Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320270 | KYP58465.1 | 100.000 | 136 | 0 | 0 | 1 | 136 | 5 | 140 | 1.76e-92 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320270 | sp|P68428|H32_WHEAT | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 5.15e-95 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030070 | Msa0320270 | 0.871784 | 5.249508e-67 | -8.615850e-47 |
| Msa0030690 | Msa0320270 | 0.803316 | 3.694211e-49 | -8.615850e-47 |
| Msa0050530 | Msa0320270 | 0.811071 | 8.410070e-51 | -8.615850e-47 |
| Msa0067380 | Msa0320270 | 0.808484 | 3.028071e-50 | -8.615850e-47 |
| Msa0090440 | Msa0320270 | 0.814796 | 1.283930e-51 | -8.615850e-47 |
| Msa0091350 | Msa0320270 | 0.823226 | 1.552441e-53 | -8.615850e-47 |
| Msa0100600 | Msa0320270 | 0.812318 | 4.503605e-51 | -8.615850e-47 |
| Msa0100890 | Msa0320270 | 0.802568 | 5.275509e-49 | -8.615850e-47 |
| Msa0113410 | Msa0320270 | 0.821240 | 4.486331e-53 | -8.615850e-47 |
| Msa0125590 | Msa0320270 | 0.862783 | 3.966885e-64 | -8.615850e-47 |
| Msa0127270 | Msa0320270 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0127340 | Msa0320270 | 0.830121 | 3.509039e-55 | -8.615850e-47 |
| Msa0158900 | Msa0320270 | 0.804118 | 2.519000e-49 | -8.615850e-47 |
| Msa0165830 | Msa0320270 | 0.800370 | 1.487814e-48 | -8.615850e-47 |
| Msa0170070 | Msa0320270 | 0.857189 | 1.933690e-62 | -8.615850e-47 |
| Msa0186180 | Msa0320270 | 0.846888 | 1.636868e-59 | -8.615850e-47 |
| Msa0204970 | Msa0320270 | 0.838632 | 2.562990e-57 | -8.615850e-47 |
| Msa0225800 | Msa0320270 | 0.801985 | 6.954301e-49 | -8.615850e-47 |
| Msa0249870 | Msa0320270 | 0.834189 | 3.460964e-56 | -8.615850e-47 |
| Msa0260630 | Msa0320270 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0281540 | Msa0320270 | 0.823553 | 1.301730e-53 | -8.615850e-47 |
| Msa0320250 | Msa0320270 | 0.999351 | 3.917050e-305 | -8.615850e-47 |
| Msa0320270 | Msa0320290 | 0.996447 | 1.203613e-227 | -8.615850e-47 |
| Msa0320270 | Msa0320580 | 0.836153 | 1.105895e-56 | -8.615850e-47 |
| Msa0320270 | Msa0344110 | 0.837638 | 4.618336e-57 | -8.615850e-47 |
| Msa0320270 | Msa0364680 | 0.802060 | 6.710845e-49 | -8.615850e-47 |
| Msa0320270 | Msa0373170 | 0.847435 | 1.158292e-59 | -8.615850e-47 |
| Msa0320270 | Msa0382230 | 0.815246 | 1.019895e-51 | -8.615850e-47 |
| Msa0320270 | Msa0383940 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
| Msa0320270 | Msa0412130 | 0.836760 | 7.746292e-57 | -8.615850e-47 |
| Msa0320270 | Msa0415820 | 0.830540 | 2.772239e-55 | -8.615850e-47 |
| Msa0320270 | Msa0416210 | 0.801987 | 6.945977e-49 | -8.615850e-47 |
| Msa0320270 | Msa0420670 | 0.809200 | 2.128140e-50 | -8.615850e-47 |
| Msa0320270 | Msa0421130 | 0.801384 | 9.235540e-49 | -8.615850e-47 |
| Msa0320270 | Msa0421750 | 0.834065 | 3.718545e-56 | -8.615850e-47 |
| Msa0320270 | Msa0433760 | 0.845022 | 5.261643e-59 | -8.615850e-47 |
| Msa0320270 | Msa0434360 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa0320270 | Msa0456670 | 0.832358 | 9.891923e-56 | -8.615850e-47 |
| Msa0320270 | Msa0461550 | 0.815534 | 8.799349e-52 | -8.615850e-47 |
| Msa0320270 | Msa0466520 | 0.813853 | 2.074339e-51 | -8.615850e-47 |
| Msa0320270 | Msa0467690 | 0.843954 | 1.019541e-58 | -8.615850e-47 |
| Msa0320270 | Msa0477630 | 0.831108 | 2.011631e-55 | -8.615850e-47 |
| Msa0320270 | Msa0478140 | 0.831719 | 1.423647e-55 | -8.615850e-47 |
| Msa0320270 | Msa0478200 | 0.828802 | 7.343164e-55 | -8.615850e-47 |
| Msa0320270 | Msa0503990 | 0.847964 | 8.284148e-60 | -8.615850e-47 |
| Msa0320270 | Msa0506540 | 0.816560 | 5.192098e-52 | -8.615850e-47 |
| Msa0320270 | Msa0506880 | 0.841921 | 3.542562e-58 | -8.615850e-47 |
| Msa0320270 | Msa0507020 | 0.802580 | 5.245674e-49 | -8.615850e-47 |
| Msa0320270 | Msa0507810 | 0.854406 | 1.257116e-61 | -8.615850e-47 |
| Msa0320270 | Msa0507820 | 0.825878 | 3.685554e-54 | -8.615850e-47 |
| Msa0320270 | Msa0507920 | 0.852625 | 4.081999e-61 | -8.615850e-47 |
| Msa0320270 | Msa0512530 | 0.809949 | 1.469394e-50 | -8.615850e-47 |
| Msa0320270 | Msa0513080 | 0.803152 | 3.995757e-49 | -8.615850e-47 |
| Msa0320270 | Msa0514020 | 0.839753 | 1.311857e-57 | -8.615850e-47 |
| Msa0320270 | Msa0520680 | 0.816176 | 6.329582e-52 | -8.615850e-47 |
| Msa0320270 | Msa0521680 | 0.830173 | 3.409590e-55 | -8.615850e-47 |
| Msa0320270 | Msa0523380 | 0.800070 | 1.712683e-48 | -8.615850e-47 |
| Msa0320270 | Msa0527850 | 0.835897 | 1.284307e-56 | -8.615850e-47 |
| Msa0320270 | Msa0541740 | 0.831842 | 1.327106e-55 | -8.615850e-47 |
| Msa0320270 | Msa0544410 | 0.847066 | 1.463037e-59 | -8.615850e-47 |
| Msa0320270 | Msa0548000 | 0.863671 | 2.107177e-64 | -8.615850e-47 |
| Msa0320270 | Msa0550590 | 0.810924 | 9.049406e-51 | -8.615850e-47 |
| Msa0320270 | Msa0554300 | 0.843600 | 1.267893e-58 | -8.615850e-47 |
| Msa0320270 | Msa0561560 | 0.815789 | 7.722729e-52 | -8.615850e-47 |
| Msa0320270 | Msa0572830 | 0.822885 | 1.864511e-53 | -8.615850e-47 |
| Msa0320270 | Msa0575710 | 0.807939 | 3.956290e-50 | -8.615850e-47 |
| Msa0320270 | Msa0582460 | 0.832158 | 1.108953e-55 | -8.615850e-47 |
| Msa0320270 | Msa0584530 | 0.817776 | 2.766623e-52 | -8.615850e-47 |
| Msa0320270 | Msa0586200 | 0.839172 | 1.857770e-57 | -8.615850e-47 |
| Msa0320270 | Msa0603410 | 0.824108 | 9.649582e-54 | -8.615850e-47 |
| Msa0320270 | Msa0608350 | 0.805892 | 1.071911e-49 | -8.615850e-47 |
| Msa0320270 | Msa0612410 | 0.818194 | 2.226392e-52 | -8.615850e-47 |
| Msa0320270 | Msa0620500 | 0.820169 | 7.905472e-53 | -8.615850e-47 |
| Msa0320270 | Msa0625620 | 0.836126 | 1.123244e-56 | -8.615850e-47 |
| Msa0320270 | Msa0640800 | 0.856179 | 3.831912e-62 | -8.615850e-47 |
| Msa0320270 | Msa0645340 | 0.833493 | 5.166353e-56 | -8.615850e-47 |
| Msa0320270 | Msa0647440 | 0.825904 | 3.634193e-54 | -8.615850e-47 |
| Msa0320270 | Msa0648760 | 0.845750 | 3.343297e-59 | -8.615850e-47 |
| Msa0320270 | Msa0653160 | 0.824898 | 6.289928e-54 | -8.615850e-47 |
| Msa0320270 | Msa0657210 | 0.809526 | 1.811765e-50 | -8.615850e-47 |
| Msa0320270 | Msa0659200 | 0.860109 | 2.597857e-63 | -8.615850e-47 |
| Msa0320270 | Msa0664070 | 0.805931 | 1.051963e-49 | -8.615850e-47 |
| Msa0320270 | Msa0684750 | 0.803850 | 2.863231e-49 | -8.615850e-47 |
| Msa0320270 | Msa0688620 | 0.846277 | 2.402942e-59 | -8.615850e-47 |
| Msa0320270 | Msa0690320 | 0.837383 | 5.370793e-57 | -8.615850e-47 |
| Msa0320270 | Msa0691270 | 0.816006 | 6.905451e-52 | -8.615850e-47 |
| Msa0320270 | Msa0701250 | 0.829111 | 6.180684e-55 | -8.615850e-47 |
| Msa0320270 | Msa0705180 | 0.861502 | 9.808505e-64 | -8.615850e-47 |
| Msa0320270 | Msa0717900 | 0.831424 | 1.682239e-55 | -8.615850e-47 |
| Msa0320270 | Msa0718040 | 0.816161 | 6.378376e-52 | -8.615850e-47 |
| Msa0320270 | Msa0720280 | 0.877556 | 5.716703e-69 | -8.615850e-47 |
| Msa0320270 | Msa0737130 | 0.806615 | 7.549064e-50 | -8.615850e-47 |
| Msa0320270 | Msa0737140 | 0.827256 | 1.730072e-54 | -8.615850e-47 |
| Msa0320270 | Msa0749190 | 0.841222 | 5.415429e-58 | -8.615850e-47 |
| Msa0320270 | Msa0750520 | 0.848848 | 4.718888e-60 | -8.615850e-47 |
| Msa0320270 | Msa0778600 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0320270 | Msa0803140 | 0.880696 | 4.437964e-70 | -8.615850e-47 |
| Msa0320270 | Msa0816080 | 0.823598 | 1.270706e-53 | -8.615850e-47 |
| Msa0320270 | Msa0816230 | 0.816769 | 4.661039e-52 | -8.615850e-47 |
| Msa0320270 | Msa0837680 | 0.803830 | 2.890543e-49 | -8.615850e-47 |
| Msa0320270 | Msa0841500 | 0.894878 | 1.629589e-75 | -8.615850e-47 |
| Msa0320270 | Msa0856610 | 0.817738 | 2.822479e-52 | -8.615850e-47 |
| Msa0320270 | Msa0900090 | 0.818083 | 2.358932e-52 | -8.615850e-47 |
| Msa0320270 | Msa0909760 | 0.831130 | 1.987716e-55 | -8.615850e-47 |
| Msa0320270 | Msa0929900 | 0.806966 | 6.362699e-50 | -8.615850e-47 |
| Msa0320270 | Msa0965470 | 0.814789 | 1.287975e-51 | -8.615850e-47 |
| Msa0320270 | Msa1008670 | 0.843985 | 1.000260e-58 | -8.615850e-47 |
| Msa0320270 | Msa1018960 | 0.849471 | 3.165895e-60 | -8.615850e-47 |
| Msa0320270 | Msa1033920 | 0.819311 | 1.241536e-52 | -8.615850e-47 |
| Msa0320270 | Msa1039380 | 0.830888 | 2.278963e-55 | -8.615850e-47 |
| Msa0320270 | Msa1060900 | 0.809643 | 1.709453e-50 | -8.615850e-47 |
| Msa0320270 | Msa1071410 | 0.846850 | 1.676025e-59 | -8.615850e-47 |
| Msa0320270 | Msa1078860 | 0.805641 | 1.210324e-49 | -8.615850e-47 |
| Msa0320270 | Msa1078990 | 0.805147 | 1.536038e-49 | -8.615850e-47 |
| Msa0320270 | Msa1082380 | 0.818604 | 1.797779e-52 | -8.615850e-47 |
| Msa0320270 | Msa1106220 | 0.807090 | 5.990870e-50 | -8.615850e-47 |
| Msa0320270 | Msa1126620 | 0.810307 | 1.230350e-50 | -8.615850e-47 |
| Msa0320270 | Msa1144990 | 0.834003 | 3.852490e-56 | -8.615850e-47 |
| Msa0320270 | Msa1147560 | 0.865453 | 5.839310e-65 | -8.615850e-47 |
| Msa0320270 | Msa1162880 | 0.847004 | 1.521314e-59 | -8.615850e-47 |
| Msa0320270 | Msa1165480 | 0.800135 | 1.660901e-48 | -8.615850e-47 |
| Msa0320270 | Msa1169170 | 0.814185 | 1.752375e-51 | -8.615850e-47 |
| Msa0320270 | Msa1191000 | 0.830917 | 2.241139e-55 | -8.615850e-47 |
| Msa0320270 | Msa1215980 | 0.821269 | 4.417461e-53 | -8.615850e-47 |
| Msa0320270 | Msa1231780 | 0.815788 | 7.724804e-52 | -8.615850e-47 |
| Msa0320270 | Msa1254420 | 0.809407 | 1.921589e-50 | -8.615850e-47 |
| Msa0320270 | Msa1267930 | 0.829006 | 6.552437e-55 | -8.615850e-47 |
| Msa0320270 | Msa1294790 | 0.810995 | 8.735715e-51 | -8.615850e-47 |
| Msa0320270 | Msa1339230 | 0.887660 | 1.174029e-72 | -8.615850e-47 |
| Msa0320270 | Msa1361930 | 0.823353 | 1.450237e-53 | -8.615850e-47 |
| Msa0320270 | Msa1381470 | 0.822314 | 2.531753e-53 | -8.615850e-47 |
| Msa0320270 | Msa1381800 | 0.846982 | 1.541994e-59 | -8.615850e-47 |
| Msa0320270 | Msa1387500 | 0.843380 | 1.452092e-58 | -8.615850e-47 |
| Msa0320270 | Msa1390210 | 0.814480 | 1.508304e-51 | -8.615850e-47 |
| Msa0320270 | Msa1393560 | 0.802421 | 5.654579e-49 | -8.615850e-47 |
| Msa0320270 | Msa1406720 | 0.819035 | 1.434459e-52 | -8.615850e-47 |
| Msa0320270 | Msa1410190 | 0.911296 | 7.136554e-83 | -8.615850e-47 |
| Msa0320270 | Msa1424370 | 0.878816 | 2.068172e-69 | -8.615850e-47 |
| Msa0320270 | Msa1434640 | 0.807949 | 3.936824e-50 | -8.615850e-47 |
| Msa0320270 | Msa1435100 | 0.801153 | 1.029650e-48 | -8.615850e-47 |
| Msa0320270 | Msa1439730 | 0.809671 | 1.686578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320270 | MtrunA17_Chr5g0410931 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr5g0410951 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr8g0383851 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr8g0383781 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr8g0390361 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr2g0295191 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr7g0237661 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr4g0033041 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr7g0218971 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr4g0046301 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr8g0364801 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320270 | MtrunA17_Chr4g0054161 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320270 | MtrunA17_Chr8g0363741 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320270 | MtrunA17_Chr1g0156021 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320270 | MtrunA17_Chr4g0054151 | 97.059 | 136 | 4 | 0 | 1 | 136 | 4 | 139 | 2.61e-93 | 265 |
| Msa0320270 | MtrunA17_Chr8g0388121 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.09e-92 | 264 |
| Msa0320270 | MtrunA17_Chr2g0319141 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0320270 | MtrunA17_Chr2g0319151 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0320270 | MtrunA17_Chr2g0319131 | 85.616 | 146 | 11 | 1 | 1 | 136 | 1 | 146 | 1.38e-82 | 238 |
| Msa0320270 | MtrunA17_Chr2g0319121 | 84.559 | 136 | 19 | 2 | 1 | 135 | 1 | 135 | 5.82e-75 | 219 |
| Msa0320270 | MtrunA17_Chr7g0218961 | 86.607 | 112 | 15 | 0 | 25 | 136 | 2 | 113 | 8.01e-66 | 195 |
| Msa0320270 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 1 | 134 | 10 | 142 | 5.47e-56 | 171 |
| Msa0320270 | MtrunA17_Chr5g0407311 | 67.241 | 116 | 35 | 2 | 1 | 116 | 1 | 113 | 1.29e-45 | 144 |
| Msa0320270 | MtrunA17_Chr7g0223001 | 58.647 | 133 | 41 | 3 | 3 | 134 | 27 | 146 | 5.46e-43 | 139 |
| Msa0320270 | MtrunA17_Chr7g0240791 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 9.61e-41 | 133 |
| Msa0320270 | MtrunA17_Chr8g0347231 | 55.102 | 98 | 43 | 1 | 37 | 133 | 28 | 125 | 3.80e-30 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320270 | AT1G09200.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320270 | AT5G65360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320270 | AT5G10390.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320270 | AT5G10400.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320270 | AT3G27360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320270 | AT4G40030.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40030.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40030.4 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT5G10980.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40040.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40040.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40040.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320270 | AT4G40030.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 29 | 164 | 7.05e-93 | 266 |
| Msa0320270 | AT5G65350.1 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 5.30e-91 | 260 |
| Msa0320270 | AT1G75600.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 1.25e-89 | 256 |
| Msa0320270 | AT1G13370.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 5.55e-89 | 254 |
| Msa0320270 | AT1G19890.1 | 89.781 | 137 | 13 | 1 | 1 | 136 | 1 | 137 | 1.07e-83 | 241 |
| Msa0320270 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 9.90e-67 | 198 |
| Msa0320270 | AT1G01370.2 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320270 | AT1G01370.1 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320270 | AT1G01370.4 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320270 | AT1G01370.3 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
Find 38 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAAGCTCAGTGCTCTTC+TGG | 0.304985 | 2_4:-20520963 | None:intergenic |
| TCACGAAGTGCGACGGTTCC+TGG | 0.318785 | 2_4:-20520928 | None:intergenic |
| GCTGCTGAAGCTTATCTTGT+TGG | 0.357332 | 2_4:+20521084 | Msa0320270:CDS |
| GAAGCTTCCATTTCAAAGAT+TGG | 0.365481 | 2_4:+20520990 | Msa0320270:CDS |
| TCTCGAACCAATCTTTGAAA+TGG | 0.396886 | 2_4:-20520997 | None:intergenic |
| GGATTTGCGGGCTGTTTGTT+TGG | 0.425629 | 2_4:-20520809 | None:intergenic |
| CGGAAATCCGCTCCGGCGAC+AGG | 0.432465 | 2_4:+20520877 | Msa0320270:CDS |
| TTCTTCACTCCTCCTGTCGC+CGG | 0.451049 | 2_4:-20520889 | None:intergenic |
| GGATTTCCGAGCGGCCTTTG+TGG | 0.451322 | 2_4:-20520863 | None:intergenic |
| GAGCAGAAACAGCACTACTC+TGG | 0.498444 | 2_4:-20521053 | None:intergenic |
| AAGCCCCACCGTTTCCGTCC+AGG | 0.502650 | 2_4:+20520910 | Msa0320270:CDS |
| CGACGGTTCCTGGACGGAAA+CGG | 0.511490 | 2_4:-20520918 | None:intergenic |
| TTGTGCTATTCATGCTAAGA+GGG | 0.513784 | 2_4:+20521128 | Msa0320270:CDS |
| GGTTCCTGGACGGAAACGGT+GGG | 0.514668 | 2_4:-20520914 | None:intergenic |
| GGCCGCTCGGAAATCCGCTC+CGG | 0.522574 | 2_4:+20520870 | Msa0320270:CDS |
| CAAACAGCCCGCAAATCCAC+CGG | 0.524480 | 2_4:+20520814 | Msa0320270:CDS |
| AGAGCACTGAGCTTCTCATA+AGG | 0.531497 | 2_4:+20520968 | Msa0320270:CDS |
| CGGTTCCTGGACGGAAACGG+TGG | 0.532129 | 2_4:-20520915 | None:intergenic |
| AAACAGCACTACTCTGGAAA+CGG | 0.532210 | 2_4:-20521047 | None:intergenic |
| GAGGGTTACTATTATGCCTA+AGG | 0.533362 | 2_4:+20521146 | Msa0320270:CDS |
| CTCGCAAGCTGAATATCCTT+AGG | 0.533935 | 2_4:-20521162 | None:intergenic |
| TTTGTGCTATTCATGCTAAG+AGG | 0.537531 | 2_4:+20521127 | Msa0320270:CDS |
| AACTCGCCACAAAGGCCGCT+CGG | 0.542091 | 2_4:+20520857 | Msa0320270:CDS |
| CAGTGCTCTTCTGGTACTTG+CGG | 0.559165 | 2_4:-20520954 | None:intergenic |
| CACTCCTCCTGTCGCCGGAG+CGG | 0.564263 | 2_4:-20520884 | None:intergenic |
| GAGAAGAATCAGAGGCGAAA+GGG | 0.568256 | 2_4:+20521182 | Msa0320270:CDS |
| CGAGAAGAATCAGAGGCGAA+AGG | 0.575054 | 2_4:+20521181 | Msa0320270:CDS |
| AATCGCTCAGGATTTCAAAA+CGG | 0.576806 | 2_4:+20521020 | Msa0320270:CDS |
| GCGGATTTCACGAAGTGCGA+CGG | 0.598942 | 2_4:-20520935 | None:intergenic |
| GTTCCTGGACGGAAACGGTG+GGG | 0.599384 | 2_4:-20520913 | None:intergenic |
| AAATCCGCTCCGGCGACAGG+AGG | 0.606452 | 2_4:+20520880 | Msa0320270:CDS |
| ATTGGTTCGAGAAATCGCTC+AGG | 0.615789 | 2_4:+20521008 | Msa0320270:CDS |
| ACGCAAACAACTCGCCACAA+AGG | 0.618065 | 2_4:+20520849 | Msa0320270:CDS |
| GAAGTGCGACGGTTCCTGGA+CGG | 0.655834 | 2_4:-20520924 | None:intergenic |
| ACAGCCCGCAAATCCACCGG+CGG | 0.662314 | 2_4:+20520817 | Msa0320270:CDS |
| CAGCTTGCGAGAAGAATCAG+AGG | 0.668283 | 2_4:+20521174 | Msa0320270:CDS |
| TTTGTGGCGAGTTGTTTGCG+TGG | 0.694492 | 2_4:-20520847 | None:intergenic |
| CGCCGGAGCGGATTTCCGAG+CGG | 0.708755 | 2_4:-20520872 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GAAGCTTCCATTTCAAAGAT+TGG | + | chr2_4:20520990-20521009 | Msa0320270:CDS | 35.0% | |
| ! | TCTCGAACCAATCTTTGAAA+TGG | - | chr2_4:20521000-20521019 | None:intergenic | 35.0% |
| AATCGCTCAGGATTTCAAAA+CGG | + | chr2_4:20521020-20521039 | Msa0320270:CDS | 35.0% | |
| ! | TTTGTGCTATTCATGCTAAG+AGG | + | chr2_4:20521127-20521146 | Msa0320270:CDS | 35.0% |
| ! | TTGTGCTATTCATGCTAAGA+GGG | + | chr2_4:20521128-20521147 | Msa0320270:CDS | 35.0% |
| ! | AAACAGCACTACTCTGGAAA+CGG | - | chr2_4:20521050-20521069 | None:intergenic | 40.0% |
| GAGGGTTACTATTATGCCTA+AGG | + | chr2_4:20521146-20521165 | Msa0320270:CDS | 40.0% | |
| !! | AGAGCACTGAGCTTCTCATA+AGG | + | chr2_4:20520968-20520987 | Msa0320270:CDS | 45.0% |
| !! | ATTGGTTCGAGAAATCGCTC+AGG | + | chr2_4:20521008-20521027 | Msa0320270:CDS | 45.0% |
| GCTGCTGAAGCTTATCTTGT+TGG | + | chr2_4:20521084-20521103 | Msa0320270:CDS | 45.0% | |
| CTCGCAAGCTGAATATCCTT+AGG | - | chr2_4:20521165-20521184 | None:intergenic | 45.0% | |
| GAGAAGAATCAGAGGCGAAA+GGG | + | chr2_4:20521182-20521201 | Msa0320270:CDS | 45.0% | |
| ! | GGATTTGCGGGCTGTTTGTT+TGG | - | chr2_4:20520812-20520831 | None:intergenic | 50.0% |
| TTTGTGGCGAGTTGTTTGCG+TGG | - | chr2_4:20520850-20520869 | None:intergenic | 50.0% | |
| ACGCAAACAACTCGCCACAA+AGG | + | chr2_4:20520849-20520868 | Msa0320270:CDS | 50.0% | |
| CAGTGCTCTTCTGGTACTTG+CGG | - | chr2_4:20520957-20520976 | None:intergenic | 50.0% | |
| TGAGAAGCTCAGTGCTCTTC+TGG | - | chr2_4:20520966-20520985 | None:intergenic | 50.0% | |
| GAGCAGAAACAGCACTACTC+TGG | - | chr2_4:20521056-20521075 | None:intergenic | 50.0% | |
| CAGCTTGCGAGAAGAATCAG+AGG | + | chr2_4:20521174-20521193 | Msa0320270:CDS | 50.0% | |
| CGAGAAGAATCAGAGGCGAA+AGG | + | chr2_4:20521181-20521200 | Msa0320270:CDS | 50.0% | |
| CAAACAGCCCGCAAATCCAC+CGG | + | chr2_4:20520814-20520833 | Msa0320270:CDS | 55.0% | |
| !! | TTTTCCGCCGGTGGATTTGC+GGG | - | chr2_4:20520824-20520843 | None:intergenic | 55.0% |
| !! | CTTTTCCGCCGGTGGATTTG+CGG | - | chr2_4:20520825-20520844 | None:intergenic | 55.0% |
| ! | TTTGCGTGGTGCTTTTCCGC+CGG | - | chr2_4:20520836-20520855 | None:intergenic | 55.0% |
| TTCTTCACTCCTCCTGTCGC+CGG | - | chr2_4:20520892-20520911 | None:intergenic | 55.0% | |
| GCGGATTTCACGAAGTGCGA+CGG | - | chr2_4:20520938-20520957 | None:intergenic | 55.0% | |
| AACTCGCCACAAAGGCCGCT+CGG | + | chr2_4:20520857-20520876 | Msa0320270:CDS | 60.0% | |
| GGATTTCCGAGCGGCCTTTG+TGG | - | chr2_4:20520866-20520885 | None:intergenic | 60.0% | |
| GTTCCTGGACGGAAACGGTG+GGG | - | chr2_4:20520916-20520935 | None:intergenic | 60.0% | |
| GGTTCCTGGACGGAAACGGT+GGG | - | chr2_4:20520917-20520936 | None:intergenic | 60.0% | |
| CGACGGTTCCTGGACGGAAA+CGG | - | chr2_4:20520921-20520940 | None:intergenic | 60.0% | |
| GAAGTGCGACGGTTCCTGGA+CGG | - | chr2_4:20520927-20520946 | None:intergenic | 60.0% | |
| TCACGAAGTGCGACGGTTCC+TGG | - | chr2_4:20520931-20520950 | None:intergenic | 60.0% | |
| ACAGCCCGCAAATCCACCGG+CGG | + | chr2_4:20520817-20520836 | Msa0320270:CDS | 65.0% | |
| AAATCCGCTCCGGCGACAGG+AGG | + | chr2_4:20520880-20520899 | Msa0320270:CDS | 65.0% | |
| AAGCCCCACCGTTTCCGTCC+AGG | + | chr2_4:20520910-20520929 | Msa0320270:CDS | 65.0% | |
| CGGTTCCTGGACGGAAACGG+TGG | - | chr2_4:20520918-20520937 | None:intergenic | 65.0% | |
| ! | GCGTGGTGCTTTTCCGCCGG+TGG | - | chr2_4:20520833-20520852 | None:intergenic | 70.0% |
| GGCCGCTCGGAAATCCGCTC+CGG | + | chr2_4:20520870-20520889 | Msa0320270:CDS | 70.0% | |
| ! | CGCCGGAGCGGATTTCCGAG+CGG | - | chr2_4:20520875-20520894 | None:intergenic | 70.0% |
| CGGAAATCCGCTCCGGCGAC+AGG | + | chr2_4:20520877-20520896 | Msa0320270:CDS | 70.0% | |
| CACTCCTCCTGTCGCCGGAG+CGG | - | chr2_4:20520887-20520906 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 20520799 | 20521209 | 20520799 | ID=Msa0320270;Name=Msa0320270 |
| chr2_4 | mRNA | 20520799 | 20521209 | 20520799 | ID=Msa0320270-mRNA-1;Parent=Msa0320270;Name=Msa0320270-mRNA-1;_AED=0.43;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|136 |
| chr2_4 | exon | 20520799 | 20521209 | 20520799 | ID=Msa0320270-mRNA-1:exon:7551;Parent=Msa0320270-mRNA-1 |
| chr2_4 | CDS | 20520799 | 20521209 | 20520799 | ID=Msa0320270-mRNA-1:cds;Parent=Msa0320270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
