Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030761.01.T01 | XP_003618480.2 | 96.981 | 265 | 8 | 0 | 1 | 265 | 1 | 265 | 0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030761.01.T01 | P07369 | 90.637 | 267 | 23 | 2 | 1 | 265 | 1 | 267 | 1.52E-178 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030761.01.T01 | G7KKG9 | 96.981 | 265 | 8 | 0 | 1 | 265 | 1 | 265 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047910.01 | MsG0680030761.01 | 0.815783 | 7.746565e-52 | 5.391983e-49 |
| MsG0080047945.01 | MsG0680030761.01 | 0.819649 | 1.039740e-52 | 8.048296e-50 |
| MsG0080048059.01 | MsG0680030761.01 | 0.854181 | 1.460743e-61 | 3.235312e-58 |
| MsG0080048917.01 | MsG0680030761.01 | 0.857498 | 1.566618e-62 | 3.874612e-59 |
| MsG0080048978.01 | MsG0680030761.01 | 0.820191 | 7.815421e-53 | 6.142058e-50 |
| MsG0080049015.01 | MsG0680030761.01 | 0.817272 | 3.593341e-52 | 2.604876e-49 |
| MsG0080049053.01 | MsG0680030761.01 | 0.832950 | 7.055643e-56 | 8.007606e-53 |
| MsG0180000193.01 | MsG0680030761.01 | 0.832531 | 8.964559e-56 | 1.004747e-52 |
| MsG0180000194.01 | MsG0680030761.01 | 0.838646 | 2.541997e-57 | 3.426572e-54 |
| MsG0180000306.01 | MsG0680030761.01 | 0.802361 | 5.817829e-49 | 2.844475e-46 |
| MsG0180000325.01 | MsG0680030761.01 | 0.825789 | 3.869683e-54 | 3.562804e-51 |
| MsG0180000467.01 | MsG0680030761.01 | 0.817315 | 3.515380e-52 | 2.551407e-49 |
| MsG0180000878.01 | MsG0680030761.01 | 0.832355 | 9.909025e-56 | 1.104843e-52 |
| MsG0180001111.01 | MsG0680030761.01 | 0.805375 | 1.376008e-49 | 7.268097e-47 |
| MsG0180003296.01 | MsG0680030761.01 | 0.866780 | 2.220354e-65 | 7.574708e-62 |
| MsG0180003757.01 | MsG0680030761.01 | 0.822434 | 2.374100e-53 | 1.986971e-50 |
| MsG0180003779.01 | MsG0680030761.01 | 0.838620 | 2.580770e-57 | 3.476114e-54 |
| MsG0180003904.01 | MsG0680030761.01 | 0.855752 | 5.108466e-62 | 1.191859e-58 |
| MsG0180003985.01 | MsG0680030761.01 | 0.819264 | 1.272298e-52 | 9.743458e-50 |
| MsG0180004177.01 | MsG0680030761.01 | 0.844865 | 5.801723e-59 | 9.492864e-56 |
| MsG0180004292.01 | MsG0680030761.01 | 0.808516 | 2.980949e-50 | 1.707906e-47 |
| MsG0180004554.01 | MsG0680030761.01 | 0.800826 | 1.200909e-48 | 5.647029e-46 |
| MsG0180004739.01 | MsG0680030761.01 | 0.809462 | 1.869440e-50 | 1.098306e-47 |
| MsG0180005291.01 | MsG0680030761.01 | 0.826298 | 2.929719e-54 | 2.736537e-51 |
| MsG0180006212.01 | MsG0680030761.01 | 0.816598 | 5.091464e-52 | 3.623555e-49 |
| MsG0280006336.01 | MsG0680030761.01 | 0.854235 | 1.408978e-61 | 3.126201e-58 |
| MsG0280006452.01 | MsG0680030761.01 | 0.859577 | 3.756894e-63 | 9.968891e-60 |
| MsG0280010704.01 | MsG0680030761.01 | 0.872948 | 2.148309e-67 | 9.157588e-64 |
| MsG0280011200.01 | MsG0680030761.01 | 0.802589 | 5.221481e-49 | 2.567635e-46 |
| MsG0280011276.01 | MsG0680030761.01 | 0.809499 | 1.835652e-50 | 1.079523e-47 |
| MsG0280011301.01 | MsG0680030761.01 | 0.839076 | 1.967061e-57 | 2.686350e-54 |
| MsG0380011896.01 | MsG0680030761.01 | 0.837492 | 5.035180e-57 | 6.551750e-54 |
| MsG0380012065.01 | MsG0680030761.01 | 0.820542 | 6.493478e-53 | 5.152740e-50 |
| MsG0380012281.01 | MsG0680030761.01 | 0.826505 | 2.615220e-54 | 2.457181e-51 |
| MsG0380012779.01 | MsG0680030761.01 | 0.813533 | 2.438929e-51 | 1.596912e-48 |
| MsG0380012780.01 | MsG0680030761.01 | 0.838689 | 2.477631e-57 | 3.344071e-54 |
| MsG0380012801.01 | MsG0680030761.01 | 0.848622 | 5.450136e-60 | 1.006116e-56 |
| MsG0380013128.01 | MsG0680030761.01 | 0.846331 | 2.323442e-59 | 3.984923e-56 |
| MsG0380013473.01 | MsG0680030761.01 | 0.812074 | 5.090130e-51 | 3.204727e-48 |
| MsG0380013506.01 | MsG0680030761.01 | 0.823045 | 1.711181e-53 | 1.457231e-50 |
| MsG0380014266.01 | MsG0680030761.01 | 0.804225 | 2.392325e-49 | 1.226710e-46 |
| MsG0680030756.01 | MsG0680030761.01 | 0.880457 | 5.403421e-70 | 3.047398e-66 |
| MsG0680030757.01 | MsG0680030761.01 | 0.921737 | 2.435035e-88 | 8.855740e-84 |
| MsG0680030758.01 | MsG0680030761.01 | 0.911947 | 3.412514e-83 | 7.493526e-79 |
| MsG0680030759.01 | MsG0680030761.01 | 0.946134 | 8.233008e-105 | 1.320676e-99 |
| MsG0680030760.01 | MsG0680030761.01 | 0.906302 | 1.716182e-80 | 2.888820e-76 |
| MsG0680030761.01 | MsG0680031813.01 | 0.814807 | 1.276438e-51 | 8.650581e-49 |
| MsG0680030761.01 | MsG0680032055.01 | 0.809080 | 2.258247e-50 | 1.313261e-47 |
| MsG0680030761.01 | MsG0680032840.01 | 0.800149 | 1.650088e-48 | 7.627044e-46 |
| MsG0680030761.01 | MsG0680033007.01 | 0.810540 | 1.095614e-50 | 6.621962e-48 |
| MsG0680030761.01 | MsG0680034229.01 | 0.826371 | 2.814439e-54 | 2.634534e-51 |
| MsG0680030761.01 | MsG0680034419.01 | 0.830405 | 2.992453e-55 | 3.149678e-52 |
| MsG0680030761.01 | MsG0780036064.01 | 0.865309 | 6.484609e-65 | 2.099895e-61 |
| MsG0680030761.01 | MsG0780036068.01 | 0.867768 | 1.072608e-65 | 3.788602e-62 |
| MsG0680030761.01 | MsG0780036909.01 | 0.827466 | 1.540636e-54 | 1.488612e-51 |
| MsG0680030761.01 | MsG0780038496.01 | 0.818030 | 2.424941e-52 | 1.794762e-49 |
| MsG0680030761.01 | MsG0780038807.01 | 0.801467 | 8.883074e-49 | 4.245233e-46 |
| MsG0680030761.01 | MsG0780039859.01 | 0.800077 | 1.706716e-48 | 7.874485e-46 |
| MsG0680030761.01 | MsG0780039860.01 | 0.802276 | 6.058229e-49 | 2.955434e-46 |
| MsG0680030761.01 | MsG0780040121.01 | 0.842620 | 2.313008e-58 | 3.526882e-55 |
| MsG0680030761.01 | MsG0780040283.01 | 0.803396 | 3.556805e-49 | 1.785440e-46 |
| MsG0680030761.01 | MsG0780040352.01 | 0.815861 | 7.441249e-52 | 5.190000e-49 |
| MsG0680030761.01 | MsG0780040567.01 | 0.842856 | 2.002666e-58 | 3.076235e-55 |
| MsG0680030761.01 | MsG0780040702.01 | 0.818840 | 1.588783e-52 | 1.202600e-49 |
| MsG0680030761.01 | MsG0780041106.01 | 0.817670 | 2.923674e-52 | 2.142808e-49 |
| MsG0680030761.01 | MsG0780041173.01 | 0.825840 | 3.764909e-54 | 3.471350e-51 |
| MsG0680030761.01 | MsG0780041480.01 | 0.827066 | 1.920252e-54 | 1.833787e-51 |
| MsG0680030761.01 | MsG0780041620.01 | 0.801395 | 9.187992e-49 | 4.383004e-46 |
| MsG0680030761.01 | MsG0780041720.01 | 0.815880 | 7.369231e-52 | 5.142381e-49 |
| MsG0680030761.01 | MsG0780041792.01 | 0.814274 | 1.674670e-51 | 1.118709e-48 |
| MsG0680030761.01 | MsG0780041809.01 | 0.800028 | 1.746401e-48 | 8.047444e-46 |
| MsG0680030761.01 | MsG0880041855.01 | 0.826661 | 2.399803e-54 | 2.264991e-51 |
| MsG0680030761.01 | MsG0880042500.01 | 0.808545 | 2.938771e-50 | 1.685017e-47 |
| MsG0680030761.01 | MsG0880042858.01 | 0.809555 | 1.786183e-50 | 1.051985e-47 |
| MsG0680030761.01 | MsG0880042889.01 | 0.818171 | 2.252807e-52 | 1.673921e-49 |
| MsG0680030761.01 | MsG0880043032.01 | 0.846108 | 2.671153e-59 | 4.548558e-56 |
| MsG0680030761.01 | MsG0880043148.01 | 0.832165 | 1.104362e-55 | 1.224343e-52 |
| MsG0680030761.01 | MsG0880044352.01 | 0.827967 | 1.167780e-54 | 1.144932e-51 |
| MsG0680030761.01 | MsG0880045188.01 | 0.816689 | 4.858175e-52 | 3.465993e-49 |
| MsG0680030761.01 | MsG0880045413.01 | 0.811371 | 7.239261e-51 | 4.473182e-48 |
| MsG0680030761.01 | MsG0880045414.01 | 0.801475 | 8.849692e-49 | 4.230243e-46 |
| MsG0680030761.01 | MsG0880045778.01 | 0.845531 | 3.831396e-59 | 6.404132e-56 |
| MsG0680030761.01 | MsG0880046041.01 | 0.820682 | 6.027503e-53 | 4.801376e-50 |
| MsG0680030761.01 | MsG0880046104.01 | 0.844953 | 5.491813e-59 | 9.011660e-56 |
| MsG0680030761.01 | MsG0880046219.01 | 0.814106 | 1.823651e-51 | 1.212666e-48 |
| MsG0680030761.01 | MsG0880046462.01 | 0.887008 | 2.080211e-72 | 1.520448e-68 |
| MsG0680030761.01 | MsG0880046805.01 | 0.804992 | 1.654727e-49 | 8.654777e-47 |
| MsG0680030761.01 | MsG0880047318.01 | 0.831766 | 1.385906e-55 | 1.518864e-52 |
| MsG0680030761.01 | MsG0880047363.01 | 0.849663 | 2.798748e-60 | 5.344762e-57 |
| MsG0680030761.01 | MsG0880047536.01 | 0.801193 | 1.010567e-48 | 4.796425e-46 |
| MsG0680030761.01 | MsG0880047616.01 | 0.802577 | 5.252873e-49 | 2.582162e-46 |
| MsG0680030761.01 | MsG0880047628.01 | 0.832141 | 1.119516e-55 | 1.240284e-52 |
| MsG0680030761.01 | MsG0880047661.01 | 0.830197 | 3.363257e-55 | 3.519064e-52 |
| MsG0480018626.01 | MsG0680030761.01 | 0.814384 | 1.583441e-51 | 1.060989e-48 |
| MsG0480018628.01 | MsG0680030761.01 | 0.828738 | 7.609264e-55 | 7.628795e-52 |
| MsG0480020496.01 | MsG0680030761.01 | 0.848232 | 6.985954e-60 | 1.273473e-56 |
| MsG0480021054.01 | MsG0680030761.01 | 0.801784 | 7.647126e-49 | 3.684012e-46 |
| MsG0480021143.01 | MsG0680030761.01 | 0.835213 | 1.912636e-56 | 2.323325e-53 |
| MsG0480021205.01 | MsG0680030761.01 | 0.833938 | 3.998999e-56 | 4.675523e-53 |
| MsG0480021254.01 | MsG0680030761.01 | 0.806227 | 9.111912e-50 | 4.919412e-47 |
| MsG0480021521.01 | MsG0680030761.01 | 0.812667 | 3.778684e-51 | 2.417052e-48 |
| MsG0480022286.01 | MsG0680030761.01 | 0.820646 | 6.144659e-53 | 4.889681e-50 |
| MsG0480022295.01 | MsG0680030761.01 | 0.893414 | 6.426991e-75 | 6.114424e-71 |
| MsG0480022366.01 | MsG0680030761.01 | 0.827653 | 1.388867e-54 | 1.349147e-51 |
| MsG0480022417.01 | MsG0680030761.01 | 0.814826 | 1.264163e-51 | 8.571569e-49 |
| MsG0480022466.01 | MsG0680030761.01 | 0.846233 | 2.469887e-59 | 4.222805e-56 |
| MsG0480022765.01 | MsG0680030761.01 | 0.830542 | 2.770312e-55 | 2.927460e-52 |
| MsG0480022837.01 | MsG0680030761.01 | 0.822097 | 2.841523e-53 | 2.355202e-50 |
| MsG0480023187.01 | MsG0680030761.01 | 0.857316 | 1.773378e-62 | 4.358797e-59 |
| MsG0480023217.01 | MsG0680030761.01 | 0.806825 | 6.815556e-50 | 3.736217e-47 |
| MsG0480023558.01 | MsG0680030761.01 | 0.851810 | 6.961875e-61 | 1.425908e-57 |
| MsG0480023881.01 | MsG0680030761.01 | 0.812613 | 3.881193e-51 | 2.479187e-48 |
| MsG0580024128.01 | MsG0680030761.01 | 0.830871 | 2.300499e-55 | 2.454880e-52 |
| MsG0580024140.01 | MsG0680030761.01 | 0.812583 | 3.941429e-51 | 2.515650e-48 |
| MsG0580024309.01 | MsG0680030761.01 | 0.829168 | 5.985447e-55 | 6.077904e-52 |
| MsG0580024571.01 | MsG0680030761.01 | 0.837711 | 4.422906e-57 | 5.794401e-54 |
| MsG0580024678.01 | MsG0680030761.01 | 0.815243 | 1.021769e-51 | 7.006425e-49 |
| MsG0580024875.01 | MsG0680030761.01 | 0.859707 | 3.433269e-63 | 9.150800e-60 |
| MsG0580025355.01 | MsG0680030761.01 | 0.803289 | 3.743550e-49 | 1.873958e-46 |
| MsG0380015081.01 | MsG0680030761.01 | 0.810347 | 1.205788e-50 | 7.250844e-48 |
| MsG0380015111.01 | MsG0680030761.01 | 0.836430 | 9.400600e-57 | 1.184440e-53 |
| MsG0380015348.01 | MsG0680030761.01 | 0.826040 | 3.373505e-54 | 3.128152e-51 |
| MsG0380015439.01 | MsG0680030761.01 | 0.827819 | 1.267439e-54 | 1.237149e-51 |
| MsG0380015546.01 | MsG0680030761.01 | 0.827948 | 1.180212e-54 | 1.156441e-51 |
| MsG0380015752.01 | MsG0680030761.01 | 0.806403 | 8.368272e-50 | 4.537909e-47 |
| MsG0380015900.01 | MsG0680030761.01 | 0.821297 | 4.351800e-53 | 3.526501e-50 |
| MsG0380016241.01 | MsG0680030761.01 | 0.811257 | 7.662142e-51 | 4.720380e-48 |
| MsG0380016790.01 | MsG0680030761.01 | 0.826074 | 3.311157e-54 | 3.073143e-51 |
| MsG0380016835.01 | MsG0680030761.01 | 0.830043 | 3.667064e-55 | 3.819579e-52 |
| MsG0380016931.01 | MsG0680030761.01 | 0.810486 | 1.125372e-50 | 6.792248e-48 |
| MsG0380017141.01 | MsG0680030761.01 | 0.807837 | 4.159472e-50 | 2.340906e-47 |
| MsG0380017309.01 | MsG0680030761.01 | 0.864728 | 9.864713e-65 | 3.129166e-61 |
| MsG0380017402.01 | MsG0680030761.01 | 0.836927 | 7.023015e-57 | 8.981684e-54 |
| MsG0380017895.01 | MsG0680030761.01 | 0.839600 | 1.438307e-57 | 1.996086e-54 |
| MsG0380017962.01 | MsG0680030761.01 | 0.819240 | 1.288401e-52 | 9.860280e-50 |
| MsG0380017966.01 | MsG0680030761.01 | 0.819318 | 1.236735e-52 | 9.484409e-50 |
| MsG0380018027.01 | MsG0680030761.01 | 0.806863 | 6.689902e-50 | 3.671038e-47 |
| MsG0380018066.01 | MsG0680030761.01 | 0.819491 | 1.129279e-52 | 8.703405e-50 |
| MsG0380018072.01 | MsG0680030761.01 | 0.806033 | 1.001218e-49 | 5.378555e-47 |
| MsG0480018190.01 | MsG0680030761.01 | 0.837154 | 6.144445e-57 | 7.912042e-54 |
| MsG0580027249.01 | MsG0680030761.01 | 0.817909 | 2.582612e-52 | 1.905164e-49 |
| MsG0580027983.01 | MsG0680030761.01 | 0.859999 | 2.803176e-63 | 7.548697e-60 |
| MsG0580030197.01 | MsG0680030761.01 | 0.822131 | 2.791327e-53 | 2.315971e-50 |
| MsG0680030290.01 | MsG0680030761.01 | 0.834498 | 2.894181e-56 | 3.440929e-53 |
| MsG0680030439.01 | MsG0680030761.01 | 0.822347 | 2.487209e-53 | 2.076472e-50 |
| MsG0680030477.01 | MsG0680030761.01 | 0.821190 | 4.605471e-53 | 3.721303e-50 |
| MsG0280006805.01 | MsG0680030761.01 | 0.804480 | 2.116887e-49 | 1.092632e-46 |
| MsG0280007069.01 | MsG0680030761.01 | 0.803586 | 3.247461e-49 | 1.638245e-46 |
| MsG0280007136.01 | MsG0680030761.01 | 0.825766 | 3.918587e-54 | 3.605408e-51 |
| MsG0280007247.01 | MsG0680030761.01 | 0.829668 | 4.525538e-55 | 4.663160e-52 |
| MsG0280007322.01 | MsG0680030761.01 | 0.802636 | 5.106409e-49 | 2.514004e-46 |
| MsG0280007649.01 | MsG0680030761.01 | 0.840814 | 6.930788e-58 | 9.988701e-55 |
| MsG0280007650.01 | MsG0680030761.01 | 0.842541 | 2.428209e-58 | 3.693825e-55 |
| MsG0280007702.01 | MsG0680030761.01 | 0.814417 | 1.557393e-51 | 1.044445e-48 |
| MsG0280008379.01 | MsG0680030761.01 | 0.816966 | 4.210510e-52 | 3.027200e-49 |
| MsG0280008430.01 | MsG0680030761.01 | 0.817714 | 2.858163e-52 | 2.097236e-49 |
| MsG0280008588.01 | MsG0680030761.01 | 0.801764 | 7.719556e-49 | 3.716914e-46 |
| MsG0280008913.01 | MsG0680030761.01 | 0.803209 | 3.887712e-49 | 1.942200e-46 |
| MsG0280008935.01 | MsG0680030761.01 | 0.841083 | 5.892715e-58 | 8.562014e-55 |
| MsG0280009776.01 | MsG0680030761.01 | 0.821627 | 3.650973e-53 | 2.985982e-50 |
| MsG0280010016.01 | MsG0680030761.01 | 0.800753 | 1.243319e-48 | 5.835478e-46 |
| MsG0280010281.01 | MsG0680030761.01 | 0.875779 | 2.355109e-68 | 1.113817e-64 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680030761.01 | MsG0680030759.01 | PPI |
| MsG0680030761.01 | MsG0680030757.01 | PPI |
| MsG0680030761.01 | MsG0280010281.01 | PPI |
| MsG0680030761.01 | MsG0680030758.01 | PPI |
| MsG0680030761.01 | MsG0680030756.01 | PPI |
| MsG0480022765.01 | MsG0680030761.01 | PPI |
| MsG0680030761.01 | MsG0380013114.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030761.01.T01 | MTR_6g012080 | 96.981 | 265 | 8 | 0 | 1 | 265 | 1 | 265 | 0.0 | 526 |
| MsG0680030761.01.T01 | MTR_6g011890 | 95.472 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 0.0 | 511 |
| MsG0680030761.01.T01 | MTR_6g012110 | 95.472 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 0.0 | 504 |
| MsG0680030761.01.T01 | MTR_6g011880 | 92.453 | 265 | 20 | 0 | 1 | 265 | 1 | 265 | 6.03e-180 | 495 |
| MsG0680030761.01.T01 | MTR_6g011870 | 92.453 | 265 | 20 | 0 | 1 | 265 | 1 | 265 | 1.14e-179 | 494 |
| MsG0680030761.01.T01 | MTR_4g094605 | 89.474 | 266 | 27 | 1 | 1 | 265 | 1 | 266 | 2.34e-177 | 489 |
| MsG0680030761.01.T01 | MTR_5g097280 | 74.627 | 268 | 62 | 3 | 1 | 265 | 1 | 265 | 4.33e-147 | 412 |
| MsG0680030761.01.T01 | MTR_6g043600 | 76.981 | 265 | 25 | 3 | 1 | 265 | 1 | 229 | 7.20e-137 | 385 |
| MsG0680030761.01.T01 | MTR_2g081090 | 77.064 | 218 | 48 | 2 | 49 | 264 | 19 | 236 | 4.12e-118 | 338 |
| MsG0680030761.01.T01 | MTR_2g081090 | 77.064 | 218 | 48 | 2 | 49 | 264 | 46 | 263 | 7.10e-118 | 338 |
| MsG0680030761.01.T01 | MTR_6g060175 | 51.675 | 209 | 92 | 4 | 49 | 253 | 71 | 274 | 3.83e-63 | 200 |
| MsG0680030761.01.T01 | MTR_1g026550 | 50.926 | 216 | 95 | 6 | 49 | 253 | 107 | 322 | 1.96e-60 | 194 |
| MsG0680030761.01.T01 | MTR_6g060175 | 49.761 | 209 | 86 | 5 | 49 | 253 | 71 | 264 | 1.60e-56 | 182 |
| MsG0680030761.01.T01 | MTR_6g033320 | 44.041 | 193 | 88 | 6 | 66 | 253 | 56 | 233 | 8.28e-38 | 133 |
| MsG0680030761.01.T01 | MTR_5g098785 | 36.918 | 279 | 140 | 10 | 1 | 253 | 1 | 269 | 9.31e-38 | 134 |
| MsG0680030761.01.T01 | MTR_8g023790 | 35.907 | 259 | 118 | 11 | 9 | 249 | 28 | 256 | 1.65e-36 | 130 |
| MsG0680030761.01.T01 | MTR_5g098780 | 35.842 | 279 | 141 | 10 | 1 | 253 | 1 | 267 | 1.93e-36 | 130 |
| MsG0680030761.01.T01 | MTR_3g101670 | 37.931 | 203 | 94 | 6 | 64 | 249 | 66 | 253 | 9.13e-34 | 123 |
| MsG0680030761.01.T01 | MTR_2g042720 | 36.726 | 226 | 107 | 9 | 52 | 260 | 60 | 266 | 7.87e-32 | 118 |
| MsG0680030761.01.T01 | MTR_3g435460 | 35.025 | 197 | 104 | 5 | 65 | 252 | 62 | 243 | 1.66e-29 | 112 |
| MsG0680030761.01.T01 | MTR_4g015570 | 42.073 | 164 | 80 | 7 | 91 | 253 | 132 | 281 | 4.83e-27 | 106 |
| MsG0680030761.01.T01 | MTR_1g026550 | 46.032 | 126 | 64 | 3 | 47 | 168 | 105 | 230 | 9.87e-27 | 104 |
| MsG0680030761.01.T01 | MTR_3g435460 | 33.862 | 189 | 101 | 5 | 73 | 252 | 9 | 182 | 7.55e-26 | 100 |
| MsG0680030761.01.T01 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 7.22e-21 | 84.7 |
| MsG0680030761.01.T01 | MTR_3g070340 | 42.949 | 156 | 68 | 8 | 92 | 243 | 136 | 274 | 1.27e-20 | 89.0 |
| MsG0680030761.01.T01 | MTR_2g008610 | 33.333 | 207 | 88 | 8 | 66 | 242 | 73 | 259 | 1.01e-17 | 80.9 |
| MsG0680030761.01.T01 | MTR_2g436960 | 47.945 | 73 | 31 | 2 | 180 | 252 | 27 | 92 | 4.36e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030761.01.T01 | AT1G29930 | 87.640 | 267 | 31 | 2 | 1 | 265 | 1 | 267 | 8.49e-172 | 475 |
| MsG0680030761.01.T01 | AT1G29920 | 87.266 | 267 | 32 | 2 | 1 | 265 | 1 | 267 | 5.19e-171 | 473 |
| MsG0680030761.01.T01 | AT1G29910 | 87.266 | 267 | 32 | 2 | 1 | 265 | 1 | 267 | 5.19e-171 | 473 |
| MsG0680030761.01.T01 | AT2G34430 | 87.640 | 267 | 30 | 3 | 1 | 265 | 1 | 266 | 2.17e-169 | 469 |
| MsG0680030761.01.T01 | AT2G34420 | 87.640 | 267 | 29 | 3 | 1 | 265 | 1 | 265 | 6.93e-169 | 467 |
| MsG0680030761.01.T01 | AT2G05070 | 76.493 | 268 | 57 | 3 | 1 | 265 | 1 | 265 | 4.70e-149 | 417 |
| MsG0680030761.01.T01 | AT3G27690 | 76.015 | 271 | 54 | 4 | 2 | 265 | 32 | 298 | 1.72e-148 | 417 |
| MsG0680030761.01.T01 | AT3G27690 | 76.471 | 272 | 51 | 5 | 1 | 265 | 1 | 266 | 7.55e-148 | 414 |
| MsG0680030761.01.T01 | AT2G05100 | 76.015 | 271 | 53 | 5 | 1 | 265 | 1 | 265 | 1.13e-147 | 414 |
| MsG0680030761.01.T01 | AT2G05100 | 75.309 | 243 | 48 | 5 | 1 | 237 | 1 | 237 | 2.52e-126 | 362 |
| MsG0680030761.01.T01 | AT5G54270 | 67.790 | 267 | 70 | 7 | 10 | 264 | 2 | 264 | 1.87e-117 | 337 |
| MsG0680030761.01.T01 | AT1G76570 | 46.725 | 229 | 112 | 5 | 35 | 253 | 92 | 320 | 5.26e-61 | 196 |
| MsG0680030761.01.T01 | AT4G10340 | 49.763 | 211 | 97 | 4 | 47 | 253 | 60 | 265 | 6.90e-59 | 189 |
| MsG0680030761.01.T01 | AT3G54890 | 45.078 | 193 | 86 | 6 | 66 | 253 | 55 | 232 | 3.39e-39 | 137 |
| MsG0680030761.01.T01 | AT3G61470 | 39.535 | 215 | 94 | 9 | 52 | 249 | 50 | 245 | 2.81e-36 | 130 |
| MsG0680030761.01.T01 | AT1G61520 | 39.171 | 217 | 97 | 9 | 62 | 253 | 59 | 265 | 3.24e-36 | 130 |
| MsG0680030761.01.T01 | AT1G61520 | 39.171 | 217 | 97 | 9 | 62 | 253 | 59 | 265 | 3.24e-36 | 130 |
| MsG0680030761.01.T01 | AT1G45474 | 37.004 | 227 | 126 | 6 | 32 | 249 | 24 | 242 | 9.33e-35 | 125 |
| MsG0680030761.01.T01 | AT1G45474 | 37.004 | 227 | 126 | 6 | 32 | 249 | 24 | 242 | 9.33e-35 | 125 |
| MsG0680030761.01.T01 | AT1G61520 | 38.835 | 206 | 91 | 9 | 73 | 253 | 15 | 210 | 5.75e-33 | 120 |
| MsG0680030761.01.T01 | AT1G19150 | 36.283 | 226 | 108 | 8 | 52 | 260 | 63 | 269 | 1.57e-30 | 115 |
| MsG0680030761.01.T01 | AT3G47470 | 39.583 | 192 | 102 | 7 | 65 | 252 | 63 | 244 | 3.50e-30 | 114 |
| MsG0680030761.01.T01 | AT3G08940 | 35.385 | 260 | 106 | 12 | 39 | 253 | 37 | 279 | 6.09e-28 | 108 |
| MsG0680030761.01.T01 | AT5G01530 | 44.785 | 163 | 75 | 8 | 92 | 253 | 134 | 282 | 7.16e-28 | 108 |
| MsG0680030761.01.T01 | AT3G54890 | 42.038 | 157 | 72 | 5 | 66 | 218 | 55 | 196 | 2.84e-25 | 100 |
| MsG0680030761.01.T01 | AT3G54890 | 37.895 | 190 | 70 | 6 | 66 | 253 | 55 | 198 | 1.10e-24 | 98.2 |
| MsG0680030761.01.T01 | AT2G40100 | 40.645 | 155 | 72 | 7 | 92 | 243 | 135 | 272 | 4.05e-22 | 93.2 |
| MsG0680030761.01.T01 | AT1G15820 | 34.783 | 207 | 85 | 8 | 66 | 242 | 70 | 256 | 1.49e-18 | 82.8 |
| MsG0680030761.01.T01 | AT5G28450 | 55.556 | 63 | 26 | 2 | 189 | 249 | 99 | 161 | 1.70e-13 | 67.4 |
| MsG0680030761.01.T01 | AT3G54890 | 43.529 | 85 | 40 | 2 | 66 | 149 | 55 | 132 | 6.59e-12 | 62.8 |
Find 109 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGCATCCTTGCTATT+TGG | 0.098078 | 6:+8704399 | MsG0680030761.01.T01:CDS |
| GGCTGTCCAAGTTATCTTAA+TGG | 0.243134 | 6:+8704421 | MsG0680030761.01.T01:CDS |
| GGTGAATTTCCCGGTGATTT+TGG | 0.260735 | 6:+8704149 | MsG0680030761.01.T01:CDS |
| GCTCGCAATGGTGTGAAATT+TGG | 0.267206 | 6:+8704293 | MsG0680030761.01.T01:CDS |
| GTCCTCCGTCACTAAAGATT+TGG | 0.289012 | 6:-8704343 | None:intergenic |
| GTTCTCCAGAGGTCCCTTTC+CGG | 0.296943 | 6:-8704639 | None:intergenic |
| TCCAGAAGGAACGTTCTTCT+TGG | 0.314639 | 6:-8704054 | None:intergenic |
| TTAGCTATGTTCTCGATGTT+TGG | 0.329305 | 6:+8704593 | MsG0680030761.01.T01:CDS |
| ACAAAGCATCCTTGCTATTT+GGG | 0.338109 | 6:+8704400 | MsG0680030761.01.T01:CDS |
| TTCGTTCAGGCCATTGTAAC+CGG | 0.370708 | 6:+8704620 | MsG0680030761.01.T01:CDS |
| TACCTCACTGGTGAATTTCC+CGG | 0.380935 | 6:+8704140 | MsG0680030761.01.T01:CDS |
| CTCTCTTCTTCAACAATGGT+TGG | 0.383826 | 6:+8703960 | MsG0680030761.01.T01:CDS |
| AAGTACTTGGGTCCATTCTC+TGG | 0.385387 | 6:+8704104 | MsG0680030761.01.T01:CDS |
| GCTGTCCAAGTTATCTTAAT+GGG | 0.390364 | 6:+8704422 | MsG0680030761.01.T01:CDS |
| ATGTGTCTTCCCTGAGCTCT+TGG | 0.395854 | 6:+8704271 | MsG0680030761.01.T01:CDS |
| ATTCTTCCCATGCCAAGGTC+TGG | 0.397640 | 6:-8704011 | None:intergenic |
| ACCAAGAAGAACGTTCCTTC+TGG | 0.405063 | 6:+8704053 | MsG0680030761.01.T01:CDS |
| CAGCTCCCATTAAGATAACT+TGG | 0.409909 | 6:-8704427 | None:intergenic |
| TCCTCCGTCACTAAAGATTT+GGG | 0.411323 | 6:-8704342 | None:intergenic |
| TTCAACTCAGCAAAAGCCTC+TGG | 0.411824 | 6:-8704545 | None:intergenic |
| CCCAAGTACTTGACACGGTC+TGG | 0.412244 | 6:-8704092 | None:intergenic |
| TCCAGACCGTGTCAAGTACT+TGG | 0.414229 | 6:+8704091 | MsG0680030761.01.T01:CDS |
| TGTTGACGGGGTCAGCAATA+TGG | 0.416907 | 6:-8704670 | None:intergenic |
| AGGAGGAAGCTTTGATCCAT+TGG | 0.422685 | 6:+8704508 | MsG0680030761.01.T01:CDS |
| TGGGCTATGTTGGGTGCCTT+AGG | 0.424235 | 6:+8704248 | MsG0680030761.01.T01:CDS |
| GGCCCACGCGTTGTTGTTGA+CGG | 0.427800 | 6:-8704684 | None:intergenic |
| CTTTGTGCATGGACTAGGCT+AGG | 0.429458 | 6:-8704383 | None:intergenic |
| TGACGGAGGACTTGACTACT+TGG | 0.430522 | 6:+8704355 | MsG0680030761.01.T01:CDS |
| CGTATTGCTGGTGGACCTCT+TGG | 0.432323 | 6:+8704461 | MsG0680030761.01.T01:CDS |
| GTGGAGGGTTACCGTATTGC+TGG | 0.438239 | 6:+8704449 | MsG0680030761.01.T01:CDS |
| CCATTGCGAGCCAAGAGCTC+AGG | 0.443229 | 6:-8704281 | None:intergenic |
| TCTCTTCTTCAACAATGGTT+GGG | 0.445775 | 6:+8703961 | MsG0680030761.01.T01:CDS |
| GGAGGAAGCTTTGATCCATT+GGG | 0.451132 | 6:+8704509 | MsG0680030761.01.T01:CDS |
| GGCTCTCTCTTCTTCAACAA+TGG | 0.456801 | 6:+8703956 | MsG0680030761.01.T01:CDS |
| TGTGGATGACCTCGAGTTCA+CGG | 0.456904 | 6:-8704220 | None:intergenic |
| GGATGCTTTGTGCATGGACT+AGG | 0.457276 | 6:-8704388 | None:intergenic |
| CACAGCAGATGGGCTATGTT+GGG | 0.458091 | 6:+8704239 | MsG0680030761.01.T01:CDS |
| CCACAGCAGATGGGCTATGT+TGG | 0.462149 | 6:+8704238 | MsG0680030761.01.T01:CDS |
| GCCCACGCGTTGTTGTTGAC+GGG | 0.462935 | 6:-8704683 | None:intergenic |
| TGGCGAAGCTGTGTGGTTCA+AGG | 0.464071 | 6:+8704313 | MsG0680030761.01.T01:CDS |
| CTTTCCGGGGACAAAGTTTG+TGG | 0.467067 | 6:-8704711 | None:intergenic |
| CAGGCCATTGTAACCGGAAA+GGG | 0.483589 | 6:+8704626 | MsG0680030761.01.T01:CDS |
| AATTCACCAGTGAGGTAAGA+TGG | 0.486152 | 6:-8704134 | None:intergenic |
| TTCTTCAACAATGGTTGGGA+AGG | 0.494108 | 6:+8703965 | MsG0680030761.01.T01:CDS |
| CTCTGGGTCAGCAGAAAGCC+CGG | 0.497871 | 6:-8704183 | None:intergenic |
| AATGGATCAAAGCTTCCTCC+TGG | 0.501671 | 6:-8704506 | None:intergenic |
| CCTGAGCTCTTGGCTCGCAA+TGG | 0.515629 | 6:+8704281 | MsG0680030761.01.T01:CDS |
| AGAAGGAACGTTCTTCTTGG+TGG | 0.518277 | 6:-8704051 | None:intergenic |
| TCGAGGTCATCCACAGCAGA+TGG | 0.521084 | 6:+8704228 | MsG0680030761.01.T01:CDS |
| GATGGAGCTTCACCAGAGAA+TGG | 0.521781 | 6:-8704116 | None:intergenic |
| AAGCTTCCTCCTGGGTAAAG+TGG | 0.522451 | 6:-8704497 | None:intergenic |
| TATCTTAATGGGAGCTGTGG+AGG | 0.528220 | 6:+8704433 | MsG0680030761.01.T01:CDS |
| TTTGCCACAAACTTTGTCCC+CGG | 0.531351 | 6:+8704707 | MsG0680030761.01.T01:CDS |
| ATGCCAAGGTCTGGAGTAGA+GGG | 0.531803 | 6:-8704002 | None:intergenic |
| TGTAACCGGAAAGGGACCTC+TGG | 0.531859 | 6:+8704634 | MsG0680030761.01.T01:CDS |
| AGCTTCCTCCTGGGTAAAGT+GGG | 0.531940 | 6:-8704496 | None:intergenic |
| TGAAAGAACTAAAGAATGGT+AGG | 0.533963 | 6:+8704570 | MsG0680030761.01.T01:CDS |
| TGGTGATTCTTCCCATGCCA+AGG | 0.534305 | 6:-8704016 | None:intergenic |
| GGGGACAAAGTTTGTGGCAA+AGG | 0.536377 | 6:-8704705 | None:intergenic |
| GAAGCTGTGTGGTTCAAGGC+AGG | 0.542308 | 6:+8704317 | MsG0680030761.01.T01:CDS |
| CATGCCAAGGTCTGGAGTAG+AGG | 0.544682 | 6:-8704003 | None:intergenic |
| AGTGTCCCAACCAAAATCAC+CGG | 0.547428 | 6:-8704159 | None:intergenic |
| ATCTTAATGGGAGCTGTGGA+GGG | 0.548899 | 6:+8704434 | MsG0680030761.01.T01:CDS |
| ACCCCGTCAACAACAACGCG+TGG | 0.552211 | 6:+8704681 | MsG0680030761.01.T01:CDS |
| AAGGTGAAAGAACTAAAGAA+TGG | 0.554381 | 6:+8704566 | MsG0680030761.01.T01:CDS |
| CAAGAGGTCCACCAGCAATA+CGG | 0.554867 | 6:-8704460 | None:intergenic |
| GAAGCTCCATCTTACCTCAC+TGG | 0.557671 | 6:+8704128 | MsG0680030761.01.T01:CDS |
| ACACGGTCTGGACCGTACCA+TGG | 0.561133 | 6:-8704080 | None:intergenic |
| TTTGTGCATGGACTAGGCTA+GGG | 0.567865 | 6:-8704382 | None:intergenic |
| TCAACTCAGCAAAAGCCTCT+GGG | 0.575812 | 6:-8704544 | None:intergenic |
| AGGTCCCTTTCCGGTTACAA+TGG | 0.576373 | 6:-8704630 | None:intergenic |
| CCCACGCGTTGTTGTTGACG+GGG | 0.582793 | 6:-8704682 | None:intergenic |
| TAGCAAGGATGCTTTGTGCA+TGG | 0.585942 | 6:-8704394 | None:intergenic |
| CTCTACTCCAGACCTTGGCA+TGG | 0.586599 | 6:+8704004 | MsG0680030761.01.T01:CDS |
| CATTGCGAGCCAAGAGCTCA+GGG | 0.591519 | 6:-8704280 | None:intergenic |
| CCAGACCGTGTCAAGTACTT+GGG | 0.592167 | 6:+8704092 | MsG0680030761.01.T01:CDS |
| CGAGGTCATCCACAGCAGAT+GGG | 0.594462 | 6:+8704229 | MsG0680030761.01.T01:CDS |
| ATGGATCAAAGCTTCCTCCT+GGG | 0.595281 | 6:-8704505 | None:intergenic |
| GGGTCGTCAGAGAGGCCCAA+TGG | 0.597262 | 6:-8704524 | None:intergenic |
| AGTTATCTTAATGGGAGCTG+TGG | 0.599582 | 6:+8704430 | MsG0680030761.01.T01:CDS |
| TCAGGCCATTGTAACCGGAA+AGG | 0.602000 | 6:+8704625 | MsG0680030761.01.T01:CDS |
| CCAACATAGCCCATCTGCTG+TGG | 0.605876 | 6:-8704238 | None:intergenic |
| TCTACTCCAGACCTTGGCAT+GGG | 0.609820 | 6:+8704005 | MsG0680030761.01.T01:CDS |
| CTTGGACAGCCCAAATAGCA+AGG | 0.610157 | 6:-8704409 | None:intergenic |
| CTCAGGGAAGACACATCCTA+AGG | 0.610696 | 6:-8704264 | None:intergenic |
| TGCTGGTGGACCTCTTGGTG+AGG | 0.612383 | 6:+8704466 | MsG0680030761.01.T01:CDS |
| GCCAAGGTCTGGAGTAGAGG+GGG | 0.615542 | 6:-8704000 | None:intergenic |
| CCTTCTGGAAGTCCATGGTA+CGG | 0.618330 | 6:+8704068 | MsG0680030761.01.T01:CDS |
| AAGCCTCTGGGTCGTCAGAG+AGG | 0.618903 | 6:-8704532 | None:intergenic |
| GTGTCCCAACCAAAATCACC+GGG | 0.622027 | 6:-8704158 | None:intergenic |
| ACGTTCCTTCTGGAAGTCCA+TGG | 0.623865 | 6:+8704063 | MsG0680030761.01.T01:CDS |
| GGATCCCAAATCTTTAGTGA+CGG | 0.639909 | 6:+8704338 | MsG0680030761.01.T01:CDS |
| CCCCGTCAACAACAACGCGT+GGG | 0.640439 | 6:+8704682 | MsG0680030761.01.T01:CDS |
| TGAAATTTGGCGAAGCTGTG+TGG | 0.640456 | 6:+8704306 | MsG0680030761.01.T01:CDS |
| GGTCAGCAATATGGTCAGCA+AGG | 0.646252 | 6:-8704661 | None:intergenic |
| GAGGGTTACCGTATTGCTGG+TGG | 0.648889 | 6:+8704452 | MsG0680030761.01.T01:CDS |
| TCCCAAATCTTTAGTGACGG+AGG | 0.652925 | 6:+8704341 | MsG0680030761.01.T01:CDS |
| TAGAATGGCTACATCAACAA+TGG | 0.654071 | 6:+8703935 | None:intergenic |
| CCGTACCATGGACTTCCAGA+AGG | 0.658025 | 6:-8704068 | None:intergenic |
| GACGGAGGACTTGACTACTT+GGG | 0.666450 | 6:+8704356 | MsG0680030761.01.T01:CDS |
| GGGCCTCTCTGACGACCCAG+AGG | 0.671120 | 6:+8704529 | MsG0680030761.01.T01:CDS |
| GGGTCGACTACCTCACCAAG+AGG | 0.687407 | 6:-8704476 | None:intergenic |
| GTAGTCGACCCACTTTACCC+AGG | 0.687871 | 6:+8704488 | MsG0680030761.01.T01:CDS |
| TGCCAAGGTCTGGAGTAGAG+GGG | 0.699010 | 6:-8704001 | None:intergenic |
| TGGTCAGCAAGGTTCTCCAG+AGG | 0.701983 | 6:-8704650 | None:intergenic |
| GTCGACCCACTTTACCCAGG+AGG | 0.705815 | 6:+8704491 | MsG0680030761.01.T01:CDS |
| CACCGGGAAATTCACCAGTG+AGG | 0.708130 | 6:-8704142 | None:intergenic |
| ATGGACCCAAGTACTTGACA+CGG | 0.711188 | 6:-8704097 | None:intergenic |
| GCATGGGAAGAATCACCATG+AGG | 0.752016 | 6:+8704021 | MsG0680030761.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGGTGAAAGAACTAAAGAA+TGG | + | Chr6:8704566-8704585 | MsG0680030761.01.T01:CDS | 30.0% | |
| TGAAAGAACTAAAGAATGGT+AGG | + | Chr6:8704570-8704589 | MsG0680030761.01.T01:CDS | 30.0% | |
| GCTGTCCAAGTTATCTTAAT+GGG | + | Chr6:8704422-8704441 | MsG0680030761.01.T01:CDS | 35.0% | |
| TCTCTTCTTCAACAATGGTT+GGG | + | Chr6:8703961-8703980 | MsG0680030761.01.T01:CDS | 35.0% | |
| TTAGCTATGTTCTCGATGTT+TGG | + | Chr6:8704593-8704612 | MsG0680030761.01.T01:CDS | 35.0% | |
| ! | GATGTTTGGATTTTTCGTTC+AGG | + | Chr6:8704607-8704626 | MsG0680030761.01.T01:CDS | 35.0% |
| !! | ACAAAGCATCCTTGCTATTT+GGG | + | Chr6:8704400-8704419 | MsG0680030761.01.T01:CDS | 35.0% |
| !! | GGTTTTTGGAAAATGTCTCT+GGG | - | Chr6:8704202-8704221 | None:intergenic | 35.0% |
| AATTCACCAGTGAGGTAAGA+TGG | - | Chr6:8704137-8704156 | None:intergenic | 40.0% | |
| AGTTATCTTAATGGGAGCTG+TGG | + | Chr6:8704430-8704449 | MsG0680030761.01.T01:CDS | 40.0% | |
| CAGCTCCCATTAAGATAACT+TGG | - | Chr6:8704430-8704449 | None:intergenic | 40.0% | |
| CTCTCTTCTTCAACAATGGT+TGG | + | Chr6:8703960-8703979 | MsG0680030761.01.T01:CDS | 40.0% | |
| GGATCCCAAATCTTTAGTGA+CGG | + | Chr6:8704338-8704357 | MsG0680030761.01.T01:CDS | 40.0% | |
| GGCTGTCCAAGTTATCTTAA+TGG | + | Chr6:8704421-8704440 | MsG0680030761.01.T01:CDS | 40.0% | |
| TCCTCCGTCACTAAAGATTT+GGG | - | Chr6:8704345-8704364 | None:intergenic | 40.0% | |
| TTCTTCAACAATGGTTGGGA+AGG | + | Chr6:8703965-8703984 | MsG0680030761.01.T01:CDS | 40.0% | |
| !! | AATTTCCCGGTGATTTTGGT+TGG | + | Chr6:8704153-8704172 | MsG0680030761.01.T01:CDS | 40.0% |
| !! | CACAAAGCATCCTTGCTATT+TGG | + | Chr6:8704399-8704418 | MsG0680030761.01.T01:CDS | 40.0% |
| !! | CGGTTTTTGGAAAATGTCTC+TGG | - | Chr6:8704203-8704222 | None:intergenic | 40.0% |
| !!! | ATTTCCCGGTGATTTTGGTT+GGG | + | Chr6:8704154-8704173 | MsG0680030761.01.T01:CDS | 40.0% |
| AAGTACTTGGGTCCATTCTC+TGG | + | Chr6:8704104-8704123 | MsG0680030761.01.T01:CDS | 45.0% | |
| AATGGATCAAAGCTTCCTCC+TGG | - | Chr6:8704509-8704528 | None:intergenic | 45.0% | |
| ACCAAGAAGAACGTTCCTTC+TGG | + | Chr6:8704053-8704072 | MsG0680030761.01.T01:CDS | 45.0% | |
| AGAAGGAACGTTCTTCTTGG+TGG | - | Chr6:8704054-8704073 | None:intergenic | 45.0% | |
| AGTGTCCCAACCAAAATCAC+CGG | - | Chr6:8704162-8704181 | None:intergenic | 45.0% | |
| ATCTTAATGGGAGCTGTGGA+GGG | + | Chr6:8704434-8704453 | MsG0680030761.01.T01:CDS | 45.0% | |
| ATGGACCCAAGTACTTGACA+CGG | - | Chr6:8704100-8704119 | None:intergenic | 45.0% | |
| ATGGATCAAAGCTTCCTCCT+GGG | - | Chr6:8704508-8704527 | None:intergenic | 45.0% | |
| GCTCGCAATGGTGTGAAATT+TGG | + | Chr6:8704293-8704312 | MsG0680030761.01.T01:CDS | 45.0% | |
| GGCTCTCTCTTCTTCAACAA+TGG | + | Chr6:8703956-8703975 | MsG0680030761.01.T01:CDS | 45.0% | |
| GTCCTCCGTCACTAAAGATT+TGG | - | Chr6:8704346-8704365 | None:intergenic | 45.0% | |
| TACCTCACTGGTGAATTTCC+CGG | + | Chr6:8704140-8704159 | MsG0680030761.01.T01:CDS | 45.0% | |
| TAGCAAGGATGCTTTGTGCA+TGG | - | Chr6:8704397-8704416 | None:intergenic | 45.0% | |
| TATCTTAATGGGAGCTGTGG+AGG | + | Chr6:8704433-8704452 | MsG0680030761.01.T01:CDS | 45.0% | |
| TCAACTCAGCAAAAGCCTCT+GGG | - | Chr6:8704547-8704566 | None:intergenic | 45.0% | |
| TCCAGAAGGAACGTTCTTCT+TGG | - | Chr6:8704057-8704076 | None:intergenic | 45.0% | |
| TCCCAAATCTTTAGTGACGG+AGG | + | Chr6:8704341-8704360 | MsG0680030761.01.T01:CDS | 45.0% | |
| TGAAATTTGGCGAAGCTGTG+TGG | + | Chr6:8704306-8704325 | MsG0680030761.01.T01:CDS | 45.0% | |
| TTCAACTCAGCAAAAGCCTC+TGG | - | Chr6:8704548-8704567 | None:intergenic | 45.0% | |
| TTCCAAAAACCGTGAACTCG+AGG | + | Chr6:8704211-8704230 | MsG0680030761.01.T01:CDS | 45.0% | |
| TTCGTTCAGGCCATTGTAAC+CGG | + | Chr6:8704620-8704639 | MsG0680030761.01.T01:CDS | 45.0% | |
| TTTGCCACAAACTTTGTCCC+CGG | + | Chr6:8704707-8704726 | MsG0680030761.01.T01:CDS | 45.0% | |
| ! | AGGAGGAAGCTTTGATCCAT+TGG | + | Chr6:8704508-8704527 | MsG0680030761.01.T01:CDS | 45.0% |
| ! | GGAGGAAGCTTTGATCCATT+GGG | + | Chr6:8704509-8704528 | MsG0680030761.01.T01:CDS | 45.0% |
| ! | GGTGAATTTCCCGGTGATTT+TGG | + | Chr6:8704149-8704168 | MsG0680030761.01.T01:CDS | 45.0% |
| !! | AGAGGCTTTTGCTGAGTTGA+AGG | + | Chr6:8704547-8704566 | MsG0680030761.01.T01:CDS | 45.0% |
| !! | CTTGGTGGTTGTTTTCCTCA+TGG | - | Chr6:8704039-8704058 | None:intergenic | 45.0% |
| !! | TTTGTGCATGGACTAGGCTA+GGG | - | Chr6:8704385-8704404 | None:intergenic | 45.0% |
| AAGCTTCCTCCTGGGTAAAG+TGG | - | Chr6:8704500-8704519 | None:intergenic | 50.0% | |
| AGCTTCCTCCTGGGTAAAGT+GGG | - | Chr6:8704499-8704518 | None:intergenic | 50.0% | |
| AGGTCCCTTTCCGGTTACAA+TGG | - | Chr6:8704633-8704652 | None:intergenic | 50.0% | |
| ATGTGTCTTCCCTGAGCTCT+TGG | + | Chr6:8704271-8704290 | MsG0680030761.01.T01:CDS | 50.0% | |
| ATTCTTCCCATGCCAAGGTC+TGG | - | Chr6:8704014-8704033 | None:intergenic | 50.0% | |
| CAAGAGGTCCACCAGCAATA+CGG | - | Chr6:8704463-8704482 | None:intergenic | 50.0% | |
| CAGGCCATTGTAACCGGAAA+GGG | + | Chr6:8704626-8704645 | MsG0680030761.01.T01:CDS | 50.0% | |
| CCAGACCGTGTCAAGTACTT+GGG | + | Chr6:8704092-8704111 | MsG0680030761.01.T01:CDS | 50.0% | |
| CTCAGGGAAGACACATCCTA+AGG | - | Chr6:8704267-8704286 | None:intergenic | 50.0% | |
| CTTGGACAGCCCAAATAGCA+AGG | - | Chr6:8704412-8704431 | None:intergenic | 50.0% | |
| CTTTCCGGGGACAAAGTTTG+TGG | - | Chr6:8704714-8704733 | None:intergenic | 50.0% | |
| GAAGCTCCATCTTACCTCAC+TGG | + | Chr6:8704128-8704147 | MsG0680030761.01.T01:CDS | 50.0% | |
| GACGGAGGACTTGACTACTT+GGG | + | Chr6:8704356-8704375 | MsG0680030761.01.T01:CDS | 50.0% | |
| GATGGAGCTTCACCAGAGAA+TGG | - | Chr6:8704119-8704138 | None:intergenic | 50.0% | |
| GCATGGGAAGAATCACCATG+AGG | + | Chr6:8704021-8704040 | MsG0680030761.01.T01:CDS | 50.0% | |
| GGATGCTTTGTGCATGGACT+AGG | - | Chr6:8704391-8704410 | None:intergenic | 50.0% | |
| GGGGACAAAGTTTGTGGCAA+AGG | - | Chr6:8704708-8704727 | None:intergenic | 50.0% | |
| GGTCAGCAATATGGTCAGCA+AGG | - | Chr6:8704664-8704683 | None:intergenic | 50.0% | |
| GTGTCCCAACCAAAATCACC+GGG | - | Chr6:8704161-8704180 | None:intergenic | 50.0% | |
| TCAGGCCATTGTAACCGGAA+AGG | + | Chr6:8704625-8704644 | MsG0680030761.01.T01:CDS | 50.0% | |
| TCCAGACCGTGTCAAGTACT+TGG | + | Chr6:8704091-8704110 | MsG0680030761.01.T01:CDS | 50.0% | |
| TCTACTCCAGACCTTGGCAT+GGG | + | Chr6:8704005-8704024 | MsG0680030761.01.T01:CDS | 50.0% | |
| TGACGGAGGACTTGACTACT+TGG | + | Chr6:8704355-8704374 | MsG0680030761.01.T01:CDS | 50.0% | |
| TGGTGATTCTTCCCATGCCA+AGG | - | Chr6:8704019-8704038 | None:intergenic | 50.0% | |
| TGTGGATGACCTCGAGTTCA+CGG | - | Chr6:8704223-8704242 | None:intergenic | 50.0% | |
| TGTTGACGGGGTCAGCAATA+TGG | - | Chr6:8704673-8704692 | None:intergenic | 50.0% | |
| ! | ACGTTCCTTCTGGAAGTCCA+TGG | + | Chr6:8704063-8704082 | MsG0680030761.01.T01:CDS | 50.0% |
| ! | ATGCCAAGGTCTGGAGTAGA+GGG | - | Chr6:8704005-8704024 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGTCCATGGTA+CGG | + | Chr6:8704068-8704087 | MsG0680030761.01.T01:CDS | 50.0% |
| ! | GACCTCGAGTTCACGGTTTT+TGG | - | Chr6:8704216-8704235 | None:intergenic | 50.0% |
| !! | CACAGCAGATGGGCTATGTT+GGG | + | Chr6:8704239-8704258 | MsG0680030761.01.T01:CDS | 50.0% |
| !! | CTTTGTGCATGGACTAGGCT+AGG | - | Chr6:8704386-8704405 | None:intergenic | 50.0% |
| !!! | ATTTTGGTTGGGACACTGCC+GGG | + | Chr6:8704165-8704184 | MsG0680030761.01.T01:CDS | 50.0% |
| !!! | GATTTTGGTTGGGACACTGC+CGG | + | Chr6:8704164-8704183 | MsG0680030761.01.T01:CDS | 50.0% |
| CACCGGGAAATTCACCAGTG+AGG | - | Chr6:8704145-8704164 | None:intergenic | 55.0% | |
| CATTGCGAGCCAAGAGCTCA+GGG | - | Chr6:8704283-8704302 | None:intergenic | 55.0% | |
| CCAACATAGCCCATCTGCTG+TGG | - | Chr6:8704241-8704260 | None:intergenic | 55.0% | |
| CCCAAGTACTTGACACGGTC+TGG | - | Chr6:8704095-8704114 | None:intergenic | 55.0% | |
| CCGTACCATGGACTTCCAGA+AGG | - | Chr6:8704071-8704090 | None:intergenic | 55.0% | |
| CGAGGTCATCCACAGCAGAT+GGG | + | Chr6:8704229-8704248 | MsG0680030761.01.T01:CDS | 55.0% | |
| CTCTACTCCAGACCTTGGCA+TGG | + | Chr6:8704004-8704023 | MsG0680030761.01.T01:CDS | 55.0% | |
| GAAGCTGTGTGGTTCAAGGC+AGG | + | Chr6:8704317-8704336 | MsG0680030761.01.T01:CDS | 55.0% | |
| GAGGGTTACCGTATTGCTGG+TGG | + | Chr6:8704452-8704471 | MsG0680030761.01.T01:CDS | 55.0% | |
| GTAGTCGACCCACTTTACCC+AGG | + | Chr6:8704488-8704507 | MsG0680030761.01.T01:CDS | 55.0% | |
| GTGGAGGGTTACCGTATTGC+TGG | + | Chr6:8704449-8704468 | MsG0680030761.01.T01:CDS | 55.0% | |
| GTTCTCCAGAGGTCCCTTTC+CGG | - | Chr6:8704642-8704661 | None:intergenic | 55.0% | |
| TCGAGGTCATCCACAGCAGA+TGG | + | Chr6:8704228-8704247 | MsG0680030761.01.T01:CDS | 55.0% | |
| TGGCGAAGCTGTGTGGTTCA+AGG | + | Chr6:8704313-8704332 | MsG0680030761.01.T01:CDS | 55.0% | |
| TGGGCTATGTTGGGTGCCTT+AGG | + | Chr6:8704248-8704267 | MsG0680030761.01.T01:CDS | 55.0% | |
| TGGTCAGCAAGGTTCTCCAG+AGG | - | Chr6:8704653-8704672 | None:intergenic | 55.0% | |
| TGTAACCGGAAAGGGACCTC+TGG | + | Chr6:8704634-8704653 | MsG0680030761.01.T01:CDS | 55.0% | |
| ! | CATGCCAAGGTCTGGAGTAG+AGG | - | Chr6:8704006-8704025 | None:intergenic | 55.0% |
| ! | CGTATTGCTGGTGGACCTCT+TGG | + | Chr6:8704461-8704480 | MsG0680030761.01.T01:CDS | 55.0% |
| ! | TGCCAAGGTCTGGAGTAGAG+GGG | - | Chr6:8704004-8704023 | None:intergenic | 55.0% |
| !! | CCACAGCAGATGGGCTATGT+TGG | + | Chr6:8704238-8704257 | MsG0680030761.01.T01:CDS | 55.0% |
| AAGCCTCTGGGTCGTCAGAG+AGG | - | Chr6:8704535-8704554 | None:intergenic | 60.0% | |
| ACACGGTCTGGACCGTACCA+TGG | - | Chr6:8704083-8704102 | None:intergenic | 60.0% | |
| ACCCCGTCAACAACAACGCG+TGG | + | Chr6:8704681-8704700 | MsG0680030761.01.T01:CDS | 60.0% | |
| CCATTGCGAGCCAAGAGCTC+AGG | - | Chr6:8704284-8704303 | None:intergenic | 60.0% | |
| CCCCGTCAACAACAACGCGT+GGG | + | Chr6:8704682-8704701 | MsG0680030761.01.T01:CDS | 60.0% | |
| CTCTGGGTCAGCAGAAAGCC+CGG | - | Chr6:8704186-8704205 | None:intergenic | 60.0% | |
| GGGTCGACTACCTCACCAAG+AGG | - | Chr6:8704479-8704498 | None:intergenic | 60.0% | |
| GTCGACCCACTTTACCCAGG+AGG | + | Chr6:8704491-8704510 | MsG0680030761.01.T01:CDS | 60.0% | |
| TCCCCCTCTACTCCAGACCT+TGG | + | Chr6:8703999-8704018 | MsG0680030761.01.T01:CDS | 60.0% | |
| ! | CCCACGCGTTGTTGTTGACG+GGG | - | Chr6:8704685-8704704 | None:intergenic | 60.0% |
| ! | CCTGAGCTCTTGGCTCGCAA+TGG | + | Chr6:8704281-8704300 | MsG0680030761.01.T01:CDS | 60.0% |
| ! | GCCAAGGTCTGGAGTAGAGG+GGG | - | Chr6:8704003-8704022 | None:intergenic | 60.0% |
| ! | GCCCACGCGTTGTTGTTGAC+GGG | - | Chr6:8704686-8704705 | None:intergenic | 60.0% |
| ! | GGCCCACGCGTTGTTGTTGA+CGG | - | Chr6:8704687-8704706 | None:intergenic | 60.0% |
| ! | TGCTGGTGGACCTCTTGGTG+AGG | + | Chr6:8704466-8704485 | MsG0680030761.01.T01:CDS | 60.0% |
| GGGTCGTCAGAGAGGCCCAA+TGG | - | Chr6:8704527-8704546 | None:intergenic | 65.0% | |
| GGGCCTCTCTGACGACCCAG+AGG | + | Chr6:8704529-8704548 | MsG0680030761.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 8703939 | 8704736 | 8703939 | ID=MsG0680030761.01;Name=MsG0680030761.01 |
| Chr6 | mRNA | 8703939 | 8704736 | 8703939 | ID=MsG0680030761.01.T01;Parent=MsG0680030761.01;Name=MsG0680030761.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|265 |
| Chr6 | exon | 8703939 | 8704736 | 8703939 | ID=MsG0680030761.01.T01:exon:7213;Parent=MsG0680030761.01.T01 |
| Chr6 | CDS | 8703939 | 8704736 | 8703939 | ID=MsG0680030761.01.T01:cds;Parent=MsG0680030761.01.T01 |
| Gene Sequence |
| Protein sequence |
