Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523380 | XP_013462271.1 | 97.297 | 222 | 6 | 0 | 1 | 222 | 1 | 222 | 1.01e-154 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523380 | I3SCR3 | 97.297 | 222 | 6 | 0 | 1 | 222 | 1 | 222 | 4.83e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0523380 | 0.809573 | 1.770077e-50 | -8.615850e-47 |
| Msa0016530 | Msa0523380 | 0.850585 | 1.543965e-60 | -8.615850e-47 |
| Msa0027800 | Msa0523380 | 0.822385 | 2.437158e-53 | -8.615850e-47 |
| Msa0030070 | Msa0523380 | 0.855472 | 6.165507e-62 | -8.615850e-47 |
| Msa0030690 | Msa0523380 | 0.807491 | 4.926110e-50 | -8.615850e-47 |
| Msa0032980 | Msa0523380 | 0.843874 | 1.071337e-58 | -8.615850e-47 |
| Msa0040640 | Msa0523380 | 0.800694 | 1.277749e-48 | -8.615850e-47 |
| Msa0053070 | Msa0523380 | 0.810684 | 1.020124e-50 | -8.615850e-47 |
| Msa0057640 | Msa0523380 | 0.826403 | 2.765982e-54 | -8.615850e-47 |
| Msa0062340 | Msa0523380 | 0.811046 | 8.514981e-51 | -8.615850e-47 |
| Msa0067380 | Msa0523380 | 0.810282 | 1.245737e-50 | -8.615850e-47 |
| Msa0078130 | Msa0523380 | 0.830250 | 3.263902e-55 | -8.615850e-47 |
| Msa0091350 | Msa0523380 | 0.871841 | 5.023470e-67 | -8.615850e-47 |
| Msa0093860 | Msa0523380 | 0.818147 | 2.281726e-52 | -8.615850e-47 |
| Msa0098410 | Msa0523380 | 0.834653 | 2.646766e-56 | -8.615850e-47 |
| Msa0100600 | Msa0523380 | 0.800030 | 1.744438e-48 | -8.615850e-47 |
| Msa0103200 | Msa0523380 | 0.810441 | 1.150650e-50 | -8.615850e-47 |
| Msa0106630 | Msa0523380 | 0.863859 | 1.842445e-64 | -8.615850e-47 |
| Msa0123320 | Msa0523380 | 0.834054 | 3.740855e-56 | -8.615850e-47 |
| Msa0125590 | Msa0523380 | 0.864518 | 1.148264e-64 | -8.615850e-47 |
| Msa0127340 | Msa0523380 | 0.850123 | 2.080643e-60 | -8.615850e-47 |
| Msa0127680 | Msa0523380 | 0.814663 | 1.374001e-51 | -8.615850e-47 |
| Msa0140380 | Msa0523380 | 0.853816 | 1.860383e-61 | -8.615850e-47 |
| Msa0153210 | Msa0523380 | 0.867042 | 1.831236e-65 | -8.615850e-47 |
| Msa0159590 | Msa0523380 | 0.801034 | 1.089289e-48 | -8.615850e-47 |
| Msa0160160 | Msa0523380 | 0.816405 | 5.624842e-52 | -8.615850e-47 |
| Msa0160170 | Msa0523380 | 0.820048 | 8.425189e-53 | -8.615850e-47 |
| Msa0160290 | Msa0523380 | 0.821246 | 4.470679e-53 | -8.615850e-47 |
| Msa0165830 | Msa0523380 | 0.854655 | 1.064894e-61 | -8.615850e-47 |
| Msa0170070 | Msa0523380 | 0.838728 | 2.420598e-57 | -8.615850e-47 |
| Msa0184700 | Msa0523380 | 0.804205 | 2.415580e-49 | -8.615850e-47 |
| Msa0186180 | Msa0523380 | 0.829177 | 5.956710e-55 | -8.615850e-47 |
| Msa0186360 | Msa0523380 | 0.917066 | 8.344143e-86 | -8.615850e-47 |
| Msa0225800 | Msa0523380 | 0.800939 | 1.139171e-48 | -8.615850e-47 |
| Msa0364680 | Msa0523380 | 0.815638 | 8.345057e-52 | -8.615850e-47 |
| Msa0368860 | Msa0523380 | 0.818201 | 2.218261e-52 | -8.615850e-47 |
| Msa0373170 | Msa0523380 | 0.860137 | 2.546330e-63 | -8.615850e-47 |
| Msa0373590 | Msa0523380 | 0.816896 | 4.366750e-52 | -8.615850e-47 |
| Msa0382230 | Msa0523380 | 0.823529 | 1.318802e-53 | -8.615850e-47 |
| Msa0383000 | Msa0523380 | 0.826273 | 2.969427e-54 | -8.615850e-47 |
| Msa0412130 | Msa0523380 | 0.839085 | 1.956411e-57 | -8.615850e-47 |
| Msa0415820 | Msa0523380 | 0.818027 | 2.427704e-52 | -8.615850e-47 |
| Msa0416160 | Msa0523380 | 0.811850 | 5.695297e-51 | -8.615850e-47 |
| Msa0420670 | Msa0523380 | 0.837443 | 5.181953e-57 | -8.615850e-47 |
| Msa0421130 | Msa0523380 | 0.803394 | 3.560017e-49 | -8.615850e-47 |
| Msa0421750 | Msa0523380 | 0.861980 | 7.006358e-64 | -8.615850e-47 |
| Msa0433150 | Msa0523380 | 0.819609 | 1.061766e-52 | -8.615850e-47 |
| Msa0433630 | Msa0523380 | 0.817521 | 3.159168e-52 | -8.615850e-47 |
| Msa0433760 | Msa0523380 | 0.848917 | 4.513842e-60 | -8.615850e-47 |
| Msa0456670 | Msa0523380 | 0.809955 | 1.464656e-50 | -8.615850e-47 |
| Msa0461550 | Msa0523380 | 0.801673 | 8.056840e-49 | -8.615850e-47 |
| Msa0462780 | Msa0523380 | 0.818585 | 1.815513e-52 | -8.615850e-47 |
| Msa0466520 | Msa0523380 | 0.833898 | 4.093273e-56 | -8.615850e-47 |
| Msa0466880 | Msa0523380 | 0.800515 | 1.390111e-48 | -8.615850e-47 |
| Msa0467690 | Msa0523380 | 0.858206 | 9.658360e-63 | -8.615850e-47 |
| Msa0468620 | Msa0523380 | 0.815730 | 7.957041e-52 | -8.615850e-47 |
| Msa0477630 | Msa0523380 | 0.841787 | 3.844201e-58 | -8.615850e-47 |
| Msa0478140 | Msa0523380 | 0.825619 | 4.245641e-54 | -8.615850e-47 |
| Msa0478200 | Msa0523380 | 0.822522 | 2.264919e-53 | -8.615850e-47 |
| Msa0480730 | Msa0523380 | 0.813873 | 2.053682e-51 | -8.615850e-47 |
| Msa0260630 | Msa0523380 | 0.806066 | 9.854248e-50 | -8.615850e-47 |
| Msa0281540 | Msa0523380 | 0.814764 | 1.304732e-51 | -8.615850e-47 |
| Msa0320250 | Msa0523380 | 0.800056 | 1.723850e-48 | -8.615850e-47 |
| Msa0320270 | Msa0523380 | 0.800070 | 1.712683e-48 | -8.615850e-47 |
| Msa0320290 | Msa0523380 | 0.806824 | 6.817702e-50 | -8.615850e-47 |
| Msa0320580 | Msa0523380 | 0.821720 | 3.474544e-53 | -8.615850e-47 |
| Msa0341680 | Msa0523380 | 0.810531 | 1.100619e-50 | -8.615850e-47 |
| Msa0344110 | Msa0523380 | 0.823843 | 1.113201e-53 | -8.615850e-47 |
| Msa0503990 | Msa0523380 | 0.816362 | 5.750187e-52 | -8.615850e-47 |
| Msa0506540 | Msa0523380 | 0.806840 | 6.765365e-50 | -8.615850e-47 |
| Msa0506880 | Msa0523380 | 0.826155 | 3.167493e-54 | -8.615850e-47 |
| Msa0507810 | Msa0523380 | 0.838502 | 2.768839e-57 | -8.615850e-47 |
| Msa0507820 | Msa0523380 | 0.836996 | 6.743385e-57 | -8.615850e-47 |
| Msa0507920 | Msa0523380 | 0.832312 | 1.015449e-55 | -8.615850e-47 |
| Msa0512530 | Msa0523380 | 0.842901 | 1.948408e-58 | -8.615850e-47 |
| Msa0513080 | Msa0523380 | 0.804110 | 2.528058e-49 | -8.615850e-47 |
| Msa0513560 | Msa0523380 | 0.828156 | 1.051414e-54 | -8.615850e-47 |
| Msa0514020 | Msa0523380 | 0.865485 | 5.706482e-65 | -8.615850e-47 |
| Msa0514500 | Msa0523380 | 0.816489 | 5.385805e-52 | -8.615850e-47 |
| Msa0520680 | Msa0523380 | 0.826292 | 2.939679e-54 | -8.615850e-47 |
| Msa0520870 | Msa0523380 | 0.836998 | 6.734290e-57 | -8.615850e-47 |
| Msa0521680 | Msa0523380 | 0.843273 | 1.550973e-58 | -8.615850e-47 |
| Msa0523380 | Msa0524320 | 0.808205 | 3.472480e-50 | -8.615850e-47 |
| Msa0523380 | Msa0524430 | 0.809236 | 2.090416e-50 | -8.615850e-47 |
| Msa0523380 | Msa0524520 | 0.818075 | 2.367880e-52 | -8.615850e-47 |
| Msa0523380 | Msa0527850 | 0.847094 | 1.436846e-59 | -8.615850e-47 |
| Msa0523380 | Msa0541740 | 0.824253 | 8.921217e-54 | -8.615850e-47 |
| Msa0523380 | Msa0544410 | 0.827283 | 1.704244e-54 | -8.615850e-47 |
| Msa0523380 | Msa0548000 | 0.813906 | 2.019341e-51 | -8.615850e-47 |
| Msa0523380 | Msa0550590 | 0.816803 | 4.581502e-52 | -8.615850e-47 |
| Msa0523380 | Msa0553750 | 0.813718 | 2.221553e-51 | -8.615850e-47 |
| Msa0523380 | Msa0554300 | 0.870579 | 1.312082e-66 | -8.615850e-47 |
| Msa0523380 | Msa0559100 | 0.807810 | 4.214880e-50 | -8.615850e-47 |
| Msa0523380 | Msa0561560 | 0.837378 | 5.383924e-57 | -8.615850e-47 |
| Msa0523380 | Msa0563900 | 0.809306 | 2.019772e-50 | -8.615850e-47 |
| Msa0523380 | Msa0564980 | 0.806143 | 9.490122e-50 | -8.615850e-47 |
| Msa0523380 | Msa0572830 | 0.839881 | 1.215422e-57 | -8.615850e-47 |
| Msa0523380 | Msa0577280 | 0.815402 | 9.414992e-52 | -8.615850e-47 |
| Msa0523380 | Msa0577330 | 0.818126 | 2.305807e-52 | -8.615850e-47 |
| Msa0523380 | Msa0582460 | 0.835117 | 2.022330e-56 | -8.615850e-47 |
| Msa0523380 | Msa0584530 | 0.801261 | 9.786437e-49 | -8.615850e-47 |
| Msa0523380 | Msa0586200 | 0.837441 | 5.187839e-57 | -8.615850e-47 |
| Msa0523380 | Msa0603410 | 0.805301 | 1.426348e-49 | -8.615850e-47 |
| Msa0523380 | Msa0606100 | 0.818622 | 1.780478e-52 | -8.615850e-47 |
| Msa0523380 | Msa0607800 | 0.825473 | 4.598953e-54 | -8.615850e-47 |
| Msa0523380 | Msa0608350 | 0.826857 | 2.154654e-54 | -8.615850e-47 |
| Msa0523380 | Msa0612410 | 0.823264 | 1.521388e-53 | -8.615850e-47 |
| Msa0523380 | Msa0613630 | 0.826655 | 2.408107e-54 | -8.615850e-47 |
| Msa0523380 | Msa0615630 | 0.817824 | 2.698187e-52 | -8.615850e-47 |
| Msa0523380 | Msa0620500 | 0.846142 | 2.614634e-59 | -8.615850e-47 |
| Msa0523380 | Msa0622920 | 0.818403 | 1.996255e-52 | -8.615850e-47 |
| Msa0523380 | Msa0625620 | 0.829902 | 3.970179e-55 | -8.615850e-47 |
| Msa0523380 | Msa0640800 | 0.813816 | 2.113150e-51 | -8.615850e-47 |
| Msa0523380 | Msa0645340 | 0.822138 | 2.780410e-53 | -8.615850e-47 |
| Msa0523380 | Msa0647050 | 0.825877 | 3.689495e-54 | -8.615850e-47 |
| Msa0523380 | Msa0647440 | 0.850151 | 2.044147e-60 | -8.615850e-47 |
| Msa0523380 | Msa0648040 | 0.843724 | 1.174896e-58 | -8.615850e-47 |
| Msa0523380 | Msa0648760 | 0.864986 | 8.189137e-65 | -8.615850e-47 |
| Msa0523380 | Msa0654740 | 0.830031 | 3.691963e-55 | -8.615850e-47 |
| Msa0523380 | Msa0657210 | 0.821548 | 3.808033e-53 | -8.615850e-47 |
| Msa0523380 | Msa0663290 | 0.810215 | 1.287957e-50 | -8.615850e-47 |
| Msa0523380 | Msa0664070 | 0.808521 | 2.972940e-50 | -8.615850e-47 |
| Msa0523380 | Msa0688380 | 0.812544 | 4.019660e-51 | -8.615850e-47 |
| Msa0523380 | Msa0688620 | 0.820595 | 6.313810e-53 | -8.615850e-47 |
| Msa0523380 | Msa0690320 | 0.845080 | 5.074152e-59 | -8.615850e-47 |
| Msa0523380 | Msa0690570 | 0.803652 | 3.147275e-49 | -8.615850e-47 |
| Msa0523380 | Msa0690740 | 0.844064 | 9.524544e-59 | -8.615850e-47 |
| Msa0523380 | Msa0691270 | 0.844116 | 9.225747e-59 | -8.615850e-47 |
| Msa0523380 | Msa0698730 | 0.807881 | 4.070469e-50 | -8.615850e-47 |
| Msa0523380 | Msa0701250 | 0.826076 | 3.308607e-54 | -8.615850e-47 |
| Msa0523380 | Msa0707260 | 0.820531 | 6.528633e-53 | -8.615850e-47 |
| Msa0523380 | Msa0713920 | 0.811143 | 8.112906e-51 | -8.615850e-47 |
| Msa0523380 | Msa0714520 | 0.857477 | 1.588958e-62 | -8.615850e-47 |
| Msa0523380 | Msa0717830 | 0.802523 | 5.389195e-49 | -8.615850e-47 |
| Msa0523380 | Msa0717900 | 0.854400 | 1.262250e-61 | -8.615850e-47 |
| Msa0523380 | Msa0720280 | 0.830446 | 2.922939e-55 | -8.615850e-47 |
| Msa0523380 | Msa0737130 | 0.862056 | 6.639791e-64 | -8.615850e-47 |
| Msa0523380 | Msa0747740 | 0.830387 | 3.021856e-55 | -8.615850e-47 |
| Msa0523380 | Msa0749190 | 0.817089 | 3.950037e-52 | -8.615850e-47 |
| Msa0523380 | Msa0750520 | 0.817479 | 3.228075e-52 | -8.615850e-47 |
| Msa0523380 | Msa0758590 | 0.821124 | 4.770247e-53 | -8.615850e-47 |
| Msa0523380 | Msa0800660 | 0.821543 | 3.819031e-53 | -8.615850e-47 |
| Msa0523380 | Msa0803140 | 0.842378 | 2.682765e-58 | -8.615850e-47 |
| Msa0523380 | Msa0816080 | 0.853814 | 1.863060e-61 | -8.615850e-47 |
| Msa0523380 | Msa0816230 | 0.816131 | 6.477320e-52 | -8.615850e-47 |
| Msa0523380 | Msa0831620 | 0.809640 | 1.711930e-50 | -8.615850e-47 |
| Msa0523380 | Msa0837680 | 0.829157 | 6.021932e-55 | -8.615850e-47 |
| Msa0523380 | Msa0841500 | 0.845113 | 4.971521e-59 | -8.615850e-47 |
| Msa0523380 | Msa0861440 | 0.843228 | 1.593887e-58 | -8.615850e-47 |
| Msa0523380 | Msa0879920 | 0.833828 | 4.260700e-56 | -8.615850e-47 |
| Msa0523380 | Msa0900090 | 0.806283 | 8.866484e-50 | -8.615850e-47 |
| Msa0523380 | Msa0900760 | 0.808892 | 2.477598e-50 | -8.615850e-47 |
| Msa0523380 | Msa0909760 | 0.827746 | 1.319745e-54 | -8.615850e-47 |
| Msa0523380 | Msa0926310 | 0.837025 | 6.630711e-57 | -8.615850e-47 |
| Msa0523380 | Msa0931590 | 0.806523 | 7.892771e-50 | -8.615850e-47 |
| Msa0523380 | Msa0966710 | 0.805967 | 1.033869e-49 | -8.615850e-47 |
| Msa0523380 | Msa0989370 | 0.830447 | 2.922631e-55 | -8.615850e-47 |
| Msa0523380 | Msa1000780 | 0.839806 | 1.271402e-57 | -8.615850e-47 |
| Msa0523380 | Msa1000970 | 0.834431 | 3.009655e-56 | -8.615850e-47 |
| Msa0523380 | Msa1008670 | 0.870573 | 1.317857e-66 | -8.615850e-47 |
| Msa0523380 | Msa1008680 | 0.834787 | 2.448504e-56 | -8.615850e-47 |
| Msa0523380 | Msa1033920 | 0.826520 | 2.592727e-54 | -8.615850e-47 |
| Msa0523380 | Msa1060900 | 0.812711 | 3.694924e-51 | -8.615850e-47 |
| Msa0523380 | Msa1071410 | 0.818510 | 1.887389e-52 | -8.615850e-47 |
| Msa0523380 | Msa1074150 | 0.818639 | 1.765270e-52 | -8.615850e-47 |
| Msa0523380 | Msa1076020 | 0.837063 | 6.484336e-57 | -8.615850e-47 |
| Msa0523380 | Msa1078860 | 0.827985 | 1.155724e-54 | -8.615850e-47 |
| Msa0523380 | Msa1078990 | 0.821449 | 4.014578e-53 | -8.615850e-47 |
| Msa0523380 | Msa1082380 | 0.846981 | 1.543077e-59 | -8.615850e-47 |
| Msa0523380 | Msa1106220 | 0.816639 | 4.985979e-52 | -8.615850e-47 |
| Msa0523380 | Msa1116190 | 0.810844 | 9.416828e-51 | -8.615850e-47 |
| Msa0523380 | Msa1127280 | 0.831791 | 1.366072e-55 | -8.615850e-47 |
| Msa0523380 | Msa1139050 | 0.823819 | 1.128198e-53 | -8.615850e-47 |
| Msa0523380 | Msa1148630 | 0.802637 | 5.103258e-49 | -8.615850e-47 |
| Msa0523380 | Msa1149450 | 0.823435 | 1.387235e-53 | -8.615850e-47 |
| Msa0523380 | Msa1159590 | 0.824557 | 7.567807e-54 | -8.615850e-47 |
| Msa0523380 | Msa1162880 | 0.843629 | 1.246083e-58 | -8.615850e-47 |
| Msa0523380 | Msa1163180 | 0.853719 | 1.984130e-61 | -8.615850e-47 |
| Msa0523380 | Msa1165480 | 0.836350 | 9.850078e-57 | -8.615850e-47 |
| Msa0523380 | Msa1169170 | 0.822153 | 2.758315e-53 | -8.615850e-47 |
| Msa0523380 | Msa1169690 | 0.835840 | 1.327596e-56 | -8.615850e-47 |
| Msa0523380 | Msa1171070 | 0.801849 | 7.415133e-49 | -8.615850e-47 |
| Msa0523380 | Msa1188790 | 0.800913 | 1.153224e-48 | -8.615850e-47 |
| Msa0523380 | Msa1190390 | 0.812016 | 5.241489e-51 | -8.615850e-47 |
| Msa0523380 | Msa1191000 | 0.801772 | 7.691905e-49 | -8.615850e-47 |
| Msa0523380 | Msa1206040 | 0.802645 | 5.085220e-49 | -8.615850e-47 |
| Msa0523380 | Msa1213830 | 0.812835 | 3.470512e-51 | -8.615850e-47 |
| Msa0523380 | Msa1214350 | 0.811458 | 6.931616e-51 | -8.615850e-47 |
| Msa0523380 | Msa1215980 | 0.847252 | 1.300575e-59 | -8.615850e-47 |
| Msa0523380 | Msa1219770 | 0.812336 | 4.463341e-51 | -8.615850e-47 |
| Msa0523380 | Msa1223390 | 0.831093 | 2.029424e-55 | -8.615850e-47 |
| Msa0523380 | Msa1231780 | 0.804057 | 2.593632e-49 | -8.615850e-47 |
| Msa0523380 | Msa1240940 | 0.814069 | 1.858643e-51 | -8.615850e-47 |
| Msa0523380 | Msa1254420 | 0.857114 | 2.034465e-62 | -8.615850e-47 |
| Msa0523380 | Msa1254540 | 0.855999 | 4.325084e-62 | -8.615850e-47 |
| Msa0523380 | Msa1261050 | 0.826772 | 2.257592e-54 | -8.615850e-47 |
| Msa0523380 | Msa1263740 | 0.835514 | 1.604994e-56 | -8.615850e-47 |
| Msa0523380 | Msa1263780 | 0.829310 | 5.529305e-55 | -8.615850e-47 |
| Msa0523380 | Msa1266690 | 0.804424 | 2.174594e-49 | -8.615850e-47 |
| Msa0523380 | Msa1267930 | 0.824685 | 7.058418e-54 | -8.615850e-47 |
| Msa0523380 | Msa1282300 | 0.813228 | 2.845724e-51 | -8.615850e-47 |
| Msa0523380 | Msa1294460 | 0.848460 | 6.043063e-60 | -8.615850e-47 |
| Msa0523380 | Msa1294790 | 0.871931 | 4.692122e-67 | -8.615850e-47 |
| Msa0523380 | Msa1297070 | 0.804184 | 2.439993e-49 | -8.615850e-47 |
| Msa0523380 | Msa1300460 | 0.835209 | 1.916867e-56 | -8.615850e-47 |
| Msa0523380 | Msa1301820 | 0.844058 | 9.562065e-59 | -8.615850e-47 |
| Msa0523380 | Msa1305780 | 0.817465 | 3.251535e-52 | -8.615850e-47 |
| Msa0523380 | Msa1305920 | 0.828776 | 7.448619e-55 | -8.615850e-47 |
| Msa0523380 | Msa1306790 | 0.805413 | 1.350823e-49 | -8.615850e-47 |
| Msa0523380 | Msa1321530 | 0.809713 | 1.651708e-50 | -8.615850e-47 |
| Msa0523380 | Msa1332950 | 0.834012 | 3.833831e-56 | -8.615850e-47 |
| Msa0523380 | Msa1333360 | 0.806423 | 8.286979e-50 | -8.615850e-47 |
| Msa0523380 | Msa1339170 | 0.847550 | 1.077112e-59 | -8.615850e-47 |
| Msa0523380 | Msa1339230 | 0.847208 | 1.336965e-59 | -8.615850e-47 |
| Msa0523380 | Msa1361930 | 0.831950 | 1.248207e-55 | -8.615850e-47 |
| Msa0523380 | Msa1368750 | 0.800527 | 1.382183e-48 | -8.615850e-47 |
| Msa0523380 | Msa1374790 | 0.806634 | 7.478394e-50 | -8.615850e-47 |
| Msa0523380 | Msa1381470 | 0.840880 | 6.660696e-58 | -8.615850e-47 |
| Msa0523380 | Msa1381800 | 0.817758 | 2.792802e-52 | -8.615850e-47 |
| Msa0523380 | Msa1387500 | 0.824289 | 8.749542e-54 | -8.615850e-47 |
| Msa0523380 | Msa1390210 | 0.808629 | 2.820073e-50 | -8.615850e-47 |
| Msa0523380 | Msa1393560 | 0.833269 | 5.876155e-56 | -8.615850e-47 |
| Msa0523380 | Msa1399190 | 0.830563 | 2.736736e-55 | -8.615850e-47 |
| Msa0523380 | Msa1406720 | 0.835945 | 1.248792e-56 | -8.615850e-47 |
| Msa0523380 | Msa1410190 | 0.809024 | 2.320666e-50 | -8.615850e-47 |
| Msa0523380 | Msa1426320 | 0.824683 | 7.065861e-54 | -8.615850e-47 |
| Msa0523380 | Msa1432520 | 0.828093 | 1.088757e-54 | -8.615850e-47 |
| Msa0523380 | Msa1434640 | 0.847999 | 8.105324e-60 | -8.615850e-47 |
| Msa0523380 | Msa1435100 | 0.810857 | 9.355462e-51 | -8.615850e-47 |
| Msa0523380 | Msa1439730 | 0.819983 | 8.720703e-53 | -8.615850e-47 |
| Msa0523380 | Msa1442260 | 0.822415 | 2.397706e-53 | -8.615850e-47 |
| Msa0523380 | Msa1450190 | 0.810216 | 1.287352e-50 | -8.615850e-47 |
| Msa0523380 | Msa1451820 | 0.805438 | 1.334925e-49 | -8.615850e-47 |
| Msa0523380 | Msa1457840 | 0.808526 | 2.966346e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523380 | MtrunA17_Chr3g0143871 | 97.297 | 222 | 6 | 0 | 1 | 222 | 1 | 222 | 9.30e-159 | 438 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523380 | AT5G42330.1 | 47.208 | 197 | 83 | 10 | 6 | 194 | 2 | 185 | 1.04e-36 | 128 |
Find 66 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTATAACGGTCATATTT+TGG | 0.147501 | 3_4:+76720321 | None:intergenic |
| TGAAACAGAACACCAGATTT+AGG | 0.204443 | 3_4:+76719820 | None:intergenic |
| GAAGCAATTGTGCGGTATTC+AGG | 0.265276 | 3_4:+76719928 | None:intergenic |
| TCGGTCGCGGTGGTCGGAGG+TGG | 0.289193 | 3_4:+76720174 | None:intergenic |
| TGGTCGGAGGTGGGATTTCA+TGG | 0.291163 | 3_4:+76720184 | None:intergenic |
| GAAACAGAACACCAGATTTA+GGG | 0.318085 | 3_4:+76719821 | None:intergenic |
| CCAGATCCGGAAGAAATTAA+TGG | 0.326179 | 3_4:-76719859 | Msa0523380:CDS |
| CCATTAATTTCTTCCGGATC+TGG | 0.333300 | 3_4:+76719859 | None:intergenic |
| TTTAACCAAGTCTCGGAAAC+TGG | 0.342643 | 3_4:-76719971 | Msa0523380:CDS |
| AGATTTAGGGTTACAAGAAT+TGG | 0.342948 | 3_4:+76719834 | None:intergenic |
| ACTTGATTTAATATGATGTA+TGG | 0.345815 | 3_4:-76719404 | Msa0523380:three_prime_UTR |
| CTTGGTGTTACTGTTGAATC+TGG | 0.346379 | 3_4:-76719667 | Msa0523380:CDS |
| TTGGTACCATTAATTTCTTC+CGG | 0.348296 | 3_4:+76719853 | None:intergenic |
| ATGATGAGTATTCTGCAAAA+AGG | 0.356084 | 3_4:-76719783 | Msa0523380:CDS |
| CGAAGACGCATCGGAGACTT+AGG | 0.358488 | 3_4:+76720149 | None:intergenic |
| CGGTATTCAGGTCGTAGTTC+AGG | 0.361330 | 3_4:+76719940 | None:intergenic |
| AATAATCATCATAATGTTCT+TGG | 0.387259 | 3_4:-76719685 | Msa0523380:CDS |
| AATTCTTGTAACCCTAAATC+TGG | 0.396987 | 3_4:-76719832 | Msa0523380:CDS |
| TATATAATGAATAAATCAAA+TGG | 0.403779 | 3_4:+76719309 | None:intergenic |
| AGGATGGTTCGTGACGAGTT+TGG | 0.412043 | 3_4:-76719886 | Msa0523380:CDS |
| CTGAATTTATTGCTTTATCA+AGG | 0.412653 | 3_4:-76719906 | Msa0523380:CDS |
| AATCCACAACATCAGCCGTT+TGG | 0.434468 | 3_4:-76720346 | Msa0523380:five_prime_UTR |
| AAGAATACTGCAAGAAAACT+TGG | 0.439698 | 3_4:-76719640 | Msa0523380:CDS |
| CCCTCTCTTCAAACTCCACC+AGG | 0.453304 | 3_4:-76720104 | Msa0523380:intron |
| GAGAGGTTGAAGAGAAAGAA+AGG | 0.462625 | 3_4:-76719757 | Msa0523380:CDS |
| TAGGGATCGGTCGCGGTGGT+CGG | 0.470489 | 3_4:+76720168 | None:intergenic |
| TTGAACCAGTTTCCGAGACT+TGG | 0.470567 | 3_4:+76719966 | None:intergenic |
| CGGTCGCGGTGGTCGGAGGT+GGG | 0.481693 | 3_4:+76720175 | None:intergenic |
| GTAGCGAGGGTTTGAGTCAA+AGG | 0.490870 | 3_4:+76720282 | None:intergenic |
| ATTTATTGCTTTATCAAGGA+TGG | 0.497038 | 3_4:-76719902 | Msa0523380:CDS |
| AATAAGAAACCTCCTCTAGC+TGG | 0.510440 | 3_4:-76719532 | Msa0523380:CDS |
| CGAGTTTGGAAAACCAGATC+CGG | 0.511115 | 3_4:-76719872 | Msa0523380:CDS |
| AAAATGTATCAATTTCCATT+CGG | 0.511455 | 3_4:+76719341 | None:intergenic |
| TACTAGTATTAAGCAAACTA+AGG | 0.520435 | 3_4:-76719710 | Msa0523380:CDS |
| GTTGGAGCATCGAGAAGAGT+AGG | 0.523400 | 3_4:-76719469 | Msa0523380:CDS |
| ACTGTTGGTGAGAAGAAAGT+TGG | 0.529021 | 3_4:-76719487 | Msa0523380:CDS |
| GGATCGGTCGCGGTGGTCGG+AGG | 0.529657 | 3_4:+76720171 | None:intergenic |
| CCTGGTGGAGTTTGAAGAGA+GGG | 0.535099 | 3_4:+76720104 | None:intergenic |
| CATGCTTAGAAGCATGACTA+AGG | 0.538545 | 3_4:-76719557 | Msa0523380:CDS |
| GATCCAAACGGCTGATGTTG+TGG | 0.542078 | 3_4:+76720343 | None:intergenic |
| ATATAATGAATAAATCAAAT+GGG | 0.543691 | 3_4:+76719310 | None:intergenic |
| CAGGTTCTTTAACCAAGTCT+CGG | 0.545491 | 3_4:-76719978 | Msa0523380:CDS |
| TTCTGCTGCTTATTCTGCTG+AGG | 0.545660 | 3_4:-76719599 | Msa0523380:CDS |
| TGTGACTGAAAATGCGGTGC+GGG | 0.546036 | 3_4:+76720236 | None:intergenic |
| CTTGATTTAATATGATGTAT+GGG | 0.551596 | 3_4:-76719403 | Msa0523380:three_prime_UTR |
| TTTGATAAATCTGTTACTGT+TGG | 0.555181 | 3_4:-76719502 | Msa0523380:CDS |
| ACCTGGTGGAGTTTGAAGAG+AGG | 0.555239 | 3_4:+76720103 | None:intergenic |
| GAAGACGCATCGGAGACTTA+GGG | 0.556071 | 3_4:+76720150 | None:intergenic |
| ATAGAAGAGAGCGTCTATAA+CGG | 0.577974 | 3_4:+76720310 | None:intergenic |
| TCAAATCTTGAACCAGCTAG+AGG | 0.605228 | 3_4:+76719520 | None:intergenic |
| CGCATCGGAGACTTAGGGAT+CGG | 0.618390 | 3_4:+76720155 | None:intergenic |
| ATGCTTCTAAGCATGTACCT+TGG | 0.620137 | 3_4:+76719565 | None:intergenic |
| AAGAGAGGGAGAGTCAAGAA+CGG | 0.623596 | 3_4:+76720118 | None:intergenic |
| GTTCGAGTTCGAAGACGCAT+CGG | 0.624113 | 3_4:+76720140 | None:intergenic |
| GGAGACTTAGGGATCGGTCG+CGG | 0.628168 | 3_4:+76720161 | None:intergenic |
| AATCTTGAACCAGCTAGAGG+AGG | 0.634666 | 3_4:+76719523 | None:intergenic |
| GATTGTGGCAAAGAGTAGCG+AGG | 0.635030 | 3_4:+76720268 | None:intergenic |
| CTGAGGTTAGTGAAACTCCA+AGG | 0.641822 | 3_4:-76719582 | Msa0523380:CDS |
| GACTTAGGGATCGGTCGCGG+TGG | 0.645567 | 3_4:+76720164 | None:intergenic |
| ATTGTGGCAAAGAGTAGCGA+GGG | 0.654080 | 3_4:+76720269 | None:intergenic |
| GAAGAGAAAGAAAGGAGTCA+CGG | 0.667345 | 3_4:-76719749 | Msa0523380:CDS |
| TAAATTCAGAAGCAATTGTG+CGG | 0.689492 | 3_4:+76719920 | None:intergenic |
| TCTGGTGTTCTGTTTCAGAG+AGG | 0.698623 | 3_4:-76719814 | Msa0523380:CDS |
| GCAATGTGTGACTGAAAATG+CGG | 0.711864 | 3_4:+76720230 | None:intergenic |
| GAGAAAGAAAGGAGTCACGG+TGG | 0.729465 | 3_4:-76719746 | Msa0523380:CDS |
| GTGTGACTGAAAATGCGGTG+CGG | 0.745677 | 3_4:+76720235 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATCATCATAATGTTCT+TGG | - | chr3_4:76720005-76720024 | Msa0523380:intron | 20.0% |
| !! | ACTTGATTTAATATGATGTA+TGG | - | chr3_4:76720286-76720305 | Msa0523380:five_prime_UTR | 20.0% |
| !! | CTTGATTTAATATGATGTAT+GGG | - | chr3_4:76720287-76720306 | Msa0523380:five_prime_UTR | 20.0% |
| !! | AAAATGTATCAATTTCCATT+CGG | + | chr3_4:76720352-76720371 | None:intergenic | 20.0% |
| !! | AATAATCATCATAATGTTCT+TGG | - | chr3_4:76720005-76720024 | Msa0523380:intron | 20.0% |
| !! | ACTTGATTTAATATGATGTA+TGG | - | chr3_4:76720286-76720305 | Msa0523380:five_prime_UTR | 20.0% |
| !! | CTTGATTTAATATGATGTAT+GGG | - | chr3_4:76720287-76720306 | Msa0523380:five_prime_UTR | 20.0% |
| !! | AAAATGTATCAATTTCCATT+CGG | + | chr3_4:76720352-76720371 | None:intergenic | 20.0% |
| ! | GAAATAAGATTATAAGAACC+TGG | + | chr3_4:76719607-76719626 | None:intergenic | 25.0% |
| ! | CTGAATTTATTGCTTTATCA+AGG | - | chr3_4:76719784-76719803 | Msa0523380:CDS | 25.0% |
| ! | ATTTATTGCTTTATCAAGGA+TGG | - | chr3_4:76719788-76719807 | Msa0523380:CDS | 25.0% |
| ! | TACTAGTATTAAGCAAACTA+AGG | - | chr3_4:76719980-76719999 | Msa0523380:intron | 25.0% |
| ! | TTTGATAAATCTGTTACTGT+TGG | - | chr3_4:76720188-76720207 | Msa0523380:CDS | 25.0% |
| ! | AGGAAAAATTTCGTACTATT+AGG | - | chr3_4:76720241-76720260 | Msa0523380:five_prime_UTR | 25.0% |
| ! | GGAAAAATTTCGTACTATTA+GGG | - | chr3_4:76720242-76720261 | Msa0523380:five_prime_UTR | 25.0% |
| ! | GAAATAAGATTATAAGAACC+TGG | + | chr3_4:76719607-76719626 | None:intergenic | 25.0% |
| ! | CTGAATTTATTGCTTTATCA+AGG | - | chr3_4:76719784-76719803 | Msa0523380:CDS | 25.0% |
| ! | ATTTATTGCTTTATCAAGGA+TGG | - | chr3_4:76719788-76719807 | Msa0523380:CDS | 25.0% |
| ! | TACTAGTATTAAGCAAACTA+AGG | - | chr3_4:76719980-76719999 | Msa0523380:intron | 25.0% |
| ! | TTTGATAAATCTGTTACTGT+TGG | - | chr3_4:76720188-76720207 | Msa0523380:CDS | 25.0% |
| ! | AGGAAAAATTTCGTACTATT+AGG | - | chr3_4:76720241-76720260 | Msa0523380:five_prime_UTR | 25.0% |
| ! | GGAAAAATTTCGTACTATTA+GGG | - | chr3_4:76720242-76720261 | Msa0523380:five_prime_UTR | 25.0% |
| ATGTTGTGGATTTCAAAAAG+TGG | + | chr3_4:76719336-76719355 | None:intergenic | 30.0% | |
| ATAAGATTATAAGAACCTGG+TGG | + | chr3_4:76719604-76719623 | None:intergenic | 30.0% | |
| CCACAAACAAAAAATGTCAA+TGG | + | chr3_4:76719677-76719696 | None:intergenic | 30.0% | |
| !!! | CCATTGACATTTTTTGTTTG+TGG | - | chr3_4:76719674-76719693 | Msa0523380:CDS | 30.0% |
| GTGGATTTGAAAATTGAAAC+AGG | - | chr3_4:76719693-76719712 | Msa0523380:CDS | 30.0% | |
| TAAATTCAGAAGCAATTGTG+CGG | + | chr3_4:76719773-76719792 | None:intergenic | 30.0% | |
| TTGGTACCATTAATTTCTTC+CGG | + | chr3_4:76719840-76719859 | None:intergenic | 30.0% | |
| ! | AGATTTAGGGTTACAAGAAT+TGG | + | chr3_4:76719859-76719878 | None:intergenic | 30.0% |
| AATTCTTGTAACCCTAAATC+TGG | - | chr3_4:76719858-76719877 | Msa0523380:CDS | 30.0% | |
| ATGATGAGTATTCTGCAAAA+AGG | - | chr3_4:76719907-76719926 | Msa0523380:CDS | 30.0% | |
| AAGAATACTGCAAGAAAACT+TGG | - | chr3_4:76720050-76720069 | Msa0523380:intron | 30.0% | |
| !!! | TTCTGTTACTTTTTACCGAA+TGG | - | chr3_4:76720334-76720353 | Msa0523380:five_prime_UTR | 30.0% |
| ATGTTGTGGATTTCAAAAAG+TGG | + | chr3_4:76719336-76719355 | None:intergenic | 30.0% | |
| ATAAGATTATAAGAACCTGG+TGG | + | chr3_4:76719604-76719623 | None:intergenic | 30.0% | |
| CCACAAACAAAAAATGTCAA+TGG | + | chr3_4:76719677-76719696 | None:intergenic | 30.0% | |
| !!! | CCATTGACATTTTTTGTTTG+TGG | - | chr3_4:76719674-76719693 | Msa0523380:CDS | 30.0% |
| GTGGATTTGAAAATTGAAAC+AGG | - | chr3_4:76719693-76719712 | Msa0523380:CDS | 30.0% | |
| TAAATTCAGAAGCAATTGTG+CGG | + | chr3_4:76719773-76719792 | None:intergenic | 30.0% | |
| TTGGTACCATTAATTTCTTC+CGG | + | chr3_4:76719840-76719859 | None:intergenic | 30.0% | |
| ! | AGATTTAGGGTTACAAGAAT+TGG | + | chr3_4:76719859-76719878 | None:intergenic | 30.0% |
| AATTCTTGTAACCCTAAATC+TGG | - | chr3_4:76719858-76719877 | Msa0523380:CDS | 30.0% | |
| ATGATGAGTATTCTGCAAAA+AGG | - | chr3_4:76719907-76719926 | Msa0523380:CDS | 30.0% | |
| AAGAATACTGCAAGAAAACT+TGG | - | chr3_4:76720050-76720069 | Msa0523380:intron | 30.0% | |
| !!! | TTCTGTTACTTTTTACCGAA+TGG | - | chr3_4:76720334-76720353 | Msa0523380:five_prime_UTR | 30.0% |
| !! | GGTCATATTTTGGATCCAAA+CGG | + | chr3_4:76719362-76719381 | None:intergenic | 35.0% |
| ! | CGTCTATAACGGTCATATTT+TGG | + | chr3_4:76719372-76719391 | None:intergenic | 35.0% |
| !! | ATAGAAGAGAGCGTCTATAA+CGG | + | chr3_4:76719383-76719402 | None:intergenic | 35.0% |
| !! | TGCGGGTTTTTATTTGATTG+TGG | + | chr3_4:76719440-76719459 | None:intergenic | 35.0% |
| GAAACAGAACACCAGATTTA+GGG | + | chr3_4:76719872-76719891 | None:intergenic | 35.0% | |
| TGAAACAGAACACCAGATTT+AGG | + | chr3_4:76719873-76719892 | None:intergenic | 35.0% | |
| !! | GGTCATATTTTGGATCCAAA+CGG | + | chr3_4:76719362-76719381 | None:intergenic | 35.0% |
| ! | CGTCTATAACGGTCATATTT+TGG | + | chr3_4:76719372-76719391 | None:intergenic | 35.0% |
| !! | ATAGAAGAGAGCGTCTATAA+CGG | + | chr3_4:76719383-76719402 | None:intergenic | 35.0% |
| !! | TGCGGGTTTTTATTTGATTG+TGG | + | chr3_4:76719440-76719459 | None:intergenic | 35.0% |
| GAAACAGAACACCAGATTTA+GGG | + | chr3_4:76719872-76719891 | None:intergenic | 35.0% | |
| TGAAACAGAACACCAGATTT+AGG | + | chr3_4:76719873-76719892 | None:intergenic | 35.0% | |
| GCAATGTGTGACTGAAAATG+CGG | + | chr3_4:76719463-76719482 | None:intergenic | 40.0% | |
| CAGGTTCTTTAACCAAGTCT+CGG | - | chr3_4:76719712-76719731 | Msa0523380:CDS | 40.0% | |
| TTTAACCAAGTCTCGGAAAC+TGG | - | chr3_4:76719719-76719738 | Msa0523380:CDS | 40.0% | |
| CCATTAATTTCTTCCGGATC+TGG | + | chr3_4:76719834-76719853 | None:intergenic | 40.0% | |
| CCAGATCCGGAAGAAATTAA+TGG | - | chr3_4:76719831-76719850 | Msa0523380:CDS | 40.0% | |
| ATTCTGCAAAAAGGAACGAG+AGG | - | chr3_4:76719916-76719935 | Msa0523380:CDS | 40.0% | |
| GAGAGGTTGAAGAGAAAGAA+AGG | - | chr3_4:76719933-76719952 | Msa0523380:CDS | 40.0% | |
| GAAGAGAAAGAAAGGAGTCA+CGG | - | chr3_4:76719941-76719960 | Msa0523380:CDS | 40.0% | |
| !! | CTTGGTGTTACTGTTGAATC+TGG | - | chr3_4:76720023-76720042 | Msa0523380:intron | 40.0% |
| ATGCTTCTAAGCATGTACCT+TGG | + | chr3_4:76720128-76720147 | None:intergenic | 40.0% | |
| ! | CATGCTTAGAAGCATGACTA+AGG | - | chr3_4:76720133-76720152 | Msa0523380:CDS | 40.0% |
| AATAAGAAACCTCCTCTAGC+TGG | - | chr3_4:76720158-76720177 | Msa0523380:CDS | 40.0% | |
| TCAAATCTTGAACCAGCTAG+AGG | + | chr3_4:76720173-76720192 | None:intergenic | 40.0% | |
| ! | ACTGTTGGTGAGAAGAAAGT+TGG | - | chr3_4:76720203-76720222 | Msa0523380:CDS | 40.0% |
| GCAATGTGTGACTGAAAATG+CGG | + | chr3_4:76719463-76719482 | None:intergenic | 40.0% | |
| CAGGTTCTTTAACCAAGTCT+CGG | - | chr3_4:76719712-76719731 | Msa0523380:CDS | 40.0% | |
| TTTAACCAAGTCTCGGAAAC+TGG | - | chr3_4:76719719-76719738 | Msa0523380:CDS | 40.0% | |
| CCATTAATTTCTTCCGGATC+TGG | + | chr3_4:76719834-76719853 | None:intergenic | 40.0% | |
| CCAGATCCGGAAGAAATTAA+TGG | - | chr3_4:76719831-76719850 | Msa0523380:CDS | 40.0% | |
| ATTCTGCAAAAAGGAACGAG+AGG | - | chr3_4:76719916-76719935 | Msa0523380:CDS | 40.0% | |
| GAGAGGTTGAAGAGAAAGAA+AGG | - | chr3_4:76719933-76719952 | Msa0523380:CDS | 40.0% | |
| GAAGAGAAAGAAAGGAGTCA+CGG | - | chr3_4:76719941-76719960 | Msa0523380:CDS | 40.0% | |
| !! | CTTGGTGTTACTGTTGAATC+TGG | - | chr3_4:76720023-76720042 | Msa0523380:intron | 40.0% |
| ATGCTTCTAAGCATGTACCT+TGG | + | chr3_4:76720128-76720147 | None:intergenic | 40.0% | |
| ! | CATGCTTAGAAGCATGACTA+AGG | - | chr3_4:76720133-76720152 | Msa0523380:CDS | 40.0% |
| AATAAGAAACCTCCTCTAGC+TGG | - | chr3_4:76720158-76720177 | Msa0523380:CDS | 40.0% | |
| TCAAATCTTGAACCAGCTAG+AGG | + | chr3_4:76720173-76720192 | None:intergenic | 40.0% | |
| ! | ACTGTTGGTGAGAAGAAAGT+TGG | - | chr3_4:76720203-76720222 | Msa0523380:CDS | 40.0% |
| AATCCACAACATCAGCCGTT+TGG | - | chr3_4:76719344-76719363 | Msa0523380:three_prime_UTR | 45.0% | |
| ATTGTGGCAAAGAGTAGCGA+GGG | + | chr3_4:76719424-76719443 | None:intergenic | 45.0% | |
| AAGAGAGGGAGAGTCAAGAA+CGG | + | chr3_4:76719575-76719594 | None:intergenic | 45.0% | |
| TTGAACCAGTTTCCGAGACT+TGG | + | chr3_4:76719727-76719746 | None:intergenic | 45.0% | |
| GAAGCAATTGTGCGGTATTC+AGG | + | chr3_4:76719765-76719784 | None:intergenic | 45.0% | |
| CGAGTTTGGAAAACCAGATC+CGG | - | chr3_4:76719818-76719837 | Msa0523380:CDS | 45.0% | |
| TCTGGTGTTCTGTTTCAGAG+AGG | - | chr3_4:76719876-76719895 | Msa0523380:CDS | 45.0% | |
| ! | TTCTGCTGCTTATTCTGCTG+AGG | - | chr3_4:76720091-76720110 | Msa0523380:intron | 45.0% |
| CTGAGGTTAGTGAAACTCCA+AGG | - | chr3_4:76720108-76720127 | Msa0523380:CDS | 45.0% | |
| AATCTTGAACCAGCTAGAGG+AGG | + | chr3_4:76720170-76720189 | None:intergenic | 45.0% | |
| AATCCACAACATCAGCCGTT+TGG | - | chr3_4:76719344-76719363 | Msa0523380:three_prime_UTR | 45.0% | |
| ATTGTGGCAAAGAGTAGCGA+GGG | + | chr3_4:76719424-76719443 | None:intergenic | 45.0% | |
| AAGAGAGGGAGAGTCAAGAA+CGG | + | chr3_4:76719575-76719594 | None:intergenic | 45.0% | |
| TTGAACCAGTTTCCGAGACT+TGG | + | chr3_4:76719727-76719746 | None:intergenic | 45.0% | |
| GAAGCAATTGTGCGGTATTC+AGG | + | chr3_4:76719765-76719784 | None:intergenic | 45.0% | |
| CGAGTTTGGAAAACCAGATC+CGG | - | chr3_4:76719818-76719837 | Msa0523380:CDS | 45.0% | |
| TCTGGTGTTCTGTTTCAGAG+AGG | - | chr3_4:76719876-76719895 | Msa0523380:CDS | 45.0% | |
| ! | TTCTGCTGCTTATTCTGCTG+AGG | - | chr3_4:76720091-76720110 | Msa0523380:intron | 45.0% |
| CTGAGGTTAGTGAAACTCCA+AGG | - | chr3_4:76720108-76720127 | Msa0523380:CDS | 45.0% | |
| AATCTTGAACCAGCTAGAGG+AGG | + | chr3_4:76720170-76720189 | None:intergenic | 45.0% | |
| GATCCAAACGGCTGATGTTG+TGG | + | chr3_4:76719350-76719369 | None:intergenic | 50.0% | |
| GTAGCGAGGGTTTGAGTCAA+AGG | + | chr3_4:76719411-76719430 | None:intergenic | 50.0% | |
| GATTGTGGCAAAGAGTAGCG+AGG | + | chr3_4:76719425-76719444 | None:intergenic | 50.0% | |
| TGTGACTGAAAATGCGGTGC+GGG | + | chr3_4:76719457-76719476 | None:intergenic | 50.0% | |
| GTGTGACTGAAAATGCGGTG+CGG | + | chr3_4:76719458-76719477 | None:intergenic | 50.0% | |
| GAAGACGCATCGGAGACTTA+GGG | + | chr3_4:76719543-76719562 | None:intergenic | 50.0% | |
| ! | GTTCGAGTTCGAAGACGCAT+CGG | + | chr3_4:76719553-76719572 | None:intergenic | 50.0% |
| CCTGGTGGAGTTTGAAGAGA+GGG | + | chr3_4:76719589-76719608 | None:intergenic | 50.0% | |
| ACCTGGTGGAGTTTGAAGAG+AGG | + | chr3_4:76719590-76719609 | None:intergenic | 50.0% | |
| CGGTATTCAGGTCGTAGTTC+AGG | + | chr3_4:76719753-76719772 | None:intergenic | 50.0% | |
| AGGATGGTTCGTGACGAGTT+TGG | - | chr3_4:76719804-76719823 | Msa0523380:CDS | 50.0% | |
| GAGAAAGAAAGGAGTCACGG+TGG | - | chr3_4:76719944-76719963 | Msa0523380:CDS | 50.0% | |
| !! | GTTGGAGCATCGAGAAGAGT+AGG | - | chr3_4:76720221-76720240 | Msa0523380:exon | 50.0% |
| GATCCAAACGGCTGATGTTG+TGG | + | chr3_4:76719350-76719369 | None:intergenic | 50.0% | |
| GTAGCGAGGGTTTGAGTCAA+AGG | + | chr3_4:76719411-76719430 | None:intergenic | 50.0% | |
| GATTGTGGCAAAGAGTAGCG+AGG | + | chr3_4:76719425-76719444 | None:intergenic | 50.0% | |
| TGTGACTGAAAATGCGGTGC+GGG | + | chr3_4:76719457-76719476 | None:intergenic | 50.0% | |
| GTGTGACTGAAAATGCGGTG+CGG | + | chr3_4:76719458-76719477 | None:intergenic | 50.0% | |
| GAAGACGCATCGGAGACTTA+GGG | + | chr3_4:76719543-76719562 | None:intergenic | 50.0% | |
| ! | GTTCGAGTTCGAAGACGCAT+CGG | + | chr3_4:76719553-76719572 | None:intergenic | 50.0% |
| CCTGGTGGAGTTTGAAGAGA+GGG | + | chr3_4:76719589-76719608 | None:intergenic | 50.0% | |
| ACCTGGTGGAGTTTGAAGAG+AGG | + | chr3_4:76719590-76719609 | None:intergenic | 50.0% | |
| CGGTATTCAGGTCGTAGTTC+AGG | + | chr3_4:76719753-76719772 | None:intergenic | 50.0% | |
| AGGATGGTTCGTGACGAGTT+TGG | - | chr3_4:76719804-76719823 | Msa0523380:CDS | 50.0% | |
| GAGAAAGAAAGGAGTCACGG+TGG | - | chr3_4:76719944-76719963 | Msa0523380:CDS | 50.0% | |
| !! | GTTGGAGCATCGAGAAGAGT+AGG | - | chr3_4:76720221-76720240 | Msa0523380:exon | 50.0% |
| TGGTCGGAGGTGGGATTTCA+TGG | + | chr3_4:76719509-76719528 | None:intergenic | 55.0% | |
| CGCATCGGAGACTTAGGGAT+CGG | + | chr3_4:76719538-76719557 | None:intergenic | 55.0% | |
| CGAAGACGCATCGGAGACTT+AGG | + | chr3_4:76719544-76719563 | None:intergenic | 55.0% | |
| CCCTCTCTTCAAACTCCACC+AGG | - | chr3_4:76719586-76719605 | Msa0523380:CDS | 55.0% | |
| TGGTCGGAGGTGGGATTTCA+TGG | + | chr3_4:76719509-76719528 | None:intergenic | 55.0% | |
| CGCATCGGAGACTTAGGGAT+CGG | + | chr3_4:76719538-76719557 | None:intergenic | 55.0% | |
| CGAAGACGCATCGGAGACTT+AGG | + | chr3_4:76719544-76719563 | None:intergenic | 55.0% | |
| CCCTCTCTTCAAACTCCACC+AGG | - | chr3_4:76719586-76719605 | Msa0523380:CDS | 55.0% | |
| GGAGACTTAGGGATCGGTCG+CGG | + | chr3_4:76719532-76719551 | None:intergenic | 60.0% | |
| GGAGACTTAGGGATCGGTCG+CGG | + | chr3_4:76719532-76719551 | None:intergenic | 60.0% | |
| TAGGGATCGGTCGCGGTGGT+CGG | + | chr3_4:76719525-76719544 | None:intergenic | 65.0% | |
| GACTTAGGGATCGGTCGCGG+TGG | + | chr3_4:76719529-76719548 | None:intergenic | 65.0% | |
| TAGGGATCGGTCGCGGTGGT+CGG | + | chr3_4:76719525-76719544 | None:intergenic | 65.0% | |
| GACTTAGGGATCGGTCGCGG+TGG | + | chr3_4:76719529-76719548 | None:intergenic | 65.0% | |
| CGGTCGCGGTGGTCGGAGGT+GGG | + | chr3_4:76719518-76719537 | None:intergenic | 75.0% | |
| TCGGTCGCGGTGGTCGGAGG+TGG | + | chr3_4:76719519-76719538 | None:intergenic | 75.0% | |
| GGATCGGTCGCGGTGGTCGG+AGG | + | chr3_4:76719522-76719541 | None:intergenic | 75.0% | |
| CGGTCGCGGTGGTCGGAGGT+GGG | + | chr3_4:76719518-76719537 | None:intergenic | 75.0% | |
| TCGGTCGCGGTGGTCGGAGG+TGG | + | chr3_4:76719519-76719538 | None:intergenic | 75.0% | |
| GGATCGGTCGCGGTGGTCGG+AGG | + | chr3_4:76719522-76719541 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76719318 | 76720394 | 76719318 | ID=Msa0523380;Name=Msa0523380 |
| chr3_4 | mRNA | 76719318 | 76720394 | 76719318 | ID=Msa0523380-mRNA-1;Parent=Msa0523380;Name=Msa0523380-mRNA-1;_AED=0.01;_eAED=0.01;_QI=169|1|1|1|1|1|2|132|222 |
| chr3_4 | exon | 76719318 | 76719997 | 76719318 | ID=Msa0523380-mRNA-1:exon:22394;Parent=Msa0523380-mRNA-1 |
| chr3_4 | exon | 76720105 | 76720394 | 76720105 | ID=Msa0523380-mRNA-1:exon:22393;Parent=Msa0523380-mRNA-1 |
| chr3_4 | five_prime_UTR | 76720226 | 76720394 | 76720226 | ID=Msa0523380-mRNA-1:five_prime_utr;Parent=Msa0523380-mRNA-1 |
| chr3_4 | CDS | 76720105 | 76720225 | 76720105 | ID=Msa0523380-mRNA-1:cds;Parent=Msa0523380-mRNA-1 |
| chr3_4 | CDS | 76719450 | 76719997 | 76719450 | ID=Msa0523380-mRNA-1:cds;Parent=Msa0523380-mRNA-1 |
| chr3_4 | three_prime_UTR | 76719318 | 76719449 | 76719318 | ID=Msa0523380-mRNA-1:three_prime_utr;Parent=Msa0523380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
