AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07114


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07114.t1 MTR_7g108590 97.092 447 11 2 1 446 1 446 0.0 877
MS.gene07114.t1 MTR_7g108590 96.639 357 10 2 1 356 1 356 0.0 698
MS.gene07114.t1 MTR_7g108590 96.639 357 10 2 1 356 1 356 0.0 697
MS.gene07114.t1 MTR_1g069240 33.588 262 154 3 183 444 84 325 4.61e-40 146
MS.gene07114.t1 MTR_8g088420 40.698 86 51 0 75 160 224 309 8.26e-11 63.5
MS.gene07114.t1 MTR_8g088420 40.698 86 51 0 75 160 221 306 8.41e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07114.t1 AT1G02910 79.948 384 77 0 63 446 70 453 0.0 627
MS.gene07114.t1 AT1G02910 80.272 294 58 0 63 356 70 363 2.47e-168 478
MS.gene07114.t1 AT4G28740 30.282 284 159 5 170 444 86 339 1.66e-34 132

Find 0 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAATAGATTAAAGATT+AGG + 51683:13287-13306 None:intergenic 10.0%
!! TTATTATTGAGATTAATTAA+AGG - 51683:13301-13320 MS.gene07114:CDS 10.0%
!!! AAAATGTTTTGATAAACTTA+TGG + 51683:11632-11651 None:intergenic 15.0%
!!! TCAAATTAATTTTACATCTT+AGG - 51683:13953-13972 MS.gene07114:intron 15.0%
!! AAGATAAAACACATAAAGAT+GGG + 51683:12193-12212 None:intergenic 20.0%
!! AATAATAATTACCAACTCAA+AGG + 51683:11419-11438 None:intergenic 20.0%
!! ATCTACATATACTAATAGAT+AGG - 51683:14405-14424 MS.gene07114:CDS 20.0%
!! CAATAAATTTATAAAACCAG+TGG + 51683:11364-11383 None:intergenic 20.0%
!! GATAAAAAACACAACTTTAA+AGG + 51683:11141-11160 None:intergenic 20.0%
!! GTCAAATAAGTGAATAAAAA+CGG + 51683:11509-11528 None:intergenic 20.0%
!! TAAGATAAAACACATAAAGA+TGG + 51683:12194-12213 None:intergenic 20.0%
!! TAATTAACCATCTTAAACTA+TGG + 51683:11332-11351 None:intergenic 20.0%
!! TCAAATAAGTGAATAAAAAC+GGG + 51683:11508-11527 None:intergenic 20.0%
!! TTTGGATAAATAGCTTAAAT+AGG - 51683:13981-14000 MS.gene07114:intron 20.0%
!!! AAAACCTTTCTTTTCAATTT+TGG + 51683:12992-13011 None:intergenic 20.0%
!!! AAAATTGAAAAGAAAGGTTT+TGG - 51683:12991-13010 MS.gene07114:CDS 20.0%
!!! AACATTTTGAAAACAACTTA+TGG + 51683:11608-11627 None:intergenic 20.0%
!!! AGTAACCATAAAATTTTGTT+AGG - 51683:13123-13142 MS.gene07114:intron 20.0%
!!! ATCTTCCTAACAAAATTTTA+TGG + 51683:13131-13150 None:intergenic 20.0%
!!! GATGTAAAGTTATTTTAAAC+TGG + 51683:13462-13481 None:intergenic 20.0%
!!! TAAAGTTGTGTTTTTTATCA+TGG - 51683:11142-11161 MS.gene07114:intron 20.0%
!!! TTTTTTGCAATGAATTAATG+TGG - 51683:11303-11322 MS.gene07114:intron 20.0%
! AAAATAACATAGATACTGAC+CGG + 51683:12765-12784 None:intergenic 25.0%
! AAAATCTACTCTCAACATTT+GGG - 51683:13860-13879 MS.gene07114:intron 25.0%
! AAATGACAATTCTACATGAA+TGG + 51683:13753-13772 None:intergenic 25.0%
! AATAAATTATACCCTTCCTT+TGG + 51683:11068-11087 None:intergenic 25.0%
! AATGACAATTCTACATGAAT+GGG + 51683:13752-13771 None:intergenic 25.0%
! ATCTCGTTATCATTTAAATG+AGG - 51683:13500-13519 MS.gene07114:intron 25.0%
! ATGAAAAAATAAAGAGCAGA+AGG + 51683:12807-12826 None:intergenic 25.0%
! ATTAGGCGATTCAATTAAAT+AGG + 51683:13270-13289 None:intergenic 25.0%
! CATTTAAATGAGGAGAAAAT+TGG - 51683:13510-13529 MS.gene07114:intron 25.0%
! GAAACCAAAATTGAAAAGAA+AGG - 51683:12985-13004 MS.gene07114:CDS 25.0%
! TAAAATCTACTCTCAACATT+TGG - 51683:13859-13878 MS.gene07114:intron 25.0%
! TAATGCGTGTTAATTTAACT+AGG - 51683:13591-13610 MS.gene07114:intron 25.0%
! TATATGTAGATTACTCAAAG+TGG + 51683:14396-14415 None:intergenic 25.0%
! TCAAACTATGATGTTTAAGT+GGG - 51683:11114-11133 MS.gene07114:intron 25.0%
! TCACAAATTTATGAAAGCAA+TGG + 51683:11443-11462 None:intergenic 25.0%
! TCTTATGTGTTTATGCTAAT+AGG + 51683:11541-11560 None:intergenic 25.0%
! TTAAGCTATTTATCCAAACA+GGG + 51683:13979-13998 None:intergenic 25.0%
! TTAATTAGTAGTAATTCCAC+TGG - 51683:11345-11364 MS.gene07114:intron 25.0%
! TTCAAACTATGATGTTTAAG+TGG - 51683:11113-11132 MS.gene07114:intron 25.0%
! TTGTCCAATAAAAGTTATGT+TGG - 51683:11464-11483 MS.gene07114:intron 25.0%
! TTTAAGCTATTTATCCAAAC+AGG + 51683:13980-13999 None:intergenic 25.0%
!! AAACACATAAGAGTATGTTA+GGG - 51683:11549-11568 MS.gene07114:intron 25.0%
!! AATGTTTTCATAAGCTATAG+TGG + 51683:11744-11763 None:intergenic 25.0%
!! AGGGAATACAATCTAAAATT+TGG - 51683:12055-12074 MS.gene07114:intron 25.0%
!! TAAACACATAAGAGTATGTT+AGG - 51683:11548-11567 MS.gene07114:intron 25.0%
!! TTTTATGGCATTATTCCTTT+GGG - 51683:12617-12636 MS.gene07114:CDS 25.0%
!! TTTTTATGGCATTATTCCTT+TGG - 51683:12616-12635 MS.gene07114:CDS 25.0%
!!! AATTTGATTTTGAGAAGCAT+AGG + 51683:10865-10884 None:intergenic 25.0%
!!! CAATGATTTTTGCTTTTATG+TGG - 51683:11867-11886 MS.gene07114:intron 25.0%
!!! TGTTTGTTGTTTTTATGAAG+AGG - 51683:11992-12011 MS.gene07114:intron 25.0%
CAAAATTGAAAGCTGAAGTT+AGG - 51683:13185-13204 MS.gene07114:intron 30.0%
CCAATAAAAGTTATGTTGGT+AGG - 51683:11468-11487 MS.gene07114:intron 30.0%
TAAATTAACACGCATTAGCA+TGG + 51683:13588-13607 None:intergenic 30.0%
TCACGAGATGAAAAATATTC+CGG + 51683:14295-14314 None:intergenic 30.0%
TTGCTTAAAATTGCTTCCAT+TGG + 51683:14483-14502 None:intergenic 30.0%
! AAGCTATAGTGGAAAACTTA+TGG + 51683:11733-11752 None:intergenic 30.0%
! CCTACCAACATAACTTTTAT+TGG + 51683:11471-11490 None:intergenic 30.0%
! GTGATTTTCCTTTTAAGCAT+TGG - 51683:12568-12587 MS.gene07114:intron 30.0%
! GTTGGTAGGAATAGTATTTA+CGG - 51683:11482-11501 MS.gene07114:intron 30.0%
! TTTTAGATCTCTTCGAAAAC+TGG + 51683:12294-12313 None:intergenic 30.0%
! TTTTTCACCTCCAATGTTAA+CGG + 51683:12483-12502 None:intergenic 30.0%
!! TCATTGACTAAAGTCTTGTT+TGG + 51683:11853-11872 None:intergenic 30.0%
!!! CAATTTTGATTGTGCAGTTA+CGG + 51683:13173-13192 None:intergenic 30.0%
!!! CATTTTTTGCTTAGAAGAGA+AGG + 51683:13081-13100 None:intergenic 30.0%
!!! GGTTTTAGGTTATAATAGCT+GGG - 51683:12857-12876 MS.gene07114:CDS 30.0%
!!! TGCAGGTATTGTTGTTTTTA+TGG - 51683:12602-12621 MS.gene07114:CDS 30.0%
!!! TTGTTTTTATGAAGAGGAGA+AGG - 51683:11998-12017 MS.gene07114:intron 30.0%
!!! TTTTTTATCATGGATTCCTC+AGG - 51683:11152-11171 MS.gene07114:intron 30.0%
AAATGATGAAGAGGAATGCA+TGG + 51683:10908-10927 None:intergenic 35.0%
AACAAACTAACTCAATCAGC+CGG - 51683:14273-14292 MS.gene07114:CDS 35.0%
AATTCTCAATGATCCAGACT+TGG - 51683:12081-12100 MS.gene07114:intron 35.0%
ACAAACAACATCCAGATTAG+AGG + 51683:11975-11994 None:intergenic 35.0%
ACTATGAGCATCATTACACA+AGG - 51683:13798-13817 MS.gene07114:intron 35.0%
ATAACCTAAAACCGAAACCT+CGG + 51683:12850-12869 None:intergenic 35.0%
ATAAGTCATCACAGCAAGAA+AGG + 51683:13889-13908 None:intergenic 35.0%
ATAGATAGGAATGCATTTGC+AGG - 51683:14419-14438 MS.gene07114:CDS 35.0%
ATTCAAAGAACTGCAAGAAG+AGG - 51683:12126-12145 MS.gene07114:CDS 35.0%
ATTGAGCTGAAATGATGAAG+AGG + 51683:10917-10936 None:intergenic 35.0%
CTTAAAATTGCTTCCATTGG+CGG + 51683:14480-14499 None:intergenic 35.0%
GAATGTTCTATGTTTAACCG+AGG - 51683:12830-12849 MS.gene07114:intron 35.0%
GATTGATGTCAACTAAGAGT+TGG - 51683:13554-13573 MS.gene07114:intron 35.0%
GCATCAACATAATGAAAGTG+TGG - 51683:13532-13551 MS.gene07114:intron 35.0%
GCTGAATCTTGTGTCAATTT+GGG - 51683:11028-11047 MS.gene07114:intron 35.0%
GTGGATTCCATAGTTTAAGA+TGG - 51683:11322-11341 MS.gene07114:intron 35.0%
TAGATAGGAATGCATTTGCA+GGG - 51683:14420-14439 MS.gene07114:CDS 35.0%
TCTATGTTTAACCGAGGTTT+CGG - 51683:12836-12855 MS.gene07114:intron 35.0%
TCTCGCAAACAATCTTACTA+GGG - 51683:14228-14247 MS.gene07114:intron 35.0%
TCTTGCAGTTCTTTGAATTC+AGG + 51683:12124-12143 None:intergenic 35.0%
TGCGTGTTAATTTAACTAGG+TGG - 51683:13594-13613 MS.gene07114:intron 35.0%
TGCTGAATCTTGTGTCAATT+TGG - 51683:11027-11046 MS.gene07114:intron 35.0%
TTACATACTGTGAGATGGTA+AGG - 51683:11939-11958 MS.gene07114:intron 35.0%
TTGGAGGTGAAAAACAATTC+AGG - 51683:12489-12508 MS.gene07114:intron 35.0%
TTGGGACAATAAAAAAGAGG+AGG - 51683:12635-12654 MS.gene07114:CDS 35.0%
!! AAGAAAGTGCTGTTTCAAAC+TGG + 51683:11194-11213 None:intergenic 35.0%
!! ATCTTGATAGCGTCTCATTT+CGG + 51683:12680-12699 None:intergenic 35.0%
!! CCTTTGGGACAATAAAAAAG+AGG - 51683:12632-12651 MS.gene07114:CDS 35.0%
!! TGAGCTATTTTCCAAAGGAA+GGG - 51683:11054-11073 MS.gene07114:intron 35.0%
!! TGCTGATTCCAATGCTTAAA+AGG + 51683:12579-12598 None:intergenic 35.0%
!! TTGAGCTATTTTCCAAAGGA+AGG - 51683:11053-11072 MS.gene07114:intron 35.0%
!!! CCTCTTTTTTATTGTCCCAA+AGG + 51683:12635-12654 None:intergenic 35.0%
!!! CGGTTTTAGGTTATAATAGC+TGG - 51683:12856-12875 MS.gene07114:CDS 35.0%
!!! CGTTATTTTTTGATGTACCG+AGG - 51683:12393-12412 MS.gene07114:CDS 35.0%
AAGCTATCTTGGAGAGCTTA+TGG - 51683:14119-14138 MS.gene07114:CDS 40.0%
AAGTTCAAGCACCATTTCGT+GGG - 51683:12324-12343 MS.gene07114:CDS 40.0%
AATCTCCTAATCCCACGAAA+TGG + 51683:12338-12357 None:intergenic 40.0%
ACATAATACTGCGCCTAGAT+GGG - 51683:13666-13685 MS.gene07114:intron 40.0%
AGAGATCAACAGAAGTCTGA+AGG - 51683:13620-13639 MS.gene07114:intron 40.0%
AGGATATTGCGTGCAATTCA+AGG - 51683:12413-12432 MS.gene07114:CDS 40.0%
ATATTGCGTGCAATTCAAGG+GGG - 51683:12416-12435 MS.gene07114:CDS 40.0%
CATTGGAATCAGCAATATGC+AGG - 51683:12585-12604 MS.gene07114:CDS 40.0%
CTCTCGCAAACAATCTTACT+AGG - 51683:14227-14246 MS.gene07114:intron 40.0%
GAAAGCTGAAGTTAGGTTCA+AGG - 51683:13192-13211 MS.gene07114:intron 40.0%
GATATTGCGTGCAATTCAAG+GGG - 51683:12415-12434 MS.gene07114:CDS 40.0%
GCATTCTATGACCTTTGAGT+TGG - 51683:11405-11424 MS.gene07114:intron 40.0%
GGATATTGCGTGCAATTCAA+GGG - 51683:12414-12433 MS.gene07114:CDS 40.0%
GTGACTTACATACTGTGAGA+TGG - 51683:11934-11953 MS.gene07114:intron 40.0%
TACATAATACTGCGCCTAGA+TGG - 51683:13665-13684 MS.gene07114:intron 40.0%
TCCTCAGGTTAAAGATGCTT+TGG - 51683:11167-11186 MS.gene07114:intron 40.0%
TGAATTGCACGCAATATCCT+CGG + 51683:12413-12432 None:intergenic 40.0%
TTAGGGAGAGGTTATAGAAG+CGG - 51683:11566-11585 MS.gene07114:intron 40.0%
TTTACATCTTAGGCCCTGTT+TGG - 51683:13963-13982 MS.gene07114:intron 40.0%
TTTGAATCCGAATCCTGTTG+AGG - 51683:11212-11231 MS.gene07114:intron 40.0%
TTTGTTAGTTCCGGTCATCT+GGG - 51683:12951-12970 MS.gene07114:CDS 40.0%
! ACCAAAGCATCTTTAACCTG+AGG + 51683:11171-11190 None:intergenic 40.0%
! CATAAGAGTATGTTAGGGAG+AGG - 51683:11554-11573 MS.gene07114:intron 40.0%
! GCAGTTTGAGTTTCAGTTTC+TGG + 51683:11010-11029 None:intergenic 40.0%
! GCTGCTTTCATAAGCTATCT+TGG - 51683:14108-14127 MS.gene07114:CDS 40.0%
! GGAAGCAATTTTAAGCAAGC+TGG - 51683:14485-14504 MS.gene07114:CDS 40.0%
! TCATAGAATGCAGACTAGTC+TGG + 51683:11396-11415 None:intergenic 40.0%
! TTAACCGAGGTTTCGGTTTT+AGG - 51683:12843-12862 MS.gene07114:intron 40.0%
! TTGTCTTGTCGAGTTGTGAT+TGG + 51683:13365-13384 None:intergenic 40.0%
! TTTTGTTAGTTCCGGTCATC+TGG - 51683:12950-12969 MS.gene07114:CDS 40.0%
!! CATAGAATGCAGACTAGTCT+GGG + 51683:11395-11414 None:intergenic 40.0%
!! GGTCTTGAGCTATTTTCCAA+AGG - 51683:11049-11068 MS.gene07114:intron 40.0%
!! TCTTGATAGCGTCTCATTTC+GGG + 51683:12679-12698 None:intergenic 40.0%
AAGCACCATTTCGTGGGATT+AGG - 51683:12330-12349 MS.gene07114:CDS 45.0%
AATGCTGCCGTTAACATTGG+AGG - 51683:12473-12492 MS.gene07114:intron 45.0%
AGTTGAACTCGTGCAGCTAA+GGG - 51683:12728-12747 MS.gene07114:intron 45.0%
ATGTACACGTCTTCACCAAC+TGG + 51683:13650-13669 None:intergenic 45.0%
ATTTGCAGGGTATACCTGAC+TGG - 51683:14433-14452 MS.gene07114:CDS 45.0%
CCAGATATCTTGGAAACTGC+TGG - 51683:12449-12468 MS.gene07114:CDS 45.0%
CCAGCAGTTTCCAAGATATC+TGG + 51683:12452-12471 None:intergenic 45.0%
CTAACAAAACACCGCGTCTA+AGG + 51683:12939-12958 None:intergenic 45.0%
GAAGTTCAAGCACCATTTCG+TGG - 51683:12323-12342 MS.gene07114:CDS 45.0%
TAGTTGAACTCGTGCAGCTA+AGG - 51683:12727-12746 MS.gene07114:intron 45.0%
TCAAGTCTCACCCCAATAGA+TGG + 51683:13045-13064 None:intergenic 45.0%
TGAAGTTAGGTTCAAGGCTG+AGG - 51683:13198-13217 MS.gene07114:CDS 45.0%
TGACTGGGACCAAATTGCAA+AGG - 51683:14449-14468 MS.gene07114:CDS 45.0%
TGTACACGTCTTCACCAACT+GGG + 51683:13649-13668 None:intergenic 45.0%
TGTATTCCCTCAAAGCAGTG+CGG + 51683:12045-12064 None:intergenic 45.0%
TTGTTAGTTCCGGTCATCTG+GGG - 51683:12952-12971 MS.gene07114:CDS 45.0%
TTTGCAATTTGGTCCCAGTC+AGG + 51683:14450-14469 None:intergenic 45.0%
TTTGCAGGGTATACCTGACT+GGG - 51683:14434-14453 MS.gene07114:CDS 45.0%
! CAACTACGCGATTAGTTGAC+AGG + 51683:12713-12732 None:intergenic 45.0%
! GAATTCAGGCAAAGCTCTGA+AGG + 51683:12110-12129 None:intergenic 45.0%
! GGAGAAGAGCATGAAATGAG+TGG + 51683:10977-10996 None:intergenic 45.0%
! GTCGAGTTGTGATTGGTTGT+TGG + 51683:13358-13377 None:intergenic 45.0%
!! AAGCTTGCTGTCATGCATAC+AGG - 51683:11256-11275 MS.gene07114:intron 45.0%
!! ACGCGGTGTTTTGTTAGTTC+CGG - 51683:12942-12961 MS.gene07114:CDS 45.0%
!! AGGTTTTGGCCTTCAACCAA+AGG - 51683:13005-13024 MS.gene07114:CDS 45.0%
!! AGTGACTTTAGCTTTGCGCA+AGG - 51683:12891-12910 MS.gene07114:CDS 45.0%
!! TCAGTTTCTGGTGTCTGTGA+TGG + 51683:10998-11017 None:intergenic 45.0%
AAGTCTGAAGGAGTCCCAGT+TGG - 51683:13632-13651 MS.gene07114:intron 50.0%
ATCTTCGAACTCGCCCATCT+AGG + 51683:13682-13701 None:intergenic 50.0%
ATGGGCGAGTTCGAAGATCA+GGG - 51683:13684-13703 MS.gene07114:intron 50.0%
ATTGTCTCCGCACTGCTTTG+AGG - 51683:12035-12054 MS.gene07114:intron 50.0%
CAAAGCAGTGCGGAGACAAT+CGG + 51683:12035-12054 None:intergenic 50.0%
CCCAATAGATGGAAGAGCCT+CGG + 51683:13034-13053 None:intergenic 50.0%
CCGAGGCTCTTCCATCTATT+GGG - 51683:13031-13050 MS.gene07114:CDS 50.0%
CGAGGCTCTTCCATCTATTG+GGG - 51683:13032-13051 MS.gene07114:CDS 50.0%
GAATTGTTGCGCTGCAACCA+TGG + 51683:10843-10862 None:intergenic 50.0%
GCAAGTGAGCACCTCTAATC+TGG - 51683:11961-11980 MS.gene07114:intron 50.0%
GCGGAAGCTCCTTTGCAATT+TGG + 51683:14461-14480 None:intergenic 50.0%
GCTTGTGCCTCAACAGGATT+CGG + 51683:11222-11241 None:intergenic 50.0%
GGCAATGCTGCCGTTAACAT+TGG - 51683:12470-12489 MS.gene07114:intron 50.0%
GTAGCATTTACAGCAGCTGC+AGG - 51683:12365-12384 MS.gene07114:CDS 50.0%
TGACGGTGCTCCAGATATCT+TGG - 51683:12439-12458 MS.gene07114:CDS 50.0%
TGCAGCTAAGGGACACAGTT+AGG - 51683:12739-12758 MS.gene07114:intron 50.0%
TTGTCTCCGCACTGCTTTGA+GGG - 51683:12036-12055 MS.gene07114:intron 50.0%
! AAGTACCGTTCCCATTCTGC+TGG + 51683:13232-13251 None:intergenic 50.0%
! CGATTAGTTGACAGGCGCAA+AGG + 51683:12705-12724 None:intergenic 50.0%
! TGCTTTTCTGCCACGTTACC+AGG - 51683:12241-12260 MS.gene07114:intron 50.0%
!! TTCAGGCAAAGCTCTGAAGG+AGG + 51683:12107-12126 None:intergenic 50.0%
AACGCAGCTTGTGCCTCAAC+AGG + 51683:11228-11247 None:intergenic 55.0%
CGTGCAATTCAAGGGGGTGA+CGG - 51683:12422-12441 MS.gene07114:CDS 55.0%
CTACCTTCTCCCCAGATGAC+CGG + 51683:12964-12983 None:intergenic 55.0%
GATGGGCGAGTTCGAAGATC+AGG - 51683:13683-13702 MS.gene07114:intron 55.0%
GCCGAGGCTCTTCCATCTAT+TGG - 51683:13030-13049 MS.gene07114:CDS 55.0%
GCTAAGGGACACAGTTAGGC+CGG - 51683:12743-12762 MS.gene07114:intron 55.0%
TCTCGCCAGCAGAATGGGAA+CGG - 51683:13224-13243 MS.gene07114:CDS 55.0%
TGCAAAGGAGCTTCCGCCAA+TGG - 51683:14464-14483 MS.gene07114:CDS 55.0%
! CGCACTGATCTCCTTAGACG+CGG - 51683:12925-12944 MS.gene07114:CDS 55.0%
AGGCTGGGTGGGGAAGATGT+TGG - 51683:12266-12285 MS.gene07114:intron 60.0%
AGGCTGTCTCGCCAGCAGAA+TGG - 51683:13218-13237 MS.gene07114:CDS 60.0%
CCTCGGCAGCCTTTGGTTGA+AGG + 51683:13017-13036 None:intergenic 60.0%
CCTTCAACCAAAGGCTGCCG+AGG - 51683:13014-13033 MS.gene07114:CDS 60.0%
GGCTGTCTCGCCAGCAGAAT+GGG - 51683:13219-13238 MS.gene07114:CDS 60.0%
GTTCCGGTCATCTGGGGAGA+AGG - 51683:12958-12977 MS.gene07114:CDS 60.0%
TTCTGCCACGTTACCAGGCG+AGG - 51683:12246-12265 MS.gene07114:intron 60.0%
!! GCTCTGAAGGAGGCCAAGTC+TGG + 51683:12097-12116 None:intergenic 60.0%
CCACGTTACCAGGCGAGGCT+GGG - 51683:12251-12270 MS.gene07114:intron 65.0%
GGAAGAGCCTCGGCAGCCTT+TGG + 51683:13024-13043 None:intergenic 65.0%
GTTACCAGGCGAGGCTGGGT+GGG - 51683:12255-12274 MS.gene07114:intron 65.0%
TTACCAGGCGAGGCTGGGTG+GGG - 51683:12256-12275 MS.gene07114:intron 65.0%
CGTTACCAGGCGAGGCTGGG+TGG - 51683:12254-12273 MS.gene07114:intron 70.0%
GCCACGTTACCAGGCGAGGC+TGG - 51683:12250-12269 MS.gene07114:intron 70.0%
! CCCAGCCTCGCCTGGTAACG+TGG + 51683:12254-12273 None:intergenic 70.0%
CTTCCCCACCCAGCCTCGCC+TGG + 51683:12262-12281 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
51683 gene 10827 14515 10827 ID=MS.gene07114
51683 mRNA 10827 14515 10827 ID=MS.gene07114.t1;Parent=MS.gene07114
51683 exon 14267 14515 14267 ID=MS.gene07114.t1.exon1;Parent=MS.gene07114.t1
51683 CDS 14267 14515 14267 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 14065 14168 14065 ID=MS.gene07114.t1.exon2;Parent=MS.gene07114.t1
51683 CDS 14065 14168 14065 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 13195 13330 13195 ID=MS.gene07114.t1.exon3;Parent=MS.gene07114.t1
51683 CDS 13195 13330 13195 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 12848 13079 12848 ID=MS.gene07114.t1.exon4;Parent=MS.gene07114.t1
51683 CDS 12848 13079 12848 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 12578 12735 12578 ID=MS.gene07114.t1.exon5;Parent=MS.gene07114.t1
51683 CDS 12578 12735 12578 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 12289 12477 12289 ID=MS.gene07114.t1.exon6;Parent=MS.gene07114.t1
51683 CDS 12289 12477 12289 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 12097 12197 12097 ID=MS.gene07114.t1.exon7;Parent=MS.gene07114.t1
51683 CDS 12097 12197 12097 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 11633 11729 11633 ID=MS.gene07114.t1.exon8;Parent=MS.gene07114.t1
51683 CDS 11633 11729 11633 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
51683 exon 10827 10901 10827 ID=MS.gene07114.t1.exon9;Parent=MS.gene07114.t1
51683 CDS 10827 10901 10827 ID=cds.MS.gene07114.t1;Parent=MS.gene07114.t1
Gene Sequence

>MS.gene07114

ATGGTGGCAATGGCCATGGTTGCAGCGCAACAATTCCTATGCTTCTCAAAATCAAATTGTAGAATCACAACAACAAGACCATGCATTCCTCTTCATCATTTCAGCTCAATTCTTCTACGCTCACGCAATAACAAGAAGATTCAGTTTCCACTCATTTCATGCTCTTCTCCATCACAGACACCAGAAACTGAAACTCAAACTGCTGAATCTTGTGTCAATTTGGGTCTTGAGCTATTTTCCAAAGGAAGGGTATAATTTATTATCTTCAAAATTTTATCTTTTAGTATTCAAACTATGATGTTTAAGTGGGTCCTTTAAAGTTGTGTTTTTTATCATGGATTCCTCAGGTTAAAGATGCTTTGGTCCAGTTTGAAACAGCACTTTCTTTGAATCCGAATCCTGTTGAGGCACAAGCTGCGTTCTATAACAAAGCTTGCTGTCATGCATACAGGTATGAATTATAATATAATGCTATCTTTTTTGCAATGAATTAATGTGGATTCCATAGTTTAAGATGGTTAATTAGTAGTAATTCCACTGGTTTTATAAATTTATTGAAAATGCTCCCAGACTAGTCTGCATTCTATGACCTTTGAGTTGGTAATTATTATTTCCATTGCTTTCATAAATTTGTGATTTGTCCAATAAAAGTTATGTTGGTAGGAATAGTATTTACGGCCCGTTTTTATTCACTTATTTGACTTTAGTTTACCTATTAGCATAAACACATAAGAGTATGTTAGGGAGAGGTTATAGAAGCGGTTTATTTATGACATATCCATAAGTTGTTTTCAAAATGTTTCCATAAGTTTATCAAAACATTTTGACTTTATTTTATCTTTTGTTATAAGCGCTTATAACACAAATCTTATGTTATAACGCTAAAATAAAGTTAAAATGTTTCCATAAGTTTTCCACTATAGCTTATGAAAACATTTTGACTTTGTTTTATCTTTTCTTACAGAAATAAACTATACATAAGAACTTACATCTTATGTTATAAGCGCTTAACTAAGTTGTTATCCAAACAAGACTTTAGTCAATGATTTTTGCTTTTATGTGGTAGTTGTTTTAGTTCATTCAGACTCAACACACTACTCGAGTCTTGTGACTTACATACTGTGAGATGGTAAGGCAAGTGAGCACCTCTAATCTGGATGTTGTTTGTTTGTTGTTTTTATGAAGAGGAGAAGGAAAGAAAGCTGCCGATTGTCTCCGCACTGCTTTGAGGGAATACAATCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCCTTCAGAGCTTTGCCTGAATTCAAAGAACTGCAAGAAGAGGTGCTATAATTAGTTCTCAAAGATTTTATGATGCTAAGTTGTCCCATCTTTATGTGTTTTATCTTAGTTGTCAAAAACTACATTGATTCTTTATGCTTTTCTGCCACGTTACCAGGCGAGGCTGGGTGGGGAAGATGTTGGCTCCAGTTTTCGAAGAGATCTAAAACTTATCAGTGAAGTTCAAGCACCATTTCGTGGGATTAGGAGATTCTTTTACGTAGCATTTACAGCAGCTGCAGGAATATCGTTATTTTTTGATGTACCGAGGATATTGCGTGCAATTCAAGGGGGTGACGGTGCTCCAGATATCTTGGAAACTGCTGGCAATGCTGCCGTTAACATTGGAGGTGAAAAACAATTCAGGTTCAGTTTATATATTTGTTGCATTTAGTGTTTTACTTTTTGTTTTTGTGTGTGTCTGTGATTTTCCTTTTAAGCATTGGAATCAGCAATATGCAGGTATTGTTGTTTTTATGGCATTATTCCTTTGGGACAATAAAAAAGAGGAGGAGCAGATTGCGCAAATATCCCGAAATGAGACGCTATCAAGATTGCCTTTGCGCCTGTCAACTAATCGCGTAGTTGAACTCGTGCAGCTAAGGGACACAGTTAGGCCGGTCAGTATCTATGTTATTTTTTCTTCTGTTTTCTCTTTACCTTCTGCTCTTTATTTTTTCATTGTGAATGTTCTATGTTTAACCGAGGTTTCGGTTTTAGGTTATAATAGCTGGGAAAAAAGAAACAGTGACTTTAGCTTTGCGCAAGGCAGAGAGATTTCGCACTGATCTCCTTAGACGCGGTGTTTTGTTAGTTCCGGTCATCTGGGGAGAAGGTAGAGAAACCAAAATTGAAAAGAAAGGTTTTGGCCTTCAACCAAAGGCTGCCGAGGCTCTTCCATCTATTGGGGTGAGACTTGATATAACAACAAAACCTTCTCTTCTAAGCAAAAAATGTTGTTTCTTTCATGAGATGCAAAGTAACCATAAAATTTTGTTAGGAAGATTTTGAGAAGCGAACACAGTCCGTAACTGCACAATCAAAATTGAAAGCTGAAGTTAGGTTCAAGGCTGAGGCTGTCTCGCCAGCAGAATGGGAACGGTACTTAGTTTCAAATTCTTGCCTATTTAATTGAATCGCCTAATCTTTAATCTATTTATTATTGAGATTAATTAAAGGATATGTACTGTGAGTGTAAAATTATTTTACACCAACAACCAATCACAACTCGACAAGACAACATACAATTAAACAACTACTTATATTTAAAAACTTTAAAGATGATGCGACAAATTGAAGAGTTGTGATTAGATGCCAGTTTAAAATAACTTTACATCGAGAGTGCACATCTCTTAATCTCGTTATCATTTAAATGAGGAGAAAATTGGCATCAACATAATGAAAGTGTGGATTGATGTCAACTAAGAGTTGGTAATAGCTCCATGCTAATGCGTGTTAATTTAACTAGGTGGATAAGAGATCAACAGAAGTCTGAAGGAGTCCCAGTTGGTGAAGACGTGTACATAATACTGCGCCTAGATGGGCGAGTTCGAAGATCAGGGAGAGTAAGTGCAATTTCAGAGCAGACTTATTTTGCTTTTATTCCCATTCATGTAGAATTGTCATTTATTAGCTTGCTAAATGTCAACAAAAACTATGAGCATCATTACACAAGGATAAGACTTGATTAACAGAATTGAATTTTAAGAATTATTAAAATCTACTCTCAACATTTGGGATGCCTTTCTTGCTGTGATGACTTATTTGCAATTTGCAAAACTTGATGATCGCGCAAAAACTGCTGCATTTCAAATTAATTTTACATCTTAGGCCCTGTTTGGATAAATAGCTTAAATAGGCGCTAGTAGTATAAGCGCTCTGCTTATCATATAAGTGCTTATTTATGAGTTATTTCTATAACAACAGATAAAATAAAGTTAAACTGTTTTTATATTAGTTATAAGCTGCTTTCATAAGCTATCTTGGAGAGCTTATGGAAATAAGCTGAAAATAACTTATGAAGTTATGAGCATGTCATAAGATGTATGAAGTTATGAGCATGTCATAAGATGTTTACATACACTCTCGCAAACAATCTTACTAGGGCTCATGTCACTAGATAATCTTAAACAAACTAACTCAATCAGCCGGAATATTTTTCATCTCGTGATATTATTATTAAATATTGCATATCAACTATAAACTGTTTACAAAGCAGTTTTATTGCAGTACTATTTCTCATACTCTGCCACTTTGAGTAATCTACATATACTAATAGATAGGAATGCATTTGCAGGGTATACCTGACTGGGACCAAATTGCAAAGGAGCTTCCGCCAATGGAAGCAATTTTAAGCAAGCTGGAAAGATGA

Protein sequence

>MS.gene07114.t1

MVAMAMVAAQQFLCFSKSNCRITTTRPCIPLHHFSSILLRSRNNKKIQFPLISCSSPSQTPETETQTAESCVNLGLELFSKGRVKDALVQFETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAADCLRTALREYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDVGSSFRRDLKLISEVQAPFRGIRRFFYVAFTAAAGISLFFDVPRILRAIQGGDGAPDILETAGNAAVNIGGIVVFMALFLWDNKKEEEQIAQISRNETLSRLPLRLSTNRVVELVQLRDTVRPVIIAGKKETVTLALRKAERFRTDLLRRGVLLVPVIWGEGRETKIEKKGFGLQPKAAEALPSIGEDFEKRTQSVTAQSKLKAEVRFKAEAVSPAEWERWIRDQQKSEGVPVGEDVYIILRLDGRVRRSGRGIPDWDQIAKELPPMEAILSKLER