Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53510.t1 | XP_003630031.1 | 93.5 | 276 | 14 | 1 | 1 | 276 | 1 | 272 | 1.40E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53510.t1 | G7L9N3 | 93.5 | 276 | 14 | 1 | 1 | 276 | 1 | 272 | 9.8e-137 | 495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene53510 | 0.827402 | 1.60E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene53510 | 0.852785 | 3.68E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene53510 | 0.809082 | 2.26E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene53510 | 0.882465 | 1.02E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene53510 | 0.818783 | 1.64E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene53510 | 0.847299 | 1.26E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene53510 | 0.829879 | 4.02E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene53510 | 0.855619 | 5.59E-62 | -1.69E-46 |
| MS.gene049627 | MS.gene53510 | 0.828814 | 7.29E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene53510 | 0.834067 | 3.71E-56 | -1.69E-46 |
| MS.gene049794 | MS.gene53510 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene53510 | 0.823476 | 1.36E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene53510 | 0.828699 | 7.77E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene53510 | 0.81237 | 4.39E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene53510 | 0.851527 | 8.38E-61 | -1.69E-46 |
| MS.gene050315 | MS.gene53510 | 0.810261 | 1.26E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene53510 | 0.840965 | 6.33E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene53510 | 0.807226 | 5.60E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene53510 | 0.863707 | 2.05E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene53510 | 0.816801 | 4.59E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene53510 | 0.874416 | 6.87E-68 | -1.69E-46 |
| MS.gene050547 | MS.gene53510 | -0.807628 | 4.61E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene53510 | 0.853092 | 3.00E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene53510 | 0.819165 | 1.34E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene53510 | 0.814373 | 1.59E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene53510 | 0.817929 | 2.56E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene53510 | 0.907868 | 3.18E-81 | -1.69E-46 |
| MS.gene050772 | MS.gene53510 | 0.85232 | 4.99E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene53510 | 0.87021 | 1.73E-66 | -1.69E-46 |
| MS.gene05081 | MS.gene53510 | 0.853103 | 2.98E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene53510 | 0.879702 | 1.00E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene53510 | 0.879326 | 1.37E-69 | -1.69E-46 |
| MS.gene050904 | MS.gene53510 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene53510 | 0.900613 | 6.15E-78 | -1.69E-46 |
| MS.gene050986 | MS.gene53510 | 0.815376 | 9.54E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene53510 | 0.80215 | 6.43E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene53510 | 0.81193 | 5.47E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene53510 | 0.833348 | 5.61E-56 | -1.69E-46 |
| MS.gene051551 | MS.gene53510 | 0.812361 | 4.41E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene53510 | 0.842321 | 2.78E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene53510 | 0.859175 | 4.96E-63 | -1.69E-46 |
| MS.gene051734 | MS.gene53510 | 0.82336 | 1.44E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene53510 | 0.873608 | 1.29E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene53510 | 0.825287 | 5.09E-54 | -1.69E-46 |
| MS.gene052015 | MS.gene53510 | -0.801845 | 7.43E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene53510 | 0.869667 | 2.61E-66 | -1.69E-46 |
| MS.gene05234 | MS.gene53510 | -0.800864 | 1.18E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene53510 | 0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene53510 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene53510 | 0.853274 | 2.66E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene53510 | 0.858022 | 1.10E-62 | -1.69E-46 |
| MS.gene052501 | MS.gene53510 | 0.830689 | 2.55E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene53510 | 0.846874 | 1.65E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene53510 | 0.82868 | 7.86E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene53510 | 0.846707 | 1.83E-59 | -1.69E-46 |
| MS.gene052670 | MS.gene53510 | 0.803902 | 2.79E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene53510 | 0.850557 | 1.57E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene53510 | 0.852589 | 4.18E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene53510 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene53510 | 0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene53510 | 0.848457 | 6.05E-60 | -1.69E-46 |
| MS.gene052982 | MS.gene53510 | 0.843517 | 1.34E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene53510 | 0.801793 | 7.61E-49 | -1.69E-46 |
| MS.gene053117 | MS.gene53510 | 0.810161 | 1.32E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene53510 | 0.875202 | 3.71E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene53510 | 0.845882 | 3.08E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene53510 | 0.850842 | 1.31E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene53510 | 0.851886 | 6.63E-61 | -1.69E-46 |
| MS.gene053318 | MS.gene53510 | 0.827301 | 1.69E-54 | -1.69E-46 |
| MS.gene053421 | MS.gene53510 | -0.823164 | 1.60E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene53510 | 0.856289 | 3.56E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene53510 | 0.836824 | 7.46E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene53510 | 0.835578 | 1.55E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene53510 | 0.875632 | 2.64E-68 | -1.69E-46 |
| MS.gene053579 | MS.gene53510 | 0.84354 | 1.32E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene53510 | 0.871828 | 5.07E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene53510 | 0.825062 | 5.75E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene53510 | 0.884481 | 1.85E-71 | -1.69E-46 |
| MS.gene053916 | MS.gene53510 | 0.801815 | 7.53E-49 | -1.69E-46 |
| MS.gene054003 | MS.gene53510 | 0.839307 | 1.71E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene53510 | 0.891759 | 2.96E-74 | -1.69E-46 |
| MS.gene054595 | MS.gene53510 | 0.860569 | 1.89E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene53510 | 0.848873 | 4.64E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene53510 | 0.826626 | 2.45E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene53510 | -0.823461 | 1.37E-53 | -1.69E-46 |
| MS.gene054707 | MS.gene53510 | -0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene53510 | 0.857848 | 1.23E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene53510 | 0.868465 | 6.40E-66 | -1.69E-46 |
| MS.gene05494 | MS.gene53510 | 0.836784 | 7.64E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene53510 | 0.824987 | 5.99E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene53510 | 0.820093 | 8.23E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene53510 | 0.825322 | 4.99E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene53510 | 0.843674 | 1.21E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene53510 | 0.839992 | 1.14E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene53510 | 0.838195 | 3.32E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene53510 | 0.857981 | 1.13E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene53510 | 0.88862 | 5.02E-73 | -1.69E-46 |
| MS.gene055722 | MS.gene53510 | 0.82237 | 2.46E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene53510 | 0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene53510 | 0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene53510 | 0.853112 | 2.96E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene53510 | 0.837009 | 6.69E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene53510 | 0.854448 | 1.22E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene53510 | 0.848016 | 8.02E-60 | -1.69E-46 |
| MS.gene056040 | MS.gene53510 | 0.866354 | 3.03E-65 | -1.69E-46 |
| MS.gene056166 | MS.gene53510 | 0.859193 | 4.90E-63 | -1.69E-46 |
| MS.gene056409 | MS.gene53510 | 0.831246 | 1.86E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene53510 | 0.842604 | 2.34E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene53510 | 0.807377 | 5.21E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene53510 | 0.853056 | 3.08E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene53510 | 0.84725 | 1.30E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene53510 | 0.849578 | 2.95E-60 | -1.69E-46 |
| MS.gene056647 | MS.gene53510 | -0.818062 | 2.39E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene53510 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene53510 | 0.838713 | 2.44E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene53510 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene53510 | 0.84731 | 1.25E-59 | -1.69E-46 |
| MS.gene057289 | MS.gene53510 | 0.804865 | 1.76E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene53510 | 0.824052 | 9.95E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene53510 | 0.864535 | 1.13E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene53510 | 0.84344 | 1.40E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene53510 | 0.874548 | 6.20E-68 | -1.69E-46 |
| MS.gene058120 | MS.gene53510 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene53510 | 0.872664 | 2.67E-67 | -1.69E-46 |
| MS.gene058157 | MS.gene53510 | 0.874453 | 6.68E-68 | -1.69E-46 |
| MS.gene058323 | MS.gene53510 | 0.835404 | 1.71E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene53510 | 0.841243 | 5.35E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene53510 | 0.815544 | 8.76E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene53510 | 0.915632 | 4.67E-85 | -1.69E-46 |
| MS.gene058419 | MS.gene53510 | 0.836518 | 8.93E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene53510 | 0.856873 | 2.40E-62 | -1.69E-46 |
| MS.gene058700 | MS.gene53510 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene53510 | 0.849886 | 2.43E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene53510 | 0.858611 | 7.31E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene53510 | 0.8096 | 1.75E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene53510 | 0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene53510 | 0.837197 | 5.99E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene53510 | 0.888553 | 5.33E-73 | -1.69E-46 |
| MS.gene059103 | MS.gene53510 | -0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene53510 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene53510 | 0.82886 | 7.11E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene53510 | 0.836438 | 9.36E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene53510 | 0.827571 | 1.45E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene53510 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene53510 | 0.875426 | 3.11E-68 | -1.69E-46 |
| MS.gene059677 | MS.gene53510 | 0.828345 | 9.47E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene53510 | 0.865699 | 4.88E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene53510 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene53510 | 0.832767 | 7.83E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene53510 | 0.83203 | 1.19E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene53510 | 0.823045 | 1.71E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene53510 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene53510 | 0.821519 | 3.87E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene53510 | -0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene53510 | 0.843645 | 1.23E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene53510 | 0.833008 | 6.83E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene53510 | 0.889343 | 2.64E-73 | -1.69E-46 |
| MS.gene060835 | MS.gene53510 | 0.818721 | 1.69E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene53510 | 0.818733 | 1.68E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene53510 | 0.895446 | 9.51E-76 | -1.69E-46 |
| MS.gene060982 | MS.gene53510 | 0.836292 | 1.02E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene53510 | 0.856754 | 2.60E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53510.t1 | MTR_8g089550 | 92.806 | 278 | 16 | 1 | 1 | 278 | 1 | 274 | 0.0 | 523 |
| MS.gene53510.t1 | MTR_8g089550 | 91.099 | 191 | 13 | 1 | 1 | 191 | 1 | 187 | 8.25e-123 | 350 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53510.t1 | AT3G26085 | 61.826 | 241 | 85 | 2 | 45 | 278 | 29 | 269 | 1.29e-101 | 298 |
| MS.gene53510.t1 | AT3G26085 | 61.826 | 241 | 85 | 2 | 45 | 278 | 50 | 290 | 4.50e-101 | 297 |
| MS.gene53510.t1 | AT3G26085 | 61.826 | 241 | 85 | 2 | 45 | 278 | 70 | 310 | 7.98e-101 | 297 |
| MS.gene53510.t1 | AT3G26085 | 61.826 | 241 | 85 | 2 | 45 | 278 | 79 | 319 | 9.19e-101 | 297 |
Find 54 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCCCTCTTGGATTTCT+TGG | 0.137206 | 4.2:+12110546 | None:intergenic |
| CGGCGCAGTTCTGCCACTTT+TGG | 0.146735 | 4.2:-12107281 | MS.gene53510:CDS |
| CTGGTCTCATTGCTGCTTTC+GGG | 0.149947 | 4.2:-12110384 | MS.gene53510:CDS |
| TGTTCAAAATGACAACTTAT+TGG | 0.182949 | 4.2:-12110488 | MS.gene53510:CDS |
| TCTGGTCTCATTGCTGCTTT+CGG | 0.246146 | 4.2:-12110385 | MS.gene53510:CDS |
| ACCTTTGTTGGTCTTGTATA+CGG | 0.257492 | 4.2:-12107029 | MS.gene53510:CDS |
| GCGGTAGCTGCTTTAATCTT+TGG | 0.265287 | 4.2:-12107238 | MS.gene53510:CDS |
| CATCTAAGTTACCTGTCTAT+TGG | 0.300999 | 4.2:+12109122 | None:intergenic |
| CCTTAGCTCTCTCCAACCTT+TGG | 0.311835 | 4.2:-12107448 | MS.gene53510:CDS |
| CAAGCTTGCATACTGACTTC+TGG | 0.334409 | 4.2:-12110403 | MS.gene53510:CDS |
| GCCATAAAAGCCCTCCTATC+AGG | 0.343970 | 4.2:+12106946 | None:intergenic |
| AGCTTGAAGCACAGCACTCC+TGG | 0.355918 | 4.2:+12110420 | None:intergenic |
| TGTTTCAGGGCAACCTTTGT+TGG | 0.366022 | 4.2:-12107041 | MS.gene53510:intron |
| ATGCTAACCCTATTCCTTCC+AGG | 0.372799 | 4.2:-12110438 | MS.gene53510:CDS |
| ACAGCACTCCTGGAAGGAAT+AGG | 0.375154 | 4.2:+12110430 | None:intergenic |
| TCTCGCACACTCTCAATTCC+TGG | 0.384312 | 4.2:-12110987 | MS.gene53510:CDS |
| GAAACTATTCCTTTGCCATC+TGG | 0.393537 | 4.2:-12107192 | MS.gene53510:intron |
| TGGCATCTTGAGATGATTAC+AGG | 0.394200 | 4.2:-12109222 | MS.gene53510:CDS |
| TGTATCAGGTCCTTCCCTCT+TGG | 0.395014 | 4.2:+12110537 | None:intergenic |
| AATAGAAGGATTGCCGGTCT+TGG | 0.411237 | 4.2:-12110041 | MS.gene53510:CDS |
| TCTCATGTTGCGTCAATAGA+AGG | 0.415124 | 4.2:-12110055 | MS.gene53510:CDS |
| TGCGTCAATAGAAGGATTGC+CGG | 0.432824 | 4.2:-12110047 | MS.gene53510:CDS |
| CAGCACTCCTGGAAGGAATA+GGG | 0.442213 | 4.2:+12110431 | None:intergenic |
| CATGCAGTGAACAACCTGAT+AGG | 0.453687 | 4.2:-12106960 | MS.gene53510:CDS |
| CTCTAGCCTTGCAGTTCCCA+TGG | 0.454900 | 4.2:-12106988 | MS.gene53510:CDS |
| TCACTAGACTCAGCAAAATC+CGG | 0.479458 | 4.2:+12109150 | None:intergenic |
| GCTCTTTGCTATTGAAGACT+TGG | 0.480110 | 4.2:-12109173 | MS.gene53510:CDS |
| GAGAGATCTACAGATGTATC+AGG | 0.496866 | 4.2:+12110523 | None:intergenic |
| GTCCAGTTCATTCCCAAAAG+TGG | 0.502847 | 4.2:+12107268 | None:intergenic |
| CGGCAATATAATCCAAAGGT+TGG | 0.521359 | 4.2:+12107436 | None:intergenic |
| TAGTGAAGCAGCCAATAGAC+AGG | 0.526883 | 4.2:-12109133 | MS.gene53510:intron |
| GTTCACTGCATGAGAAGCCA+TGG | 0.542051 | 4.2:+12106971 | None:intergenic |
| GGGTTAGCATTCTCAACAAG+TGG | 0.542305 | 4.2:+12110451 | None:intergenic |
| TTTCGGGACAGTGATTCGCC+AGG | 0.545417 | 4.2:-12110368 | MS.gene53510:intron |
| TTTGCTATTGAAGACTTGGC+CGG | 0.546719 | 4.2:-12109169 | MS.gene53510:CDS |
| TCTGTAGAGCAGTCCAAGAC+CGG | 0.556859 | 4.2:+12110028 | None:intergenic |
| GCAGTGAACAACCTGATAGG+AGG | 0.562292 | 4.2:-12106957 | MS.gene53510:CDS |
| ACTGTGAGGGAGAGTGATGA+AGG | 0.564456 | 4.2:+12110921 | None:intergenic |
| GCCAAGAAATCCAAGAGGGA+AGG | 0.567102 | 4.2:-12110547 | MS.gene53510:CDS |
| GATAGTACTACAGCAACTCC+AGG | 0.598640 | 4.2:+12110969 | None:intergenic |
| CCAAAGGTTGGAGAGAGCTA+AGG | 0.600412 | 4.2:+12107448 | None:intergenic |
| TGAAGCACAGCACTCCTGGA+AGG | 0.602584 | 4.2:+12110424 | None:intergenic |
| CAGTGAACAACCTGATAGGA+GGG | 0.604035 | 4.2:-12106956 | MS.gene53510:CDS |
| TCCGTATACAAGACCAACAA+AGG | 0.604699 | 4.2:+12107028 | None:intergenic |
| GTGTGATTAACTAACTGTGA+GGG | 0.617765 | 4.2:+12110908 | None:intergenic |
| CATGGGAACTGCAAGGCTAG+AGG | 0.618400 | 4.2:+12106989 | None:intergenic |
| TTCACTGCATGAGAAGCCAT+GGG | 0.629050 | 4.2:+12106972 | None:intergenic |
| GGACATGCACCAGATGGCAA+AGG | 0.641457 | 4.2:+12107183 | None:intergenic |
| AATTCCAGGCAAAACTGCAA+CGG | 0.649711 | 4.2:+12107416 | None:intergenic |
| GAGAAGCCATGGGAACTGCA+AGG | 0.658768 | 4.2:+12106982 | None:intergenic |
| AATGAACTGGACGAGTATTG+CGG | 0.660794 | 4.2:-12107257 | MS.gene53510:CDS |
| GCAACGGCAATATAATCCAA+AGG | 0.664800 | 4.2:+12107432 | None:intergenic |
| AGTGTGCGAGAGATAAAGCA+TGG | 0.665545 | 4.2:+12110999 | None:intergenic |
| AAAGTGGCAGAACTGCGCCG+CGG | 0.783792 | 4.2:+12107284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTATA+GGG | - | chr4.2:12107332-12107351 | MS.gene53510:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTAT+AGG | - | chr4.2:12107331-12107350 | MS.gene53510:intron | 0.0% |
| !! | ATAAAAATAGAAATTAAAGA+AGG | + | chr4.2:12107050-12107069 | None:intergenic | 10.0% |
| !! | AAAAAAAAATCAATTTCACT+AGG | + | chr4.2:12107315-12107334 | None:intergenic | 15.0% |
| !! | AAGTTATTATCAAAAGTTTA+TGG | - | chr4.2:12107195-12107214 | MS.gene53510:CDS | 15.0% |
| !! | AGTTATTATCAAAAGTTTAT+GGG | - | chr4.2:12107196-12107215 | MS.gene53510:CDS | 15.0% |
| !! | ATATTATTGTTTATGTTTCA+GGG | - | chr4.2:12110872-12110891 | MS.gene53510:intron | 15.0% |
| !! | TGATGAAAAATAAATAAGAA+CGG | + | chr4.2:12110576-12110595 | None:intergenic | 15.0% |
| !! | TTTGAATATTATATAGTAGA+TGG | - | chr4.2:12110317-12110336 | MS.gene53510:intron | 15.0% |
| !!! | AATTATTATTAGAGTTTGTT+AGG | + | chr4.2:12108984-12109003 | None:intergenic | 15.0% |
| !!! | TAGAATATTTCATGATTTTA+GGG | + | chr4.2:12109056-12109075 | None:intergenic | 15.0% |
| !!! | TTAGAATATTTCATGATTTT+AGG | + | chr4.2:12109057-12109076 | None:intergenic | 15.0% |
| !! | AATATGATTCTAATTAGATC+AGG | + | chr4.2:12110857-12110876 | None:intergenic | 20.0% |
| !! | AATTATTAAGAACATTTCAG+AGG | + | chr4.2:12108208-12108227 | None:intergenic | 20.0% |
| !! | ACCAATGAATAAGAAATAAA+AGG | + | chr4.2:12109436-12109455 | None:intergenic | 20.0% |
| !! | ATGCTATGATATATTTATTG+TGG | - | chr4.2:12108243-12108262 | MS.gene53510:intron | 20.0% |
| !! | CAATAAACATACATTTCATT+TGG | - | chr4.2:12107652-12107671 | MS.gene53510:intron | 20.0% |
| !! | CATATTATTGTTTATGTTTC+AGG | - | chr4.2:12110871-12110890 | MS.gene53510:intron | 20.0% |
| !! | TAAAATACGAATGAATAGTT+TGG | - | chr4.2:12110147-12110166 | MS.gene53510:intron | 20.0% |
| !! | TGCTATGATATATTTATTGT+GGG | - | chr4.2:12108244-12108263 | MS.gene53510:intron | 20.0% |
| !!! | AATATTTTGTTTTCCAAATC+AGG | - | chr4.2:12110454-12110473 | MS.gene53510:CDS | 20.0% |
| !!! | AATCCAATTTTCAGAAATTA+GGG | + | chr4.2:12110767-12110786 | None:intergenic | 20.0% |
| !!! | ATATTTCACTGTTGATTTTA+TGG | + | chr4.2:12108834-12108853 | None:intergenic | 20.0% |
| !!! | ATCTATTAAGGTTAGTTATT+GGG | - | chr4.2:12109091-12109110 | MS.gene53510:intron | 20.0% |
| !!! | ATGTTGTACTTTTAAGTTTA+TGG | + | chr4.2:12108183-12108202 | None:intergenic | 20.0% |
| !!! | TCCTTTTATTTCTTATTCAT+TGG | - | chr4.2:12109432-12109451 | MS.gene53510:intron | 20.0% |
| !!! | TCTGAAATGTTCTTAATAAT+TGG | - | chr4.2:12108207-12108226 | MS.gene53510:intron | 20.0% |
| ! | AACAACACAACAATGAAAAA+TGG | + | chr4.2:12110832-12110851 | None:intergenic | 25.0% |
| ! | AACGAAACTAGAAATAATTC+CGG | - | chr4.2:12110369-12110388 | MS.gene53510:CDS | 25.0% |
| ! | AATACATTAGAAGTCAATTC+AGG | + | chr4.2:12108343-12108362 | None:intergenic | 25.0% |
| ! | ACTATTTCAGTATATTAGCA+AGG | - | chr4.2:12107686-12107705 | MS.gene53510:intron | 25.0% |
| ! | ACTCATCAATTCAAAACAAA+AGG | - | chr4.2:12109777-12109796 | MS.gene53510:intron | 25.0% |
| ! | ATAAGAAATAAAAGGAAGTG+AGG | + | chr4.2:12109428-12109447 | None:intergenic | 25.0% |
| ! | ATGTGAGTTTCAGATTTAAA+AGG | + | chr4.2:12109254-12109273 | None:intergenic | 25.0% |
| ! | ATTCATAGAAAATCGAATCA+CGG | - | chr4.2:12109702-12109721 | MS.gene53510:intron | 25.0% |
| ! | CAGAGTTTAGAAAACAAAAA+TGG | + | chr4.2:12110432-12110451 | None:intergenic | 25.0% |
| ! | CTAACCTTAATAGATGAAAT+AGG | + | chr4.2:12109086-12109105 | None:intergenic | 25.0% |
| ! | GTGAAAATTATTGAACATGA+AGG | - | chr4.2:12108134-12108153 | MS.gene53510:intron | 25.0% |
| ! | TAAAACAGATTTACTCTTCT+TGG | - | chr4.2:12110541-12110560 | MS.gene53510:CDS | 25.0% |
| ! | TACAGAAGCTATAACAAAAT+TGG | + | chr4.2:12108429-12108448 | None:intergenic | 25.0% |
| ! | TACTGAAATAGTTTCTATGA+TGG | + | chr4.2:12107678-12107697 | None:intergenic | 25.0% |
| ! | TATAATTCTGTAATCACCAT+TGG | + | chr4.2:12108570-12108589 | None:intergenic | 25.0% |
| ! | TATATCGCTAAAATAGACAA+TGG | + | chr4.2:12107621-12107640 | None:intergenic | 25.0% |
| ! | TCAAAGATAAAACACTTACT+CGG | + | chr4.2:12109604-12109623 | None:intergenic | 25.0% |
| ! | TGTTCAAAATGACAACTTAT+TGG | - | chr4.2:12107438-12107457 | MS.gene53510:CDS | 25.0% |
| !! | ACTTTTCTGTTATAAAAGAG+AGG | + | chr4.2:12109032-12109051 | None:intergenic | 25.0% |
| !! | CAATCCAATTTTCAGAAATT+AGG | + | chr4.2:12110768-12110787 | None:intergenic | 25.0% |
| !! | CATCTATTAAGGTTAGTTAT+TGG | - | chr4.2:12109090-12109109 | MS.gene53510:intron | 25.0% |
| !! | CTTTTCTGTTATAAAAGAGA+GGG | + | chr4.2:12109031-12109050 | None:intergenic | 25.0% |
| !!! | ATTCAATAAGTGCTACTTTA+TGG | + | chr4.2:12110126-12110145 | None:intergenic | 25.0% |
| !!! | TGTACTTTTAAGTTTATGGT+TGG | + | chr4.2:12108179-12108198 | None:intergenic | 25.0% |
| !!! | TTAAGTTGAATTACATGACA+CGG | + | chr4.2:12107078-12107097 | None:intergenic | 25.0% |
| !!! | TTTTAAATCTGAAACTCACA+TGG | - | chr4.2:12109253-12109272 | MS.gene53510:intron | 25.0% |
| AAAGAACCAAAACTAACTGA+TGG | + | chr4.2:12109526-12109545 | None:intergenic | 30.0% | |
| AAAGCTTTCGTTACCATTAA+CGG | - | chr4.2:12109919-12109938 | MS.gene53510:intron | 30.0% | |
| AAATGCAACAAAGTTGGAAA+CGG | + | chr4.2:12107596-12107615 | None:intergenic | 30.0% | |
| AACTAAGCCTAACTAACTTT+GGG | + | chr4.2:12108392-12108411 | None:intergenic | 30.0% | |
| ACAATTACCTTAGGTTTAAG+AGG | + | chr4.2:12109349-12109368 | None:intergenic | 30.0% | |
| ATCCAAACTATCTTGTATTC+TGG | - | chr4.2:12108297-12108316 | MS.gene53510:intron | 30.0% | |
| ATGGAAAAATGCAACAAAGT+TGG | + | chr4.2:12107602-12107621 | None:intergenic | 30.0% | |
| ATTTAGTAACTCGTAACTGT+TGG | + | chr4.2:12110180-12110199 | None:intergenic | 30.0% | |
| CTACTCATAACAATTACCTT+AGG | + | chr4.2:12109358-12109377 | None:intergenic | 30.0% | |
| GACTCCTATTTCATCTATTA+AGG | - | chr4.2:12109079-12109098 | MS.gene53510:intron | 30.0% | |
| TAAACATTGTCTCAAACATG+TGG | - | chr4.2:12108032-12108051 | MS.gene53510:intron | 30.0% | |
| TACAGTTAACAGAGAAAACT+GGG | + | chr4.2:12109488-12109507 | None:intergenic | 30.0% | |
| TAGTTAGTATTTGCAAGCTT+CGG | - | chr4.2:12109626-12109645 | MS.gene53510:intron | 30.0% | |
| TATTGTTCCCAAAGTTAGTT+AGG | - | chr4.2:12108382-12108401 | MS.gene53510:intron | 30.0% | |
| TCTATGAATTCTCGTGAAAT+AGG | + | chr4.2:12109691-12109710 | None:intergenic | 30.0% | |
| TGCACAAGACATTAAAATGA+CGG | - | chr4.2:12109821-12109840 | MS.gene53510:intron | 30.0% | |
| TGTTCTTAATAATTGGTGTG+AGG | - | chr4.2:12108214-12108233 | MS.gene53510:intron | 30.0% | |
| TTACAGTTAACAGAGAAAAC+TGG | + | chr4.2:12109489-12109508 | None:intergenic | 30.0% | |
| TTTAGTAACTCGTAACTGTT+GGG | + | chr4.2:12110179-12110198 | None:intergenic | 30.0% | |
| ! | GCTATGAACTGATTCAATTA+TGG | + | chr4.2:12110234-12110253 | None:intergenic | 30.0% |
| ! | TAAGTTGAATTACATGACAC+GGG | + | chr4.2:12107077-12107096 | None:intergenic | 30.0% |
| ! | TGAAATGCACATGACAATTT+TGG | - | chr4.2:12108091-12108110 | MS.gene53510:intron | 30.0% |
| ! | TGTCCCTAATTTCTGAAAAT+TGG | - | chr4.2:12110761-12110780 | MS.gene53510:intron | 30.0% |
| !! | GACAATTTTGGATTTTCAAG+TGG | - | chr4.2:12108103-12108122 | MS.gene53510:intron | 30.0% |
| !!! | ATCTTGTTTTTACAACTTGC+AGG | - | chr4.2:12107846-12107865 | MS.gene53510:intron | 30.0% |
| !!! | TATGATAGAACACTGGTTTT+TGG | + | chr4.2:12109123-12109142 | None:intergenic | 30.0% |
| AACTTGCAAAACAGAAAAGC+AGG | + | chr4.2:12107956-12107975 | None:intergenic | 35.0% | |
| AAGGAGAGTTAGTTGAATTC+AGG | - | chr4.2:12107705-12107724 | MS.gene53510:intron | 35.0% | |
| AAGTTGAATTACATGACACG+GGG | + | chr4.2:12107076-12107095 | None:intergenic | 35.0% | |
| AATGAAAAATGGATGTGCCA+TGG | + | chr4.2:12110821-12110840 | None:intergenic | 35.0% | |
| ACCATAAAGCAATACTGTTG+TGG | - | chr4.2:12108059-12108078 | MS.gene53510:intron | 35.0% | |
| AGTGTGATTAACTAACTGTG+AGG | + | chr4.2:12107022-12107041 | None:intergenic | 35.0% | |
| CAAAACCAACTGCATATAAG+AGG | + | chr4.2:12108679-12108698 | None:intergenic | 35.0% | |
| CAAACTATCTTGTATTCTGG+TGG | - | chr4.2:12108300-12108319 | MS.gene53510:intron | 35.0% | |
| CAATAGACAGGTAACTTAGA+TGG | - | chr4.2:12108805-12108824 | MS.gene53510:intron | 35.0% | |
| CACCAGAATACAAGATAGTT+TGG | + | chr4.2:12108302-12108321 | None:intergenic | 35.0% | |
| CAGTGTTCTATCATAAGTGA+AGG | - | chr4.2:12109128-12109147 | MS.gene53510:intron | 35.0% | |
| CATCTAAGTTACCTGTCTAT+TGG | + | chr4.2:12108807-12108826 | None:intergenic | 35.0% | |
| CCAAGCTTACACTATCTTAA+AGG | + | chr4.2:12110268-12110287 | None:intergenic | 35.0% | |
| CCAAGTAGTAGAATCTGAAA+AGG | - | chr4.2:12109292-12109311 | MS.gene53510:intron | 35.0% | |
| CCATAAAGCAATACTGTTGT+GGG | - | chr4.2:12108060-12108079 | MS.gene53510:intron | 35.0% | |
| CTGTTATAAAAGAGAGGGAA+GGG | + | chr4.2:12109026-12109045 | None:intergenic | 35.0% | |
| CTTCACTTATGATAGAACAC+TGG | + | chr4.2:12109130-12109149 | None:intergenic | 35.0% | |
| CTTGTGTATGCAAATTTCCA+CGG | + | chr4.2:12107801-12107820 | None:intergenic | 35.0% | |
| GAACTAAGCCTAACTAACTT+TGG | + | chr4.2:12108393-12108412 | None:intergenic | 35.0% | |
| GTGTGATTAACTAACTGTGA+GGG | + | chr4.2:12107021-12107040 | None:intergenic | 35.0% | |
| GTTACCATTAACGGAAAACT+GGG | - | chr4.2:12109928-12109947 | MS.gene53510:intron | 35.0% | |
| GTTACGAGTTACTAAATGCA+TGG | - | chr4.2:12110183-12110202 | MS.gene53510:intron | 35.0% | |
| GTTGTGAGAAAAGTTATTGC+TGG | + | chr4.2:12110395-12110414 | None:intergenic | 35.0% | |
| TAAAACTGATGCCTTTGCTA+TGG | - | chr4.2:12109575-12109594 | MS.gene53510:intron | 35.0% | |
| TAGTTAGGCTTAGTTCAGTT+AGG | - | chr4.2:12108397-12108416 | MS.gene53510:intron | 35.0% | |
| TCTATCATAAGTGAAGGAAC+TGG | - | chr4.2:12109134-12109153 | MS.gene53510:CDS | 35.0% | |
| TCTGTTATAAAAGAGAGGGA+AGG | + | chr4.2:12109027-12109046 | None:intergenic | 35.0% | |
| TCTTGTGTAAAACCAAGCTT+TGG | + | chr4.2:12107771-12107790 | None:intergenic | 35.0% | |
| TTTCTCCTCTTATATGCAGT+TGG | - | chr4.2:12108671-12108690 | MS.gene53510:intron | 35.0% | |
| TTTGGCTGGCATTAAGAAAT+CGG | + | chr4.2:12107753-12107772 | None:intergenic | 35.0% | |
| ! | AAGCACTGTTGAATGAAGAT+TGG | - | chr4.2:12109207-12109226 | MS.gene53510:CDS | 35.0% |
| ! | AAGCTTGGCATTGTTATTAG+CGG | - | chr4.2:12110280-12110299 | MS.gene53510:intron | 35.0% |
| ! | ATAACTGAGCTGATTTCTTG+TGG | - | chr4.2:12108596-12108615 | MS.gene53510:intron | 35.0% |
| ! | CCTTTTCAGATTCTACTACT+TGG | + | chr4.2:12109295-12109314 | None:intergenic | 35.0% |
| ! | TAAATCTGAAACTCACATGG+TGG | - | chr4.2:12109256-12109275 | MS.gene53510:intron | 35.0% |
| ! | TAAGGTTAGTTATTGGGCTT+AGG | - | chr4.2:12109097-12109116 | MS.gene53510:intron | 35.0% |
| ! | TTTTGCCAAGAAATCCAAGA+GGG | - | chr4.2:12107375-12107394 | MS.gene53510:intron | 35.0% |
| !! | ACCTTTGTTGGTCTTGTATA+CGG | - | chr4.2:12110897-12110916 | MS.gene53510:intron | 35.0% |
| !! | ATCTGAAAAGGAAGCATTGA+AGG | - | chr4.2:12109304-12109323 | MS.gene53510:intron | 35.0% |
| !! | CCTTTAAGATAGTGTAAGCT+TGG | - | chr4.2:12110265-12110284 | MS.gene53510:intron | 35.0% |
| !! | GTGAAATAGGAAGTGTTTGA+CGG | + | chr4.2:12109678-12109697 | None:intergenic | 35.0% |
| !! | GTTTTAACCTCACTAATTCC+AGG | + | chr4.2:12110527-12110546 | None:intergenic | 35.0% |
| !!! | ATCTTTGGTGTTTTGCACAT+AGG | - | chr4.2:12110703-12110722 | MS.gene53510:intron | 35.0% |
| !!! | ATGCAGTTGGTTTTGAAATG+TGG | - | chr4.2:12108684-12108703 | MS.gene53510:intron | 35.0% |
| AACGAAAGCTTTCAAGCCAT+TGG | + | chr4.2:12109911-12109930 | None:intergenic | 40.0% | |
| AATTCCAGGCAAAACTGCAA+CGG | + | chr4.2:12110513-12110532 | None:intergenic | 40.0% | |
| ACCAAAACTAACTGATGGCT+CGG | + | chr4.2:12109521-12109540 | None:intergenic | 40.0% | |
| ACGAAAGCTTTCAAGCCATT+GGG | + | chr4.2:12109910-12109929 | None:intergenic | 40.0% | |
| ACTATCTTGTATTCTGGTGG+TGG | - | chr4.2:12108303-12108322 | MS.gene53510:intron | 40.0% | |
| AGCCTCCAAAGGTAATTGTT+AGG | + | chr4.2:12110069-12110088 | None:intergenic | 40.0% | |
| ATCAGTCATGTCGTGTAACA+AGG | - | chr4.2:12109738-12109757 | MS.gene53510:intron | 40.0% | |
| ATCCTACCATCTTGAATTCC+AGG | - | chr4.2:12110609-12110628 | MS.gene53510:intron | 40.0% | |
| ATGAGCTTAGAGCTCTACAA+TGG | - | chr4.2:12108875-12108894 | MS.gene53510:intron | 40.0% | |
| CACAGATCCTCTTAAACCTA+AGG | - | chr4.2:12109339-12109358 | MS.gene53510:intron | 40.0% | |
| CATGGAGAGGATACGATAAA+AGG | + | chr4.2:12110803-12110822 | None:intergenic | 40.0% | |
| CCCACAACAGTATTGCTTTA+TGG | + | chr4.2:12108063-12108082 | None:intergenic | 40.0% | |
| CGGCAATATAATCCAAAGGT+TGG | + | chr4.2:12110493-12110512 | None:intergenic | 40.0% | |
| CGTTACCATTAACGGAAAAC+TGG | - | chr4.2:12109927-12109946 | MS.gene53510:intron | 40.0% | |
| CTATCTTGTATTCTGGTGGT+GGG | - | chr4.2:12108304-12108323 | MS.gene53510:intron | 40.0% | |
| CTCCTAACAATTACCTTTGG+AGG | - | chr4.2:12110064-12110083 | MS.gene53510:intron | 40.0% | |
| GAAACTATTCCTTTGCCATC+TGG | - | chr4.2:12110734-12110753 | MS.gene53510:intron | 40.0% | |
| GAGAGATCTACAGATGTATC+AGG | + | chr4.2:12107406-12107425 | None:intergenic | 40.0% | |
| GCAACGGCAATATAATCCAA+AGG | + | chr4.2:12110497-12110516 | None:intergenic | 40.0% | |
| GCACTCCTAACAATTACCTT+TGG | - | chr4.2:12110061-12110080 | MS.gene53510:CDS | 40.0% | |
| GTAGTTCCTGGAATTCAAGA+TGG | + | chr4.2:12110618-12110637 | None:intergenic | 40.0% | |
| TCACTAGACTCAGCAAAATC+CGG | + | chr4.2:12108779-12108798 | None:intergenic | 40.0% | |
| TCCGTATACAAGACCAACAA+AGG | + | chr4.2:12110901-12110920 | None:intergenic | 40.0% | |
| TCTCATGTTGCGTCAATAGA+AGG | - | chr4.2:12107871-12107890 | MS.gene53510:intron | 40.0% | |
| TGAGAAAAGTTATTGCTGGC+CGG | + | chr4.2:12110391-12110410 | None:intergenic | 40.0% | |
| TGAGACAAGTGCATAAGAGA+AGG | - | chr4.2:12109976-12109995 | MS.gene53510:intron | 40.0% | |
| TGCGTGAGAATCAATAATCG+TGG | - | chr4.2:12110016-12110035 | MS.gene53510:intron | 40.0% | |
| TGGCATCTTGAGATGATTAC+AGG | - | chr4.2:12108704-12108723 | MS.gene53510:intron | 40.0% | |
| TTACACAAGATTGTTAGCCG+TGG | - | chr4.2:12107781-12107800 | MS.gene53510:intron | 40.0% | |
| TTCAGATTCTACTACTTGGC+AGG | + | chr4.2:12109291-12109310 | None:intergenic | 40.0% | |
| TTCCTGGAATTCAAGATGGT+AGG | + | chr4.2:12110614-12110633 | None:intergenic | 40.0% | |
| TTGATGAGTGACTACAGTGT+TGG | + | chr4.2:12109766-12109785 | None:intergenic | 40.0% | |
| TTGTTAGGAGAGTTTCTCTC+TGG | + | chr4.2:12108969-12108988 | None:intergenic | 40.0% | |
| ! | AATGAACTGGACGAGTATTG+CGG | - | chr4.2:12110669-12110688 | MS.gene53510:intron | 40.0% |
| ! | AGTTTTGCCTGGAATTAGTG+AGG | - | chr4.2:12110517-12110536 | MS.gene53510:CDS | 40.0% |
| ! | ATTACCTTTGGAGGCTTAAG+AGG | - | chr4.2:12110073-12110092 | MS.gene53510:intron | 40.0% |
| ! | CTTTTATCGTATCCTCTCCA+TGG | - | chr4.2:12110801-12110820 | MS.gene53510:intron | 40.0% |
| ! | CTTTTGCCAAGAAATCCAAG+AGG | - | chr4.2:12107374-12107393 | MS.gene53510:intron | 40.0% |
| ! | TGCGTGAGAATTGATAATCG+TGG | + | chr4.2:12109402-12109421 | None:intergenic | 40.0% |
| !! | AAATAGGAAGTGTTTGACGG+AGG | + | chr4.2:12109675-12109694 | None:intergenic | 40.0% |
| !! | ACTTCTCTGAAGCTAACCAA+TGG | - | chr4.2:12108551-12108570 | MS.gene53510:intron | 40.0% |
| !! | CAAAGTTGGAAACGGATTGA+AGG | + | chr4.2:12107588-12107607 | None:intergenic | 40.0% |
| !! | GCTCTTTGCTATTGAAGACT+TGG | - | chr4.2:12108753-12108772 | MS.gene53510:intron | 40.0% |
| !! | TAAGAGCATTATGCTCTGGT+AGG | + | chr4.2:12108945-12108964 | None:intergenic | 40.0% |
| !! | TGGTTAAGAGCATTATGCTC+TGG | + | chr4.2:12108949-12108968 | None:intergenic | 40.0% |
| !! | TTTGCTATTGAAGACTTGGC+CGG | - | chr4.2:12108757-12108776 | MS.gene53510:intron | 40.0% |
| !!! | GGATTTTCAAGTGGTATCAC+AGG | - | chr4.2:12108112-12108131 | MS.gene53510:intron | 40.0% |
| !!! | GTGGTTTTGGTTCTCTTCTT+GGG | + | chr4.2:12109888-12109907 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTTCTCTTCTTG+GGG | + | chr4.2:12109887-12109906 | None:intergenic | 40.0% |
| AAAATGGATGTGCCATGGAG+AGG | + | chr4.2:12110816-12110835 | None:intergenic | 45.0% | |
| AAAGCTTTCAAGCCATTGGG+TGG | + | chr4.2:12109907-12109926 | None:intergenic | 45.0% | |
| AATAGAAGGATTGCCGGTCT+TGG | - | chr4.2:12107885-12107904 | MS.gene53510:intron | 45.0% | |
| AATTAGGGACATGCACCAGA+TGG | + | chr4.2:12110752-12110771 | None:intergenic | 45.0% | |
| AGAGAACCAAAACCACCCAA+TGG | - | chr4.2:12109892-12109911 | MS.gene53510:intron | 45.0% | |
| AGAGAGCTAAGGACCTGATT+TGG | + | chr4.2:12110470-12110489 | None:intergenic | 45.0% | |
| AGCTTAGAGCTCTACAATGG+TGG | - | chr4.2:12108878-12108897 | MS.gene53510:intron | 45.0% | |
| AGTGCATAAGAGAAGGAAGC+AGG | - | chr4.2:12109983-12110002 | MS.gene53510:intron | 45.0% | |
| AGTGTGCGAGAGATAAAGCA+TGG | + | chr4.2:12106930-12106949 | None:intergenic | 45.0% | |
| ATGCTAACCCTATTCCTTCC+AGG | - | chr4.2:12107488-12107507 | MS.gene53510:intron | 45.0% | |
| ATTAACGGAAAACTGGGAGC+AGG | - | chr4.2:12109934-12109953 | MS.gene53510:intron | 45.0% | |
| CAGTGAACAACCTGATAGGA+GGG | - | chr4.2:12110970-12110989 | MS.gene53510:CDS | 45.0% | |
| CATGCAGTGAACAACCTGAT+AGG | - | chr4.2:12110966-12110985 | MS.gene53510:CDS | 45.0% | |
| GATAGTACTACAGCAACTCC+AGG | + | chr4.2:12106960-12106979 | None:intergenic | 45.0% | |
| GCTTAGAGCTCTACAATGGT+GGG | - | chr4.2:12108879-12108898 | MS.gene53510:intron | 45.0% | |
| GTCCAGTTCATTCCCAAAAG+TGG | + | chr4.2:12110661-12110680 | None:intergenic | 45.0% | |
| TAACAGAGAAAACTGGGAGC+AGG | + | chr4.2:12109482-12109501 | None:intergenic | 45.0% | |
| TAGTGAAGCAGCCAATAGAC+AGG | - | chr4.2:12108793-12108812 | MS.gene53510:intron | 45.0% | |
| TCCTTCCCTCTTGGATTTCT+TGG | + | chr4.2:12107383-12107402 | None:intergenic | 45.0% | |
| TCTTAATGCCAGCCAAAGCT+TGG | - | chr4.2:12107756-12107775 | MS.gene53510:intron | 45.0% | |
| TGCATGCACGTTATAAGTCG+TGG | - | chr4.2:12110097-12110116 | MS.gene53510:intron | 45.0% | |
| TGCGTCAATAGAAGGATTGC+CGG | - | chr4.2:12107879-12107898 | MS.gene53510:intron | 45.0% | |
| TGGGAACAATAGTGACTGTG+TGG | + | chr4.2:12108373-12108392 | None:intergenic | 45.0% | |
| TGTCACACTGTCATTGCAGT+TGG | - | chr4.2:12109179-12109198 | MS.gene53510:CDS | 45.0% | |
| TGTTTCAGGGCAACCTTTGT+TGG | - | chr4.2:12110885-12110904 | MS.gene53510:intron | 45.0% | |
| TTACTCGGACACCATAGCAA+AGG | + | chr4.2:12109589-12109608 | None:intergenic | 45.0% | |
| TTCACTGCATGAGAAGCCAT+GGG | + | chr4.2:12110957-12110976 | None:intergenic | 45.0% | |
| ! | ACCTGATAGGAGGGCTTTTA+TGG | - | chr4.2:12110979-12110998 | MS.gene53510:CDS | 45.0% |
| ! | GCGGTAGCTGCTTTAATCTT+TGG | - | chr4.2:12110688-12110707 | MS.gene53510:intron | 45.0% |
| ! | GGGTTAGCATTCTCAACAAG+TGG | + | chr4.2:12107478-12107497 | None:intergenic | 45.0% |
| ! | GGTGTTTTGCACATAGGCAA+TGG | - | chr4.2:12110709-12110728 | MS.gene53510:intron | 45.0% |
| ! | GTGTAAAACCAAGCTTTGGC+TGG | + | chr4.2:12107767-12107786 | None:intergenic | 45.0% |
| ! | TGATAGGAGGGCTTTTATGG+CGG | - | chr4.2:12110982-12111001 | MS.gene53510:CDS | 45.0% |
| ! | TGCTCCCAGTTTTCCGTTAA+TGG | + | chr4.2:12109935-12109954 | None:intergenic | 45.0% |
| ! | TTCAAGCCATTGGGTGGTTT+TGG | + | chr4.2:12109901-12109920 | None:intergenic | 45.0% |
| !! | AAACGGATTGAAGGAGAACC+TGG | + | chr4.2:12107579-12107598 | None:intergenic | 45.0% |
| !! | AGGAAGCATTGAAGGTGAAG+TGG | - | chr4.2:12109312-12109331 | MS.gene53510:intron | 45.0% |
| !! | CAAGCTTGCATACTGACTTC+TGG | - | chr4.2:12107523-12107542 | MS.gene53510:intron | 45.0% |
| !! | TCCGAGCCATCAGTTAGTTT+TGG | - | chr4.2:12109517-12109536 | MS.gene53510:intron | 45.0% |
| !! | TCTGGTCTCATTGCTGCTTT+CGG | - | chr4.2:12107541-12107560 | MS.gene53510:intron | 45.0% |
| !! | TTCCAGGAACTACTTTTCCG+CGG | - | chr4.2:12110625-12110644 | MS.gene53510:intron | 45.0% |
| !!! | GGTGGTTTTGGTTCTCTTCT+TGG | + | chr4.2:12109889-12109908 | None:intergenic | 45.0% |
| !!! | TGCCACTTTTGGGAATGAAC+TGG | - | chr4.2:12110656-12110675 | MS.gene53510:intron | 45.0% |
| !!! | TATAATATTCAAATTTTAAA+TGG | + | chr4.2:12110310-12110329 | None:intergenic | 5.0% |
| ACAGCACTCCTGGAAGGAAT+AGG | + | chr4.2:12107499-12107518 | None:intergenic | 50.0% | |
| ACTGTGAGGGAGAGTGATGA+AGG | + | chr4.2:12107008-12107027 | None:intergenic | 50.0% | |
| CAGCACTCCTGGAAGGAATA+GGG | + | chr4.2:12107498-12107517 | None:intergenic | 50.0% | |
| CCAAAGGTTGGAGAGAGCTA+AGG | + | chr4.2:12110481-12110500 | None:intergenic | 50.0% | |
| GAAGGGTAGTGTGTAACTCG+TGG | + | chr4.2:12109009-12109028 | None:intergenic | 50.0% | |
| GCAGTGAACAACCTGATAGG+AGG | - | chr4.2:12110969-12110988 | MS.gene53510:CDS | 50.0% | |
| GCATCCTCTTAAGCCTCCAA+AGG | + | chr4.2:12110080-12110099 | None:intergenic | 50.0% | |
| GCCAAGAAATCCAAGAGGGA+AGG | - | chr4.2:12107379-12107398 | MS.gene53510:intron | 50.0% | |
| GCCATAAAAGCCCTCCTATC+AGG | + | chr4.2:12110983-12111002 | None:intergenic | 50.0% | |
| GTTCACTGCATGAGAAGCCA+TGG | + | chr4.2:12110958-12110977 | None:intergenic | 50.0% | |
| TCTCGCACACTCTCAATTCC+TGG | - | chr4.2:12106939-12106958 | MS.gene53510:CDS | 50.0% | |
| TCTGTAGAGCAGTCCAAGAC+CGG | + | chr4.2:12107901-12107920 | None:intergenic | 50.0% | |
| TGTATCAGGTCCTTCCCTCT+TGG | + | chr4.2:12107392-12107411 | None:intergenic | 50.0% | |
| ! | ATTGCCGTTGCAGTTTTGCC+TGG | - | chr4.2:12110506-12110525 | MS.gene53510:CDS | 50.0% |
| ! | CCTTAGCTCTCTCCAACCTT+TGG | - | chr4.2:12110478-12110497 | MS.gene53510:CDS | 50.0% |
| !! | CTGGTCTCATTGCTGCTTTC+GGG | - | chr4.2:12107542-12107561 | MS.gene53510:intron | 50.0% |
| AGCTTGAAGCACAGCACTCC+TGG | + | chr4.2:12107509-12107528 | None:intergenic | 55.0% | |
| CATGGGAACTGCAAGGCTAG+AGG | + | chr4.2:12110940-12110959 | None:intergenic | 55.0% | |
| GAGAAGCCATGGGAACTGCA+AGG | + | chr4.2:12110947-12110966 | None:intergenic | 55.0% | |
| GGACATGCACCAGATGGCAA+AGG | + | chr4.2:12110746-12110765 | None:intergenic | 55.0% | |
| TGAAGCACAGCACTCCTGGA+AGG | + | chr4.2:12107505-12107524 | None:intergenic | 55.0% | |
| TTTCGGGACAGTGATTCGCC+AGG | - | chr4.2:12107558-12107577 | MS.gene53510:intron | 55.0% | |
| !! | CTCTAGCCTTGCAGTTCCCA+TGG | - | chr4.2:12110938-12110957 | MS.gene53510:CDS | 55.0% |
| !! | TGGTAGGAGTGTTCGCACTC+TGG | + | chr4.2:12108929-12108948 | None:intergenic | 55.0% |
| !!! | GGCGCAGTTCTGCCACTTTT+GGG | - | chr4.2:12110646-12110665 | MS.gene53510:intron | 55.0% |
| AAAGTGGCAGAACTGCGCCG+CGG | + | chr4.2:12110645-12110664 | None:intergenic | 60.0% | |
| CGCCGCGGAAAAGTAGTTCC+TGG | + | chr4.2:12110630-12110649 | None:intergenic | 60.0% | |
| CTGCTCCCGAGATCCTGTCT+CGG | - | chr4.2:12109858-12109877 | MS.gene53510:intron | 60.0% | |
| CTTCTTGGGGTCACCGAGAC+AGG | + | chr4.2:12109874-12109893 | None:intergenic | 60.0% | |
| GGGTCACCGAGACAGGATCT+CGG | + | chr4.2:12109867-12109886 | None:intergenic | 60.0% | |
| GGTCACCGAGACAGGATCTC+GGG | + | chr4.2:12109866-12109885 | None:intergenic | 60.0% | |
| !!! | CGGCGCAGTTCTGCCACTTT+TGG | - | chr4.2:12110645-12110664 | MS.gene53510:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 12106923 | 12111025 | 12106923 | ID=MS.gene53510 |
| chr4.2 | mRNA | 12106923 | 12111025 | 12106923 | ID=MS.gene53510.t1;Parent=MS.gene53510 |
| chr4.2 | exon | 12110923 | 12111025 | 12110923 | ID=MS.gene53510.t1.exon1;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12110923 | 12111025 | 12110923 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12110369 | 12110595 | 12110369 | ID=MS.gene53510.t1.exon2;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12110369 | 12110595 | 12110369 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12110020 | 12110080 | 12110020 | ID=MS.gene53510.t1.exon3;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12110020 | 12110080 | 12110020 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12109134 | 12109258 | 12109134 | ID=MS.gene53510.t1.exon4;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12109134 | 12109258 | 12109134 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12107410 | 12107472 | 12107410 | ID=MS.gene53510.t1.exon5;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12107410 | 12107472 | 12107410 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12107193 | 12107317 | 12107193 | ID=MS.gene53510.t1.exon6;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12107193 | 12107317 | 12107193 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| chr4.2 | exon | 12106923 | 12107055 | 12106923 | ID=MS.gene53510.t1.exon7;Parent=MS.gene53510.t1 |
| chr4.2 | CDS | 12106923 | 12107055 | 12106923 | ID=cds.MS.gene53510.t1;Parent=MS.gene53510.t1 |
| Gene Sequence |
| Protein sequence |
