615850e-47 |
| Msa0344690 | Msa1243100 | -0.841827 | 3.751391e-58 | -8.615850e-47 |
| Msa0350000 | Msa1243100 | 0.804775 | 1.837625e-49 | -8.615850e-47 |
| Msa0350320 | Msa1243100 | -0.843919 | 1.041744e-58 | -8.615850e-47 |
| Msa0354800 | Msa1243100 | -0.802613 | 5.163208e-49 | -8.615850e-47 |
| Msa1116130 | Msa1243100 | -0.824696 | 7.017192e-54 | -8.615850e-47 |
| Msa1118760 | Msa1243100 | 0.802891 | 4.523385e-49 | -8.615850e-47 |
| Msa1121450 | Msa1243100 | -0.829980 | 3.800037e-55 | -8.615850e-47 |
| Msa1124540 | Msa1243100 | -0.803312 | 3.702159e-49 | -8.615850e-47 |
| Msa1139000 | Msa1243100 | -0.833119 | 6.402398e-56 | -8.615850e-47 |
| Msa1144720 | Msa1243100 | -0.835701 | 1.439366e-56 | -8.615850e-47 |
| Msa1156340 | Msa1243100 | -0.807466 | 4.987023e-50 | -8.615850e-47 |
| Msa1162550 | Msa1243100 | -0.844312 | 8.171999e-59 | -8.615850e-47 |
| Msa1163590 | Msa1243100 | -0.811146 | 8.101885e-51 | -8.615850e-47 |
| Msa1166500 | Msa1243100 | -0.825022 | 5.877784e-54 | -8.615850e-47 |
| Msa1177780 | Msa1243100 | 0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa1178190 | Msa1243100 | 0.883017 | 6.404690e-71 | -8.615850e-47 |
| Msa1183100 | Msa1243100 | -0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa1185110 | Msa1243100 | 0.803032 | 4.229443e-49 | -8.615850e-47 |
| Msa1202770 | Msa1243100 | -0.823150 | 1.617515e-53 | -8.615850e-47 |
| Msa1205390 | Msa1243100 | 0.810390 | 1.180474e-50 | -8.615850e-47 |
| Msa1215890 | Msa1243100 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
| Msa1224480 | Msa1243100 | 0.829963 | 3.835125e-55 | -8.615850e-47 |
| Msa0485490 | Msa1243100 | 0.813540 | 2.430849e-51 | -8.615850e-47 |
| Msa0526070 | Msa1243100 | -0.854035 | 1.608836e-61 | -8.615850e-47 |
| Msa0530650 | Msa1243100 | 0.810263 | 1.257620e-50 | -8.615850e-47 |
| Msa0532810 | Msa1243100 | -0.833616 | 4.815395e-56 | -8.615850e-47 |
| Msa0553460 | Msa1243100 | 0.814571 | 1.439707e-51 | -8.615850e-47 |
| Msa0555020 | Msa1243100 | 0.808478 | 3.036177e-50 | -8.615850e-47 |
| Msa0558690 | Msa1243100 | 0.801045 | 1.083482e-48 | -8.615850e-47 |
| Msa0567020 | Msa1243100 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0574850 | Msa1243100 | 0.840905 | 6.559155e-58 | -8.615850e-47 |
| Msa0580000 | Msa1243100 | 0.842102 | 3.174135e-58 | -8.615850e-47 |
| Msa0587190 | Msa1243100 | 0.818029 | 2.425522e-52 | -8.615850e-47 |
| Msa0842650 | Msa1243100 | 0.801727 | 7.857190e-49 | -8.615850e-47 |
| Msa0844490 | Msa1243100 | 0.802789 | 4.749354e-49 | -8.615850e-47 |
| Msa0865510 | Msa1243100 | -0.806448 | 8.186320e-50 | -8.615850e-47 |
| Msa0870830 | Msa1243100 | 0.809043 | 2.299406e-50 | -8.615850e-47 |
| Msa0876360 | Msa1243100 | 0.802187 | 6.318283e-49 | -8.615850e-47 |
| Msa0930400 | Msa1243100 | -0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0931520 | Msa1243100 | 0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0949790 | Msa1243100 | 0.847347 | 1.225085e-59 | -8.615850e-47 |
| Msa0961490 | Msa1243100 | 0.810080 | 1.376615e-50 | -8.615850e-47 |
| Msa0969520 | Msa1243100 | 0.809377 | 1.950334e-50 | -8.615850e-47 |
| Msa0973600 | Msa1243100 | 0.811081 | 8.366370e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243100 | MtrunA17_Chr8g0348961 | 92.634 | 448 | 14 | 3 | 1 | 429 | 1 | 448 | 0.0 | 819 |
| Msa1243100 | MtrunA17_Chr1g0203061 | 64.206 | 447 | 138 | 6 | 1 | 426 | 1 | 446 | 0.0 | 576 |
| Msa1243100 | MtrunA17_Chr3g0110381 | 51.802 | 444 | 178 | 10 | 1 | 415 | 1 | 437 | 3.13e-155 | 446 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243100 | AT4G00500.1 | 63.252 | 449 | 141 | 7 | 1 | 426 | 1 | 448 | 0.0 | 559 |
| Msa1243100 | AT4G00500.2 | 63.252 | 449 | 141 | 7 | 1 | 426 | 1 | 448 | 0.0 | 559 |
| Msa1243100 | AT3G49050.1 | 57.505 | 473 | 155 | 7 | 1 | 427 | 1 | 473 | 0.0 | 550 |
| Msa1243100 | AT5G37710.1 | 51.121 | 446 | 181 | 7 | 1 | 424 | 1 | 431 | 3.83e-150 | 433 |
| Msa1243100 | AT5G37710.2 | 58.333 | 348 | 120 | 5 | 1 | 326 | 1 | 345 | 5.23e-138 | 399 |
Find 124 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTATATGTTGACGTTTA+TGG | 0.092686 | 8_2:+28156434 | Msa1243100:CDS |
| TGATAGAAAGAAATAATTTA+AGG | 0.167668 | 8_2:-28160843 | None:intergenic |
| GCATTATTTGCTATTAGTTT+TGG | 0.174137 | 8_2:+28160877 | Msa1243100:three_prime_UTR |
| GCTTCATAATCGCGACAAAT+TGG | 0.195008 | 8_2:+28156503 | Msa1243100:CDS |
| ATTGTAATTTAGAGCCTATT+TGG | 0.229749 | 8_2:+28160998 | Msa1243100:three_prime_UTR |
| ACTTATATGTTGACGTTTAT+GGG | 0.239710 | 8_2:+28156435 | Msa1243100:CDS |
| CATGGTGGATATGTTCATAA+TGG | 0.280337 | 8_2:+28156339 | Msa1243100:CDS |
| ATTGTGTCTCATGTGCTTAA+AGG | 0.289797 | 8_2:+28157908 | Msa1243100:CDS |
| CTATTTGGATTAAACTTCTT+AGG | 0.290416 | 8_2:+28161013 | Msa1243100:three_prime_UTR |
| ACTTGAGTGTGTTTATTGTC+TGG | 0.305050 | 8_2:+28155957 | Msa1243100:CDS |
| TTTCTTTCTATCAAGCTTCA+TGG | 0.309484 | 8_2:+28160853 | Msa1243100:three_prime_UTR |
| CTTCATAATCGCGACAAATT+GGG | 0.318156 | 8_2:+28156504 | Msa1243100:CDS |
| CTAAGAAGTTTAATCCAAAT+AGG | 0.326933 | 8_2:-28161012 | None:intergenic |
| CCGATGTATGTCTCTCAATT+TGG | 0.330984 | 8_2:+28156569 | Msa1243100:CDS |
| GAAGATTTCCACCCATTGTT+AGG | 0.336238 | 8_2:+28159429 | Msa1243100:CDS |
| ATGGGACATTCACTTGGTGC+TGG | 0.338920 | 8_2:+28156453 | Msa1243100:CDS |
| AGATCGGAATATGGAGATTC+CGG | 0.339282 | 8_2:+28160542 | Msa1243100:CDS |
| GCTAGAGAAAGATCGGAATA+TGG | 0.341114 | 8_2:+28160533 | Msa1243100:CDS |
| TTGTCGAGCGAAAGCCCTTC+AGG | 0.380817 | 8_2:+28158003 | Msa1243100:CDS |
| TTGTCTTGCGGAAGGATTAC+GGG | 0.385981 | 8_2:+28156172 | Msa1243100:CDS |
| ATGGTGGATATGTTCATAAT+GGG | 0.386158 | 8_2:+28156340 | Msa1243100:CDS |
| TGGGACATTCACTTGGTGCT+GGG | 0.386587 | 8_2:+28156454 | Msa1243100:CDS |
| CCTTCGGAGGGCAGTTGCTT+TGG | 0.387374 | 8_2:+28160629 | Msa1243100:CDS |
| GTTATGGCATTAATCCTGAT+TGG | 0.390744 | 8_2:+28156148 | Msa1243100:CDS |
| CTACTGACCATGCCATCCTT+TGG | 0.397629 | 8_2:+28159507 | Msa1243100:CDS |
| GTGCGACAAATTCGTGGTAT+AGG | 0.400706 | 8_2:-28156069 | None:intergenic |
| TTTAAGTATCAGCTTCTGTT+TGG | 0.405504 | 8_2:+28161089 | Msa1243100:three_prime_UTR |
| GCATACTCACCTTCCTCATA+TGG | 0.405824 | 8_2:+28160663 | Msa1243100:CDS |
| GTTATTGAAGGCAGCGGATT+GGG | 0.408048 | 8_2:+28156362 | Msa1243100:CDS |
| CTTGAGTGTGTTTATTGTCT+GGG | 0.413771 | 8_2:+28155958 | Msa1243100:CDS |
| ATTGTCTGGGTTGTACTCGT+TGG | 0.414145 | 8_2:+28155971 | Msa1243100:CDS |
| GAAATTATACTGGCTGTTAG+TGG | 0.416596 | 8_2:+28156249 | Msa1243100:CDS |
| TTCATGAAATGTTCCATATG+AGG | 0.417496 | 8_2:-28160676 | None:intergenic |
| ATATCATACTAAACTAAAAC+GGG | 0.420467 | 8_2:-28160935 | None:intergenic |
| TTGTCTGGGTTGTACTCGTT+GGG | 0.421207 | 8_2:+28155972 | Msa1243100:CDS |
| TGGGCTCCCGAAGGTGGTTA+TGG | 0.421491 | 8_2:+28156132 | Msa1243100:intron |
| CATTGATGTCATTTATCTGT+GGG | 0.426287 | 8_2:+28155926 | None:intergenic |
| TGGGTTGTACTCGTTGGGCT+TGG | 0.426664 | 8_2:+28155977 | Msa1243100:CDS |
| TTCACTTGGTGCTGGGGTGG+TGG | 0.432423 | 8_2:+28156461 | Msa1243100:CDS |
| ACCTCGGACAACCACTGCTC+TGG | 0.435017 | 8_2:+28156845 | Msa1243100:CDS |
| CTTGGACAAACGGAATTTCA+TGG | 0.437460 | 8_2:+28156321 | Msa1243100:CDS |
| TGATCGTTCGGAAATTATAC+TGG | 0.443999 | 8_2:+28156239 | Msa1243100:CDS |
| AGGCTACGAGAGTGAACATT+GGG | 0.444616 | 8_2:+28156020 | Msa1243100:CDS |
| CGTGGACGACACAGGTCATA+TGG | 0.445994 | 8_2:+28160803 | Msa1243100:CDS |
| AATATCATACTAAACTAAAA+CGG | 0.449029 | 8_2:-28160936 | None:intergenic |
| ATTGTCTTGCGGAAGGATTA+CGG | 0.453840 | 8_2:+28156171 | Msa1243100:CDS |
| CAATAAACACACTCAAGTAT+AGG | 0.464088 | 8_2:-28155952 | None:intergenic |
| CGGCTGCGCAAAAGATGGTT+AGG | 0.467966 | 8_2:+28160562 | Msa1243100:CDS |
| TTCATAATCGCGACAAATTG+GGG | 0.469907 | 8_2:+28156505 | Msa1243100:CDS |
| TGATAACAAGCTTGGACAAA+CGG | 0.478078 | 8_2:+28156311 | Msa1243100:CDS |
| GGGACATTCACTTGGTGCTG+GGG | 0.479013 | 8_2:+28156455 | Msa1243100:CDS |
| CAAACTCTTCTGCAGTAGCT+AGG | 0.481650 | 8_2:-28156044 | None:intergenic |
| ACATTCACTTGGTGCTGGGG+TGG | 0.482845 | 8_2:+28156458 | Msa1243100:CDS |
| GCTTACATCGAGAGCCCGTT+GGG | 0.485898 | 8_2:-28159543 | None:intergenic |
| ATAACAAACGATCAGAAAGT+TGG | 0.487511 | 8_2:+28160754 | Msa1243100:CDS |
| ATACCTTGATCATGATCGTT+CGG | 0.489378 | 8_2:+28156227 | Msa1243100:CDS |
| GGTTATTGAAGGCAGCGGAT+TGG | 0.493396 | 8_2:+28156361 | Msa1243100:CDS |
| ATAAACGTCAACATATAAGT+TGG | 0.494177 | 8_2:-28156432 | None:intergenic |
| TTCCGCAAGACAATCCAATC+AGG | 0.503167 | 8_2:-28156162 | None:intergenic |
| TGTTCATAATGGGTTATTGA+AGG | 0.504548 | 8_2:+28156350 | Msa1243100:CDS |
| GAAAGTTGGAATGAATTTGT+CGG | 0.506851 | 8_2:+28160768 | Msa1243100:CDS |
| GATTGAGAAGGAATCCCAAC+GGG | 0.509870 | 8_2:+28159529 | Msa1243100:CDS |
| AAGAGTACCGTGCAGCCCTT+CGG | 0.515446 | 8_2:+28160613 | Msa1243100:CDS |
| CCAGGTGCATACAGACGCCT+TGG | 0.522285 | 8_2:-28157966 | None:intergenic |
| ACGTTTATGGGACATTCACT+TGG | 0.533534 | 8_2:+28156447 | Msa1243100:CDS |
| GGTACTGCTGTCCTAACAAT+GGG | 0.534930 | 8_2:-28159440 | None:intergenic |
| TTTCCGAACGATCATGATCA+AGG | 0.536303 | 8_2:-28156230 | None:intergenic |
| ATTGATGCTGAGGAAGACTC+TGG | 0.541221 | 8_2:+28160699 | Msa1243100:CDS |
| AGCTTACATCGAGAGCCCGT+TGG | 0.546689 | 8_2:-28159544 | None:intergenic |
| GATCAACTCTATCGTACTAC+AGG | 0.548222 | 8_2:+28156611 | Msa1243100:CDS |
| AGTTAATGCTAGAGAAAGAT+CGG | 0.550817 | 8_2:+28160526 | Msa1243100:intron |
| CTGCCCTCCGAAGGGCTGCA+CGG | 0.552923 | 8_2:-28160620 | None:intergenic |
| CAGGTGCATACAGACGCCTT+GGG | 0.556377 | 8_2:-28157965 | None:intergenic |
| AGTACCGTGCAGCCCTTCGG+AGG | 0.557733 | 8_2:+28160616 | Msa1243100:CDS |
| AAGATTGTGCGACAAATTCG+TGG | 0.558185 | 8_2:-28156075 | None:intergenic |
| CATACATCGGGCAGGAGCAA+TGG | 0.558494 | 8_2:-28156556 | None:intergenic |
| TGATCAAGGTATATCATGTA+CGG | 0.559156 | 8_2:-28156216 | None:intergenic |
| GCATTGATGTCATTTATCTG+TGG | 0.559899 | 8_2:+28155925 | None:intergenic |
| TGATTGGATTGTCTTGCGGA+AGG | 0.561618 | 8_2:+28156164 | Msa1243100:CDS |
| TGCCATCCTTTGGATTGAGA+AGG | 0.562134 | 8_2:+28159517 | Msa1243100:CDS |
| GATTCCGGCTGCGCAAAAGA+TGG | 0.564056 | 8_2:+28160557 | Msa1243100:CDS |
| ATGCGGAATGGGAGGTTCTG+AGG | 0.566241 | 8_2:+28156391 | Msa1243100:intron |
| TGATCAAACCTTCCATCGAC+AGG | 0.566884 | 8_2:-28159461 | None:intergenic |
| CCAAAGCAACTGCCCTCCGA+AGG | 0.567097 | 8_2:-28160629 | None:intergenic |
| CCAAGGCGTCTGTATGCACC+TGG | 0.569450 | 8_2:+28157966 | Msa1243100:CDS |
| TAATGGGTTATTGAAGGCAG+CGG | 0.572333 | 8_2:+28156356 | Msa1243100:CDS |
| CTTAAAGGATACTTGCACAC+TGG | 0.573680 | 8_2:+28157923 | Msa1243100:CDS |
| ATTTCATGAAATTGATGCTG+AGG | 0.574640 | 8_2:+28160689 | Msa1243100:CDS |
| TTCCTTCTCAATCCAAAGGA+TGG | 0.575356 | 8_2:-28159519 | None:intergenic |
| ATCCTGATTGGATTGTCTTG+CGG | 0.575742 | 8_2:+28156160 | Msa1243100:CDS |
| GGGATTCCTTCTCAATCCAA+AGG | 0.576786 | 8_2:-28159523 | None:intergenic |
| TTGAGAGACATACATCGGGC+AGG | 0.577619 | 8_2:-28156564 | None:intergenic |
| CAAATTGAGAGACATACATC+GGG | 0.583019 | 8_2:-28156568 | None:intergenic |
| AGAATAAACTTCGAGACCCA+AGG | 0.585107 | 8_2:+28157949 | Msa1243100:CDS |
| GAGGAAGGTGAGTATGCTTG+AGG | 0.590075 | 8_2:-28160657 | None:intergenic |
| CAAAGCAACTGCCCTCCGAA+GGG | 0.592141 | 8_2:-28160628 | None:intergenic |
| AGGTACTGCTGTCCTAACAA+TGG | 0.595170 | 8_2:-28159441 | None:intergenic |
| TGATCGTTTGTTATGAGACA+AGG | 0.595396 | 8_2:-28160745 | None:intergenic |
| TGTCGGACGCATGTTTGACG+TGG | 0.597332 | 8_2:+28160785 | Msa1243100:CDS |
| GAAGACTCTGGAAGATCTAG+TGG | 0.597825 | 8_2:+28160711 | Msa1243100:CDS |
| TAGTGGACTCAATTTAGCAA+AGG | 0.598653 | 8_2:+28156266 | Msa1243100:CDS |
| TCTCAATCCAAAGGATGGCA+TGG | 0.607183 | 8_2:-28159514 | None:intergenic |
| CAGCAGTACCTGTCGATGGA+AGG | 0.608153 | 8_2:+28159453 | Msa1243100:CDS |
| TCCAGAGCAGTGGTTGTCCG+AGG | 0.612433 | 8_2:-28156846 | None:intergenic |
| TGAAATGTTCCATATGAGGA+AGG | 0.619523 | 8_2:-28160672 | None:intergenic |
| ACTGCTGTCCTAACAATGGG+TGG | 0.627208 | 8_2:-28159437 | None:intergenic |
| CACATGAGACACAATAAACA+AGG | 0.628531 | 8_2:-28157900 | None:intergenic |
| ATGTTTGACGTGGACGACAC+AGG | 0.631845 | 8_2:+28160795 | Msa1243100:CDS |
| CAGGCTACGAGAGTGAACAT+TGG | 0.632322 | 8_2:+28156019 | Msa1243100:CDS |
| GTAGACGCTTTCCAGAGCAG+TGG | 0.632377 | 8_2:-28156856 | None:intergenic |
| CCAAATTGAGAGACATACAT+CGG | 0.633196 | 8_2:-28156569 | None:intergenic |
| ACAATGTGATAGAGACGACC+AGG | 0.636901 | 8_2:-28157984 | None:intergenic |
| TGTACGGAGTAACACAACCT+TGG | 0.640364 | 8_2:-28156200 | None:intergenic |
| CAATTTGGCTGTAAGATATG+CGG | 0.643247 | 8_2:+28156584 | Msa1243100:CDS |
| AGGACAGCAGTACCTGTCGA+TGG | 0.651084 | 8_2:+28159449 | Msa1243100:CDS |
| GGATTGAGAAGGAATCCCAA+CGG | 0.658153 | 8_2:+28159528 | Msa1243100:CDS |
| TGTCTTGCGGAAGGATTACG+GGG | 0.660199 | 8_2:+28156173 | Msa1243100:CDS |
| AGCACCATACTGTACCTGAA+GGG | 0.668622 | 8_2:-28158017 | None:intergenic |
| AAGGATTACGGGGATAACCA+AGG | 0.692832 | 8_2:+28156183 | Msa1243100:CDS |
| GGTTCTGAGGAAGTTAATAG+CGG | 0.704402 | 8_2:+28156404 | Msa1243100:intron |
| GGACAAACGGAATTTCATGG+TGG | 0.722297 | 8_2:+28156324 | Msa1243100:CDS |
| TCTAAATTACAATATTCACA+TGG | 0.730026 | 8_2:-28160988 | None:intergenic |
| ATTGGGGATACAGAGAGACA+AGG | 0.732263 | 8_2:+28156521 | Msa1243100:CDS |
| GGCTACGAGAGTGAACATTG+GGG | 0.786513 | 8_2:+28156021 | Msa1243100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTAAAATTCATAATTT+TGG | - | chr8_2:28158147-28158166 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATCTAAAACAAA+CGG | - | chr8_2:28158269-28158288 | None:intergenic | 10.0% |
| !!! | TGTTTTAGATTTTAAAAAAA+TGG | + | chr8_2:28158271-28158290 | Msa1243100:intron | 10.0% |
| !!! | CTTTTTTTAAAAATAGATTA+TGG | - | chr8_2:28158685-28158704 | None:intergenic | 10.0% |
| !! | ATATTATATACAACTAATAA+AGG | - | chr8_2:28159162-28159181 | None:intergenic | 10.0% |
| !! | AGTAAGTTTATAATAACAAA+AGG | - | chr8_2:28156648-28156667 | None:intergenic | 15.0% |
| !! | ATATAAAAAATACATTCAGT+AGG | - | chr8_2:28157368-28157387 | None:intergenic | 15.0% |
| !! | TTTAATTAAAGTGACATTAA+TGG | + | chr8_2:28157582-28157601 | Msa1243100:intron | 15.0% |
| !!! | TTTTAAAATCTAAAACAAAC+GGG | - | chr8_2:28158268-28158287 | None:intergenic | 15.0% |
| !!! | TTCCTTTGTATTTTTAAAAA+TGG | + | chr8_2:28158297-28158316 | Msa1243100:intron | 15.0% |
| !!! | ATCCATTTTTAAAAATACAA+AGG | - | chr8_2:28158302-28158321 | None:intergenic | 15.0% |
| !!! | AAATTTTGTGATTTTTACTA+TGG | - | chr8_2:28158435-28158454 | None:intergenic | 15.0% |
| !!! | TTTAAGATAAACTATTCAAA+CGG | + | chr8_2:28158590-28158609 | Msa1243100:intron | 15.0% |
| !!! | TTTTAACAAAGAAATTTTCA+AGG | - | chr8_2:28158635-28158654 | None:intergenic | 15.0% |
| !! | TACTCTTGTAAAAATAAAAA+TGG | + | chr8_2:28159110-28159129 | Msa1243100:intron | 15.0% |
| !! | ACTCTTGTAAAAATAAAAAT+GGG | + | chr8_2:28159111-28159130 | Msa1243100:intron | 15.0% |
| !! | AAAAAAAAAAAACACAACAA+GGG | - | chr8_2:28159943-28159962 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACACAACA+AGG | - | chr8_2:28159944-28159963 | None:intergenic | 15.0% |
| !! | AATTTAGACAACAATTTATA+TGG | - | chr8_2:28160356-28160375 | None:intergenic | 15.0% |
| !! | AAATAATAATTAAAACCTTG+AGG | - | chr8_2:28160468-28160487 | None:intergenic | 15.0% |
| !! | TGATAGAAAGAAATAATTTA+AGG | - | chr8_2:28160846-28160865 | None:intergenic | 15.0% |
| !! | AATATCATACTAAACTAAAA+CGG | - | chr8_2:28160939-28160958 | None:intergenic | 15.0% |
| !! | AAATTAATTGTTGATGTCTT+CGG | - | chr8_2:28156945-28156964 | None:intergenic | 20.0% |
| !! | AGTTCAGTTGAAATATATAA+TGG | + | chr8_2:28157173-28157192 | Msa1243100:intron | 20.0% |
| !! | GTTCAGTTGAAATATATAAT+GGG | + | chr8_2:28157174-28157193 | Msa1243100:intron | 20.0% |
| !! | AGATGCAAATTAATGAATAA+TGG | - | chr8_2:28157439-28157458 | None:intergenic | 20.0% |
| !!! | ATATGATATTCTTTTTTCCT+CGG | + | chr8_2:28157474-28157493 | Msa1243100:intron | 20.0% |
| !!! | AATTTTTCATGAATATGCAT+TGG | + | chr8_2:28157748-28157767 | Msa1243100:intron | 20.0% |
| !! | ATGAAAGAAATAACAATGTT+TGG | - | chr8_2:28157810-28157829 | None:intergenic | 20.0% |
| !!! | AAACATTGTTATTTCTTTCA+TGG | + | chr8_2:28157809-28157828 | Msa1243100:intron | 20.0% |
| !!! | TATAATAAGTTTTGGTCATT+TGG | + | chr8_2:28158813-28158832 | Msa1243100:intron | 20.0% |
| !! | ACGCATTGAATTTAATAATT+TGG | - | chr8_2:28159352-28159371 | None:intergenic | 20.0% |
| !! | TAGTTAATATGTTAACTGAA+TGG | + | chr8_2:28160078-28160097 | Msa1243100:intron | 20.0% |
| !!! | CATTATTTGCTATTAGTTTT+GGG | + | chr8_2:28160878-28160897 | Msa1243100:three_prime_UTR | 20.0% |
| !! | ATATCATACTAAACTAAAAC+GGG | - | chr8_2:28160938-28160957 | None:intergenic | 20.0% |
| !! | TCTAAATTACAATATTCACA+TGG | - | chr8_2:28160991-28161010 | None:intergenic | 20.0% |
| ! | ATAAACGTCAACATATAAGT+TGG | - | chr8_2:28156435-28156454 | None:intergenic | 25.0% |
| ! | AACTTATATGTTGACGTTTA+TGG | + | chr8_2:28156434-28156453 | Msa1243100:CDS | 25.0% |
| ! | ACTTATATGTTGACGTTTAT+GGG | + | chr8_2:28156435-28156454 | Msa1243100:CDS | 25.0% |
| ! | TTGATAGATAAGAAATCATG+AGG | - | chr8_2:28156760-28156779 | None:intergenic | 25.0% |
| ! | AGAATATCATATTAACCAGT+TGG | - | chr8_2:28157466-28157485 | None:intergenic | 25.0% |
| ! | CTAAAATCTGTGAATAAATC+AGG | - | chr8_2:28157513-28157532 | None:intergenic | 25.0% |
| !! | CTGATTTATTCACAGATTTT+AGG | + | chr8_2:28157511-28157530 | Msa1243100:intron | 25.0% |
| !!! | AGATTTTAGGATTTGTTGAA+TGG | + | chr8_2:28157524-28157543 | Msa1243100:intron | 25.0% |
| !! | ATTGAAAATCTTATTTCCTG+TGG | - | chr8_2:28157731-28157750 | None:intergenic | 25.0% |
| ! | TCTTTGTAACTTTCTAATCA+TGG | + | chr8_2:28158176-28158195 | Msa1243100:intron | 25.0% |
| ! | TAAGAAGAGTCAATTAATTG+CGG | + | chr8_2:28158206-28158225 | Msa1243100:intron | 25.0% |
| ! | AACATGATGAATTTGATCTA+AGG | + | chr8_2:28158232-28158251 | Msa1243100:intron | 25.0% |
| ! | ACATGATGAATTTGATCTAA+GGG | + | chr8_2:28158233-28158252 | Msa1243100:intron | 25.0% |
| ! | TAACCAAATGATGAAATACT+TGG | + | chr8_2:28158559-28158578 | Msa1243100:intron | 25.0% |
| ! | ATTCCAAGTATTTCATCATT+TGG | - | chr8_2:28158565-28158584 | None:intergenic | 25.0% |
| ! | ATTCTCATTCATAATCTGAA+AGG | + | chr8_2:28158745-28158764 | Msa1243100:intron | 25.0% |
| !!! | TGATTTTTTTCTTCTCAAGT+TGG | + | chr8_2:28158843-28158862 | Msa1243100:intron | 25.0% |
| ! | CACATCAACACAAAATAATT+TGG | + | chr8_2:28158977-28158996 | Msa1243100:intron | 25.0% |
| !! | AACCTTATACAACTTTTCTA+TGG | - | chr8_2:28159138-28159157 | None:intergenic | 25.0% |
| ! | ATTGTTCATAATAGAACAAC+TGG | + | chr8_2:28159199-28159218 | Msa1243100:intron | 25.0% |
| ! | AAGTTTACCTCACTAAATTA+CGG | + | chr8_2:28159278-28159297 | Msa1243100:intron | 25.0% |
| !!! | CTTAATTCATTTTGAAACTC+TGG | + | chr8_2:28159640-28159659 | Msa1243100:intron | 25.0% |
| ! | AAGTTCAAACCAATATTTGT+TGG | + | chr8_2:28159685-28159704 | Msa1243100:intron | 25.0% |
| !!! | CCTTATTTTCCAACAAATAT+TGG | - | chr8_2:28159697-28159716 | None:intergenic | 25.0% |
| !! | CCAATATTTGTTGGAAAATA+AGG | + | chr8_2:28159694-28159713 | Msa1243100:intron | 25.0% |
| ! | ATATCTCTACAAATAGAAAC+TGG | - | chr8_2:28159789-28159808 | None:intergenic | 25.0% |
| ! | GTTAATGCAGTTTAAATACA+TGG | - | chr8_2:28160334-28160353 | None:intergenic | 25.0% |
| !!! | GCATTATTTGCTATTAGTTT+TGG | + | chr8_2:28160877-28160896 | Msa1243100:three_prime_UTR | 25.0% |
| !! | ATTGTAATTTAGAGCCTATT+TGG | + | chr8_2:28160998-28161017 | Msa1243100:three_prime_UTR | 25.0% |
| ! | CTAAGAAGTTTAATCCAAAT+AGG | - | chr8_2:28161015-28161034 | None:intergenic | 25.0% |
| ! | CTATTTGGATTAAACTTCTT+AGG | + | chr8_2:28161013-28161032 | Msa1243100:three_prime_UTR | 25.0% |
| CAATAAACACACTCAAGTAT+AGG | - | chr8_2:28155955-28155974 | None:intergenic | 30.0% | |
| AAAAAATGTCTATACTCTGC+AGG | + | chr8_2:28156000-28156019 | Msa1243100:CDS | 30.0% | |
| TGATCAAGGTATATCATGTA+CGG | - | chr8_2:28156219-28156238 | None:intergenic | 30.0% | |
| !! | ATGGTGGATATGTTCATAAT+GGG | + | chr8_2:28156340-28156359 | Msa1243100:CDS | 30.0% |
| !! | TGTTCATAATGGGTTATTGA+AGG | + | chr8_2:28156350-28156369 | Msa1243100:CDS | 30.0% |
| CAATAAAACTGAACTGAAGT+CGG | - | chr8_2:28156910-28156929 | None:intergenic | 30.0% | |
| TTCATGCTTCAAATCCAAAA+GGG | + | chr8_2:28157208-28157227 | Msa1243100:intron | 30.0% | |
| AGCTTAAAGCTGTTAAGTTT+AGG | - | chr8_2:28157276-28157295 | None:intergenic | 30.0% | |
| GTTCAGCTGATATGATAAAT+AGG | - | chr8_2:28157392-28157411 | None:intergenic | 30.0% | |
| ! | CTGTGAATAAATCAGGTTTT+CGG | - | chr8_2:28157506-28157525 | None:intergenic | 30.0% |
| ! | TCATTTTACAAGTGTCTCAA+AGG | + | chr8_2:28157605-28157624 | Msa1243100:intron | 30.0% |
| ! | CATTTTACAAGTGTCTCAAA+GGG | + | chr8_2:28157606-28157625 | Msa1243100:intron | 30.0% |
| ! | ATTTTACAAGTGTCTCAAAG+GGG | + | chr8_2:28157607-28157626 | Msa1243100:intron | 30.0% |
| ! | TAAATTCAGCTTTTGCCATT+AGG | + | chr8_2:28157777-28157796 | Msa1243100:intron | 30.0% |
| TTTCTTTCATGGTTATGCAT+TGG | + | chr8_2:28157820-28157839 | Msa1243100:intron | 30.0% | |
| CATGATGAATTTGATCTAAG+GGG | + | chr8_2:28158234-28158253 | Msa1243100:intron | 30.0% | |
| ! | AATTTGATCTAAGGGGATTT+TGG | + | chr8_2:28158241-28158260 | Msa1243100:intron | 30.0% |
| ! | ATTTGATCTAAGGGGATTTT+GGG | + | chr8_2:28158242-28158261 | Msa1243100:intron | 30.0% |
| CTTGAGAAGAAAAAAATCAC+AGG | - | chr8_2:28158842-28158861 | None:intergenic | 30.0% | |
| TTGAATGTAACTACATGTGT+CGG | + | chr8_2:28159013-28159032 | Msa1243100:intron | 30.0% | |
| ! | TTCAATTTGAAGTGTCAATG+CGG | + | chr8_2:28159078-28159097 | Msa1243100:intron | 30.0% |
| GTCCATAGAAAAGTTGTATA+AGG | + | chr8_2:28159133-28159152 | Msa1243100:intron | 30.0% | |
| ! | TTTTACCAAAACAGTAGACA+TGG | + | chr8_2:28159594-28159613 | Msa1243100:intron | 30.0% |
| TTTACTGCAACATTTAAGTG+TGG | - | chr8_2:28159867-28159886 | None:intergenic | 30.0% | |
| TTTAGACATCTGCAAAATCA+TGG | - | chr8_2:28160159-28160178 | None:intergenic | 30.0% | |
| AGTTAATGCTAGAGAAAGAT+CGG | + | chr8_2:28160526-28160545 | Msa1243100:intron | 30.0% | |
| TTCATGAAATGTTCCATATG+AGG | - | chr8_2:28160679-28160698 | None:intergenic | 30.0% | |
| ATTTCATGAAATTGATGCTG+AGG | + | chr8_2:28160689-28160708 | Msa1243100:CDS | 30.0% | |
| ATAACAAACGATCAGAAAGT+TGG | + | chr8_2:28160754-28160773 | Msa1243100:CDS | 30.0% | |
| GAAAGTTGGAATGAATTTGT+CGG | + | chr8_2:28160768-28160787 | Msa1243100:CDS | 30.0% | |
| TTTCTTTCTATCAAGCTTCA+TGG | + | chr8_2:28160853-28160872 | Msa1243100:three_prime_UTR | 30.0% | |
| ACTTGAGTGTGTTTATTGTC+TGG | + | chr8_2:28155957-28155976 | Msa1243100:CDS | 35.0% | |
| CTTGAGTGTGTTTATTGTCT+GGG | + | chr8_2:28155958-28155977 | Msa1243100:CDS | 35.0% | |
| ATTAATGCCATAACCACCTT+CGG | - | chr8_2:28156142-28156161 | None:intergenic | 35.0% | |
| GTTATGGCATTAATCCTGAT+TGG | + | chr8_2:28156148-28156167 | Msa1243100:CDS | 35.0% | |
| ATACCTTGATCATGATCGTT+CGG | + | chr8_2:28156227-28156246 | Msa1243100:CDS | 35.0% | |
| TGATCGTTCGGAAATTATAC+TGG | + | chr8_2:28156239-28156258 | Msa1243100:CDS | 35.0% | |
| ! | GAAATTATACTGGCTGTTAG+TGG | + | chr8_2:28156249-28156268 | Msa1243100:CDS | 35.0% |
| !! | TAGTGGACTCAATTTAGCAA+AGG | + | chr8_2:28156266-28156285 | Msa1243100:CDS | 35.0% |
| !! | GTTTTGCTTGATAACAAGCT+TGG | + | chr8_2:28156303-28156322 | Msa1243100:CDS | 35.0% |
| TGATAACAAGCTTGGACAAA+CGG | + | chr8_2:28156311-28156330 | Msa1243100:CDS | 35.0% | |
| !! | CATGGTGGATATGTTCATAA+TGG | + | chr8_2:28156339-28156358 | Msa1243100:CDS | 35.0% |
| CTTCATAATCGCGACAAATT+GGG | + | chr8_2:28156504-28156523 | Msa1243100:CDS | 35.0% | |
| TTCATAATCGCGACAAATTG+GGG | + | chr8_2:28156505-28156524 | Msa1243100:CDS | 35.0% | |
| CAAATTGAGAGACATACATC+GGG | - | chr8_2:28156571-28156590 | None:intergenic | 35.0% | |
| CCAAATTGAGAGACATACAT+CGG | - | chr8_2:28156572-28156591 | None:intergenic | 35.0% | |
| CAATTTGGCTGTAAGATATG+CGG | + | chr8_2:28156584-28156603 | Msa1243100:CDS | 35.0% | |
| AGAACCTAACCATAAAAGAG+AGG | + | chr8_2:28156732-28156751 | Msa1243100:intron | 35.0% | |
| GAACCTAACCATAAAAGAGA+GGG | + | chr8_2:28156733-28156752 | Msa1243100:intron | 35.0% | |
| !! | ACTTGTTTTTCTTCCTAAGC+AGG | + | chr8_2:28156812-28156831 | Msa1243100:intron | 35.0% |
| CTTAGTTTAACTACGCTCAA+GGG | - | chr8_2:28157155-28157174 | None:intergenic | 35.0% | |
| ACTTAGTTTAACTACGCTCA+AGG | - | chr8_2:28157156-28157175 | None:intergenic | 35.0% | |
| TTGAAGCATGAACTAAGTGT+AGG | - | chr8_2:28157200-28157219 | None:intergenic | 35.0% | |
| GTTCATGCTTCAAATCCAAA+AGG | + | chr8_2:28157207-28157226 | Msa1243100:intron | 35.0% | |
| AAAAGGGATTGTACTTGACA+GGG | + | chr8_2:28157224-28157243 | Msa1243100:intron | 35.0% | |
| AAGTAAGTAGTGACTGATAG+AGG | - | chr8_2:28157331-28157350 | None:intergenic | 35.0% | |
| AATTTGCATCTGATTCCAAC+TGG | + | chr8_2:28157448-28157467 | Msa1243100:intron | 35.0% | |
| TAAGTGATAAGAGCTTAACC+TGG | - | chr8_2:28157667-28157686 | None:intergenic | 35.0% | |
| CACATGAGACACAATAAACA+AGG | - | chr8_2:28157903-28157922 | None:intergenic | 35.0% | |
| ATTGTGTCTCATGTGCTTAA+AGG | + | chr8_2:28157908-28157927 | Msa1243100:CDS | 35.0% | |
| TCGTCTTTGTTAGTTCAGTA+AGG | - | chr8_2:28158092-28158111 | None:intergenic | 35.0% | |
| TGGATTACATAATGACCACA+AGG | - | chr8_2:28158127-28158146 | None:intergenic | 35.0% | |
| ATATCGTGTAAATTCTGCTC+AGG | + | chr8_2:28158707-28158726 | Msa1243100:intron | 35.0% | |
| ! | TTCCAAACCCAATCATTTTG+TGG | + | chr8_2:28158899-28158918 | Msa1243100:intron | 35.0% |
| ! | TCCAAACCCAATCATTTTGT+GGG | + | chr8_2:28158900-28158919 | Msa1243100:intron | 35.0% |
| ! | AAAGTGCCAGTTATGAAACA+CGG | + | chr8_2:28158936-28158955 | Msa1243100:intron | 35.0% |
| CATCAAACCGTAATTTAGTG+AGG | - | chr8_2:28159288-28159307 | None:intergenic | 35.0% | |
| !! | TGCAGCAGTAATTTCTAGTT+TGG | + | chr8_2:28159387-28159406 | Msa1243100:intron | 35.0% |
| AAGTTTACACCTGAAAATCG+TGG | + | chr8_2:28160213-28160232 | Msa1243100:intron | 35.0% | |
| ! | GTGGTTGATGTTCAAAATCA+TGG | + | chr8_2:28160232-28160251 | Msa1243100:intron | 35.0% |
| GGTTAATTGTGTTCAGTTGA+TGG | + | chr8_2:28160253-28160272 | Msa1243100:intron | 35.0% | |
| ACATGGTTAATCATGTTCAG+TGG | - | chr8_2:28160317-28160336 | None:intergenic | 35.0% | |
| GTTGAATTCTTTCTACCTCA+AGG | + | chr8_2:28160450-28160469 | Msa1243100:intron | 35.0% | |
| TGAAATGTTCCATATGAGGA+AGG | - | chr8_2:28160675-28160694 | None:intergenic | 35.0% | |
| !! | TGATCGTTTGTTATGAGACA+AGG | - | chr8_2:28160748-28160767 | None:intergenic | 35.0% |
| !!! | TTGCTATTAGTTTTGGGTCA+AGG | + | chr8_2:28160884-28160903 | Msa1243100:three_prime_UTR | 35.0% |
| !!! | TGCTATTAGTTTTGGGTCAA+GGG | + | chr8_2:28160885-28160904 | Msa1243100:three_prime_UTR | 35.0% |
| !!! | TTGTGATGCTCATTTTAGCT+TGG | + | chr8_2:28160962-28160981 | Msa1243100:three_prime_UTR | 35.0% |
| AAGATTGTGCGACAAATTCG+TGG | - | chr8_2:28156078-28156097 | None:intergenic | 40.0% | |
| ATGATATACGTAACCCTCAG+TGG | + | chr8_2:28156112-28156131 | Msa1243100:intron | 40.0% | |
| TGATATACGTAACCCTCAGT+GGG | + | chr8_2:28156113-28156132 | Msa1243100:intron | 40.0% | |
| TTAATGCCATAACCACCTTC+GGG | - | chr8_2:28156141-28156160 | None:intergenic | 40.0% | |
| ATCCTGATTGGATTGTCTTG+CGG | + | chr8_2:28156160-28156179 | Msa1243100:CDS | 40.0% | |
| ATTGTCTTGCGGAAGGATTA+CGG | + | chr8_2:28156171-28156190 | Msa1243100:CDS | 40.0% | |
| TTTCCGAACGATCATGATCA+AGG | - | chr8_2:28156233-28156252 | None:intergenic | 40.0% | |
| CTTGGACAAACGGAATTTCA+TGG | + | chr8_2:28156321-28156340 | Msa1243100:CDS | 40.0% | |
| !! | TAATGGGTTATTGAAGGCAG+CGG | + | chr8_2:28156356-28156375 | Msa1243100:CDS | 40.0% |
| ! | ATTGGGTTTTTGATGCGGAA+TGG | + | chr8_2:28156379-28156398 | Msa1243100:intron | 40.0% |
| ! | TTGGGTTTTTGATGCGGAAT+GGG | + | chr8_2:28156380-28156399 | Msa1243100:intron | 40.0% |
| !! | GGTTCTGAGGAAGTTAATAG+CGG | + | chr8_2:28156404-28156423 | Msa1243100:intron | 40.0% |
| ACGTTTATGGGACATTCACT+TGG | + | chr8_2:28156447-28156466 | Msa1243100:CDS | 40.0% | |
| GCTTCATAATCGCGACAAAT+TGG | + | chr8_2:28156503-28156522 | Msa1243100:CDS | 40.0% | |
| CCGATGTATGTCTCTCAATT+TGG | + | chr8_2:28156569-28156588 | Msa1243100:CDS | 40.0% | |
| GATCAACTCTATCGTACTAC+AGG | + | chr8_2:28156611-28156630 | Msa1243100:CDS | 40.0% | |
| AACTCTATCGTACTACAGGT+CGG | + | chr8_2:28156615-28156634 | Msa1243100:intron | 40.0% | |
| GGTAAAAAATCGTCCTGCTT+AGG | - | chr8_2:28156828-28156847 | None:intergenic | 40.0% | |
| !!! | AGCAGGACGATTTTTTACCT+CGG | + | chr8_2:28156829-28156848 | Msa1243100:intron | 40.0% |
| GTTATCAAATTGTCGCATGG+TGG | + | chr8_2:28157061-28157080 | Msa1243100:intron | 40.0% | |
| ! | CTGTCAAGTACAATCCCTTT+TGG | - | chr8_2:28157225-28157244 | None:intergenic | 40.0% |
| CAAAAGGGATTGTACTTGAC+AGG | + | chr8_2:28157223-28157242 | Msa1243100:intron | 40.0% | |
| TGTCAGAGACAGAAGTCATA+AGG | + | chr8_2:28157250-28157269 | Msa1243100:intron | 40.0% | |
| ! | GAGGATTAGATGTGTCATTG+AGG | - | chr8_2:28157312-28157331 | None:intergenic | 40.0% |
| TATCAGCTGAACACTTCTCT+TGG | + | chr8_2:28157400-28157419 | Msa1243100:intron | 40.0% | |
| !! | AGGATTTGTTGAATGGAGTG+TGG | + | chr8_2:28157531-28157550 | Msa1243100:intron | 40.0% |
| TCATACTGTCCACAACATGT+CGG | - | chr8_2:28157691-28157710 | None:intergenic | 40.0% | |
| GAGTTCACAATTCTAACCAC+AGG | + | chr8_2:28157712-28157731 | Msa1243100:intron | 40.0% | |
| ! | ATGTTTGGAGCTCATCCTAA+TGG | - | chr8_2:28157795-28157814 | None:intergenic | 40.0% |
| !! | CAGTGGTTGTTTTCCTTTCT+TGG | + | chr8_2:28157870-28157889 | Msa1243100:intron | 40.0% |
| ! | TGTTTTCCTTTCTTGGCAGT+TGG | + | chr8_2:28157877-28157896 | Msa1243100:intron | 40.0% |
| CTTAAAGGATACTTGCACAC+TGG | + | chr8_2:28157923-28157942 | Msa1243100:CDS | 40.0% | |
| AGAATAAACTTCGAGACCCA+AGG | + | chr8_2:28157949-28157968 | Msa1243100:CDS | 40.0% | |
| ! | TAGTTCAGTAAGGCGTCATA+TGG | - | chr8_2:28158082-28158101 | None:intergenic | 40.0% |
| GAAGAGTCAATTAATTGCGG+AGG | + | chr8_2:28158209-28158228 | Msa1243100:intron | 40.0% | |
| TGAAAGGTTTACACAGCTGT+AGG | + | chr8_2:28158761-28158780 | Msa1243100:intron | 40.0% | |
| ! | CCAAACCCAATCATTTTGTG+GGG | + | chr8_2:28158901-28158920 | Msa1243100:intron | 40.0% |
| TTGTGTCCGTGTTTCATAAC+TGG | - | chr8_2:28158945-28158964 | None:intergenic | 40.0% | |
| AATCTTCCTAACCTGCAATC+AGG | - | chr8_2:28159416-28159435 | None:intergenic | 40.0% | |
| GAAGATTTCCACCCATTGTT+AGG | + | chr8_2:28159429-28159448 | Msa1243100:CDS | 40.0% | |
| TTCCTTCTCAATCCAAAGGA+TGG | - | chr8_2:28159522-28159541 | None:intergenic | 40.0% | |
| ! | GTATGCCATGTCTACTGTTT+TGG | - | chr8_2:28159602-28159621 | None:intergenic | 40.0% |
| ! | ATCGGTGTTCACTAAAGGTT+GGG | - | chr8_2:28159907-28159926 | None:intergenic | 40.0% |
| !! | AAGGGTTAGTCATCACTCAT+CGG | - | chr8_2:28159925-28159944 | None:intergenic | 40.0% |
| GTAAACTTGAGCACAAACTG+TGG | - | chr8_2:28160201-28160220 | None:intergenic | 40.0% | |
| ! | GAACATCAACCACGATTTTC+AGG | - | chr8_2:28160225-28160244 | None:intergenic | 40.0% |
| ! | GCTGATTCATCGATACAACA+GGG | - | chr8_2:28160295-28160314 | None:intergenic | 40.0% |
| GCTAGAGAAAGATCGGAATA+TGG | + | chr8_2:28160533-28160552 | Msa1243100:CDS | 40.0% | |
| AGATCGGAATATGGAGATTC+CGG | + | chr8_2:28160542-28160561 | Msa1243100:CDS | 40.0% | |
| ATTGTCTGGGTTGTACTCGT+TGG | + | chr8_2:28155971-28155990 | Msa1243100:CDS | 45.0% | |
| TTGTCTGGGTTGTACTCGTT+GGG | + | chr8_2:28155972-28155991 | Msa1243100:CDS | 45.0% | |
| AGGCTACGAGAGTGAACATT+GGG | + | chr8_2:28156020-28156039 | Msa1243100:CDS | 45.0% | |
| CAAACTCTTCTGCAGTAGCT+AGG | - | chr8_2:28156047-28156066 | None:intergenic | 45.0% | |
| GTGCGACAAATTCGTGGTAT+AGG | - | chr8_2:28156072-28156091 | None:intergenic | 45.0% | |
| TTCCGCAAGACAATCCAATC+AGG | - | chr8_2:28156165-28156184 | None:intergenic | 45.0% | |
| TGATTGGATTGTCTTGCGGA+AGG | + | chr8_2:28156164-28156183 | Msa1243100:CDS | 45.0% | |
| TTGTCTTGCGGAAGGATTAC+GGG | + | chr8_2:28156172-28156191 | Msa1243100:CDS | 45.0% | |
| AAGGATTACGGGGATAACCA+AGG | + | chr8_2:28156183-28156202 | Msa1243100:CDS | 45.0% | |
| TGTACGGAGTAACACAACCT+TGG | - | chr8_2:28156203-28156222 | None:intergenic | 45.0% | |
| GGACAAACGGAATTTCATGG+TGG | + | chr8_2:28156324-28156343 | Msa1243100:CDS | 45.0% | |
| ! | GTTATTGAAGGCAGCGGATT+GGG | + | chr8_2:28156362-28156381 | Msa1243100:CDS | 45.0% |
| !!! | AGCGGATTGGGTTTTTGATG+CGG | + | chr8_2:28156374-28156393 | Msa1243100:intron | 45.0% |
| ATTGGGGATACAGAGAGACA+AGG | + | chr8_2:28156521-28156540 | Msa1243100:CDS | 45.0% | |
| ! | GGTCCCTCTCTTTTATGGTT+AGG | - | chr8_2:28156739-28156758 | None:intergenic | 45.0% |
| ! | CATGAGGTCCCTCTCTTTTA+TGG | - | chr8_2:28156744-28156763 | None:intergenic | 45.0% |
| !!! | GCGTCTACAAGTCACTTTTG+TGG | + | chr8_2:28156871-28156890 | Msa1243100:intron | 45.0% |
| ATGTTGCCTCTCTACTCAGA+TGG | - | chr8_2:28156975-28156994 | None:intergenic | 45.0% | |
| CGCGTTATCAAATTGTCGCA+TGG | + | chr8_2:28157058-28157077 | Msa1243100:intron | 45.0% | |
| TACCAGCCACCATAGGTATT+AGG | + | chr8_2:28157121-28157140 | Msa1243100:intron | 45.0% | |
| TTGCAGCCTAATACCTATGG+TGG | - | chr8_2:28157130-28157149 | None:intergenic | 45.0% | |
| GTGTTGCAGCCTAATACCTA+TGG | - | chr8_2:28157133-28157152 | None:intergenic | 45.0% | |
| ATTTGAGCTCTGTTCCCTTG+AGG | + | chr8_2:28157638-28157657 | Msa1243100:intron | 45.0% | |
| GCTTAACCTGGTAACCTCAA+GGG | - | chr8_2:28157655-28157674 | None:intergenic | 45.0% | |
| AGCTTAACCTGGTAACCTCA+AGG | - | chr8_2:28157656-28157675 | None:intergenic | 45.0% | |
| ATCACTTAGCCGACATGTTG+TGG | + | chr8_2:28157679-28157698 | Msa1243100:intron | 45.0% | |
| ! | TCCAGCTTTATGAGCTACAG+TGG | + | chr8_2:28157853-28157872 | Msa1243100:intron | 45.0% |
| ACCACTGTAGCTCATAAAGC+TGG | - | chr8_2:28157857-28157876 | None:intergenic | 45.0% | |
| ACAATGTGATAGAGACGACC+AGG | - | chr8_2:28157987-28158006 | None:intergenic | 45.0% | |
| AAAGCCCTTCAGGTACAGTA+TGG | + | chr8_2:28158013-28158032 | Msa1243100:intron | 45.0% | |
| AGCACCATACTGTACCTGAA+GGG | - | chr8_2:28158020-28158039 | None:intergenic | 45.0% | |
| CGATCTTCTGATAGTCCTTG+TGG | + | chr8_2:28158109-28158128 | Msa1243100:intron | 45.0% | |
| TCGTGTAAATTCTGCTCAGG+AGG | + | chr8_2:28158710-28158729 | Msa1243100:intron | 45.0% | |
| CCCCACAAAATGATTGGGTT+TGG | - | chr8_2:28158904-28158923 | None:intergenic | 45.0% | |
| CAGGTCCCCACAAAATGATT+GGG | - | chr8_2:28158909-28158928 | None:intergenic | 45.0% | |
| AACTGGCACTTTGTTGAAGC+AGG | - | chr8_2:28158928-28158947 | None:intergenic | 45.0% | |
| ! | TACATGTGTCGGTGTCTTGT+TGG | + | chr8_2:28159024-28159043 | Msa1243100:intron | 45.0% |
| ACAACTGTACGTGTCAGACA+CGG | + | chr8_2:28159047-28159066 | Msa1243100:intron | 45.0% | |
| ! | TAGTTTGGCTTCCTGATTGC+AGG | + | chr8_2:28159402-28159421 | Msa1243100:intron | 45.0% |
| GGTACTGCTGTCCTAACAAT+GGG | - | chr8_2:28159443-28159462 | None:intergenic | 45.0% | |
| ! | AGGTACTGCTGTCCTAACAA+TGG | - | chr8_2:28159444-28159463 | None:intergenic | 45.0% |
| TGATCAAACCTTCCATCGAC+AGG | - | chr8_2:28159464-28159483 | None:intergenic | 45.0% | |
| TCTCAATCCAAAGGATGGCA+TGG | - | chr8_2:28159517-28159536 | None:intergenic | 45.0% | |
| TGCCATCCTTTGGATTGAGA+AGG | + | chr8_2:28159517-28159536 | Msa1243100:CDS | 45.0% | |
| GGGATTCCTTCTCAATCCAA+AGG | - | chr8_2:28159526-28159545 | None:intergenic | 45.0% | |
| GGATTGAGAAGGAATCCCAA+CGG | + | chr8_2:28159528-28159547 | Msa1243100:CDS | 45.0% | |
| GATTGAGAAGGAATCCCAAC+GGG | + | chr8_2:28159529-28159548 | Msa1243100:CDS | 45.0% | |
| ! | TCGGTGTTCACTAAAGGTTG+GGG | - | chr8_2:28159906-28159925 | None:intergenic | 45.0% |
| ! | CATCGGTGTTCACTAAAGGT+TGG | - | chr8_2:28159908-28159927 | None:intergenic | 45.0% |
| ! | CACTCATCGGTGTTCACTAA+AGG | - | chr8_2:28159912-28159931 | None:intergenic | 45.0% |
| ! | GGCTGATTCATCGATACAAC+AGG | - | chr8_2:28160296-28160315 | None:intergenic | 45.0% |
| GCATACTCACCTTCCTCATA+TGG | + | chr8_2:28160663-28160682 | Msa1243100:CDS | 45.0% | |
| ATTGATGCTGAGGAAGACTC+TGG | + | chr8_2:28160699-28160718 | Msa1243100:CDS | 45.0% | |
| ! | GAAGACTCTGGAAGATCTAG+TGG | + | chr8_2:28160711-28160730 | Msa1243100:CDS | 45.0% |
| !!! | TATTTTTTTATAATAAGTTT+TGG | + | chr8_2:28158805-28158824 | Msa1243100:intron | 5.0% |
| !! | TTTAATTATTATTTGATATA+CGG | + | chr8_2:28160474-28160493 | Msa1243100:intron | 5.0% |
| CAGGCTACGAGAGTGAACAT+TGG | + | chr8_2:28156019-28156038 | Msa1243100:CDS | 50.0% | |
| GGCTACGAGAGTGAACATTG+GGG | + | chr8_2:28156021-28156040 | Msa1243100:CDS | 50.0% | |
| TGTCTTGCGGAAGGATTACG+GGG | + | chr8_2:28156173-28156192 | Msa1243100:CDS | 50.0% | |
| GGTTATTGAAGGCAGCGGAT+TGG | + | chr8_2:28156361-28156380 | Msa1243100:CDS | 50.0% | |
| ! | GGTTTTTGATGCGGAATGGG+AGG | + | chr8_2:28156383-28156402 | Msa1243100:intron | 50.0% |
| !! | ATGGGACATTCACTTGGTGC+TGG | + | chr8_2:28156453-28156472 | Msa1243100:CDS | 50.0% |
| !! | TGGGACATTCACTTGGTGCT+GGG | + | chr8_2:28156454-28156473 | Msa1243100:CDS | 50.0% |
| TTGAGAGACATACATCGGGC+AGG | - | chr8_2:28156567-28156586 | None:intergenic | 50.0% | |
| ACCAAGCCATCTGAGTAGAG+AGG | + | chr8_2:28156966-28156985 | Msa1243100:intron | 50.0% | |
| CAAGTGTGCGTGCATTGTCA+TGG | + | chr8_2:28157007-28157026 | Msa1243100:intron | 50.0% | |
| ACAGAATCCGCCATGCCATA+AGG | - | chr8_2:28157102-28157121 | None:intergenic | 50.0% | |
| GATTCTGTACCAGCCACCAT+AGG | + | chr8_2:28157114-28157133 | Msa1243100:intron | 50.0% | |
| AGCCTAATACCTATGGTGGC+TGG | - | chr8_2:28157126-28157145 | None:intergenic | 50.0% | |
| ! | CAGGTTTTCGGTATTCACCG+AGG | - | chr8_2:28157494-28157513 | None:intergenic | 50.0% |
| TCTGTTCCCTTGAGGTTACC+AGG | + | chr8_2:28157646-28157665 | Msa1243100:intron | 50.0% | |
| ACAAGGCCAACTGCCAAGAA+AGG | - | chr8_2:28157886-28157905 | None:intergenic | 50.0% | |
| GAGCACCATACTGTACCTGA+AGG | - | chr8_2:28158021-28158040 | None:intergenic | 50.0% | |
| GCAGGTCCCCACAAAATGAT+TGG | - | chr8_2:28158910-28158929 | None:intergenic | 50.0% | |
| CAACTGTACGTGTCAGACAC+GGG | + | chr8_2:28159048-28159067 | Msa1243100:intron | 50.0% | |
| CTCCCTGCGAGAAAAGACTT+CGG | + | chr8_2:28159231-28159250 | Msa1243100:intron | 50.0% | |
| ! | GACCGAAGTCTTTTCTCGCA+GGG | - | chr8_2:28159236-28159255 | None:intergenic | 50.0% |
| TGGCTTCCTGATTGCAGGTT+AGG | + | chr8_2:28159407-28159426 | Msa1243100:intron | 50.0% | |
| ACTGCTGTCCTAACAATGGG+TGG | - | chr8_2:28159440-28159459 | None:intergenic | 50.0% | |
| CTACTGACCATGCCATCCTT+TGG | + | chr8_2:28159507-28159526 | Msa1243100:CDS | 50.0% | |
| GTTCACTAAAGGTTGGGGAC+AGG | - | chr8_2:28159901-28159920 | None:intergenic | 50.0% | |
| ! | CTAACCATCTTTTGCGCAGC+CGG | - | chr8_2:28160564-28160583 | None:intergenic | 50.0% |
| GAGGAAGGTGAGTATGCTTG+AGG | - | chr8_2:28160660-28160679 | None:intergenic | 50.0% | |
| ATGTTTGACGTGGACGACAC+AGG | + | chr8_2:28160795-28160814 | Msa1243100:CDS | 50.0% | |
| TGGGTTGTACTCGTTGGGCT+TGG | + | chr8_2:28155977-28155996 | Msa1243100:CDS | 55.0% | |
| ATGCGGAATGGGAGGTTCTG+AGG | + | chr8_2:28156391-28156410 | Msa1243100:intron | 55.0% | |
| !! | GGGACATTCACTTGGTGCTG+GGG | + | chr8_2:28156455-28156474 | Msa1243100:CDS | 55.0% |
| !! | ACATTCACTTGGTGCTGGGG+TGG | + | chr8_2:28156458-28156477 | Msa1243100:CDS | 55.0% |
| CATACATCGGGCAGGAGCAA+TGG | - | chr8_2:28156559-28156578 | None:intergenic | 55.0% | |
| GTAGACGCTTTCCAGAGCAG+TGG | - | chr8_2:28156859-28156878 | None:intergenic | 55.0% | |
| GCCTCTCTACTCAGATGGCT+TGG | - | chr8_2:28156970-28156989 | None:intergenic | 55.0% | |
| AATTGTCGCATGGTGGCTCG+TGG | + | chr8_2:28157068-28157087 | Msa1243100:intron | 55.0% | |
| !! | TCCATGGCCTTATGGCATGG+CGG | + | chr8_2:28157092-28157111 | Msa1243100:intron | 55.0% |
| CAGGTGCATACAGACGCCTT+GGG | - | chr8_2:28157968-28157987 | None:intergenic | 55.0% | |
| TTGTCGAGCGAAAGCCCTTC+AGG | + | chr8_2:28158003-28158022 | Msa1243100:CDS | 55.0% | |
| ! | CGAAGTCTTTTCTCGCAGGG+AGG | - | chr8_2:28159233-28159252 | None:intergenic | 55.0% |
| ! | CGACCGAAGTCTTTTCTCGC+AGG | - | chr8_2:28159237-28159256 | None:intergenic | 55.0% |
| CGAGAAAAGACTTCGGTCGC+TGG | + | chr8_2:28159238-28159257 | Msa1243100:intron | 55.0% | |
| AGGACAGCAGTACCTGTCGA+TGG | + | chr8_2:28159449-28159468 | Msa1243100:CDS | 55.0% | |
| CAGCAGTACCTGTCGATGGA+AGG | + | chr8_2:28159453-28159472 | Msa1243100:CDS | 55.0% | |
| GCTTACATCGAGAGCCCGTT+GGG | - | chr8_2:28159546-28159565 | None:intergenic | 55.0% | |
| AGCTTACATCGAGAGCCCGT+TGG | - | chr8_2:28159547-28159566 | None:intergenic | 55.0% | |
| GATTCCGGCTGCGCAAAAGA+TGG | + | chr8_2:28160557-28160576 | Msa1243100:CDS | 55.0% | |
| CGGCTGCGCAAAAGATGGTT+AGG | + | chr8_2:28160562-28160581 | Msa1243100:CDS | 55.0% | |
| !! | AAGAGTACCGTGCAGCCCTT+CGG | + | chr8_2:28160613-28160632 | Msa1243100:CDS | 55.0% |
| CAAAGCAACTGCCCTCCGAA+GGG | - | chr8_2:28160631-28160650 | None:intergenic | 55.0% | |
| TGTCGGACGCATGTTTGACG+TGG | + | chr8_2:28160785-28160804 | Msa1243100:CDS | 55.0% | |
| CGTGGACGACACAGGTCATA+TGG | + | chr8_2:28160803-28160822 | Msa1243100:CDS | 55.0% | |
| TGGGCTCCCGAAGGTGGTTA+TGG | + | chr8_2:28156132-28156151 | Msa1243100:intron | 60.0% | |
| !! | TTCACTTGGTGCTGGGGTGG+TGG | + | chr8_2:28156461-28156480 | Msa1243100:CDS | 60.0% |
| ACCTCGGACAACCACTGCTC+TGG | + | chr8_2:28156845-28156864 | Msa1243100:CDS | 60.0% | |
| TCCAGAGCAGTGGTTGTCCG+AGG | - | chr8_2:28156849-28156868 | None:intergenic | 60.0% | |
| ! | CTCGTGGCTCCATGGCCTTA+TGG | + | chr8_2:28157084-28157103 | Msa1243100:intron | 60.0% |
| !! | GGCTCCATGGCCTTATGGCA+TGG | + | chr8_2:28157089-28157108 | Msa1243100:intron | 60.0% |
| TCCGCCATGCCATAAGGCCA+TGG | - | chr8_2:28157096-28157115 | None:intergenic | 60.0% | |
| CCAGGTGCATACAGACGCCT+TGG | - | chr8_2:28157969-28157988 | None:intergenic | 60.0% | |
| ! | CCAAGGCGTCTGTATGCACC+TGG | + | chr8_2:28157966-28157985 | Msa1243100:CDS | 60.0% |
| CCAAAGCAACTGCCCTCCGA+AGG | - | chr8_2:28160632-28160651 | None:intergenic | 60.0% | |
| CCTTCGGAGGGCAGTTGCTT+TGG | + | chr8_2:28160629-28160648 | Msa1243100:CDS | 60.0% | |
| ! | AACCCTCAGTGGGCTCCCGA+AGG | + | chr8_2:28156123-28156142 | Msa1243100:intron | 65.0% |
| CACCTTCGGGAGCCCACTGA+GGG | - | chr8_2:28156128-28156147 | None:intergenic | 65.0% | |
| CATGGTGGCTCGTGGCTCCA+TGG | + | chr8_2:28157076-28157095 | Msa1243100:intron | 65.0% | |
| AGTACCGTGCAGCCCTTCGG+AGG | + | chr8_2:28160616-28160635 | Msa1243100:CDS | 65.0% | |
| GTACCGTGCAGCCCTTCGGA+GGG | + | chr8_2:28160617-28160636 | Msa1243100:CDS | 65.0% | |
| CCACCTTCGGGAGCCCACTG+AGG | - | chr8_2:28156129-28156148 | None:intergenic | 70.0% | |
| ! | CCTCAGTGGGCTCCCGAAGG+TGG | + | chr8_2:28156126-28156145 | Msa1243100:intron | 70.0% |
| CTGCCCTCCGAAGGGCTGCA+CGG | - | chr8_2:28160623-28160642 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 28155931 | 28161109 | 28155931 | ID=Msa1243100;Name=Msa1243100 |
| chr8_2 | mRNA | 28155931 | 28161109 | 28155931 | ID=Msa1243100-mRNA-1;Parent=Msa1243100;Name=Msa1243100-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.5|0.42|1|0.5|0.42|7|261|429 |
| chr8_2 | exon | 28155931 | 28156120 | 28155931 | ID=Msa1243100-mRNA-1:exon:9854;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28156145 | 28156383 | 28156145 | ID=Msa1243100-mRNA-1:exon:9855;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28156405 | 28156632 | 28156405 | ID=Msa1243100-mRNA-1:exon:9856;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28156834 | 28156880 | 28156834 | ID=Msa1243100-mRNA-1:exon:9857;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28157896 | 28158024 | 28157896 | ID=Msa1243100-mRNA-1:exon:9858;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28159424 | 28159559 | 28159424 | ID=Msa1243100-mRNA-1:exon:9859;Parent=Msa1243100-mRNA-1 |
| chr8_2 | exon | 28160528 | 28161109 | 28160528 | ID=Msa1243100-mRNA-1:exon:9860;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28155931 | 28156120 | 28155931 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28156145 | 28156383 | 28156145 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28156405 | 28156632 | 28156405 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28156834 | 28156880 | 28156834 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28157896 | 28158024 | 28157896 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28159424 | 28159559 | 28159424 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | CDS | 28160528 | 28160848 | 28160528 | ID=Msa1243100-mRNA-1:cds;Parent=Msa1243100-mRNA-1 |
| chr8_2 | three_prime_UTR | 28160849 | 28161109 | 28160849 | ID=Msa1243100-mRNA-1:three_prime_utr;Parent=Msa1243100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
