Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20931.t1 | XP_013469123.1 | 94.8 | 248 | 13 | 0 | 47 | 294 | 4 | 251 | 1.50E-130 | 475.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20931.t1 | Q41651 | 77.9 | 249 | 48 | 2 | 48 | 294 | 5 | 248 | 7.3e-105 | 381.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20931.t1 | A0A072VNE4 | 94.8 | 248 | 13 | 0 | 47 | 294 | 4 | 251 | 1.1e-130 | 475.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20931 | 0.834547 | 2.81E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene20931 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene20931 | 0.837176 | 6.07E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene20931 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene049284 | MS.gene20931 | 0.811247 | 7.70E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene20931 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene20931 | 0.820976 | 5.16E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene20931 | 0.814234 | 1.71E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene20931 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene20931 | 0.829056 | 6.37E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene20931 | 0.887784 | 1.05E-72 | -1.69E-46 |
| MS.gene049491 | MS.gene20931 | 0.823183 | 1.59E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene20931 | 0.8465 | 2.09E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene20931 | 0.81124 | 7.73E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene20931 | 0.865961 | 4.04E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene20931 | 0.864134 | 1.51E-64 | -1.69E-46 |
| MS.gene049760 | MS.gene20931 | 0.827415 | 1.58E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene20931 | 0.847327 | 1.24E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene20931 | 0.863198 | 2.95E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene20931 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene20931 | 0.810838 | 9.44E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene20931 | 0.837618 | 4.67E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene20931 | 0.824215 | 9.11E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene20931 | 0.844119 | 9.21E-59 | -1.69E-46 |
| MS.gene050404 | MS.gene20931 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene20931 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene20931 | 0.880948 | 3.60E-70 | -1.69E-46 |
| MS.gene050464 | MS.gene20931 | 0.807163 | 5.78E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene20931 | 0.803193 | 3.92E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene20931 | 0.866197 | 3.40E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene20931 | 0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene05053 | MS.gene20931 | 0.815104 | 1.10E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene20931 | 0.850041 | 2.19E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene20931 | 0.837178 | 6.06E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene20931 | 0.830336 | 3.11E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene20931 | 0.891203 | 4.92E-74 | -1.69E-46 |
| MS.gene050770 | MS.gene20931 | 0.893359 | 6.76E-75 | -1.69E-46 |
| MS.gene050772 | MS.gene20931 | 0.868369 | 6.87E-66 | -1.69E-46 |
| MS.gene050783 | MS.gene20931 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene20931 | 0.809074 | 2.26E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene20931 | 0.845478 | 3.96E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene20931 | 0.825845 | 3.75E-54 | -1.69E-46 |
| MS.gene05100 | MS.gene20931 | 0.835517 | 1.60E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene20931 | 0.861057 | 1.34E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene20931 | 0.894546 | 2.23E-75 | -1.69E-46 |
| MS.gene051228 | MS.gene20931 | 0.877577 | 5.62E-69 | -1.69E-46 |
| MS.gene051387 | MS.gene20931 | 0.831817 | 1.35E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene20931 | 0.853579 | 2.18E-61 | -1.69E-46 |
| MS.gene051605 | MS.gene20931 | 0.805159 | 1.53E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene20931 | 0.89306 | 8.93E-75 | -1.69E-46 |
| MS.gene051810 | MS.gene20931 | 0.819078 | 1.40E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene20931 | 0.849975 | 2.29E-60 | -1.69E-46 |
| MS.gene051877 | MS.gene20931 | 0.816401 | 5.64E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene20931 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene20931 | 0.863328 | 2.69E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene20931 | 0.848335 | 6.54E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene20931 | 0.850253 | 1.91E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene20931 | 0.871157 | 8.47E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene20931 | 0.89621 | 4.59E-76 | -1.69E-46 |
| MS.gene052322 | MS.gene20931 | 0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene20931 | 0.838706 | 2.45E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene20931 | 0.846365 | 2.27E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene20931 | 0.869249 | 3.57E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene20931 | 0.84352 | 1.33E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene20931 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene20931 | 0.829123 | 6.14E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene20931 | 0.811103 | 8.27E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene20931 | 0.820659 | 6.10E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene20931 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene20931 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene20931 | 0.800376 | 1.48E-48 | -1.69E-46 |
| MS.gene053009 | MS.gene20931 | 0.877384 | 6.56E-69 | -1.69E-46 |
| MS.gene053103 | MS.gene20931 | 0.866796 | 2.19E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene20931 | 0.889376 | 2.56E-73 | -1.69E-46 |
| MS.gene053107 | MS.gene20931 | 0.84075 | 7.20E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene20931 | 0.84132 | 5.10E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene20931 | 0.857722 | 1.35E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene20931 | 0.848191 | 7.17E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene20931 | 0.834451 | 2.97E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene20931 | 0.887136 | 1.86E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene20931 | 0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene20931 | 0.830733 | 2.49E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene20931 | 0.840504 | 8.35E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene20931 | 0.839481 | 1.54E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene20931 | 0.802803 | 4.72E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene20931 | 0.826705 | 2.34E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene20931 | 0.824553 | 7.59E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene20931 | 0.889062 | 3.39E-73 | -1.69E-46 |
| MS.gene05455 | MS.gene20931 | 0.801906 | 7.22E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene20931 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene20931 | 0.853414 | 2.43E-61 | -1.69E-46 |
| MS.gene054802 | MS.gene20931 | 0.859543 | 3.85E-63 | -1.69E-46 |
| MS.gene054803 | MS.gene20931 | 0.858664 | 7.06E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene20931 | 0.861268 | 1.16E-63 | -1.69E-46 |
| MS.gene054927 | MS.gene20931 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene20931 | 0.833176 | 6.20E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene20931 | 0.865293 | 6.56E-65 | -1.69E-46 |
| MS.gene055116 | MS.gene20931 | 0.876678 | 1.15E-68 | -1.69E-46 |
| MS.gene055206 | MS.gene20931 | 0.833073 | 6.57E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene20931 | 0.82347 | 1.36E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene20931 | 0.872167 | 3.92E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene20931 | 0.858064 | 1.06E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene20931 | 0.827285 | 1.70E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene20931 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene20931 | 0.894924 | 1.56E-75 | -1.69E-46 |
| MS.gene055412 | MS.gene20931 | 0.81555 | 8.73E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene20931 | 0.831108 | 2.01E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene20931 | 0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene20931 | 0.87867 | 2.33E-69 | -1.69E-46 |
| MS.gene055502 | MS.gene20931 | 0.812505 | 4.10E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene20931 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene055636 | MS.gene20931 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene20931 | 0.836791 | 7.61E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene20931 | 0.864344 | 1.30E-64 | -1.69E-46 |
| MS.gene055896 | MS.gene20931 | 0.849079 | 4.07E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene20931 | 0.867018 | 1.86E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene20931 | 0.803259 | 3.80E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene20931 | 0.823769 | 1.16E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene20931 | 0.842705 | 2.20E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene20931 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene20931 | 0.809769 | 1.61E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene20931 | 0.842774 | 2.11E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene20931 | 0.862658 | 4.34E-64 | -1.69E-46 |
| MS.gene056487 | MS.gene20931 | 0.821107 | 4.81E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene20931 | 0.8474 | 1.18E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene20931 | 0.888376 | 6.24E-73 | -1.69E-46 |
| MS.gene056612 | MS.gene20931 | 0.830341 | 3.10E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene20931 | 0.836005 | 1.21E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene20931 | 0.836011 | 1.20E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene20931 | 0.840198 | 1.00E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene20931 | 0.853651 | 2.08E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene20931 | 0.827433 | 1.57E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene20931 | 0.821292 | 4.36E-53 | -1.69E-46 |
| MS.gene057123 | MS.gene20931 | 0.84174 | 3.96E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene20931 | 0.900165 | 9.63E-78 | -1.69E-46 |
| MS.gene057146 | MS.gene20931 | 0.880504 | 5.20E-70 | -1.69E-46 |
| MS.gene057246 | MS.gene20931 | 0.830394 | 3.01E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene20931 | 0.834679 | 2.61E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene20931 | 0.851135 | 1.08E-60 | -1.69E-46 |
| MS.gene05735 | MS.gene20931 | 0.842831 | 2.03E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene20931 | 0.86652 | 2.68E-65 | -1.69E-46 |
| MS.gene057734 | MS.gene20931 | 0.806125 | 9.57E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene20931 | 0.816504 | 5.35E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene20931 | 0.81365 | 2.30E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene20931 | 0.817243 | 3.65E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene20931 | 0.870163 | 1.80E-66 | -1.69E-46 |
| MS.gene058082 | MS.gene20931 | 0.866564 | 2.60E-65 | -1.69E-46 |
| MS.gene058130 | MS.gene20931 | 0.806671 | 7.34E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene20931 | 0.835388 | 1.73E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene20931 | 0.880246 | 6.43E-70 | -1.69E-46 |
| MS.gene058323 | MS.gene20931 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene20931 | 0.83708 | 6.42E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene20931 | 0.838445 | 2.86E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene20931 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene20931 | 0.899643 | 1.62E-77 | -1.69E-46 |
| MS.gene058723 | MS.gene20931 | 0.863598 | 2.22E-64 | -1.69E-46 |
| MS.gene058748 | MS.gene20931 | 0.821713 | 3.49E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene20931 | 0.806662 | 7.38E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene20931 | 0.826863 | 2.15E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene20931 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene20931 | 0.834912 | 2.28E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene20931 | 0.854875 | 9.20E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene20931 | 0.817704 | 2.87E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene20931 | 0.828416 | 9.10E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene20931 | 0.821799 | 3.33E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene20931 | 0.869852 | 2.27E-66 | -1.69E-46 |
| MS.gene059366 | MS.gene20931 | 0.808565 | 2.91E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene20931 | 0.894746 | 1.85E-75 | -1.69E-46 |
| MS.gene059597 | MS.gene20931 | 0.862519 | 4.79E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene20931 | 0.838593 | 2.62E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene20931 | 0.872496 | 3.04E-67 | -1.69E-46 |
| MS.gene059677 | MS.gene20931 | 0.819617 | 1.06E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene20931 | 0.888454 | 5.82E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene20931 | 0.895216 | 1.18E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene20931 | 0.897448 | 1.39E-76 | -1.69E-46 |
| MS.gene059708 | MS.gene20931 | 0.812393 | 4.34E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene20931 | 0.831708 | 1.43E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene20931 | 0.841059 | 5.98E-58 | -1.69E-46 |
| MS.gene059858 | MS.gene20931 | 0.82022 | 7.70E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene20931 | 0.821384 | 4.16E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene20931 | 0.821167 | 4.66E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene20931 | 0.849358 | 3.40E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene20931 | 0.926077 | 7.69E-91 | -1.69E-46 |
| MS.gene059974 | MS.gene20931 | 0.805702 | 1.18E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene20931 | 0.816325 | 5.86E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene20931 | 0.807487 | 4.93E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene20931 | 0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene20931 | 0.81088 | 9.25E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene20931 | 0.913281 | 7.38E-84 | -1.69E-46 |
| MS.gene060818 | MS.gene20931 | 0.875623 | 2.66E-68 | -1.69E-46 |
| MS.gene060835 | MS.gene20931 | 0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene20931 | 0.820842 | 5.54E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene20931 | 0.827708 | 1.35E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene20931 | 0.824121 | 9.58E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene20931 | 0.904569 | 1.07E-79 | -1.69E-46 |
| MS.gene061049 | MS.gene20931 | 0.833159 | 6.26E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene20931 | -0.86905 | 4.14E-66 | -1.69E-46 |
| MS.gene061150 | MS.gene20931 | 0.817069 | 3.99E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene20931 | 0.906815 | 9.91E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20931.t1 | MTR_1g085560 | 94.758 | 248 | 13 | 0 | 47 | 294 | 4 | 251 | 8.00e-177 | 488 |
| MS.gene20931.t1 | MTR_7g110980 | 69.880 | 249 | 68 | 5 | 52 | 294 | 14 | 261 | 6.01e-115 | 332 |
| MS.gene20931.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 95 | 292 | 48 | 243 | 6.48e-88 | 263 |
| MS.gene20931.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 95 | 292 | 48 | 243 | 6.48e-88 | 263 |
| MS.gene20931.t1 | MTR_3g463900 | 65.027 | 183 | 55 | 2 | 117 | 292 | 23 | 203 | 2.71e-77 | 234 |
| MS.gene20931.t1 | MTR_3g070500 | 63.277 | 177 | 55 | 3 | 121 | 290 | 58 | 231 | 1.41e-71 | 221 |
| MS.gene20931.t1 | MTR_7g116340 | 67.808 | 146 | 40 | 1 | 129 | 267 | 5 | 150 | 3.71e-68 | 209 |
| MS.gene20931.t1 | MTR_4g075290 | 65.101 | 149 | 45 | 1 | 126 | 267 | 2 | 150 | 6.39e-68 | 209 |
| MS.gene20931.t1 | MTR_3g117750 | 66.438 | 146 | 42 | 1 | 129 | 267 | 13 | 158 | 3.41e-66 | 205 |
| MS.gene20931.t1 | MTR_8g040180 | 58.084 | 167 | 63 | 3 | 130 | 290 | 20 | 185 | 4.53e-61 | 192 |
| MS.gene20931.t1 | MTR_4g073650 | 52.604 | 192 | 79 | 3 | 111 | 291 | 25 | 215 | 7.65e-61 | 193 |
| MS.gene20931.t1 | MTR_7g095750 | 59.763 | 169 | 58 | 2 | 130 | 290 | 9 | 175 | 1.33e-60 | 203 |
| MS.gene20931.t1 | MTR_8g079690 | 57.647 | 170 | 63 | 2 | 129 | 290 | 5 | 173 | 1.17e-59 | 194 |
| MS.gene20931.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 128 | 291 | 4 | 174 | 1.56e-59 | 192 |
| MS.gene20931.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 128 | 291 | 4 | 174 | 1.69e-59 | 194 |
| MS.gene20931.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 128 | 291 | 4 | 174 | 2.07e-59 | 192 |
| MS.gene20931.t1 | MTR_3g070500 | 68.939 | 132 | 33 | 2 | 121 | 245 | 58 | 188 | 1.19e-56 | 181 |
| MS.gene20931.t1 | MTR_3g070500 | 68.224 | 107 | 26 | 2 | 121 | 220 | 58 | 163 | 9.18e-42 | 142 |
| MS.gene20931.t1 | MTR_3g070500 | 67.925 | 106 | 26 | 2 | 121 | 219 | 58 | 162 | 2.74e-41 | 140 |
| MS.gene20931.t1 | MTR_2g085075 | 52.288 | 153 | 67 | 5 | 135 | 286 | 464 | 611 | 2.97e-40 | 148 |
| MS.gene20931.t1 | MTR_1g011980 | 45.856 | 181 | 87 | 3 | 122 | 294 | 1 | 178 | 3.17e-40 | 149 |
| MS.gene20931.t1 | MTR_3g107660 | 46.821 | 173 | 82 | 2 | 130 | 294 | 12 | 182 | 3.79e-40 | 149 |
| MS.gene20931.t1 | MTR_7g105220 | 49.664 | 149 | 69 | 5 | 140 | 287 | 17 | 160 | 1.91e-39 | 136 |
| MS.gene20931.t1 | MTR_3g085705 | 61.290 | 93 | 32 | 2 | 180 | 272 | 32 | 120 | 7.37e-34 | 120 |
| MS.gene20931.t1 | MTR_8g036015 | 50.345 | 145 | 64 | 5 | 142 | 284 | 10 | 148 | 2.19e-32 | 117 |
| MS.gene20931.t1 | MTR_5g015500 | 47.222 | 144 | 70 | 5 | 142 | 284 | 314 | 452 | 4.19e-29 | 116 |
| MS.gene20931.t1 | MTR_5g015500 | 47.222 | 144 | 70 | 5 | 142 | 284 | 354 | 492 | 7.39e-29 | 115 |
| MS.gene20931.t1 | MTR_2g023120 | 44.872 | 156 | 74 | 8 | 135 | 285 | 15 | 163 | 3.98e-21 | 93.6 |
| MS.gene20931.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 140 | 293 | 8 | 167 | 8.81e-16 | 77.8 |
| MS.gene20931.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 140 | 293 | 25 | 184 | 9.80e-16 | 77.8 |
| MS.gene20931.t1 | MTR_8g442420 | 36.905 | 168 | 84 | 9 | 140 | 293 | 8 | 167 | 1.11e-14 | 74.3 |
| MS.gene20931.t1 | MTR_2g461260 | 26.829 | 205 | 109 | 8 | 112 | 277 | 42 | 244 | 4.04e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20931.t1 | AT3G62030 | 71.028 | 214 | 54 | 4 | 85 | 293 | 48 | 258 | 4.04e-105 | 307 |
| MS.gene20931.t1 | AT3G62030 | 70.698 | 215 | 54 | 4 | 85 | 293 | 48 | 259 | 7.30e-105 | 306 |
| MS.gene20931.t1 | AT3G62030 | 70.370 | 216 | 55 | 4 | 85 | 294 | 101 | 313 | 3.79e-104 | 306 |
| MS.gene20931.t1 | AT5G13120 | 64.615 | 195 | 61 | 3 | 105 | 292 | 59 | 252 | 1.68e-86 | 259 |
| MS.gene20931.t1 | AT5G13120 | 64.615 | 195 | 61 | 3 | 105 | 292 | 63 | 256 | 1.85e-86 | 259 |
| MS.gene20931.t1 | AT2G29960 | 65.405 | 185 | 50 | 3 | 120 | 292 | 19 | 201 | 1.69e-76 | 232 |
| MS.gene20931.t1 | AT2G29960 | 65.405 | 185 | 50 | 3 | 120 | 292 | 19 | 201 | 1.69e-76 | 232 |
| MS.gene20931.t1 | AT5G58710 | 66.286 | 175 | 50 | 2 | 125 | 292 | 32 | 204 | 1.20e-75 | 230 |
| MS.gene20931.t1 | AT3G55920 | 58.462 | 195 | 71 | 3 | 105 | 292 | 37 | 228 | 1.92e-71 | 220 |
| MS.gene20931.t1 | AT2G21130 | 62.722 | 169 | 54 | 2 | 129 | 290 | 6 | 172 | 1.33e-70 | 216 |
| MS.gene20931.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 129 | 290 | 5 | 171 | 3.71e-69 | 212 |
| MS.gene20931.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 129 | 290 | 5 | 171 | 3.71e-69 | 212 |
| MS.gene20931.t1 | AT4G38740 | 60.947 | 169 | 57 | 2 | 129 | 290 | 5 | 171 | 1.49e-68 | 211 |
| MS.gene20931.t1 | AT2G16600 | 66.438 | 146 | 42 | 1 | 129 | 267 | 6 | 151 | 6.48e-68 | 209 |
| MS.gene20931.t1 | AT2G29960 | 60.428 | 187 | 50 | 4 | 118 | 292 | 17 | 191 | 2.26e-67 | 208 |
| MS.gene20931.t1 | AT4G34870 | 63.014 | 146 | 47 | 1 | 129 | 267 | 5 | 150 | 1.04e-61 | 193 |
| MS.gene20931.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 122 | 289 | 1 | 174 | 1.41e-60 | 197 |
| MS.gene20931.t1 | AT2G38730 | 57.485 | 167 | 64 | 3 | 130 | 290 | 34 | 199 | 2.58e-60 | 191 |
| MS.gene20931.t1 | AT4G34960 | 55.682 | 176 | 70 | 2 | 125 | 293 | 44 | 218 | 4.02e-60 | 191 |
| MS.gene20931.t1 | AT2G15790 | 58.721 | 172 | 62 | 2 | 128 | 291 | 4 | 174 | 4.40e-59 | 192 |
| MS.gene20931.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 122 | 289 | 1 | 174 | 6.54e-59 | 197 |
| MS.gene20931.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 122 | 289 | 1 | 174 | 6.54e-59 | 197 |
| MS.gene20931.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 122 | 289 | 1 | 174 | 6.54e-59 | 197 |
| MS.gene20931.t1 | AT2G16600 | 61.871 | 139 | 38 | 1 | 129 | 267 | 6 | 129 | 1.11e-57 | 182 |
| MS.gene20931.t1 | AT4G34960 | 60.156 | 128 | 44 | 1 | 125 | 245 | 44 | 171 | 3.14e-47 | 156 |
| MS.gene20931.t1 | AT3G44600 | 44.920 | 187 | 96 | 6 | 101 | 286 | 445 | 625 | 6.63e-41 | 150 |
| MS.gene20931.t1 | AT2G36130 | 48.993 | 149 | 70 | 5 | 140 | 287 | 17 | 160 | 5.92e-39 | 135 |
| MS.gene20931.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 122 | 289 | 1 | 174 | 7.67e-38 | 142 |
| MS.gene20931.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 122 | 289 | 1 | 174 | 7.67e-38 | 142 |
| MS.gene20931.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 122 | 289 | 1 | 174 | 7.67e-38 | 142 |
| MS.gene20931.t1 | AT4G32420 | 44.886 | 176 | 87 | 2 | 122 | 289 | 1 | 174 | 7.67e-38 | 142 |
| MS.gene20931.t1 | AT4G32420 | 47.403 | 154 | 73 | 1 | 122 | 267 | 1 | 154 | 2.67e-37 | 140 |
| MS.gene20931.t1 | AT3G22920 | 43.605 | 172 | 80 | 5 | 128 | 290 | 4 | 167 | 8.42e-35 | 126 |
| MS.gene20931.t1 | AT1G01940 | 48.276 | 145 | 67 | 5 | 142 | 284 | 10 | 148 | 3.87e-32 | 117 |
| MS.gene20931.t1 | AT5G67530 | 44.898 | 147 | 75 | 5 | 142 | 287 | 353 | 494 | 4.73e-29 | 116 |
| MS.gene20931.t1 | AT4G33060 | 48.800 | 125 | 56 | 5 | 135 | 256 | 15 | 134 | 1.97e-25 | 105 |
| MS.gene20931.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 140 | 293 | 8 | 167 | 1.25e-16 | 79.3 |
| MS.gene20931.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 140 | 293 | 8 | 167 | 2.58e-16 | 79.3 |
| MS.gene20931.t1 | AT3G66654 | 25.105 | 239 | 138 | 9 | 53 | 274 | 4 | 218 | 3.32e-12 | 65.5 |
| MS.gene20931.t1 | AT3G66654 | 25.105 | 239 | 138 | 9 | 53 | 274 | 4 | 218 | 3.32e-12 | 65.5 |
| MS.gene20931.t1 | AT3G66654 | 25.105 | 239 | 138 | 9 | 53 | 274 | 4 | 218 | 3.32e-12 | 65.5 |
| MS.gene20931.t1 | AT3G66654 | 25.105 | 239 | 138 | 9 | 53 | 274 | 4 | 218 | 3.32e-12 | 65.5 |
| MS.gene20931.t1 | AT3G66654 | 25.105 | 239 | 138 | 9 | 53 | 274 | 4 | 218 | 3.32e-12 | 65.5 |
Find 67 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGTCAGAACCTTCTTTC+TGG | 0.154886 | 1.3:+60749185 | MS.gene20931:intron |
| AGGATTGTTATTGGCCTATT+TGG | 0.177067 | 1.3:+60749964 | MS.gene20931:CDS |
| AATCAAAGATTTCATGATTC+AGG | 0.190133 | 1.3:+60750189 | MS.gene20931:CDS |
| GACAATCGCCATGTTGTATT+TGG | 0.201360 | 1.3:+60751750 | MS.gene20931:CDS |
| TCGGAAATTCTCAACTGTTT+TGG | 0.213114 | 1.3:-60749998 | None:intergenic |
| AATTGACTGCCGTTACTATT+AGG | 0.258601 | 1.3:-60750621 | None:intergenic |
| TTCATCTTCAACATTGTCTT+TGG | 0.280645 | 1.3:+60747164 | MS.gene20931:CDS |
| TCTGCTGGAAGGATTGTTAT+TGG | 0.310916 | 1.3:+60749955 | MS.gene20931:CDS |
| GAAAACCTTGCTTGTTACTT+TGG | 0.335769 | 1.3:-60749908 | None:intergenic |
| TCATTACGCGGCTAGGCTTT+CGG | 0.339565 | 1.3:+60749683 | MS.gene20931:CDS |
| TGGGAACAACATCTCCAAAT+AGG | 0.365016 | 1.3:-60749978 | None:intergenic |
| GCAACTGCTGCTGTCGTAAC+TGG | 0.371651 | 1.3:+60747189 | MS.gene20931:CDS |
| GGTTGTAACACGGGAGATAA+TGG | 0.373637 | 1.3:+60747210 | MS.gene20931:CDS |
| ACTGGTGGAGTCAGTATCTA+TGG | 0.378727 | 1.3:+60750342 | MS.gene20931:CDS |
| AAGCGAAATCAATCACTTCT+CGG | 0.414942 | 1.3:+60749721 | MS.gene20931:CDS |
| CGTGCAGGAGAGAAAGGATA+TGG | 0.427253 | 1.3:+60750139 | MS.gene20931:intron |
| TTCTGGTTTCAATGCTGTCC+AGG | 0.432366 | 1.3:+60749202 | MS.gene20931:CDS |
| TCTGGAGAACTTCCTCTAGA+TGG | 0.439502 | 1.3:+60751870 | MS.gene20931:CDS |
| TTCTTTGATGTAGTTATTGG+AGG | 0.441576 | 1.3:+60749928 | MS.gene20931:CDS |
| ATCAAAGATTTCATGATTCA+GGG | 0.450983 | 1.3:+60750190 | MS.gene20931:CDS |
| GTATTTGGACATGTCATTGA+TGG | 0.451288 | 1.3:+60751765 | MS.gene20931:CDS |
| CAAGGTCCCTGCTTGTTACA+AGG | 0.477818 | 1.3:+60747114 | MS.gene20931:CDS |
| AGATTTCATGATTCAGGGAG+GGG | 0.477957 | 1.3:+60750195 | MS.gene20931:CDS |
| GGATGCAGTAAATTGTCATC+AGG | 0.485711 | 1.3:+60749657 | MS.gene20931:CDS |
| TCATGCAAAATTGTTAACTC+TGG | 0.487464 | 1.3:+60751852 | MS.gene20931:CDS |
| AATTTCCGAGCTTTGTGCAC+AGG | 0.492690 | 1.3:+60750012 | MS.gene20931:CDS |
| GCAGTGAAGCATGTTGGTCC+TGG | 0.495639 | 1.3:+60750573 | MS.gene20931:intron |
| AATAACCGTGCAGGAGAGAA+AGG | 0.499489 | 1.3:+60750133 | MS.gene20931:intron |
| ACTGCATCCAAGGTGTGCTC+TGG | 0.499496 | 1.3:-60749643 | None:intergenic |
| TTTAATTGGATGCAGGGAAC+TGG | 0.519277 | 1.3:+60750324 | MS.gene20931:intron |
| TGCTTGTTACAAGGCTGCAC+CGG | 0.525891 | 1.3:+60747123 | MS.gene20931:CDS |
| CAGGATATCATTACGCGGCT+AGG | 0.536024 | 1.3:+60749676 | MS.gene20931:CDS |
| GCTTACCTGTGCACAAAGCT+CGG | 0.537267 | 1.3:-60750017 | None:intergenic |
| TTTGATTATGCGATGGAAGG+TGG | 0.537643 | 1.3:-60750173 | None:intergenic |
| CATGTTGTAGACTTCATGGT+TGG | 0.543936 | 1.3:+60751728 | MS.gene20931:intron |
| TGTGAGGACACTTGAGTCAC+AGG | 0.545996 | 1.3:+60751797 | MS.gene20931:CDS |
| TGGACATGTCATTGATGGAA+TGG | 0.546157 | 1.3:+60751770 | MS.gene20931:CDS |
| GGTGCAGCCTTGTAACAAGC+AGG | 0.563614 | 1.3:-60747121 | None:intergenic |
| TTTGCCATGCTCAAAACTCC+AGG | 0.566786 | 1.3:-60750591 | None:intergenic |
| GTTATTGGAGGTGAATCTGC+TGG | 0.567014 | 1.3:+60749940 | MS.gene20931:CDS |
| ATGACAATTTACTGCATCCA+AGG | 0.568939 | 1.3:-60749653 | None:intergenic |
| TGAAATCTTTGATTATGCGA+TGG | 0.571761 | 1.3:-60750180 | None:intergenic |
| AAGATTTCATGATTCAGGGA+GGG | 0.575956 | 1.3:+60750194 | MS.gene20931:CDS |
| CTTGTAACAAGCAGGGACCT+TGG | 0.577023 | 1.3:-60747113 | None:intergenic |
| AATTGGATGCAGGGAACTGG+TGG | 0.579513 | 1.3:+60750327 | MS.gene20931:intron |
| TTCCTTGCAGTGAAGCATGT+TGG | 0.583628 | 1.3:+60750567 | MS.gene20931:intron |
| CAGCATTGAAACCAGAAAGA+AGG | 0.585026 | 1.3:-60749196 | None:intergenic |
| ACTGCCGTTACTATTAGGAC+CGG | 0.594476 | 1.3:-60750616 | None:intergenic |
| TGTCGTAACTGGTTGTAACA+CGG | 0.595768 | 1.3:+60747200 | MS.gene20931:CDS |
| ATCTTTGATTATGCGATGGA+AGG | 0.597625 | 1.3:-60750176 | None:intergenic |
| GTCGTAACTGGTTGTAACAC+GGG | 0.598542 | 1.3:+60747201 | MS.gene20931:CDS |
| ACACAGAAACATGGAATCAC+CGG | 0.607771 | 1.3:-60747142 | None:intergenic |
| GAGACAAGCAGCTACAACAA+TGG | 0.607894 | 1.3:+60751819 | MS.gene20931:CDS |
| TTGGAGGTGAATCTGCTGGA+AGG | 0.612520 | 1.3:+60749944 | MS.gene20931:CDS |
| TCCATCCAATCAATGCTCCA+AGG | 0.614260 | 1.3:+60747096 | None:intergenic |
| TGAAGATGAACACAGAAACA+TGG | 0.619432 | 1.3:-60747151 | None:intergenic |
| CAGGGAGGGGACTTCACAGA+AGG | 0.623364 | 1.3:+60750208 | MS.gene20931:CDS |
| AGCAGTACCAGAGCACACCT+TGG | 0.625062 | 1.3:+60749636 | MS.gene20931:CDS |
| GTGCAGCCTTGTAACAAGCA+GGG | 0.639314 | 1.3:-60747120 | None:intergenic |
| GCAAGCCAAAGTAACAAGCA+AGG | 0.646742 | 1.3:+60749903 | MS.gene20931:CDS |
| AATGCCGGTCCTAATAGTAA+CGG | 0.652519 | 1.3:+60750612 | MS.gene20931:CDS |
| AGGAGAGATCAACCATCTAG+AGG | 0.666652 | 1.3:-60751882 | None:intergenic |
| AAAGATTTCATGATTCAGGG+AGG | 0.670380 | 1.3:+60750193 | MS.gene20931:CDS |
| GGTGGAGTCAGTATCTATGG+TGG | 0.680041 | 1.3:+60750345 | MS.gene20931:CDS |
| TGACATGTCCAAATACAACA+TGG | 0.711914 | 1.3:-60751758 | None:intergenic |
| TTGATGGAATGGATGTTGTG+AGG | 0.719565 | 1.3:+60751781 | MS.gene20931:CDS |
| GTCATCAGGATATCATTACG+CGG | 0.726671 | 1.3:+60749671 | MS.gene20931:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATATTATTAAAACTT+GGG | - | chr1.3:60751061-60751080 | None:intergenic | 10.0% |
| !! | CTTATTTAAATAAATTTCAA+AGG | - | chr1.3:60750805-60750824 | None:intergenic | 10.0% |
| !!! | AATTTTAATTCAATTTCTTA+CGG | - | chr1.3:60748544-60748563 | None:intergenic | 10.0% |
| !!! | CTTTGAATTAATTTTTTTTT+TGG | - | chr1.3:60748940-60748959 | None:intergenic | 10.0% |
| !!! | TTAAAAAGTATTACTTTTAA+GGG | + | chr1.3:60748138-60748157 | MS.gene20931:intron | 10.0% |
| !!! | TTGTTTTGATAATTAAAATT+TGG | + | chr1.3:60747502-60747521 | MS.gene20931:intron | 10.0% |
| !!! | TTTAAAAAGTATTACTTTTA+AGG | + | chr1.3:60748137-60748156 | MS.gene20931:intron | 10.0% |
| !!! | TTTTTTACTTTAATTTTACA+CGG | - | chr1.3:60747738-60747757 | None:intergenic | 10.0% |
| !! | AATGTAGAAAATTTCAATTT+GGG | + | chr1.3:60748564-60748583 | MS.gene20931:intron | 15.0% |
| !! | ACAAATTTAAATCTGAATAA+TGG | - | chr1.3:60750478-60750497 | None:intergenic | 15.0% |
| !! | GAAAACATATTATTAAAACT+TGG | - | chr1.3:60751062-60751081 | None:intergenic | 15.0% |
| !! | GAAGAAAAAAAAAATGTTAA+CGG | - | chr1.3:60748300-60748319 | None:intergenic | 15.0% |
| !! | TAATCTAATAAACTATTCTA+AGG | + | chr1.3:60750749-60750768 | MS.gene20931:intron | 15.0% |
| !! | TAATGTAGAAAATTTCAATT+TGG | + | chr1.3:60748563-60748582 | MS.gene20931:intron | 15.0% |
| !! | TTTAATAAGTCTTTAAATGT+GGG | + | chr1.3:60749459-60749478 | MS.gene20931:intron | 15.0% |
| !!! | AAATTAGAGTTTTGAAATAT+AGG | - | chr1.3:60751227-60751246 | None:intergenic | 15.0% |
| !!! | AATTTAAAACTTGCTTTTTT+TGG | + | chr1.3:60748884-60748903 | MS.gene20931:intron | 15.0% |
| !!! | ATTTAAAACTTGCTTTTTTT+GGG | + | chr1.3:60748885-60748904 | MS.gene20931:intron | 15.0% |
| !!! | CAAGTTTTAAATTAAAAGTA+GGG | - | chr1.3:60748877-60748896 | None:intergenic | 15.0% |
| !!! | GTTTAAATTTGTTTAGATTT+AGG | + | chr1.3:60751675-60751694 | MS.gene20931:intron | 15.0% |
| !!! | TTGTTTTTGTTTTCATTTTA+GGG | + | chr1.3:60749594-60749613 | MS.gene20931:intron | 15.0% |
| !!! | TTTGAAATAATTTATGTGAT+AGG | + | chr1.3:60748963-60748982 | MS.gene20931:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTCATTTT+AGG | + | chr1.3:60749593-60749612 | MS.gene20931:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTTTTCA+CGG | + | chr1.3:60748307-60748326 | MS.gene20931:intron | 15.0% |
| !! | AAAAAAAGGAAAATGTTAAC+CGG | + | chr1.3:60748039-60748058 | MS.gene20931:intron | 20.0% |
| !! | AAATGTTAACGGAAAATTAA+CGG | - | chr1.3:60748289-60748308 | None:intergenic | 20.0% |
| !! | AAATTACAAAATACAACCAA+TGG | - | chr1.3:60748706-60748725 | None:intergenic | 20.0% |
| !! | AATAAGGAGATAAAGAAAAT+GGG | + | chr1.3:60748596-60748615 | MS.gene20931:intron | 20.0% |
| !! | AATTTAGCCTAGAAAAAAAA+AGG | + | chr1.3:60748025-60748044 | MS.gene20931:intron | 20.0% |
| !! | AGAATTAACAAAGAACAAAT+TGG | + | chr1.3:60748677-60748696 | MS.gene20931:intron | 20.0% |
| !! | ATGTAGAAAATTTCAATTTG+GGG | + | chr1.3:60748565-60748584 | MS.gene20931:intron | 20.0% |
| !! | ATTCTTAAAGTAATAGAAGA+TGG | - | chr1.3:60750680-60750699 | None:intergenic | 20.0% |
| !! | GAATTAACAAAGAACAAATT+GGG | + | chr1.3:60748678-60748697 | MS.gene20931:intron | 20.0% |
| !! | GTTTAATAAGTCTTTAAATG+TGG | + | chr1.3:60749458-60749477 | MS.gene20931:intron | 20.0% |
| !! | TAATAAGGAGATAAAGAAAA+TGG | + | chr1.3:60748595-60748614 | MS.gene20931:intron | 20.0% |
| !! | TCTATATGATGATAACTTAA+GGG | - | chr1.3:60748241-60748260 | None:intergenic | 20.0% |
| !! | TGTAAATGTACATTGTTAAT+GGG | + | chr1.3:60749561-60749580 | MS.gene20931:intron | 20.0% |
| !! | TTAAGGACAAATGTATTAAT+CGG | + | chr1.3:60747307-60747326 | MS.gene20931:intron | 20.0% |
| !! | TTAGCATTTGTATTAACATT+TGG | - | chr1.3:60750875-60750894 | None:intergenic | 20.0% |
| !! | TTCTTAAAGTAATAGAAGAT+GGG | - | chr1.3:60750679-60750698 | None:intergenic | 20.0% |
| !!! | ACATTTTCCTTTTTTTTTCT+AGG | - | chr1.3:60748035-60748054 | None:intergenic | 20.0% |
| !!! | AGCATTTAGAATAACTTATT+CGG | - | chr1.3:60750911-60750930 | None:intergenic | 20.0% |
| !!! | ATTACTTTAAGAATCAGATA+AGG | + | chr1.3:60750686-60750705 | MS.gene20931:intron | 20.0% |
| !!! | ATTGTATGTTTTAAAACTAG+AGG | - | chr1.3:60748213-60748232 | None:intergenic | 20.0% |
| !!! | CAATTTTATAATGGAAAACA+GGG | - | chr1.3:60748419-60748438 | None:intergenic | 20.0% |
| !!! | CACATCAAATATGTTTTAAT+TGG | + | chr1.3:60750310-60750329 | MS.gene20931:intron | 20.0% |
| !!! | CTGTTTTCCATTATAAAATT+GGG | + | chr1.3:60748418-60748437 | MS.gene20931:intron | 20.0% |
| !!! | GCAAGTTTTAAATTAAAAGT+AGG | - | chr1.3:60748878-60748897 | None:intergenic | 20.0% |
| !!! | TAAGCAATCAAATTTTTCTT+TGG | + | chr1.3:60750035-60750054 | MS.gene20931:intron | 20.0% |
| !!! | TGTCATTTTAATCTTTTTAC+TGG | + | chr1.3:60750495-60750514 | MS.gene20931:intron | 20.0% |
| !!! | TGTTTTTGTTTTCATTTTAG+GGG | + | chr1.3:60749595-60749614 | MS.gene20931:intron | 20.0% |
| !!! | TTACTTTAAGAATCAGATAA+GGG | + | chr1.3:60750687-60750706 | MS.gene20931:intron | 20.0% |
| !!! | TTCTTTAAATATCTCTTTTG+CGG | - | chr1.3:60747238-60747257 | None:intergenic | 20.0% |
| !!! | TTGTATGTTTTAAAACTAGA+GGG | - | chr1.3:60748212-60748231 | None:intergenic | 20.0% |
| !!! | TTTCATTTTAATAAACCTCA+GGG | - | chr1.3:60748181-60748200 | None:intergenic | 20.0% |
| !!! | TTTGCCATCTTTTTTAATAA+GGG | + | chr1.3:60747958-60747977 | MS.gene20931:intron | 20.0% |
| !!! | TTTTGCCATCTTTTTTAATA+AGG | + | chr1.3:60747957-60747976 | MS.gene20931:intron | 20.0% |
| !!! | TTTTTATGGATTTTAAACTG+TGG | + | chr1.3:60751268-60751287 | MS.gene20931:intron | 20.0% |
| !!! | TTTTTGAGTAAATATACACA+TGG | - | chr1.3:60747392-60747411 | None:intergenic | 20.0% |
| ! | AACTCAAAAAACAACTTGTA+AGG | - | chr1.3:60751030-60751049 | None:intergenic | 25.0% |
| ! | AAGTGAATTTAGAAAACTAG+AGG | + | chr1.3:60748802-60748821 | MS.gene20931:intron | 25.0% |
| ! | AATCAAAGATTTCATGATTC+AGG | + | chr1.3:60750189-60750208 | MS.gene20931:CDS | 25.0% |
| ! | AATGTTAACGGAAAATTAAC+GGG | - | chr1.3:60748288-60748307 | None:intergenic | 25.0% |
| ! | AGCGTACTAACAAAATATAA+CGG | - | chr1.3:60750245-60750264 | None:intergenic | 25.0% |
| ! | AGTGAATTTAGAAAACTAGA+GGG | + | chr1.3:60748803-60748822 | MS.gene20931:intron | 25.0% |
| ! | ATAAGAATTAGATAGTAACC+TGG | - | chr1.3:60749223-60749242 | None:intergenic | 25.0% |
| ! | ATACATTTGTCCTTAACTAT+AGG | - | chr1.3:60747303-60747322 | None:intergenic | 25.0% |
| ! | ATCAAAGATTTCATGATTCA+GGG | + | chr1.3:60750190-60750209 | MS.gene20931:CDS | 25.0% |
| ! | ATTATTTGGAGAAAGTTTCT+GGG | + | chr1.3:60748361-60748380 | MS.gene20931:intron | 25.0% |
| ! | CATATTATTAAAACTTGGGT+TGG | - | chr1.3:60751057-60751076 | None:intergenic | 25.0% |
| ! | CCATTAAAAATTACGTGATT+TGG | + | chr1.3:60749780-60749799 | MS.gene20931:intron | 25.0% |
| ! | CTGTAAATGTACATTGTTAA+TGG | + | chr1.3:60749560-60749579 | MS.gene20931:intron | 25.0% |
| ! | GTCTATATGATGATAACTTA+AGG | - | chr1.3:60748242-60748261 | None:intergenic | 25.0% |
| ! | TCATATTTCTCTTATGTTAG+TGG | + | chr1.3:60747898-60747917 | MS.gene20931:intron | 25.0% |
| ! | TGCAATCAAAGTCAATAAAA+AGG | - | chr1.3:60751475-60751494 | None:intergenic | 25.0% |
| ! | TGGTTGAAATGCTAAATATT+AGG | - | chr1.3:60751564-60751583 | None:intergenic | 25.0% |
| ! | TGTAGAAAATTTCAATTTGG+GGG | + | chr1.3:60748566-60748585 | MS.gene20931:intron | 25.0% |
| ! | TTCTCAAAAAGTTGTGATTA+TGG | - | chr1.3:60747861-60747880 | None:intergenic | 25.0% |
| ! | TTGACAATTTAACATCAACA+GGG | + | chr1.3:60751423-60751442 | MS.gene20931:intron | 25.0% |
| ! | TTGACATCGTTAAAAAAGAA+GGG | + | chr1.3:60748775-60748794 | MS.gene20931:intron | 25.0% |
| ! | TTGACCTACTGAAAAAATAA+AGG | + | chr1.3:60751308-60751327 | MS.gene20931:intron | 25.0% |
| ! | TTGTATTATATATACGCACA+CGG | - | chr1.3:60747428-60747447 | None:intergenic | 25.0% |
| ! | TTTGACAATTTAACATCAAC+AGG | + | chr1.3:60751422-60751441 | MS.gene20931:intron | 25.0% |
| ! | TTTGACATCGTTAAAAAAGA+AGG | + | chr1.3:60748774-60748793 | MS.gene20931:intron | 25.0% |
| !! | AAAATTTTGGATAGCCAATT+CGG | + | chr1.3:60749817-60749836 | MS.gene20931:intron | 25.0% |
| !! | AACAATTTTGCATGATTTCA+AGG | - | chr1.3:60751847-60751866 | None:intergenic | 25.0% |
| !! | ACAATTTTGCATGATTTCAA+GGG | - | chr1.3:60751846-60751865 | None:intergenic | 25.0% |
| !! | ACACGGCAAATAATATTTTA+CGG | - | chr1.3:60747721-60747740 | None:intergenic | 25.0% |
| !! | AGAGCATATTTTCTTAAACA+TGG | + | chr1.3:60747926-60747945 | MS.gene20931:intron | 25.0% |
| !! | ATTAAGGTGTTTATTCAAAC+AGG | - | chr1.3:60749269-60749288 | None:intergenic | 25.0% |
| !! | ATTGGTTTCATTATCTTACA+TGG | + | chr1.3:60749854-60749873 | MS.gene20931:intron | 25.0% |
| !! | ATTTCGTTTGCAGAAAATTT+TGG | + | chr1.3:60749804-60749823 | MS.gene20931:intron | 25.0% |
| !! | CAGTATTAAAAGTTTTGCTT+TGG | + | chr1.3:60750452-60750471 | MS.gene20931:intron | 25.0% |
| !! | CATATTTTCTTAAACATGGA+GGG | + | chr1.3:60747930-60747949 | MS.gene20931:intron | 25.0% |
| !! | CATTTTTCTTCTTGAAAGAA+TGG | + | chr1.3:60747457-60747476 | MS.gene20931:intron | 25.0% |
| !! | CCAAATCACGTAATTTTTAA+TGG | - | chr1.3:60749783-60749802 | None:intergenic | 25.0% |
| !! | CCTGTTTTCCATTATAAAAT+TGG | + | chr1.3:60748417-60748436 | MS.gene20931:intron | 25.0% |
| !! | GTTTTCTTTGATGTAGTTAT+TGG | + | chr1.3:60749925-60749944 | MS.gene20931:CDS | 25.0% |
| !! | TACTTTAAGAATCAGATAAG+GGG | + | chr1.3:60750688-60750707 | MS.gene20931:intron | 25.0% |
| !! | TCATCATCCCAATTTTATAA+TGG | - | chr1.3:60748428-60748447 | None:intergenic | 25.0% |
| !! | TCCTAAAAAAATGGCAATTT+TGG | + | chr1.3:60747783-60747802 | MS.gene20931:intron | 25.0% |
| !! | TTAAGGTGTTTATTCAAACA+GGG | - | chr1.3:60749268-60749287 | None:intergenic | 25.0% |
| !!! | AAAAGTACAGACTTTTAGTT+AGG | - | chr1.3:60751252-60751271 | None:intergenic | 25.0% |
| !!! | AAAATTGCCATTTTTTTAGG+AGG | - | chr1.3:60747784-60747803 | None:intergenic | 25.0% |
| !!! | AATATGTTTTAATTGGATGC+AGG | + | chr1.3:60750317-60750336 | MS.gene20931:intron | 25.0% |
| !!! | ATATGTTTTAATTGGATGCA+GGG | + | chr1.3:60750318-60750337 | MS.gene20931:intron | 25.0% |
| !!! | ATTTTTTATTTGCACTGTAC+CGG | + | chr1.3:60750641-60750660 | MS.gene20931:CDS | 25.0% |
| !!! | CCAATTTTATAATGGAAAAC+AGG | - | chr1.3:60748420-60748439 | None:intergenic | 25.0% |
| !!! | CTAAAAGTCTGTACTTTTTA+TGG | + | chr1.3:60751254-60751273 | MS.gene20931:intron | 25.0% |
| !!! | CTGGAAATGTATTTTTAAGT+GGG | + | chr1.3:60750992-60751011 | MS.gene20931:intron | 25.0% |
| !!! | GTTTCATTTTAATAAACCTC+AGG | - | chr1.3:60748182-60748201 | None:intergenic | 25.0% |
| !!! | TACAAGTTGTTTTTTGAGTT+AGG | + | chr1.3:60751030-60751049 | MS.gene20931:intron | 25.0% |
| !!! | TGTATGTTTTAAAACTAGAG+GGG | - | chr1.3:60748211-60748230 | None:intergenic | 25.0% |
| !!! | TGTTAAGTTGACAACTTTTA+AGG | + | chr1.3:60747357-60747376 | MS.gene20931:intron | 25.0% |
| !!! | TTCATTTTAATAAACCTCAG+GGG | - | chr1.3:60748180-60748199 | None:intergenic | 25.0% |
| !!! | TTGCCATCTTTTTTAATAAG+GGG | + | chr1.3:60747959-60747978 | MS.gene20931:intron | 25.0% |
| AAAAAACAACTTGTAAGGTG+AGG | - | chr1.3:60751025-60751044 | None:intergenic | 30.0% | |
| AAAAACAACTTGTAAGGTGA+GGG | - | chr1.3:60751024-60751043 | None:intergenic | 30.0% | |
| AAAAAGTTGCTTGTTTGTCA+TGG | + | chr1.3:60749136-60749155 | MS.gene20931:intron | 30.0% | |
| AACTATAGGATTCTTCTCAA+GGG | - | chr1.3:60747289-60747308 | None:intergenic | 30.0% | |
| ACATATACACATGATGCTAA+GGG | + | chr1.3:60750272-60750291 | MS.gene20931:intron | 30.0% | |
| AGAGACTATAATTGCATTTG+TGG | - | chr1.3:60751362-60751381 | None:intergenic | 30.0% | |
| AGCAACAAGACAATATTGAT+GGG | - | chr1.3:60748452-60748471 | None:intergenic | 30.0% | |
| AGTAAATATACACATGGTGT+TGG | - | chr1.3:60747386-60747405 | None:intergenic | 30.0% | |
| ATAATTGCATTTGTGGGATT+GGG | - | chr1.3:60751355-60751374 | None:intergenic | 30.0% | |
| ATATGATGATAACTTAAGGG+AGG | - | chr1.3:60748238-60748257 | None:intergenic | 30.0% | |
| ATGCTATAAGCTGCAAATTA+AGG | - | chr1.3:60749285-60749304 | None:intergenic | 30.0% | |
| ATGTTAACGGAAAATTAACG+GGG | - | chr1.3:60748287-60748306 | None:intergenic | 30.0% | |
| ATTTGGGGGAGTAAATAATA+AGG | + | chr1.3:60748580-60748599 | MS.gene20931:intron | 30.0% | |
| CAATTGCTACAATGTTATCT+TGG | + | chr1.3:60751389-60751408 | MS.gene20931:intron | 30.0% | |
| CCACTTAAAAATACATTTCC+AGG | - | chr1.3:60750994-60751013 | None:intergenic | 30.0% | |
| CTGAAAAAATAAAGGCTTGA+CGG | + | chr1.3:60751316-60751335 | MS.gene20931:intron | 30.0% | |
| GAGACTATAATTGCATTTGT+GGG | - | chr1.3:60751361-60751380 | None:intergenic | 30.0% | |
| GATTATTTGGAGAAAGTTTC+TGG | + | chr1.3:60748360-60748379 | MS.gene20931:intron | 30.0% | |
| GTGAATTTAGAAAACTAGAG+GGG | + | chr1.3:60748804-60748823 | MS.gene20931:intron | 30.0% | |
| GTTTAAAGGACGCTAAAATT+TGG | + | chr1.3:60748386-60748405 | MS.gene20931:intron | 30.0% | |
| TAACTATAGGATTCTTCTCA+AGG | - | chr1.3:60747290-60747309 | None:intergenic | 30.0% | |
| TACATATACACATGATGCTA+AGG | + | chr1.3:60750271-60750290 | MS.gene20931:intron | 30.0% | |
| TATAATTGCATTTGTGGGAT+TGG | - | chr1.3:60751356-60751375 | None:intergenic | 30.0% | |
| TCATGCAAAATTGTTAACTC+TGG | + | chr1.3:60751852-60751871 | MS.gene20931:CDS | 30.0% | |
| TGAAATCTTTGATTATGCGA+TGG | - | chr1.3:60750183-60750202 | None:intergenic | 30.0% | |
| TGAATTTAGAAAACTAGAGG+GGG | + | chr1.3:60748805-60748824 | MS.gene20931:intron | 30.0% | |
| TGACCCCTTATTAAAAAAGA+TGG | - | chr1.3:60747965-60747984 | None:intergenic | 30.0% | |
| TGAGAAGAATCCTATAGTTA+AGG | + | chr1.3:60747290-60747309 | MS.gene20931:intron | 30.0% | |
| TTCATCTTCAACATTGTCTT+TGG | + | chr1.3:60747164-60747183 | MS.gene20931:CDS | 30.0% | |
| TTCTTTGATGTAGTTATTGG+AGG | + | chr1.3:60749928-60749947 | MS.gene20931:CDS | 30.0% | |
| ! | AACCAATACCCCATATTTTA+GGG | - | chr1.3:60747690-60747709 | None:intergenic | 30.0% |
| ! | CACGGCAAATAATATTTTAC+GGG | - | chr1.3:60747720-60747739 | None:intergenic | 30.0% |
| ! | GCATAAGAATGTGTTACTAA+AGG | + | chr1.3:60749534-60749553 | MS.gene20931:intron | 30.0% |
| ! | GCATATTTTCTTAAACATGG+AGG | + | chr1.3:60747929-60747948 | MS.gene20931:intron | 30.0% |
| ! | TAACCAATACCCCATATTTT+AGG | - | chr1.3:60747691-60747710 | None:intergenic | 30.0% |
| ! | TATGAGTATTGTGGTGAAAT+TGG | + | chr1.3:60750072-60750091 | MS.gene20931:intron | 30.0% |
| ! | TCAGAGTTTATACTTGTTAG+CGG | + | chr1.3:60748725-60748744 | MS.gene20931:intron | 30.0% |
| ! | TTTTCATGTTGTAGACTTCA+TGG | + | chr1.3:60751724-60751743 | MS.gene20931:intron | 30.0% |
| !! | CAACTTTTTGAGAAGATAAG+AGG | + | chr1.3:60747867-60747886 | MS.gene20931:intron | 30.0% |
| !! | CCTGGAAATGTATTTTTAAG+TGG | + | chr1.3:60750991-60751010 | MS.gene20931:intron | 30.0% |
| !!! | CAAGCCTTTATTTTTTCAGT+AGG | - | chr1.3:60751315-60751334 | None:intergenic | 30.0% |
| !!! | CGCAACATTTTGAAACTTAA+GGG | + | chr1.3:60747989-60748008 | MS.gene20931:intron | 30.0% |
| !!! | GACAAACAAGCAACTTTTTT+GGG | - | chr1.3:60749135-60749154 | None:intergenic | 30.0% |
| !!! | GCCAAAATTGCCATTTTTTT+AGG | - | chr1.3:60747787-60747806 | None:intergenic | 30.0% |
| !!! | TCGCAACATTTTGAAACTTA+AGG | + | chr1.3:60747988-60748007 | MS.gene20931:intron | 30.0% |
| !!! | TGACAAACAAGCAACTTTTT+TGG | - | chr1.3:60749136-60749155 | None:intergenic | 30.0% |
| !!! | TTTTTTTGGGTCTTGTTAAC+CGG | - | chr1.3:60748926-60748945 | None:intergenic | 30.0% |
| AAAGATTTCATGATTCAGGG+AGG | + | chr1.3:60750193-60750212 | MS.gene20931:CDS | 35.0% | |
| AAGATTTCATGATTCAGGGA+GGG | + | chr1.3:60750194-60750213 | MS.gene20931:CDS | 35.0% | |
| AAGCGAAATCAATCACTTCT+CGG | + | chr1.3:60749721-60749740 | MS.gene20931:CDS | 35.0% | |
| AATGTGGCACAAAACTTTCT+AGG | - | chr1.3:60749107-60749126 | None:intergenic | 35.0% | |
| AATTGACTGCCGTTACTATT+AGG | - | chr1.3:60750624-60750643 | None:intergenic | 35.0% | |
| ACATCGTTAAAAAAGAAGGG+AGG | + | chr1.3:60748778-60748797 | MS.gene20931:intron | 35.0% | |
| ACTATAGGATTCTTCTCAAG+GGG | - | chr1.3:60747288-60747307 | None:intergenic | 35.0% | |
| AGGAGATAAAGAAAATGGGA+AGG | + | chr1.3:60748600-60748619 | MS.gene20931:intron | 35.0% | |
| AGGGTTGTTGTACATCAAAA+TGG | + | chr1.3:60748620-60748639 | MS.gene20931:intron | 35.0% | |
| ATCTTTGATTATGCGATGGA+AGG | - | chr1.3:60750179-60750198 | None:intergenic | 35.0% | |
| ATCTTTGTTCTCAACACAGT+TGG | + | chr1.3:60749160-60749179 | MS.gene20931:intron | 35.0% | |
| ATGACAATTTACTGCATCCA+AGG | - | chr1.3:60749656-60749675 | None:intergenic | 35.0% | |
| CATTACTTCAGAAGAACTAC+GGG | - | chr1.3:60748489-60748508 | None:intergenic | 35.0% | |
| GAAAATTAACGGGGTTAACA+TGG | - | chr1.3:60748278-60748297 | None:intergenic | 35.0% | |
| GAGCAACAAGACAATATTGA+TGG | - | chr1.3:60748453-60748472 | None:intergenic | 35.0% | |
| GCATTACTTCAGAAGAACTA+CGG | - | chr1.3:60748490-60748509 | None:intergenic | 35.0% | |
| GGAGATAAAGAAAATGGGAA+GGG | + | chr1.3:60748601-60748620 | MS.gene20931:intron | 35.0% | |
| GGGTTGTTGTACATCAAAAT+GGG | + | chr1.3:60748621-60748640 | MS.gene20931:intron | 35.0% | |
| GTATTTGGACATGTCATTGA+TGG | + | chr1.3:60751765-60751784 | MS.gene20931:CDS | 35.0% | |
| TCACTTCAGCTGAAACTTAT+AGG | - | chr1.3:60749039-60749058 | None:intergenic | 35.0% | |
| TGAAGATGAACACAGAAACA+TGG | - | chr1.3:60747154-60747173 | None:intergenic | 35.0% | |
| TGACATGTCCAAATACAACA+TGG | - | chr1.3:60751761-60751780 | None:intergenic | 35.0% | |
| TGAGTCAACTAGGGATTATT+TGG | + | chr1.3:60748347-60748366 | MS.gene20931:intron | 35.0% | |
| TGCTAGTGTCCCTAAAATAT+GGG | + | chr1.3:60747678-60747697 | MS.gene20931:intron | 35.0% | |
| TGTTGTACATCAAAATGGGA+CGG | + | chr1.3:60748625-60748644 | MS.gene20931:intron | 35.0% | |
| TTTGAGAATAATAACCGTGC+AGG | + | chr1.3:60750124-60750143 | MS.gene20931:intron | 35.0% | |
| ! | AAAGTTTCTGGGCAGTTTAA+AGG | + | chr1.3:60748372-60748391 | MS.gene20931:intron | 35.0% |
| ! | AATAATCCCTAGTTGACTCA+TGG | - | chr1.3:60748347-60748366 | None:intergenic | 35.0% |
| ! | AGGATTGTTATTGGCCTATT+TGG | + | chr1.3:60749964-60749983 | MS.gene20931:CDS | 35.0% |
| ! | ATAATCCCTAGTTGACTCAT+GGG | - | chr1.3:60748346-60748365 | None:intergenic | 35.0% |
| ! | ATAGGCTGTGTGTTTCATTT+TGG | - | chr1.3:60751209-60751228 | None:intergenic | 35.0% |
| ! | CGGAAATTCTCAACTGTTTT+GGG | - | chr1.3:60750000-60750019 | None:intergenic | 35.0% |
| ! | CTTTTCGCCTCCTAAAAAAA+TGG | + | chr1.3:60747774-60747793 | MS.gene20931:intron | 35.0% |
| ! | GAAAACCTTGCTTGTTACTT+TGG | - | chr1.3:60749911-60749930 | None:intergenic | 35.0% |
| ! | TCGGAAATTCTCAACTGTTT+TGG | - | chr1.3:60750001-60750020 | None:intergenic | 35.0% |
| ! | TCTTTTTACTGGACTGTCAA+TGG | + | chr1.3:60750506-60750525 | MS.gene20931:intron | 35.0% |
| ! | TTGTCGTTGTATGAGTATTG+TGG | + | chr1.3:60750063-60750082 | MS.gene20931:intron | 35.0% |
| !! | ATTTTAATAAACCTCAGGGG+AGG | - | chr1.3:60748177-60748196 | None:intergenic | 35.0% |
| !!! | AAACAAGCAACTTTTTTGGG+TGG | - | chr1.3:60749132-60749151 | None:intergenic | 35.0% |
| !!! | ACTTTTTTGGGTGGAAAATG+TGG | - | chr1.3:60749123-60749142 | None:intergenic | 35.0% |
| !!! | CTTTTTTTGGGTTCCTTAAC+CGG | + | chr1.3:60748897-60748916 | MS.gene20931:intron | 35.0% |
| AACCACGCGTGTTATCTAAA+AGG | - | chr1.3:60749011-60749030 | None:intergenic | 40.0% | |
| AACTTCCTCTAGATGGTTGA+AGG | + | chr1.3:60751877-60751896 | MS.gene20931:CDS | 40.0% | |
| AAGAACAAATTGGGAGCCAT+TGG | + | chr1.3:60748687-60748706 | MS.gene20931:intron | 40.0% | |
| AATGCCGGTCCTAATAGTAA+CGG | + | chr1.3:60750612-60750631 | MS.gene20931:CDS | 40.0% | |
| ACACAGAAACATGGAATCAC+CGG | - | chr1.3:60747145-60747164 | None:intergenic | 40.0% | |
| ACGTTAAATGAGATATGGCC+TGG | + | chr1.3:60750973-60750992 | MS.gene20931:intron | 40.0% | |
| ACTCGAGTGTGAAGAAGATT+AGG | + | chr1.3:60749074-60749093 | MS.gene20931:intron | 40.0% | |
| AGATGGGAAAATAGTCTCAC+CGG | - | chr1.3:60750663-60750682 | None:intergenic | 40.0% | |
| AGATTTCATGATTCAGGGAG+GGG | + | chr1.3:60750195-60750214 | MS.gene20931:CDS | 40.0% | |
| AGGCCATATCTCATTTAACG+TGG | - | chr1.3:60750974-60750993 | None:intergenic | 40.0% | |
| ATGAACCCATGAGTCAACTA+GGG | + | chr1.3:60748338-60748357 | MS.gene20931:intron | 40.0% | |
| ATTAACGGGGTTAACATGGA+AGG | - | chr1.3:60748274-60748293 | None:intergenic | 40.0% | |
| CATGTTGTAGACTTCATGGT+TGG | + | chr1.3:60751728-60751747 | MS.gene20931:intron | 40.0% | |
| CGTCGTATAAGTAAACCTCA+GGG | + | chr1.3:60748834-60748853 | MS.gene20931:intron | 40.0% | |
| GACAATCGCCATGTTGTATT+TGG | + | chr1.3:60751750-60751769 | MS.gene20931:CDS | 40.0% | |
| GCTAGTGTCCCTAAAATATG+GGG | + | chr1.3:60747679-60747698 | MS.gene20931:intron | 40.0% | |
| GGATGCAGTAAATTGTCATC+AGG | + | chr1.3:60749657-60749676 | MS.gene20931:CDS | 40.0% | |
| GGCCATATCTCATTTAACGT+GGG | - | chr1.3:60750973-60750992 | None:intergenic | 40.0% | |
| GTCATCAGGATATCATTACG+CGG | + | chr1.3:60749671-60749690 | MS.gene20931:CDS | 40.0% | |
| GTCCCACGTTAAATGAGATA+TGG | + | chr1.3:60750968-60750987 | MS.gene20931:intron | 40.0% | |
| GTCCCTAAAATATGGGGTAT+TGG | + | chr1.3:60747685-60747704 | MS.gene20931:intron | 40.0% | |
| GTCGTATAAGTAAACCTCAG+GGG | + | chr1.3:60748835-60748854 | MS.gene20931:intron | 40.0% | |
| GTGCTAGTGTCCCTAAAATA+TGG | + | chr1.3:60747677-60747696 | MS.gene20931:intron | 40.0% | |
| TATGAACCCATGAGTCAACT+AGG | + | chr1.3:60748337-60748356 | MS.gene20931:intron | 40.0% | |
| TCGGCTGTGATTCAAAACAT+TGG | + | chr1.3:60749836-60749855 | MS.gene20931:intron | 40.0% | |
| TCTGCTGGAAGGATTGTTAT+TGG | + | chr1.3:60749955-60749974 | MS.gene20931:CDS | 40.0% | |
| TGAGTACATGAAACTGATGG+TGG | + | chr1.3:60748648-60748667 | MS.gene20931:intron | 40.0% | |
| TGGACATGTCATTGATGGAA+TGG | + | chr1.3:60751770-60751789 | MS.gene20931:CDS | 40.0% | |
| TGGGAACAACATCTCCAAAT+AGG | - | chr1.3:60749981-60750000 | None:intergenic | 40.0% | |
| TGTCGTAACTGGTTGTAACA+CGG | + | chr1.3:60747200-60747219 | MS.gene20931:CDS | 40.0% | |
| TTAACGGGGTTAACATGGAA+GGG | - | chr1.3:60748273-60748292 | None:intergenic | 40.0% | |
| TTGATGGAATGGATGTTGTG+AGG | + | chr1.3:60751781-60751800 | MS.gene20931:CDS | 40.0% | |
| TTTAATTGGATGCAGGGAAC+TGG | + | chr1.3:60750324-60750343 | MS.gene20931:intron | 40.0% | |
| TTTGATTATGCGATGGAAGG+TGG | - | chr1.3:60750176-60750195 | None:intergenic | 40.0% | |
| ! | ATCCTTTTAGATAACACGCG+TGG | + | chr1.3:60749006-60749025 | MS.gene20931:intron | 40.0% |
| ! | CAGCATTGAAACCAGAAAGA+AGG | - | chr1.3:60749199-60749218 | None:intergenic | 40.0% |
| ! | GAGTTTATACTTGTTAGCGG+CGG | + | chr1.3:60748728-60748747 | MS.gene20931:intron | 40.0% |
| ! | GTGATTATGGTCCCTGTTTT+GGG | - | chr1.3:60747848-60747867 | None:intergenic | 40.0% |
| ! | TGTGATTATGGTCCCTGTTT+TGG | - | chr1.3:60747849-60747868 | None:intergenic | 40.0% |
| !! | GTTTTGAATCACAGCCGAAT+TGG | - | chr1.3:60749834-60749853 | None:intergenic | 40.0% |
| !! | TACATGGCTGTGTTACTTCT+AGG | + | chr1.3:60749870-60749889 | MS.gene20931:intron | 40.0% |
| AAAATGTTAACCGGTGCCTC+CGG | + | chr1.3:60748048-60748067 | MS.gene20931:intron | 45.0% | |
| AAGGGGAATCCTTCTGTGTT+TGG | + | chr1.3:60750705-60750724 | MS.gene20931:intron | 45.0% | |
| AATAACCGTGCAGGAGAGAA+AGG | + | chr1.3:60750133-60750152 | MS.gene20931:intron | 45.0% | |
| ACTGCCGTTACTATTAGGAC+CGG | - | chr1.3:60750619-60750638 | None:intergenic | 45.0% | |
| ACTGGTGGAGTCAGTATCTA+TGG | + | chr1.3:60750342-60750361 | MS.gene20931:CDS | 45.0% | |
| AGGGGAATCCTTCTGTGTTT+GGG | + | chr1.3:60750706-60750725 | MS.gene20931:intron | 45.0% | |
| CAGAGTCAGAACCTTCTTTC+TGG | + | chr1.3:60749185-60749204 | MS.gene20931:intron | 45.0% | |
| CATATCCTTTCTCTCCTGCA+CGG | - | chr1.3:60750141-60750160 | None:intergenic | 45.0% | |
| CCTGTTTACCCAAACACAGA+AGG | - | chr1.3:60750717-60750736 | None:intergenic | 45.0% | |
| CCTTCTGTGTTTGGGTAAAC+AGG | + | chr1.3:60750714-60750733 | MS.gene20931:intron | 45.0% | |
| CGGTGAGTACATGAAACTGA+TGG | + | chr1.3:60748645-60748664 | MS.gene20931:intron | 45.0% | |
| GAGACAAGCAGCTACAACAA+TGG | + | chr1.3:60751819-60751838 | MS.gene20931:CDS | 45.0% | |
| GCAAGCCAAAGTAACAAGCA+AGG | + | chr1.3:60749903-60749922 | MS.gene20931:CDS | 45.0% | |
| GCGTCGTATAAGTAAACCTC+AGG | + | chr1.3:60748833-60748852 | MS.gene20931:intron | 45.0% | |
| GGTTGTAACACGGGAGATAA+TGG | + | chr1.3:60747210-60747229 | MS.gene20931:CDS | 45.0% | |
| GTATAAGTAAACCTCAGGGG+AGG | + | chr1.3:60748838-60748857 | MS.gene20931:intron | 45.0% | |
| GTCGTAACTGGTTGTAACAC+GGG | + | chr1.3:60747201-60747220 | MS.gene20931:CDS | 45.0% | |
| GTTATTGGAGGTGAATCTGC+TGG | + | chr1.3:60749940-60749959 | MS.gene20931:CDS | 45.0% | |
| TAATAAACCTCAGGGGAGGT+GGG | - | chr1.3:60748173-60748192 | None:intergenic | 45.0% | |
| TACTTCAGAAGAACTACGGG+AGG | - | chr1.3:60748486-60748505 | None:intergenic | 45.0% | |
| TCTGGAGAACTTCCTCTAGA+TGG | + | chr1.3:60751870-60751889 | MS.gene20931:CDS | 45.0% | |
| TGTTTCCTTAACGAGTGCTC+CGG | - | chr1.3:60748070-60748089 | None:intergenic | 45.0% | |
| TTAATAAACCTCAGGGGAGG+TGG | - | chr1.3:60748174-60748193 | None:intergenic | 45.0% | |
| TTCCTTGCAGTGAAGCATGT+TGG | + | chr1.3:60750567-60750586 | MS.gene20931:intron | 45.0% | |
| TTTGCCATGCTCAAAACTCC+AGG | - | chr1.3:60750594-60750613 | None:intergenic | 45.0% | |
| ! | AATTTCCGAGCTTTGTGCAC+AGG | + | chr1.3:60750012-60750031 | MS.gene20931:CDS | 45.0% |
| ! | GGTGTCTTCTCGGCAATTTT+GGG | - | chr1.3:60747819-60747838 | None:intergenic | 45.0% |
| ! | TGGTGTCTTCTCGGCAATTT+TGG | - | chr1.3:60747820-60747839 | None:intergenic | 45.0% |
| !! | GTTTTGAGCATGGCAAATGC+CGG | + | chr1.3:60750597-60750616 | MS.gene20931:CDS | 45.0% |
| !! | TTCTGGTTTCAATGCTGTCC+AGG | + | chr1.3:60749202-60749221 | MS.gene20931:CDS | 45.0% |
| !!! | CGGCAATTTTGGGACGAAAT+GGG | - | chr1.3:60747809-60747828 | None:intergenic | 45.0% |
| !!! | TCGGCAATTTTGGGACGAAA+TGG | - | chr1.3:60747810-60747829 | None:intergenic | 45.0% |
| !! | AAAATTAAAGTAAAAAAAAA+AGG | + | chr1.3:60747741-60747760 | MS.gene20931:intron | 5.0% |
| !!! | TTTGAATTAATTTTTTTTTT+GGG | - | chr1.3:60748939-60748958 | None:intergenic | 5.0% |
| AATTACACTGACCTCCCCTG+AGG | - | chr1.3:60748852-60748871 | None:intergenic | 50.0% | |
| AATTGGATGCAGGGAACTGG+TGG | + | chr1.3:60750327-60750346 | MS.gene20931:intron | 50.0% | |
| ACACCACGTGTCCCAAAACA+GGG | + | chr1.3:60747834-60747853 | MS.gene20931:intron | 50.0% | |
| CAGGATATCATTACGCGGCT+AGG | + | chr1.3:60749676-60749695 | MS.gene20931:CDS | 50.0% | |
| CGTGCAGGAGAGAAAGGATA+TGG | + | chr1.3:60750139-60750158 | MS.gene20931:intron | 50.0% | |
| CTTGTAACAAGCAGGGACCT+TGG | - | chr1.3:60747116-60747135 | None:intergenic | 50.0% | |
| GACCAACATGCTTCACTGCA+AGG | - | chr1.3:60750572-60750591 | None:intergenic | 50.0% | |
| GCTTACCTGTGCACAAAGCT+CGG | - | chr1.3:60750020-60750039 | None:intergenic | 50.0% | |
| GGTGGAGTCAGTATCTATGG+TGG | + | chr1.3:60750345-60750364 | MS.gene20931:CDS | 50.0% | |
| TCATTACGCGGCTAGGCTTT+CGG | + | chr1.3:60749683-60749702 | MS.gene20931:CDS | 50.0% | |
| TGTGAGGACACTTGAGTCAC+AGG | + | chr1.3:60751797-60751816 | MS.gene20931:CDS | 50.0% | |
| TTGGAGGTGAATCTGCTGGA+AGG | + | chr1.3:60749944-60749963 | MS.gene20931:CDS | 50.0% | |
| ! | CAAGGTCCCTGCTTGTTACA+AGG | + | chr1.3:60747114-60747133 | MS.gene20931:CDS | 50.0% |
| ! | GTGCAGCCTTGTAACAAGCA+GGG | - | chr1.3:60747123-60747142 | None:intergenic | 50.0% |
| ! | TGCTTGTTACAAGGCTGCAC+CGG | + | chr1.3:60747123-60747142 | MS.gene20931:CDS | 50.0% |
| ! | TGTTAACCGGACACCGGTTA+AGG | - | chr1.3:60748913-60748932 | None:intergenic | 50.0% |
| !!! | TGGTCCTGGAGTTTTGAGCA+TGG | + | chr1.3:60750587-60750606 | MS.gene20931:CDS | 50.0% |
| AATTACACCCACCTCCCCTG+AGG | + | chr1.3:60748163-60748182 | MS.gene20931:intron | 55.0% | |
| ACGGGGTTAACATGGAAGGG+AGG | - | chr1.3:60748270-60748289 | None:intergenic | 55.0% | |
| ACTGCATCCAAGGTGTGCTC+TGG | - | chr1.3:60749646-60749665 | None:intergenic | 55.0% | |
| AGCAGTACCAGAGCACACCT+TGG | + | chr1.3:60749636-60749655 | MS.gene20931:CDS | 55.0% | |
| CAGAAGAACTACGGGAGGCT+TGG | - | chr1.3:60748481-60748500 | None:intergenic | 55.0% | |
| GACACCACGTGTCCCAAAAC+AGG | + | chr1.3:60747833-60747852 | MS.gene20931:intron | 55.0% | |
| GCAACTGCTGCTGTCGTAAC+TGG | + | chr1.3:60747189-60747208 | MS.gene20931:CDS | 55.0% | |
| GCAGTGAAGCATGTTGGTCC+TGG | + | chr1.3:60750573-60750592 | MS.gene20931:intron | 55.0% | |
| TGGGACACGTGGTGTCTTCT+CGG | - | chr1.3:60747829-60747848 | None:intergenic | 55.0% | |
| TGGGTTCCTTAACCGGTGTC+CGG | + | chr1.3:60748904-60748923 | MS.gene20931:intron | 55.0% | |
| TTCCTTAACGAGTGCTCCGG+AGG | - | chr1.3:60748067-60748086 | None:intergenic | 55.0% | |
| ! | ACTTGTTAGCGGCGGAAGAC+TGG | + | chr1.3:60748736-60748755 | MS.gene20931:intron | 55.0% |
| ! | GGTGCAGCCTTGTAACAAGC+AGG | - | chr1.3:60747124-60747143 | None:intergenic | 55.0% |
| !! | GGGTCTTGTTAACCGGACAC+CGG | - | chr1.3:60748919-60748938 | None:intergenic | 55.0% |
| CAGGGAGGGGACTTCACAGA+AGG | + | chr1.3:60750208-60750227 | MS.gene20931:CDS | 60.0% | |
| ! | TGCCTCCGGAGCACTCGTTA+AGG | + | chr1.3:60748062-60748081 | MS.gene20931:intron | 60.0% |
| !!! | GGTCCCTGTTTTGGGACACG+TGG | - | chr1.3:60747840-60747859 | None:intergenic | 60.0% |
| GTGTGTGTGTGTGCGCGTGC+TGG | - | chr1.3:60751584-60751603 | None:intergenic | 65.0% | |
| ! | AACGAGTGCTCCGGAGGCAC+CGG | - | chr1.3:60748061-60748080 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60747108 | 60751896 | 60747108 | ID=MS.gene20931 |
| chr1.3 | mRNA | 60747108 | 60751896 | 60747108 | ID=MS.gene20931.t1;Parent=MS.gene20931 |
| chr1.3 | exon | 60747108 | 60747269 | 60747108 | ID=MS.gene20931.t1.exon1;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60747108 | 60747269 | 60747108 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60749188 | 60749223 | 60749188 | ID=MS.gene20931.t1.exon2;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60749188 | 60749223 | 60749188 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60749615 | 60749770 | 60749615 | ID=MS.gene20931.t1.exon3;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60749615 | 60749770 | 60749615 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60749892 | 60750033 | 60749892 | ID=MS.gene20931.t1.exon4;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60749892 | 60750033 | 60749892 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60750146 | 60750234 | 60750146 | ID=MS.gene20931.t1.exon5;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60750146 | 60750234 | 60750146 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60750339 | 60750393 | 60750339 | ID=MS.gene20931.t1.exon6;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60750339 | 60750393 | 60750339 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60750577 | 60750662 | 60750577 | ID=MS.gene20931.t1.exon7;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60750577 | 60750662 | 60750577 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| chr1.3 | exon | 60751738 | 60751896 | 60751738 | ID=MS.gene20931.t1.exon8;Parent=MS.gene20931.t1 |
| chr1.3 | CDS | 60751738 | 60751896 | 60751738 | ID=cds.MS.gene20931.t1;Parent=MS.gene20931.t1 |
| Gene Sequence |
| Protein sequence |
