Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27498.t1 | XP_013449253.1 | 95.1 | 411 | 20 | 0 | 1 | 411 | 81 | 491 | 1.10E-219 | 772.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27498.t1 | Q9LZV4 | 74.2 | 414 | 100 | 2 | 2 | 409 | 82 | 494 | 7.4e-172 | 604.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27498.t1 | A0A072UBQ7 | 95.1 | 411 | 20 | 0 | 1 | 411 | 81 | 491 | 8.0e-220 | 772.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene27498 | 0.862814 | 3.88E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene27498 | 0.810674 | 1.02E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene27498 | 0.842066 | 3.24E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene27498 | 0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene049284 | MS.gene27498 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene27498 | 0.818681 | 1.73E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene27498 | 0.816167 | 6.36E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene27498 | 0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene27498 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene27498 | 0.844573 | 6.95E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene27498 | 0.879244 | 1.46E-69 | -1.69E-46 |
| MS.gene049491 | MS.gene27498 | 0.839442 | 1.58E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene27498 | 0.849654 | 2.81E-60 | -1.69E-46 |
| MS.gene049614 | MS.gene27498 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene27498 | 0.862984 | 3.44E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene27498 | 0.851913 | 6.51E-61 | -1.69E-46 |
| MS.gene049805 | MS.gene27498 | 0.888929 | 3.82E-73 | -1.69E-46 |
| MS.gene050076 | MS.gene27498 | 0.855312 | 6.86E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene27498 | 0.81679 | 4.61E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene27498 | 0.811995 | 5.30E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene27498 | 0.815441 | 9.23E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene27498 | 0.844205 | 8.73E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene27498 | 0.865487 | 5.70E-65 | -1.69E-46 |
| MS.gene050444 | MS.gene27498 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene27498 | 0.825904 | 3.64E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene27498 | 0.841871 | 3.65E-58 | -1.69E-46 |
| MS.gene050538 | MS.gene27498 | 0.810471 | 1.13E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene27498 | 0.853726 | 1.98E-61 | -1.69E-46 |
| MS.gene050670 | MS.gene27498 | 0.846079 | 2.72E-59 | -1.69E-46 |
| MS.gene050686 | MS.gene27498 | 0.818669 | 1.74E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene27498 | 0.827655 | 1.39E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene27498 | 0.850912 | 1.25E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene27498 | 0.853821 | 1.86E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene27498 | 0.858183 | 9.81E-63 | -1.69E-46 |
| MS.gene050812 | MS.gene27498 | 0.814822 | 1.27E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene27498 | 0.816817 | 4.55E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene27498 | 0.82556 | 4.39E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene27498 | 0.836052 | 1.17E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene27498 | 0.868566 | 5.94E-66 | -1.69E-46 |
| MS.gene051228 | MS.gene27498 | 0.854423 | 1.24E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene27498 | 0.84869 | 5.22E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene27498 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene051605 | MS.gene27498 | 0.807207 | 5.66E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene27498 | 0.87967 | 1.03E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene27498 | 0.870909 | 1.02E-66 | -1.69E-46 |
| MS.gene051694 | MS.gene27498 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene27498 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene27498 | 0.847986 | 8.17E-60 | -1.69E-46 |
| MS.gene051877 | MS.gene27498 | 0.823613 | 1.26E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene27498 | 0.838674 | 2.50E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene27498 | 0.834257 | 3.33E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene27498 | 0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene27498 | 0.841697 | 4.06E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene27498 | 0.851006 | 1.18E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene27498 | 0.886849 | 2.39E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene27498 | 0.850284 | 1.88E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene27498 | 0.822961 | 1.79E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene27498 | 0.840299 | 9.45E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene27498 | 0.865714 | 4.83E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene27498 | 0.867678 | 1.15E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene27498 | 0.862528 | 4.75E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene27498 | 0.883497 | 4.27E-71 | -1.69E-46 |
| MS.gene052485 | MS.gene27498 | 0.855566 | 5.79E-62 | -1.69E-46 |
| MS.gene052501 | MS.gene27498 | 0.832677 | 8.25E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene27498 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene27498 | 0.827553 | 1.47E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene27498 | 0.833983 | 3.90E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene27498 | 0.814678 | 1.36E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene27498 | 0.809209 | 2.12E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene27498 | 0.801465 | 8.89E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene27498 | 0.820078 | 8.30E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene27498 | 0.906234 | 1.84E-80 | -1.69E-46 |
| MS.gene053104 | MS.gene27498 | 0.899836 | 1.34E-77 | -1.69E-46 |
| MS.gene053107 | MS.gene27498 | 0.807067 | 6.06E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene27498 | 0.825765 | 3.92E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene27498 | 0.838058 | 3.60E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene27498 | 0.850608 | 1.52E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene27498 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene27498 | 0.892217 | 1.94E-74 | -1.69E-46 |
| MS.gene053384 | MS.gene27498 | 0.827703 | 1.35E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene27498 | 0.856511 | 3.06E-62 | -1.69E-46 |
| MS.gene053557 | MS.gene27498 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene27498 | 0.824884 | 6.34E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene27498 | 0.854015 | 1.63E-61 | -1.69E-46 |
| MS.gene053813 | MS.gene27498 | 0.829318 | 5.50E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene27498 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene27498 | 0.846777 | 1.76E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene27498 | 0.834029 | 3.79E-56 | -1.69E-46 |
| MS.gene054376 | MS.gene27498 | 0.846702 | 1.84E-59 | -1.69E-46 |
| MS.gene054543 | MS.gene27498 | 0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene27498 | 0.814548 | 1.46E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene27498 | 0.848397 | 6.29E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene27498 | 0.854983 | 8.56E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene27498 | 0.853116 | 2.96E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene27498 | 0.856849 | 2.43E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene27498 | 0.845914 | 3.02E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene27498 | 0.883656 | 3.73E-71 | -1.69E-46 |
| MS.gene055116 | MS.gene27498 | 0.844805 | 6.02E-59 | -1.69E-46 |
| MS.gene055206 | MS.gene27498 | 0.86571 | 4.85E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene27498 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene055254 | MS.gene27498 | 0.820639 | 6.17E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene27498 | 0.84462 | 6.76E-59 | -1.69E-46 |
| MS.gene055289 | MS.gene27498 | 0.849857 | 2.47E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene27498 | 0.861741 | 8.29E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene27498 | 0.837104 | 6.33E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene27498 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene27498 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene27498 | 0.8721 | 4.12E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene27498 | 0.823734 | 1.18E-53 | -1.69E-46 |
| MS.gene055533 | MS.gene27498 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene055636 | MS.gene27498 | 0.807851 | 4.13E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene27498 | 0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene27498 | 0.839983 | 1.14E-57 | -1.69E-46 |
| MS.gene055896 | MS.gene27498 | 0.830267 | 3.23E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene27498 | 0.887212 | 1.74E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene27498 | 0.839041 | 2.01E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene27498 | -0.814577 | 1.44E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene27498 | 0.828829 | 7.23E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene27498 | 0.839777 | 1.29E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene27498 | 0.833506 | 5.13E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene27498 | 0.839066 | 1.98E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene27498 | 0.821065 | 4.92E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene27498 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene27498 | 0.823252 | 1.53E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene27498 | 0.870722 | 1.18E-66 | -1.69E-46 |
| MS.gene056549 | MS.gene27498 | 0.817396 | 3.37E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene27498 | 0.866954 | 1.95E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene27498 | 0.800477 | 1.42E-48 | -1.69E-46 |
| MS.gene05664 | MS.gene27498 | 0.818538 | 1.86E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene27498 | 0.831813 | 1.35E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene27498 | 0.817843 | 2.67E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene27498 | 0.828539 | 8.50E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene27498 | 0.848801 | 4.86E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene27498 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene27498 | 0.819783 | 9.69E-53 | -1.69E-46 |
| MS.gene057123 | MS.gene27498 | 0.87194 | 4.66E-67 | -1.69E-46 |
| MS.gene057124 | MS.gene27498 | 0.805496 | 1.30E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene27498 | 0.884766 | 1.45E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene27498 | 0.88834 | 6.44E-73 | -1.69E-46 |
| MS.gene057295 | MS.gene27498 | 0.844798 | 6.05E-59 | -1.69E-46 |
| MS.gene057310 | MS.gene27498 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene27498 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene05733 | MS.gene27498 | 0.828633 | 8.07E-55 | -1.69E-46 |
| MS.gene05735 | MS.gene27498 | 0.838913 | 2.17E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene27498 | 0.880235 | 6.49E-70 | -1.69E-46 |
| MS.gene057734 | MS.gene27498 | 0.816011 | 6.89E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene27498 | 0.821054 | 4.95E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene27498 | 0.830128 | 3.50E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene27498 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene27498 | 0.846997 | 1.53E-59 | -1.69E-46 |
| MS.gene057927 | MS.gene27498 | 0.828441 | 8.98E-55 | -1.69E-46 |
| MS.gene058006 | MS.gene27498 | 0.862637 | 4.40E-64 | -1.69E-46 |
| MS.gene058007 | MS.gene27498 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene27498 | 0.867015 | 1.87E-65 | -1.69E-46 |
| MS.gene058082 | MS.gene27498 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene27498 | 0.832965 | 7.00E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene27498 | 0.847698 | 9.81E-60 | -1.69E-46 |
| MS.gene058323 | MS.gene27498 | 0.822081 | 2.87E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene27498 | 0.809653 | 1.70E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene27498 | 0.82492 | 6.21E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene27498 | 0.839711 | 1.35E-57 | -1.69E-46 |
| MS.gene058459 | MS.gene27498 | 0.800967 | 1.12E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene27498 | 0.810323 | 1.22E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene27498 | 0.880309 | 6.11E-70 | -1.69E-46 |
| MS.gene058723 | MS.gene27498 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene058787 | MS.gene27498 | 0.818384 | 2.02E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene27498 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene05883 | MS.gene27498 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene27498 | -0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene058928 | MS.gene27498 | 0.874111 | 8.72E-68 | -1.69E-46 |
| MS.gene059029 | MS.gene27498 | 0.812793 | 3.55E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene27498 | 0.842569 | 2.39E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene27498 | 0.823887 | 1.09E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene27498 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene27498 | 0.810857 | 9.36E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene27498 | 0.882465 | 1.02E-70 | -1.69E-46 |
| MS.gene059366 | MS.gene27498 | 0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene27498 | 0.841911 | 3.57E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene27498 | 0.89926 | 2.36E-77 | -1.69E-46 |
| MS.gene059597 | MS.gene27498 | 0.862374 | 5.30E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene27498 | 0.814989 | 1.16E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene27498 | 0.854034 | 1.61E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene27498 | 0.811058 | 8.46E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene27498 | 0.882851 | 7.36E-71 | -1.69E-46 |
| MS.gene059692 | MS.gene27498 | 0.869512 | 2.93E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene27498 | 0.876056 | 1.89E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene27498 | 0.83084 | 2.34E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene27498 | 0.842183 | 3.02E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene27498 | 0.812382 | 4.36E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene27498 | 0.82134 | 4.25E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene27498 | 0.829477 | 5.04E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene27498 | 0.846927 | 1.60E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene27498 | 0.889005 | 3.57E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene27498 | 0.834351 | 3.15E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene27498 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene27498 | 0.864533 | 1.14E-64 | -1.69E-46 |
| MS.gene060482 | MS.gene27498 | 0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene060727 | MS.gene27498 | 0.80257 | 5.27E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene27498 | 0.8002 | 1.61E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene27498 | 0.915661 | 4.51E-85 | -1.69E-46 |
| MS.gene060818 | MS.gene27498 | 0.89855 | 4.75E-77 | -1.69E-46 |
| MS.gene060835 | MS.gene27498 | 0.837141 | 6.19E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene27498 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene27498 | 0.834889 | 2.31E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene27498 | 0.904093 | 1.76E-79 | -1.69E-46 |
| MS.gene061049 | MS.gene27498 | 0.84338 | 1.45E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene27498 | -0.846145 | 2.61E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene27498 | 0.818699 | 1.71E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene27498 | 0.816665 | 4.92E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene27498 | 0.888551 | 5.34E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27498.t1 | MTR_7g073530 | 97.810 | 411 | 9 | 0 | 1 | 411 | 81 | 491 | 0.0 | 830 |
| MS.gene27498.t1 | MTR_8g005720 | 78.554 | 415 | 71 | 3 | 1 | 411 | 86 | 486 | 0.0 | 611 |
| MS.gene27498.t1 | MTR_5g053450 | 40.102 | 394 | 195 | 9 | 6 | 392 | 106 | 465 | 6.01e-91 | 286 |
| MS.gene27498.t1 | MTR_7g073560 | 97.458 | 118 | 3 | 0 | 294 | 411 | 21 | 138 | 1.96e-77 | 236 |
| MS.gene27498.t1 | MTR_7g073610 | 97.458 | 118 | 3 | 0 | 294 | 411 | 21 | 138 | 1.96e-77 | 236 |
| MS.gene27498.t1 | MTR_7g073540 | 57.416 | 209 | 47 | 5 | 204 | 411 | 1 | 168 | 5.54e-62 | 197 |
| MS.gene27498.t1 | MTR_7g073580 | 87.234 | 47 | 6 | 0 | 204 | 250 | 1 | 47 | 5.13e-22 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27498.t1 | AT5G01920 | 74.155 | 414 | 100 | 2 | 2 | 409 | 82 | 494 | 0.0 | 606 |
| MS.gene27498.t1 | AT5G01920 | 74.155 | 414 | 100 | 2 | 2 | 409 | 82 | 494 | 0.0 | 606 |
| MS.gene27498.t1 | AT1G68830 | 39.599 | 399 | 200 | 9 | 16 | 406 | 101 | 466 | 1.92e-85 | 271 |
Find 83 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTAAACTCATTGATTT+TGG | 0.192635 | 7.2:-31162264 | MS.gene27498:CDS |
| CATAATTCTTTCCAATTCTA+AGG | 0.196310 | 7.2:+31162229 | None:intergenic |
| AGGAACTTGGCACATGTTTC+AGG | 0.208561 | 7.2:+31163071 | None:intergenic |
| CAAATCCTTGATAGTGATTC+TGG | 0.233558 | 7.2:-31161147 | MS.gene27498:CDS |
| TCTTCTTTCGGAACTTCTTT+TGG | 0.248855 | 7.2:+31161092 | None:intergenic |
| GCAAGACCAGGTGTTCTTAT+TGG | 0.255792 | 7.2:-31163799 | MS.gene27498:CDS |
| ATTGAAGGGGCTAAAGAATT+TGG | 0.281260 | 7.2:-31163137 | MS.gene27498:CDS |
| TGCTATTGATGCATATCTTT+TGG | 0.286774 | 7.2:-31163776 | MS.gene27498:CDS |
| GGATCCAAAGGTGTATAATT+AGG | 0.294817 | 7.2:+31162204 | None:intergenic |
| AATTCACAAAAGGTGGAAAA+TGG | 0.296536 | 7.2:-31163016 | MS.gene27498:CDS |
| GGATAAAGTCATTCTTAAAA+AGG | 0.305148 | 7.2:-31163569 | MS.gene27498:intron |
| TGCTTTGAAGAATTTCAATT+TGG | 0.305364 | 7.2:-31161235 | MS.gene27498:CDS |
| TGTTGTTTATTCTGCTGTTT+TGG | 0.310233 | 7.2:-31163656 | MS.gene27498:CDS |
| AAGGTGGAAAATGGCTTGTT+TGG | 0.317886 | 7.2:-31163007 | MS.gene27498:CDS |
| CAGAATCACTATCAAGGATT+TGG | 0.317958 | 7.2:+31161148 | None:intergenic |
| CAAAGCAGCTTGAGACCTTA+AGG | 0.325974 | 7.2:+31161251 | None:intergenic |
| AATTTGGAAATGAGGACATA+TGG | 0.340412 | 7.2:-31161219 | MS.gene27498:CDS |
| AGCAAAGCTGCAATTGGTTC+TGG | 0.351901 | 7.2:+31162126 | None:intergenic |
| TCACCACCTAGAAGAAAATA+AGG | 0.353507 | 7.2:+31161036 | None:intergenic |
| TTTGTTGTGGATAGTTTATC+TGG | 0.355447 | 7.2:-31163742 | MS.gene27498:CDS |
| AGATAAACGCTTTCTTCTTT+CGG | 0.357180 | 7.2:+31161080 | None:intergenic |
| TGTTCCTAATTATACACCTT+TGG | 0.363051 | 7.2:-31162208 | MS.gene27498:CDS |
| TCTTAAGAGATGTAATGATT+TGG | 0.373158 | 7.2:+31162355 | None:intergenic |
| TTCTTGATTGGTGGTAAGAT+AGG | 0.387351 | 7.2:-31163694 | MS.gene27498:CDS |
| AAGAGGAGTGATTTCTTGAT+TGG | 0.402107 | 7.2:-31163706 | MS.gene27498:CDS |
| TAAGTTGGATGCTAAATCTA+AGG | 0.404865 | 7.2:-31163590 | MS.gene27498:CDS |
| CTTAAGAAAATTCACGATAC+TGG | 0.413330 | 7.2:-31162339 | MS.gene27498:CDS |
| GCTCTCACCAATCTTGTGGC+AGG | 0.413652 | 7.2:-31162106 | MS.gene27498:intron |
| TATCTGCTGCTTCTGCTTTG+AGG | 0.415054 | 7.2:-31161062 | MS.gene27498:CDS |
| AGAATTTCAATTTGGAAATG+AGG | 0.423421 | 7.2:-31161227 | MS.gene27498:CDS |
| TGTGGTAGAACATATAGTTC+AGG | 0.425025 | 7.2:+31162168 | None:intergenic |
| CAGGTGAAGGTTGGAATTGA+AGG | 0.425995 | 7.2:-31163152 | MS.gene27498:CDS |
| ATGATGCTTAAGAGTGGAAA+AGG | 0.429785 | 7.2:-31163613 | MS.gene27498:CDS |
| AATAAAACCTGCCACAAGAT+TGG | 0.430494 | 7.2:+31162099 | None:intergenic |
| GCAGCAACAGACCTTAGAAT+TGG | 0.434978 | 7.2:-31162240 | MS.gene27498:CDS |
| GGTGAGAGCAAAGCTGCAAT+TGG | 0.448894 | 7.2:+31162120 | None:intergenic |
| GAAACATGTGCCAAGTTCCT+TGG | 0.452194 | 7.2:-31163068 | MS.gene27498:CDS |
| ACGATACTGGCATTGTTCAC+AGG | 0.453178 | 7.2:-31162326 | MS.gene27498:CDS |
| AGTTCAGGAGGACAGTAATC+AGG | 0.454008 | 7.2:+31162183 | None:intergenic |
| ATGGATATGATTTGAACAAA+TGG | 0.455978 | 7.2:-31161200 | MS.gene27498:CDS |
| AAGATAGGAGAAGGGTCATT+TGG | 0.457236 | 7.2:-31163679 | MS.gene27498:CDS |
| CTTGATAGTGATTCTGGTAG+AGG | 0.461595 | 7.2:-31161141 | MS.gene27498:CDS |
| TAGTGATTCTGGTAGAGGTT+GGG | 0.467038 | 7.2:-31161136 | MS.gene27498:CDS |
| AAATGGCAATACCAACCTTA+AGG | 0.473712 | 7.2:-31161266 | MS.gene27498:CDS |
| TACAAAACTTCCAAGGAACT+TGG | 0.480257 | 7.2:+31163058 | None:intergenic |
| TAAGAGTGGAAAAGGTAAGT+TGG | 0.483976 | 7.2:-31163605 | MS.gene27498:CDS |
| AGGAGTGATTTCTTGATTGG+TGG | 0.486103 | 7.2:-31163703 | MS.gene27498:CDS |
| ACCAATTCACAATTCACAAA+AGG | 0.486126 | 7.2:-31163026 | MS.gene27498:CDS |
| CTTTGCTCTCACCAATCTTG+TGG | 0.487689 | 7.2:-31162110 | MS.gene27498:CDS |
| TTTATCAGACATGCAGAGGT+TGG | 0.500221 | 7.2:-31163863 | None:intergenic |
| TGGAAAATGCAGGTGAAGGT+TGG | 0.503897 | 7.2:-31163161 | MS.gene27498:intron |
| ATGACAGATTCTAAGTTTGA+AGG | 0.504582 | 7.2:+31162447 | None:intergenic |
| ATTGGTGGTAAGATAGGAGA+AGG | 0.514578 | 7.2:-31163688 | MS.gene27498:CDS |
| CTGGAAGGAGAGATTTGAAG+AGG | 0.517706 | 7.2:-31163723 | MS.gene27498:CDS |
| TATCAGCTACAAAACTTCCA+AGG | 0.517815 | 7.2:+31163051 | None:intergenic |
| TGACAGATTCTAAGTTTGAA+GGG | 0.525444 | 7.2:+31162448 | None:intergenic |
| ATAGTGATTCTGGTAGAGGT+TGG | 0.526824 | 7.2:-31161137 | MS.gene27498:CDS |
| ATGGCTTGTTTGGAAATTTG+AGG | 0.527072 | 7.2:-31162997 | MS.gene27498:intron |
| GGATGTAAAGCCTTCCAACT+TGG | 0.528793 | 7.2:-31162304 | MS.gene27498:CDS |
| CGATACTGGCATTGTTCACA+GGG | 0.533903 | 7.2:-31162325 | MS.gene27498:CDS |
| CTATCCACAACAAATTGCAT+TGG | 0.535736 | 7.2:+31163751 | None:intergenic |
| GGCTCCAATGCAATTTGTTG+TGG | 0.536387 | 7.2:-31163755 | MS.gene27498:CDS |
| TTGTGGATAGTTTATCTGGA+AGG | 0.538024 | 7.2:-31163738 | MS.gene27498:CDS |
| AATTCACAATTCACAAAAGG+TGG | 0.543613 | 7.2:-31163023 | MS.gene27498:CDS |
| TTTGTAACAACCAAGTTGGA+AGG | 0.544208 | 7.2:+31162294 | None:intergenic |
| CTCTACCAGAATCACTATCA+AGG | 0.552037 | 7.2:+31161142 | None:intergenic |
| TGGAATTGTACTCTTGCAAA+TGG | 0.555729 | 7.2:-31161283 | MS.gene27498:CDS |
| GCAGCTTGAGACCTTAAGGT+TGG | 0.570427 | 7.2:+31161255 | None:intergenic |
| GATATGATTTGAACAAATGG+AGG | 0.576550 | 7.2:-31161197 | MS.gene27498:CDS |
| AGGTGAAGGTTGGAATTGAA+GGG | 0.576855 | 7.2:-31163151 | MS.gene27498:CDS |
| GGAAGACTTTGTGTTTCTTG+TGG | 0.591105 | 7.2:+31162150 | None:intergenic |
| AGGATTTATCAGACATGCAG+AGG | 0.603674 | 7.2:-31163867 | None:intergenic |
| AATTTGGTGATTGTGAAGAG+TGG | 0.607180 | 7.2:-31163121 | MS.gene27498:CDS |
| ATGTTTCGAAATGCGTTGCA+AGG | 0.615252 | 7.2:-31162426 | MS.gene27498:CDS |
| AAAGCTGCAATTGGTTCTGG+AGG | 0.616137 | 7.2:+31162129 | None:intergenic |
| GGACAGTAATCAGGATCCAA+AGG | 0.623204 | 7.2:+31162192 | None:intergenic |
| AAAGAGATGATGCTTAAGAG+TGG | 0.625247 | 7.2:-31163619 | MS.gene27498:CDS |
| ATAGCACCAATAAGAACACC+TGG | 0.641228 | 7.2:+31163793 | None:intergenic |
| TTGGTGGTAAGATAGGAGAA+GGG | 0.647730 | 7.2:-31163687 | MS.gene27498:CDS |
| ATATGATTTGAACAAATGGA+GGG | 0.648335 | 7.2:-31161196 | MS.gene27498:CDS |
| GGTGAAGGTTGGAATTGAAG+GGG | 0.652761 | 7.2:-31163150 | MS.gene27498:CDS |
| GGTAGAACATATAGTTCAGG+AGG | 0.667620 | 7.2:+31162171 | None:intergenic |
| TCATGTAATCAGCAAGAGTG+CGG | 0.675765 | 7.2:+31162484 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATTATGTAATAAAG+TGG | - | chr7.2:31163480-31163499 | MS.gene27498:intron | 10.0% |
| !! | ATCATAATCATTTAATAATT+AGG | - | chr7.2:31163118-31163137 | MS.gene27498:CDS | 10.0% |
| !!! | TAATTTAATGGTTTTATTGT+TGG | - | chr7.2:31161333-31161352 | MS.gene27498:intron | 15.0% |
| !!! | TTCATTGTTTCTTAATTTAA+TGG | - | chr7.2:31161321-31161340 | MS.gene27498:CDS | 15.0% |
| !!! | TTTAACTTTTGTTATGAAAA+TGG | + | chr7.2:31162864-31162883 | None:intergenic | 15.0% |
| !! | ATGACTTAAATTAGATACAT+AGG | - | chr7.2:31161598-31161617 | MS.gene27498:intron | 20.0% |
| !! | ATTTATATTTCAAACAGACA+AGG | + | chr7.2:31163468-31163487 | None:intergenic | 20.0% |
| !!! | ACTAAATAATTTGTATCCAT+AGG | - | chr7.2:31161890-31161909 | MS.gene27498:intron | 20.0% |
| !!! | TTCTACTTAAGATATTTCTA+AGG | + | chr7.2:31163044-31163063 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTGGAATAGTTA+TGG | - | chr7.2:31161344-31161363 | MS.gene27498:intron | 20.0% |
| ! | AACTTGGTTGTTACAAAAAA+AGG | - | chr7.2:31162555-31162574 | MS.gene27498:intron | 25.0% |
| ! | ACTTGGTTGTTACAAAAAAA+GGG | - | chr7.2:31162556-31162575 | MS.gene27498:intron | 25.0% |
| ! | AGAATTTCAATTTGGAAATG+AGG | - | chr7.2:31163616-31163635 | MS.gene27498:CDS | 25.0% |
| ! | ATATGATTTGAACAAATGGA+GGG | - | chr7.2:31163647-31163666 | MS.gene27498:CDS | 25.0% |
| ! | ATGGATATGATTTGAACAAA+TGG | - | chr7.2:31163643-31163662 | MS.gene27498:CDS | 25.0% |
| ! | ATTATTTAGTAAGACACTAC+TGG | + | chr7.2:31161880-31161899 | None:intergenic | 25.0% |
| ! | CAATTAGTATAAAGAACAGT+TGG | + | chr7.2:31162314-31162333 | None:intergenic | 25.0% |
| ! | CATAATTCTTTCCAATTCTA+AGG | + | chr7.2:31162617-31162636 | None:intergenic | 25.0% |
| ! | GAATACATATCAAAAAGATC+AGG | + | chr7.2:31163537-31163556 | None:intergenic | 25.0% |
| ! | GATGTTATAAAGGCTTAATT+AGG | + | chr7.2:31162810-31162829 | None:intergenic | 25.0% |
| ! | GGATAAAGTCATTCTTAAAA+AGG | - | chr7.2:31161274-31161293 | MS.gene27498:CDS | 25.0% |
| ! | TCTTAAGAGATGTAATGATT+TGG | + | chr7.2:31162491-31162510 | None:intergenic | 25.0% |
| ! | TGTTCTTTATACTAATTGCA+GGG | - | chr7.2:31162316-31162335 | MS.gene27498:CDS | 25.0% |
| ! | TTATTTAGTAAGACACTACT+GGG | + | chr7.2:31161879-31161898 | None:intergenic | 25.0% |
| ! | TTCTGTTATCCTATTTACAT+AGG | - | chr7.2:31162766-31162785 | MS.gene27498:intron | 25.0% |
| !! | AGAATGCATTAGTAGTATTT+TGG | - | chr7.2:31163010-31163029 | MS.gene27498:CDS | 25.0% |
| !! | ATTAGTTCTTGAGTAAATGA+AGG | + | chr7.2:31161998-31162017 | None:intergenic | 25.0% |
| !! | CATTTCAGTAACAAAGTATT+AGG | + | chr7.2:31161563-31161582 | None:intergenic | 25.0% |
| !! | TATCAGCAAAAGAAGTATAT+AGG | - | chr7.2:31162951-31162970 | MS.gene27498:intron | 25.0% |
| !! | TTAGCAGAAAAAAGAGTTTT+AGG | - | chr7.2:31162218-31162237 | MS.gene27498:CDS | 25.0% |
| !!! | CAGATTAAACTCATTGATTT+TGG | - | chr7.2:31162579-31162598 | MS.gene27498:intron | 25.0% |
| !!! | TGCTTTGAAGAATTTCAATT+TGG | - | chr7.2:31163608-31163627 | MS.gene27498:CDS | 25.0% |
| !!! | TTGGAGATTTTACTTTTTGT+TGG | - | chr7.2:31160999-31161018 | MS.gene27498:CDS | 25.0% |
| !!! | TTTTTTTGTAACAACCAAGT+TGG | + | chr7.2:31162556-31162575 | None:intergenic | 25.0% |
| AATTCACAAAAGGTGGAAAA+TGG | - | chr7.2:31161827-31161846 | MS.gene27498:intron | 30.0% | |
| AATTCACAATTCACAAAAGG+TGG | - | chr7.2:31161820-31161839 | MS.gene27498:intron | 30.0% | |
| AATTTGGAAATGAGGACATA+TGG | - | chr7.2:31163624-31163643 | MS.gene27498:CDS | 30.0% | |
| ACCAATTCACAATTCACAAA+AGG | - | chr7.2:31161817-31161836 | MS.gene27498:intron | 30.0% | |
| AGATAAACGCTTTCTTCTTT+CGG | + | chr7.2:31163766-31163785 | None:intergenic | 30.0% | |
| ATGACAGATTCTAAGTTTGA+AGG | + | chr7.2:31162399-31162418 | None:intergenic | 30.0% | |
| ATGTAAGATATACGCATCTT+AGG | - | chr7.2:31162278-31162297 | MS.gene27498:CDS | 30.0% | |
| CTGTTCTTTATACTAATTGC+AGG | - | chr7.2:31162315-31162334 | MS.gene27498:CDS | 30.0% | |
| CTTAAGAAAATTCACGATAC+TGG | - | chr7.2:31162504-31162523 | MS.gene27498:intron | 30.0% | |
| GATATGATTTGAACAAATGG+AGG | - | chr7.2:31163646-31163665 | MS.gene27498:CDS | 30.0% | |
| GTCAAATCCAGTGAAAAAAT+CGG | + | chr7.2:31161467-31161486 | None:intergenic | 30.0% | |
| TGACAGATTCTAAGTTTGAA+GGG | + | chr7.2:31162398-31162417 | None:intergenic | 30.0% | |
| TGATGCTTCTATCAATATCT+TGG | + | chr7.2:31162977-31162996 | None:intergenic | 30.0% | |
| TGTTCCTAATTATACACCTT+TGG | - | chr7.2:31162635-31162654 | MS.gene27498:intron | 30.0% | |
| TTTACTATTGTGTTTGCATC+AGG | - | chr7.2:31163075-31163094 | MS.gene27498:CDS | 30.0% | |
| ! | ACCTTTTGTGAATTGTGAAT+TGG | + | chr7.2:31161821-31161840 | None:intergenic | 30.0% |
| ! | CTTTTTGATATGTATTCTGC+TGG | - | chr7.2:31163540-31163559 | MS.gene27498:intron | 30.0% |
| ! | GTAAATGAAGGAGTATAGTA+TGG | + | chr7.2:31161986-31162005 | None:intergenic | 30.0% |
| ! | TAAGTTGGATGCTAAATCTA+AGG | - | chr7.2:31161253-31161272 | MS.gene27498:CDS | 30.0% |
| ! | TGCTATTGATGCATATCTTT+TGG | - | chr7.2:31161067-31161086 | MS.gene27498:CDS | 30.0% |
| ! | TTTGTTGTGGATAGTTTATC+TGG | - | chr7.2:31161101-31161120 | MS.gene27498:CDS | 30.0% |
| !! | TGTTGTTTATTCTGCTGTTT+TGG | - | chr7.2:31161187-31161206 | MS.gene27498:CDS | 30.0% |
| !!! | GATTTTACTTTTTGTTGGAC+TGG | - | chr7.2:31161004-31161023 | MS.gene27498:CDS | 30.0% |
| !!! | GTTGGTTTTAACTTTATCCT+TGG | - | chr7.2:31161951-31161970 | MS.gene27498:intron | 30.0% |
| AAAGAGATGATGCTTAAGAG+TGG | - | chr7.2:31161224-31161243 | MS.gene27498:CDS | 35.0% | |
| AAATGGCAATACCAACCTTA+AGG | - | chr7.2:31163577-31163596 | MS.gene27498:CDS | 35.0% | |
| AAGAGGAGTGATTTCTTGAT+TGG | - | chr7.2:31161137-31161156 | MS.gene27498:CDS | 35.0% | |
| AATAAAACCTGCCACAAGAT+TGG | + | chr7.2:31162747-31162766 | None:intergenic | 35.0% | |
| ATGATGCTTAAGAGTGGAAA+AGG | - | chr7.2:31161230-31161249 | MS.gene27498:CDS | 35.0% | |
| ATTAGGCTGTTTATCCAAAC+AGG | + | chr7.2:31162793-31162812 | None:intergenic | 35.0% | |
| ATTGAAGGGGCTAAAGAATT+TGG | - | chr7.2:31161706-31161725 | MS.gene27498:intron | 35.0% | |
| CAAAAATAGAAGCTGATCGA+TGG | - | chr7.2:31161662-31161681 | MS.gene27498:intron | 35.0% | |
| CAGAATCACTATCAAGGATT+TGG | + | chr7.2:31163698-31163717 | None:intergenic | 35.0% | |
| CTATCCACAACAAATTGCAT+TGG | + | chr7.2:31161095-31161114 | None:intergenic | 35.0% | |
| GGCACTATAACAATATAGAG+CGG | - | chr7.2:31162092-31162111 | MS.gene27498:intron | 35.0% | |
| TAAGAGTGGAAAAGGTAAGT+TGG | - | chr7.2:31161238-31161257 | MS.gene27498:CDS | 35.0% | |
| TACAAAACTTCCAAGGAACT+TGG | + | chr7.2:31161788-31161807 | None:intergenic | 35.0% | |
| TACGCTAATAGAGTGAAACT+AGG | + | chr7.2:31162155-31162174 | None:intergenic | 35.0% | |
| TATCAGCTACAAAACTTCCA+AGG | + | chr7.2:31161795-31161814 | None:intergenic | 35.0% | |
| TATGAGATTAATCCTCGAGT+TGG | - | chr7.2:31161430-31161449 | MS.gene27498:intron | 35.0% | |
| TCACCACCTAGAAGAAAATA+AGG | + | chr7.2:31163810-31163829 | None:intergenic | 35.0% | |
| TCTAGAAAGTCTGAAGAGAA+AGG | + | chr7.2:31163359-31163378 | None:intergenic | 35.0% | |
| TCTCATAGCAGATTCAAGTA+CGG | + | chr7.2:31161417-31161436 | None:intergenic | 35.0% | |
| TGGAATTGTACTCTTGCAAA+TGG | - | chr7.2:31163560-31163579 | MS.gene27498:intron | 35.0% | |
| TGTGGTAGAACATATAGTTC+AGG | + | chr7.2:31162678-31162697 | None:intergenic | 35.0% | |
| TTAGGCTGTTTATCCAAACA+GGG | + | chr7.2:31162792-31162811 | None:intergenic | 35.0% | |
| TTGTGGATAGTTTATCTGGA+AGG | - | chr7.2:31161105-31161124 | MS.gene27498:CDS | 35.0% | |
| ! | AAGAATACGAGTTTGTTTCC+TGG | + | chr7.2:31161510-31161529 | None:intergenic | 35.0% |
| ! | AATTTGGTGATTGTGAAGAG+TGG | - | chr7.2:31161722-31161741 | MS.gene27498:intron | 35.0% |
| ! | GATATGCGCTGATGTTATAA+AGG | + | chr7.2:31162820-31162839 | None:intergenic | 35.0% |
| ! | GGATCCAAAGGTGTATAATT+AGG | + | chr7.2:31162642-31162661 | None:intergenic | 35.0% |
| ! | TCTTCTTTCGGAACTTCTTT+TGG | + | chr7.2:31163754-31163773 | None:intergenic | 35.0% |
| ! | TTCTTGATTGGTGGTAAGAT+AGG | - | chr7.2:31161149-31161168 | MS.gene27498:CDS | 35.0% |
| ! | TTTGTAACAACCAAGTTGGA+AGG | + | chr7.2:31162552-31162571 | None:intergenic | 35.0% |
| ! | TTTTACTTAACTGCAAGACC+AGG | - | chr7.2:31161032-31161051 | MS.gene27498:CDS | 35.0% |
| !! | ATGGCTTGTTTGGAAATTTG+AGG | - | chr7.2:31161846-31161865 | MS.gene27498:intron | 35.0% |
| !! | CAAATCCTTGATAGTGATTC+TGG | - | chr7.2:31163696-31163715 | MS.gene27498:CDS | 35.0% |
| !! | GTTCTGAACATTTTCAGTGT+TGG | - | chr7.2:31161933-31161952 | MS.gene27498:intron | 35.0% |
| !!! | AGAACATCCGATTTTTTCAC+TGG | - | chr7.2:31161457-31161476 | MS.gene27498:intron | 35.0% |
| !!! | AGGCATCCTTATTTTCTTCT+AGG | - | chr7.2:31163801-31163820 | MS.gene27498:CDS | 35.0% |
| !!! | CATCCTTATTTTCTTCTAGG+TGG | - | chr7.2:31163804-31163823 | MS.gene27498:CDS | 35.0% |
| !!! | TAGCGTCGCATTTTTTCATA+GGG | + | chr7.2:31162131-31162150 | None:intergenic | 35.0% |
| !!! | TTCTGCTGTTTTGGTAACAA+AGG | - | chr7.2:31161196-31161215 | MS.gene27498:CDS | 35.0% |
| AAACTCGTATTCTTTGCCTG+AGG | - | chr7.2:31161516-31161535 | MS.gene27498:intron | 40.0% | |
| AACAGTAGGTGAAATGTGAG+TGG | + | chr7.2:31162062-31162081 | None:intergenic | 40.0% | |
| AACTCGTATTCTTTGCCTGA+GGG | - | chr7.2:31161517-31161536 | MS.gene27498:intron | 40.0% | |
| AAGATAGGAGAAGGGTCATT+TGG | - | chr7.2:31161164-31161183 | MS.gene27498:CDS | 40.0% | |
| AGGAGTGATTTCTTGATTGG+TGG | - | chr7.2:31161140-31161159 | MS.gene27498:CDS | 40.0% | |
| AGGTGAAGGTTGGAATTGAA+GGG | - | chr7.2:31161692-31161711 | MS.gene27498:intron | 40.0% | |
| ATACACAGTCTGTTTGCTTG+AGG | + | chr7.2:31163424-31163443 | None:intergenic | 40.0% | |
| ATAGCACCAATAAGAACACC+TGG | + | chr7.2:31161053-31161072 | None:intergenic | 40.0% | |
| ATAGTGATTCTGGTAGAGGT+TGG | - | chr7.2:31163706-31163725 | MS.gene27498:CDS | 40.0% | |
| ATGTTTCGAAATGCGTTGCA+AGG | - | chr7.2:31162417-31162436 | MS.gene27498:CDS | 40.0% | |
| CAAACAGGGCCTATGTAAAT+AGG | + | chr7.2:31162778-31162797 | None:intergenic | 40.0% | |
| CACCTACTGTTGTCAAATAG+CGG | - | chr7.2:31162071-31162090 | MS.gene27498:intron | 40.0% | |
| CAGGAAGGATATTCAGATTG+TGG | - | chr7.2:31163094-31163113 | MS.gene27498:CDS | 40.0% | |
| CTATTGTGTTTGCATCAGGA+AGG | - | chr7.2:31163079-31163098 | MS.gene27498:CDS | 40.0% | |
| CTATTTACATAGGCCCTGTT+TGG | - | chr7.2:31162776-31162795 | MS.gene27498:intron | 40.0% | |
| CTCTACCAGAATCACTATCA+AGG | + | chr7.2:31163704-31163723 | None:intergenic | 40.0% | |
| GATGATGCATAGGAAACCTA+TGG | + | chr7.2:31161909-31161928 | None:intergenic | 40.0% | |
| GGAAGACTTTGTGTTTCTTG+TGG | + | chr7.2:31162696-31162715 | None:intergenic | 40.0% | |
| GGTAGAACATATAGTTCAGG+AGG | + | chr7.2:31162675-31162694 | None:intergenic | 40.0% | |
| TACACAGTCTGTTTGCTTGA+GGG | + | chr7.2:31163423-31163442 | None:intergenic | 40.0% | |
| TAGTATGGTACTAGACTCCA+AGG | + | chr7.2:31161971-31161990 | None:intergenic | 40.0% | |
| TAGTGATTCTGGTAGAGGTT+GGG | - | chr7.2:31163707-31163726 | MS.gene27498:CDS | 40.0% | |
| TCATGTAATCAGCAAGAGTG+CGG | + | chr7.2:31162362-31162381 | None:intergenic | 40.0% | |
| ! | ATTGGTGGTAAGATAGGAGA+AGG | - | chr7.2:31161155-31161174 | MS.gene27498:CDS | 40.0% |
| ! | CAGAACTCATGATGATGCAT+AGG | + | chr7.2:31161919-31161938 | None:intergenic | 40.0% |
| ! | TTGGTGGTAAGATAGGAGAA+GGG | - | chr7.2:31161156-31161175 | MS.gene27498:CDS | 40.0% |
| ! | TTTTCTTCTAGGTGGTGATC+AGG | - | chr7.2:31163812-31163831 | MS.gene27498:CDS | 40.0% |
| !! | AAGGTGGAAAATGGCTTGTT+TGG | - | chr7.2:31161836-31161855 | MS.gene27498:intron | 40.0% |
| !! | CTTGATAGTGATTCTGGTAG+AGG | - | chr7.2:31163702-31163721 | MS.gene27498:CDS | 40.0% |
| !!! | AGCGTCGCATTTTTTCATAG+GGG | + | chr7.2:31162130-31162149 | None:intergenic | 40.0% |
| !!! | CTAGCGTCGCATTTTTTCAT+AGG | + | chr7.2:31162132-31162151 | None:intergenic | 40.0% |
| !!! | TACTTTTTGTTGGACTGGCA+TGG | - | chr7.2:31161009-31161028 | MS.gene27498:CDS | 40.0% |
| ACGATACTGGCATTGTTCAC+AGG | - | chr7.2:31162517-31162536 | MS.gene27498:intron | 45.0% | |
| AGCTGATCGATGGAAAATGC+AGG | - | chr7.2:31161672-31161691 | MS.gene27498:intron | 45.0% | |
| AGGAACTTGGCACATGTTTC+AGG | + | chr7.2:31161775-31161794 | None:intergenic | 45.0% | |
| AGTTCAGGAGGACAGTAATC+AGG | + | chr7.2:31162663-31162682 | None:intergenic | 45.0% | |
| CAAAGCAGCTTGAGACCTTA+AGG | + | chr7.2:31163595-31163614 | None:intergenic | 45.0% | |
| CAGGTGAAGGTTGGAATTGA+AGG | - | chr7.2:31161691-31161710 | MS.gene27498:intron | 45.0% | |
| CGATACTGGCATTGTTCACA+GGG | - | chr7.2:31162518-31162537 | MS.gene27498:intron | 45.0% | |
| CTGGAAGGAGAGATTTGAAG+AGG | - | chr7.2:31161120-31161139 | MS.gene27498:CDS | 45.0% | |
| CTTTGCTCTCACCAATCTTG+TGG | - | chr7.2:31162733-31162752 | MS.gene27498:intron | 45.0% | |
| GAAACATGTGCCAAGTTCCT+TGG | - | chr7.2:31161775-31161794 | MS.gene27498:intron | 45.0% | |
| GCAAGACCAGGTGTTCTTAT+TGG | - | chr7.2:31161044-31161063 | MS.gene27498:CDS | 45.0% | |
| GCAGCAACAGACCTTAGAAT+TGG | - | chr7.2:31162603-31162622 | MS.gene27498:intron | 45.0% | |
| GGACAGTAATCAGGATCCAA+AGG | + | chr7.2:31162654-31162673 | None:intergenic | 45.0% | |
| GGATGTAAAGCCTTCCAACT+TGG | - | chr7.2:31162539-31162558 | MS.gene27498:intron | 45.0% | |
| GGTGAAGGTTGGAATTGAAG+GGG | - | chr7.2:31161693-31161712 | MS.gene27498:intron | 45.0% | |
| GTTTCCTGGAGTCACTCATT+TGG | + | chr7.2:31161496-31161515 | None:intergenic | 45.0% | |
| TCGATGGAAAATGCAGGTGA+AGG | - | chr7.2:31161678-31161697 | MS.gene27498:intron | 45.0% | |
| TGCCGCTATTTGACAACAGT+AGG | + | chr7.2:31162076-31162095 | None:intergenic | 45.0% | |
| TGGAAAATGCAGGTGAAGGT+TGG | - | chr7.2:31161682-31161701 | MS.gene27498:intron | 45.0% | |
| ! | AGCAAAGCTGCAATTGGTTC+TGG | + | chr7.2:31162720-31162739 | None:intergenic | 45.0% |
| ! | TATCTGCTGCTTCTGCTTTG+AGG | - | chr7.2:31163781-31163800 | MS.gene27498:CDS | 45.0% |
| !! | AAAGCTGCAATTGGTTCTGG+AGG | + | chr7.2:31162717-31162736 | None:intergenic | 45.0% |
| !! | GGCTCCAATGCAATTTGTTG+TGG | - | chr7.2:31161088-31161107 | MS.gene27498:CDS | 45.0% |
| CCTGGAGTCACTCATTTGGA+AGG | + | chr7.2:31161492-31161511 | None:intergenic | 50.0% | |
| CCTTCCAAATGAGTGACTCC+AGG | - | chr7.2:31161489-31161508 | MS.gene27498:intron | 50.0% | |
| GCAGCTTGAGACCTTAAGGT+TGG | + | chr7.2:31163591-31163610 | None:intergenic | 50.0% | |
| GCAGGGTTGTCCATATCACA+GGG | - | chr7.2:31162333-31162352 | MS.gene27498:CDS | 50.0% | |
| GGTGAGAGCAAAGCTGCAAT+TGG | + | chr7.2:31162726-31162745 | None:intergenic | 50.0% | |
| TGCAGGGTTGTCCATATCAC+AGG | - | chr7.2:31162332-31162351 | MS.gene27498:CDS | 50.0% | |
| TTCTGCTAATGCCGCCACAT+CGG | + | chr7.2:31162207-31162226 | None:intergenic | 50.0% | |
| ! | CCACATCGGCTAGCAAAATC+TGG | + | chr7.2:31162193-31162212 | None:intergenic | 50.0% |
| ! | CCAGATTTTGCTAGCCGATG+TGG | - | chr7.2:31162190-31162209 | MS.gene27498:CDS | 50.0% |
| ! | GATTTTGCTAGCCGATGTGG+CGG | - | chr7.2:31162193-31162212 | MS.gene27498:CDS | 50.0% |
| ! | TGATAACGTGACTCTCCCTC+AGG | + | chr7.2:31161535-31161554 | None:intergenic | 50.0% |
| AGTGCGGTCTCCCTGTGATA+TGG | + | chr7.2:31162346-31162365 | None:intergenic | 55.0% | |
| GATGTTCTGCTGCCAACTCG+AGG | + | chr7.2:31161445-31161464 | None:intergenic | 55.0% | |
| GCTCTCACCAATCTTGTGGC+AGG | - | chr7.2:31162737-31162756 | MS.gene27498:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 31160990 | 31163875 | 31160990 | ID=MS.gene27498 |
| chr7.2 | mRNA | 31160990 | 31163875 | 31160990 | ID=MS.gene27498.t1;Parent=MS.gene27498 |
| chr7.2 | exon | 31163570 | 31163875 | 31163570 | ID=MS.gene27498.t1.exon1;Parent=MS.gene27498.t1 |
| chr7.2 | CDS | 31163570 | 31163875 | 31163570 | ID=cds.MS.gene27498.t1;Parent=MS.gene27498.t1 |
| chr7.2 | exon | 31162998 | 31163171 | 31162998 | ID=MS.gene27498.t1.exon2;Parent=MS.gene27498.t1 |
| chr7.2 | CDS | 31162998 | 31163171 | 31162998 | ID=cds.MS.gene27498.t1;Parent=MS.gene27498.t1 |
| chr7.2 | exon | 31162107 | 31162511 | 31162107 | ID=MS.gene27498.t1.exon3;Parent=MS.gene27498.t1 |
| chr7.2 | CDS | 31162107 | 31162511 | 31162107 | ID=cds.MS.gene27498.t1;Parent=MS.gene27498.t1 |
| chr7.2 | exon | 31160990 | 31161340 | 31160990 | ID=MS.gene27498.t1.exon4;Parent=MS.gene27498.t1 |
| chr7.2 | CDS | 31160990 | 31161340 | 31160990 | ID=cds.MS.gene27498.t1;Parent=MS.gene27498.t1 |
| Gene Sequence |
| Protein sequence |
