Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061970 | XP_003623208.1 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 3.41e-155 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061970 | sp|P32110|GSTX6_SOYBN | 77.434 | 226 | 49 | 2 | 1 | 225 | 1 | 225 | 5.90e-125 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061970 | G7L6I2 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 1.63e-155 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000820 | Msa1061970 | 0.815938 | 7.153586e-52 | -8.615850e-47 |
| Msa0037760 | Msa1061970 | 0.810067 | 1.385929e-50 | -8.615850e-47 |
| Msa0051480 | Msa1061970 | 0.833764 | 4.422382e-56 | -8.615850e-47 |
| Msa0052780 | Msa1061970 | 0.819584 | 1.075436e-52 | -8.615850e-47 |
| Msa0097570 | Msa1061970 | 0.816631 | 5.005134e-52 | -8.615850e-47 |
| Msa0606340 | Msa1061970 | -0.802838 | 4.638584e-49 | -8.615850e-47 |
| Msa0611060 | Msa1061970 | 0.847966 | 8.273824e-60 | -8.615850e-47 |
| Msa0615200 | Msa1061970 | 0.811931 | 5.469679e-51 | -8.615850e-47 |
| Msa0631130 | Msa1061970 | 0.801303 | 9.596650e-49 | -8.615850e-47 |
| Msa0636320 | Msa1061970 | 0.800714 | 1.266217e-48 | -8.615850e-47 |
| Msa0657340 | Msa1061970 | 0.822902 | 1.847107e-53 | -8.615850e-47 |
| Msa0669350 | Msa1061970 | 0.803325 | 3.678928e-49 | -8.615850e-47 |
| Msa0698280 | Msa1061970 | 0.823968 | 1.040948e-53 | -8.615850e-47 |
| Msa0701430 | Msa1061970 | 0.829156 | 6.026983e-55 | -8.615850e-47 |
| Msa0704560 | Msa1061970 | 0.807060 | 6.077912e-50 | -8.615850e-47 |
| Msa0731580 | Msa1061970 | 0.800438 | 1.441543e-48 | -8.615850e-47 |
| Msa0744540 | Msa1061970 | 0.817525 | 3.152080e-52 | -8.615850e-47 |
| Msa0744550 | Msa1061970 | 0.814773 | 1.298578e-51 | -8.615850e-47 |
| Msa0744560 | Msa1061970 | 0.823021 | 1.733150e-53 | -8.615850e-47 |
| Msa0793270 | Msa1061970 | 0.826629 | 2.442084e-54 | -8.615850e-47 |
| Msa0795320 | Msa1061970 | 0.806865 | 6.683989e-50 | -8.615850e-47 |
| Msa0826240 | Msa1061970 | 0.801902 | 7.232339e-49 | -8.615850e-47 |
| Msa0826370 | Msa1061970 | 0.802045 | 6.757435e-49 | -8.615850e-47 |
| Msa0826380 | Msa1061970 | 0.807843 | 4.145587e-50 | -8.615850e-47 |
| Msa0129640 | Msa1061970 | 0.816750 | 4.706594e-52 | -8.615850e-47 |
| Msa0143640 | Msa1061970 | 0.819013 | 1.451432e-52 | -8.615850e-47 |
| Msa0145430 | Msa1061970 | 0.821621 | 3.663455e-53 | -8.615850e-47 |
| Msa0146200 | Msa1061970 | 0.832911 | 7.212587e-56 | -8.615850e-47 |
| Msa0150620 | Msa1061970 | 0.821872 | 3.203875e-53 | -8.615850e-47 |
| Msa0153860 | Msa1061970 | 0.812324 | 4.490318e-51 | -8.615850e-47 |
| Msa0174950 | Msa1061970 | 0.800684 | 1.284025e-48 | -8.615850e-47 |
| Msa0186240 | Msa1061970 | 0.833095 | 6.491295e-56 | -8.615850e-47 |
| Msa0203090 | Msa1061970 | 0.805846 | 1.096075e-49 | -8.615850e-47 |
| Msa0224210 | Msa1061970 | 0.801985 | 6.952692e-49 | -8.615850e-47 |
| Msa0238710 | Msa1061970 | 0.861817 | 7.856984e-64 | -8.615850e-47 |
| Msa0366810 | Msa1061970 | 0.802928 | 4.445767e-49 | -8.615850e-47 |
| Msa0383900 | Msa1061970 | 0.803842 | 2.874293e-49 | -8.615850e-47 |
| Msa0390170 | Msa1061970 | 0.807395 | 5.161984e-50 | -8.615850e-47 |
| Msa0390790 | Msa1061970 | 0.808038 | 3.768421e-50 | -8.615850e-47 |
| Msa0393100 | Msa1061970 | 0.864430 | 1.223256e-64 | -8.615850e-47 |
| Msa0400010 | Msa1061970 | 0.805097 | 1.573480e-49 | -8.615850e-47 |
| Msa0402800 | Msa1061970 | 0.862581 | 4.578748e-64 | -8.615850e-47 |
| Msa0405200 | Msa1061970 | 0.801584 | 8.406295e-49 | -8.615850e-47 |
| Msa0434300 | Msa1061970 | 0.830620 | 2.650384e-55 | -8.615850e-47 |
| Msa0434400 | Msa1061970 | 0.826248 | 3.010041e-54 | -8.615850e-47 |
| Msa0438070 | Msa1061970 | 0.830668 | 2.579407e-55 | -8.615850e-47 |
| Msa0443450 | Msa1061970 | 0.837688 | 4.485590e-57 | -8.615850e-47 |
| Msa0449500 | Msa1061970 | 0.802066 | 6.691586e-49 | -8.615850e-47 |
| Msa0449620 | Msa1061970 | 0.823359 | 1.445178e-53 | -8.615850e-47 |
| Msa0478080 | Msa1061970 | 0.826526 | 2.584357e-54 | -8.615850e-47 |
| Msa0480530 | Msa1061970 | 0.818256 | 2.155678e-52 | -8.615850e-47 |
| Msa0480540 | Msa1061970 | 0.817323 | 3.500171e-52 | -8.615850e-47 |
| Msa0480550 | Msa1061970 | 0.822634 | 2.132609e-53 | -8.615850e-47 |
| Msa1001120 | Msa1061970 | 0.803006 | 4.282382e-49 | -8.615850e-47 |
| Msa1003920 | Msa1061970 | 0.805256 | 1.457365e-49 | -8.615850e-47 |
| Msa1025750 | Msa1061970 | 0.800913 | 1.153222e-48 | -8.615850e-47 |
| Msa1030210 | Msa1061970 | 0.817853 | 2.657900e-52 | -8.615850e-47 |
| Msa1035050 | Msa1061970 | 0.813564 | 2.401062e-51 | -8.615850e-47 |
| Msa1041250 | Msa1061970 | 0.827775 | 1.298222e-54 | -8.615850e-47 |
| Msa1058200 | Msa1061970 | 0.813258 | 2.804196e-51 | -8.615850e-47 |
| Msa1061970 | Msa1062060 | 0.822245 | 2.625737e-53 | -8.615850e-47 |
| Msa1061970 | Msa1069250 | 0.835131 | 2.005609e-56 | -8.615850e-47 |
| Msa1061970 | Msa1075090 | 0.831953 | 1.245895e-55 | -8.615850e-47 |
| Msa1061970 | Msa1077970 | 0.808740 | 2.669599e-50 | -8.615850e-47 |
| Msa1061970 | Msa1095590 | 0.807980 | 3.876856e-50 | -8.615850e-47 |
| Msa1061970 | Msa1107220 | 0.800248 | 1.575300e-48 | -8.615850e-47 |
| Msa1061970 | Msa1107230 | 0.801747 | 7.781919e-49 | -8.615850e-47 |
| Msa1061970 | Msa1111860 | 0.817483 | 3.221964e-52 | -8.615850e-47 |
| Msa1061970 | Msa1115980 | 0.808541 | 2.944696e-50 | -8.615850e-47 |
| Msa1061970 | Msa1120580 | 0.814694 | 1.352490e-51 | -8.615850e-47 |
| Msa1061970 | Msa1137750 | 0.805620 | 1.222785e-49 | -8.615850e-47 |
| Msa1061970 | Msa1150760 | 0.821841 | 3.258119e-53 | -8.615850e-47 |
| Msa1061970 | Msa1150920 | 0.825149 | 5.487984e-54 | -8.615850e-47 |
| Msa1061970 | Msa1157110 | 0.817467 | 3.249147e-52 | -8.615850e-47 |
| Msa1061970 | Msa1162430 | 0.825917 | 3.608302e-54 | -8.615850e-47 |
| Msa1061970 | Msa1173150 | 0.819441 | 1.159862e-52 | -8.615850e-47 |
| Msa1061970 | Msa1174280 | 0.833075 | 6.567597e-56 | -8.615850e-47 |
| Msa1061970 | Msa1185270 | 0.814007 | 1.918315e-51 | -8.615850e-47 |
| Msa1061970 | Msa1202110 | 0.851927 | 6.452324e-61 | -8.615850e-47 |
| Msa1061970 | Msa1203810 | 0.842799 | 2.073186e-58 | -8.615850e-47 |
| Msa1061970 | Msa1211610 | 0.830612 | 2.662450e-55 | -8.615850e-47 |
| Msa1061970 | Msa1212470 | 0.807339 | 5.305338e-50 | -8.615850e-47 |
| Msa1061970 | Msa1217260 | 0.827205 | 1.779567e-54 | -8.615850e-47 |
| Msa1061970 | Msa1221220 | 0.825890 | 3.662156e-54 | -8.615850e-47 |
| Msa1061970 | Msa1239210 | 0.807596 | 4.678183e-50 | -8.615850e-47 |
| Msa1061970 | Msa1254870 | 0.849607 | 2.901476e-60 | -8.615850e-47 |
| Msa1061970 | Msa1281300 | 0.804554 | 2.043178e-49 | -8.615850e-47 |
| Msa1061970 | Msa1299480 | 0.830857 | 2.318742e-55 | -8.615850e-47 |
| Msa1061970 | Msa1322180 | 0.800798 | 1.216943e-48 | -8.615850e-47 |
| Msa1061970 | Msa1328430 | 0.850832 | 1.315775e-60 | -8.615850e-47 |
| Msa1061970 | Msa1329900 | 0.801354 | 9.369995e-49 | -8.615850e-47 |
| Msa1061970 | Msa1330400 | 0.800601 | 1.334977e-48 | -8.615850e-47 |
| Msa1061970 | Msa1357570 | 0.810382 | 1.185079e-50 | -8.615850e-47 |
| Msa1061970 | Msa1366480 | 0.805681 | 1.187082e-49 | -8.615850e-47 |
| Msa1061970 | Msa1369320 | 0.810911 | 9.106423e-51 | -8.615850e-47 |
| Msa1061970 | Msa1377050 | 0.812047 | 5.161214e-51 | -8.615850e-47 |
| Msa1061970 | Msa1398120 | 0.805334 | 1.403312e-49 | -8.615850e-47 |
| Msa1061970 | Msa1401110 | 0.819576 | 1.080361e-52 | -8.615850e-47 |
| Msa1061970 | Msa1412410 | 0.819956 | 8.843736e-53 | -8.615850e-47 |
| Msa1061970 | Msa1413800 | 0.832892 | 7.291498e-56 | -8.615850e-47 |
| Msa1061970 | Msa1422230 | 0.835635 | 1.496115e-56 | -8.615850e-47 |
| Msa1061970 | Msa1427000 | 0.821731 | 3.454124e-53 | -8.615850e-47 |
| Msa1061970 | Msa1427860 | 0.825779 | 3.891771e-54 | -8.615850e-47 |
| Msa1061970 | Msa1436090 | 0.830771 | 2.433640e-55 | -8.615850e-47 |
| Msa1061970 | Msa1438160 | 0.805306 | 1.422857e-49 | -8.615850e-47 |
| Msa1061970 | Msa1439780 | 0.807222 | 5.616621e-50 | -8.615850e-47 |
| Msa1061970 | Msa1459920 | 0.813693 | 2.249470e-51 | -8.615850e-47 |
| Msa0242720 | Msa1061970 | 0.804854 | 1.768427e-49 | -8.615850e-47 |
| Msa0246140 | Msa1061970 | 0.858930 | 5.873155e-63 | -8.615850e-47 |
| Msa0265480 | Msa1061970 | 0.807241 | 5.565001e-50 | -8.615850e-47 |
| Msa0267700 | Msa1061970 | 0.813219 | 2.860074e-51 | -8.615850e-47 |
| Msa0302510 | Msa1061970 | 0.800482 | 1.411478e-48 | -8.615850e-47 |
| Msa0306310 | Msa1061970 | 0.801904 | 7.225143e-49 | -8.615850e-47 |
| Msa0316470 | Msa1061970 | 0.817941 | 2.539023e-52 | -8.615850e-47 |
| Msa0319680 | Msa1061970 | 0.837266 | 5.753118e-57 | -8.615850e-47 |
| Msa0324810 | Msa1061970 | 0.800410 | 1.460375e-48 | -8.615850e-47 |
| Msa0332360 | Msa1061970 | 0.828812 | 7.300518e-55 | -8.615850e-47 |
| Msa0340370 | Msa1061970 | 0.813294 | 2.753224e-51 | -8.615850e-47 |
| Msa0345980 | Msa1061970 | 0.812154 | 4.890933e-51 | -8.615850e-47 |
| Msa0356580 | Msa1061970 | 0.838017 | 3.690857e-57 | -8.615850e-47 |
| Msa0488580 | Msa1061970 | 0.846906 | 1.617968e-59 | -8.615850e-47 |
| Msa0493870 | Msa1061970 | 0.815385 | 9.498032e-52 | -8.615850e-47 |
| Msa0497680 | Msa1061970 | 0.808637 | 2.807923e-50 | -8.615850e-47 |
| Msa0497690 | Msa1061970 | 0.829474 | 5.045080e-55 | -8.615850e-47 |
| Msa0497860 | Msa1061970 | 0.863593 | 2.227966e-64 | -8.615850e-47 |
| Msa0522140 | Msa1061970 | 0.829259 | 5.690049e-55 | -8.615850e-47 |
| Msa0522170 | Msa1061970 | 0.832815 | 7.620254e-56 | -8.615850e-47 |
| Msa0534610 | Msa1061970 | 0.810523 | 1.104793e-50 | -8.615850e-47 |
| Msa0565180 | Msa1061970 | 0.821504 | 3.897421e-53 | -8.615850e-47 |
| Msa0580840 | Msa1061970 | 0.819314 | 1.239562e-52 | -8.615850e-47 |
| Msa0590810 | Msa1061970 | 0.819794 | 9.630980e-53 | -8.615850e-47 |
| Msa0865810 | Msa1061970 | 0.804379 | 2.222053e-49 | -8.615850e-47 |
| Msa0865820 | Msa1061970 | 0.814002 | 1.923390e-51 | -8.615850e-47 |
| Msa0873940 | Msa1061970 | 0.809006 | 2.341717e-50 | -8.615850e-47 |
| Msa0874640 | Msa1061970 | 0.823813 | 1.131774e-53 | -8.615850e-47 |
| Msa0966580 | Msa1061970 | 0.807293 | 5.426378e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061970 | MtrunA17_Chr7g0240681 | 96.000 | 225 | 9 | 0 | 1 | 225 | 1 | 225 | 3.14e-159 | 439 |
| Msa1061970 | MtrunA17_Chr7g0240631 | 78.125 | 224 | 48 | 1 | 1 | 224 | 1 | 223 | 2.78e-129 | 363 |
| Msa1061970 | MtrunA17_Chr7g0240641 | 77.232 | 224 | 50 | 1 | 1 | 224 | 1 | 223 | 1.30e-127 | 359 |
| Msa1061970 | MtrunA17_Chr7g0240691 | 74.429 | 219 | 56 | 0 | 6 | 224 | 36 | 254 | 1.62e-120 | 342 |
| Msa1061970 | MtrunA17_Chr7g0240581 | 69.333 | 225 | 68 | 1 | 1 | 225 | 1 | 224 | 3.93e-113 | 323 |
| Msa1061970 | MtrunA17_Chr7g0240561 | 67.111 | 225 | 73 | 1 | 1 | 225 | 1 | 224 | 3.90e-111 | 318 |
| Msa1061970 | MtrunA17_Chr7g0240551 | 69.778 | 225 | 67 | 1 | 1 | 225 | 1 | 224 | 5.79e-111 | 317 |
| Msa1061970 | MtrunA17_Chr7g0240531 | 67.556 | 225 | 72 | 1 | 1 | 225 | 1 | 224 | 1.67e-105 | 303 |
| Msa1061970 | MtrunA17_Chr4g0008791 | 65.179 | 224 | 77 | 1 | 1 | 224 | 1 | 223 | 3.50e-104 | 300 |
| Msa1061970 | MtrunA17_Chr7g0240611 | 68.304 | 224 | 66 | 2 | 1 | 224 | 1 | 219 | 7.41e-104 | 299 |
| Msa1061970 | MtrunA17_Chr7g0240541 | 66.222 | 225 | 75 | 1 | 1 | 225 | 1 | 224 | 1.60e-103 | 298 |
| Msa1061970 | MtrunA17_Chr7g0240511 | 65.333 | 225 | 72 | 2 | 1 | 225 | 1 | 219 | 7.67e-100 | 289 |
| Msa1061970 | MtrunA17_Chr7g0240521 | 62.389 | 226 | 83 | 2 | 1 | 225 | 8 | 232 | 9.98e-97 | 281 |
| Msa1061970 | MtrunA17_Chr7g0240671 | 66.346 | 208 | 65 | 2 | 8 | 215 | 5 | 207 | 1.99e-96 | 280 |
| Msa1061970 | MtrunA17_Chr4g0008781 | 63.303 | 218 | 76 | 3 | 1 | 216 | 1 | 216 | 3.25e-96 | 280 |
| Msa1061970 | MtrunA17_Chr7g0240651 | 64.574 | 223 | 74 | 2 | 1 | 223 | 1 | 218 | 6.61e-90 | 264 |
| Msa1061970 | MtrunA17_Chr7g0240661 | 66.977 | 215 | 66 | 2 | 1 | 215 | 1 | 210 | 4.25e-89 | 262 |
| Msa1061970 | MtrunA17_Chr8g0379581 | 44.292 | 219 | 119 | 2 | 4 | 221 | 2 | 218 | 2.76e-66 | 204 |
| Msa1061970 | MtrunA17_Chr6g0483141 | 46.890 | 209 | 108 | 2 | 7 | 214 | 3 | 209 | 4.12e-65 | 201 |
| Msa1061970 | MtrunA17_Chr3g0132581 | 45.701 | 221 | 117 | 2 | 5 | 224 | 3 | 221 | 5.35e-65 | 201 |
| Msa1061970 | MtrunA17_Chr8g0379561 | 47.196 | 214 | 109 | 3 | 1 | 213 | 1 | 211 | 4.61e-64 | 198 |
| Msa1061970 | MtrunA17_Chr1g0196771 | 45.070 | 213 | 111 | 4 | 6 | 215 | 2 | 211 | 3.44e-61 | 191 |
| Msa1061970 | MtrunA17_Chr1g0212301 | 45.972 | 211 | 112 | 1 | 7 | 215 | 3 | 213 | 2.28e-60 | 189 |
| Msa1061970 | MtrunA17_Chr1g0196691 | 46.188 | 223 | 112 | 4 | 7 | 224 | 28 | 247 | 2.27e-59 | 187 |
| Msa1061970 | MtrunA17_Chr4g0029341 | 44.393 | 214 | 114 | 2 | 6 | 216 | 3 | 214 | 2.54e-55 | 176 |
| Msa1061970 | MtrunA17_Chr1g0196661 | 43.750 | 224 | 117 | 3 | 7 | 225 | 3 | 222 | 2.88e-55 | 176 |
| Msa1061970 | MtrunA17_Chr5g0415411 | 44.344 | 221 | 112 | 4 | 1 | 213 | 1 | 218 | 6.03e-54 | 172 |
| Msa1061970 | MtrunA17_Chr1g0196711 | 44.762 | 210 | 111 | 2 | 7 | 213 | 3 | 210 | 1.50e-53 | 171 |
| Msa1061970 | MtrunA17_Chr1g0196721 | 44.091 | 220 | 118 | 3 | 8 | 224 | 3 | 220 | 1.76e-53 | 171 |
| Msa1061970 | MtrunA17_Chr5g0417011 | 40.807 | 223 | 123 | 3 | 1 | 216 | 1 | 221 | 5.15e-53 | 170 |
| Msa1061970 | MtrunA17_Chr8g0363751 | 42.727 | 220 | 117 | 4 | 5 | 216 | 3 | 221 | 1.77e-49 | 161 |
| Msa1061970 | MtrunA17_Chr2g0312771 | 41.706 | 211 | 115 | 5 | 6 | 213 | 3 | 208 | 1.27e-47 | 156 |
| Msa1061970 | MtrunA17_Chr2g0312751 | 40.566 | 212 | 118 | 5 | 6 | 214 | 3 | 209 | 9.18e-47 | 154 |
| Msa1061970 | MtrunA17_Chr2g0312791 | 41.951 | 205 | 114 | 4 | 6 | 208 | 3 | 204 | 2.44e-46 | 153 |
| Msa1061970 | MtrunA17_Chr2g0312781 | 40.000 | 210 | 120 | 4 | 1 | 208 | 15 | 220 | 9.53e-46 | 152 |
| Msa1061970 | MtrunA17_Chr2g0312731 | 40.976 | 205 | 115 | 4 | 6 | 208 | 3 | 203 | 7.98e-45 | 149 |
| Msa1061970 | MtrunA17_Chr3g0107731 | 40.865 | 208 | 117 | 4 | 8 | 213 | 10 | 213 | 9.92e-45 | 149 |
| Msa1061970 | MtrunA17_Chr2g0312721 | 42.029 | 207 | 114 | 5 | 6 | 210 | 3 | 205 | 1.10e-44 | 149 |
| Msa1061970 | MtrunA17_Chr3g0107741 | 40.094 | 212 | 121 | 5 | 4 | 213 | 6 | 213 | 4.04e-44 | 147 |
| Msa1061970 | MtrunA17_Chr4g0069471 | 44.503 | 191 | 93 | 6 | 3 | 188 | 21 | 203 | 1.81e-43 | 145 |
| Msa1061970 | MtrunA17_Chr2g0312811 | 39.623 | 212 | 120 | 5 | 6 | 213 | 3 | 210 | 7.87e-43 | 144 |
| Msa1061970 | MtrunA17_Chr8g0357211 | 40.000 | 210 | 120 | 4 | 6 | 213 | 3 | 208 | 4.66e-42 | 142 |
| Msa1061970 | MtrunA17_Chr8g0357241 | 43.915 | 189 | 100 | 4 | 6 | 192 | 3 | 187 | 7.82e-42 | 141 |
| Msa1061970 | MtrunA17_Chr2g0312681 | 35.885 | 209 | 128 | 5 | 7 | 213 | 4 | 208 | 1.88e-39 | 135 |
| Msa1061970 | MtrunA17_Chr5g0433801 | 37.559 | 213 | 127 | 5 | 3 | 213 | 2 | 210 | 2.41e-39 | 135 |
| Msa1061970 | MtrunA17_Chr2g0312691 | 36.406 | 217 | 132 | 4 | 7 | 221 | 4 | 216 | 6.29e-39 | 134 |
| Msa1061970 | MtrunA17_Chr8g0391631 | 45.399 | 163 | 78 | 5 | 1 | 154 | 15 | 175 | 4.47e-38 | 130 |
| Msa1061970 | MtrunA17_Chr2g0312711 | 38.278 | 209 | 122 | 5 | 7 | 213 | 4 | 207 | 5.90e-37 | 129 |
| Msa1061970 | MtrunA17_Chr2g0313561 | 49.153 | 59 | 29 | 1 | 51 | 108 | 2 | 60 | 3.39e-14 | 65.5 |
| Msa1061970 | MtrunA17_Chr5g0415421 | 45.205 | 73 | 37 | 1 | 31 | 100 | 11 | 83 | 1.34e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061970 | AT3G09270.1 | 50.667 | 225 | 105 | 5 | 4 | 224 | 2 | 224 | 1.05e-75 | 228 |
| Msa1061970 | AT2G29420.1 | 49.545 | 220 | 108 | 2 | 3 | 221 | 5 | 222 | 2.41e-74 | 225 |
| Msa1061970 | AT2G29490.1 | 48.095 | 210 | 105 | 3 | 1 | 208 | 1 | 208 | 4.47e-60 | 188 |
| Msa1061970 | AT2G29480.1 | 45.714 | 210 | 110 | 3 | 1 | 208 | 1 | 208 | 4.58e-56 | 178 |
| Msa1061970 | AT2G29460.1 | 43.049 | 223 | 123 | 3 | 1 | 221 | 1 | 221 | 7.73e-55 | 175 |
| Msa1061970 | AT1G10370.1 | 45.192 | 208 | 106 | 3 | 5 | 205 | 3 | 209 | 2.20e-54 | 174 |
| Msa1061970 | AT2G29450.1 | 47.115 | 208 | 107 | 3 | 3 | 208 | 2 | 208 | 2.61e-54 | 174 |
| Msa1061970 | AT2G29440.1 | 46.190 | 210 | 108 | 4 | 1 | 208 | 1 | 207 | 2.42e-53 | 171 |
| Msa1061970 | AT2G29470.1 | 43.602 | 211 | 114 | 4 | 1 | 208 | 1 | 209 | 4.97e-53 | 171 |
| Msa1061970 | AT1G59700.1 | 46.890 | 209 | 102 | 5 | 5 | 205 | 4 | 211 | 3.92e-52 | 168 |
| Msa1061970 | AT1G27130.1 | 41.593 | 226 | 122 | 5 | 1 | 218 | 1 | 224 | 1.99e-51 | 166 |
| Msa1061970 | AT1G59670.1 | 44.019 | 209 | 108 | 4 | 5 | 205 | 4 | 211 | 5.90e-51 | 165 |
| Msa1061970 | AT1G10360.1 | 41.981 | 212 | 113 | 4 | 1 | 205 | 1 | 209 | 2.03e-50 | 164 |
| Msa1061970 | AT1G69930.1 | 39.111 | 225 | 130 | 3 | 2 | 220 | 7 | 230 | 1.50e-48 | 159 |
| Msa1061970 | AT1G78340.1 | 42.381 | 210 | 115 | 4 | 6 | 213 | 3 | 208 | 4.79e-48 | 157 |
| Msa1061970 | AT1G53680.1 | 38.967 | 213 | 126 | 3 | 1 | 211 | 1 | 211 | 8.43e-47 | 154 |
| Msa1061970 | AT1G78370.1 | 40.291 | 206 | 117 | 4 | 10 | 213 | 7 | 208 | 9.74e-47 | 154 |
| Msa1061970 | AT1G69920.1 | 40.465 | 215 | 117 | 5 | 1 | 205 | 26 | 239 | 1.37e-46 | 155 |
| Msa1061970 | AT1G17170.1 | 39.908 | 218 | 124 | 4 | 6 | 221 | 3 | 215 | 5.03e-46 | 152 |
| Msa1061970 | AT1G78380.1 | 42.647 | 204 | 111 | 4 | 7 | 208 | 4 | 203 | 5.52e-46 | 152 |
| Msa1061970 | AT1G78320.1 | 40.930 | 215 | 121 | 5 | 5 | 217 | 2 | 212 | 6.75e-46 | 152 |
| Msa1061970 | AT1G27140.1 | 38.961 | 231 | 130 | 5 | 1 | 222 | 1 | 229 | 7.65e-45 | 150 |
| Msa1061970 | AT5G62480.1 | 38.288 | 222 | 125 | 4 | 5 | 216 | 6 | 225 | 7.88e-44 | 147 |
| Msa1061970 | AT1G17180.1 | 40.000 | 210 | 120 | 5 | 6 | 213 | 3 | 208 | 1.05e-42 | 144 |
| Msa1061970 | AT1G78360.1 | 40.000 | 210 | 119 | 5 | 7 | 213 | 4 | 209 | 3.88e-41 | 140 |
| Msa1061970 | AT3G43800.1 | 38.462 | 208 | 118 | 6 | 4 | 205 | 2 | 205 | 6.22e-39 | 134 |
| Msa1061970 | AT1G74590.1 | 33.628 | 226 | 140 | 4 | 1 | 219 | 1 | 223 | 2.10e-38 | 133 |
| Msa1061970 | AT1G17190.1 | 37.674 | 215 | 126 | 5 | 1 | 213 | 1 | 209 | 3.43e-36 | 127 |
| Msa1061970 | AT1G78320.2 | 34.579 | 214 | 109 | 5 | 5 | 217 | 2 | 185 | 9.48e-32 | 115 |
| Msa1061970 | AT5G62480.2 | 30.769 | 221 | 117 | 4 | 5 | 216 | 6 | 199 | 3.65e-28 | 106 |
| Msa1061970 | AT5G62480.3 | 30.317 | 221 | 117 | 4 | 5 | 216 | 6 | 198 | 2.44e-27 | 104 |
Find 38 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTCCACTTGGAAAGTT+TGG | 0.246363 | 7_2:-52463466 | None:intergenic |
| AAAGAGCCTTGGCTAGATTT+TGG | 0.274128 | 7_2:+52462909 | Msa1061970:CDS |
| AATCACAAGTGATTCTGATA+TGG | 0.275550 | 7_2:-52462828 | None:intergenic |
| GAGCTGAAGGACAAGTTCTT+TGG | 0.294063 | 7_2:+52463336 | Msa1061970:CDS |
| AAAATCTAGCCAAGGCTCTT+TGG | 0.322049 | 7_2:-52462907 | None:intergenic |
| TGGCTCCACTTGGAAAGTTT+GGG | 0.342035 | 7_2:-52463465 | None:intergenic |
| TTGGATGGTTGAGAAATTCT+TGG | 0.345416 | 7_2:-52463485 | None:intergenic |
| TCTCAACCATCCAATTGTTA+AGG | 0.377126 | 7_2:+52463494 | Msa1061970:CDS |
| CCTTTGATTCAAGACATAAC+AGG | 0.388085 | 7_2:+52463414 | Msa1061970:CDS |
| TTCTTTGGAGGAGAGGAGAT+TGG | 0.390435 | 7_2:+52463351 | Msa1061970:CDS |
| GTGAAGCTATTGGGAGCTAT+AGG | 0.394371 | 7_2:+52462653 | Msa1061970:CDS |
| TGCTTCAATGGCTACAAATC+AGG | 0.399394 | 7_2:+52462625 | None:intergenic |
| CAGGAAGAAGTGAAGCTATT+GGG | 0.411817 | 7_2:+52462644 | Msa1061970:CDS |
| TCAGGAAGAAGTGAAGCTAT+TGG | 0.415262 | 7_2:+52462643 | Msa1061970:CDS |
| ATCTGTACTCTACACACAAA+TGG | 0.424561 | 7_2:-52462680 | None:intergenic |
| ACAGATTGCTCTAAAGTTGA+AGG | 0.449931 | 7_2:+52462697 | Msa1061970:CDS |
| ATCACAAGTGATTCTGATAT+GGG | 0.450253 | 7_2:-52462827 | None:intergenic |
| AGGAGAGGAGATTGGAATTG+TGG | 0.454908 | 7_2:+52463359 | Msa1061970:CDS |
| GAGAAATTCTTGGCTCCACT+TGG | 0.459712 | 7_2:-52463475 | None:intergenic |
| GCTCTTTGGTATGGATCATA+AGG | 0.477384 | 7_2:-52462893 | None:intergenic |
| CTAGCCAAGGCTCTTTGGTA+TGG | 0.477671 | 7_2:-52462902 | None:intergenic |
| CTGAAGGACAAGTTCTTTGG+AGG | 0.491967 | 7_2:+52463339 | Msa1061970:CDS |
| CCTGTTATGTCTTGAATCAA+AGG | 0.497589 | 7_2:-52463414 | None:intergenic |
| TCTGTACTCTACACACAAAT+GGG | 0.504085 | 7_2:-52462679 | None:intergenic |
| GAGCGCGAGAAGAATATTGA+AGG | 0.504203 | 7_2:+52463282 | Msa1061970:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7_2:+52462852 | Msa1061970:CDS |
| TATAAACTGGGTTATACTTG+AGG | 0.528468 | 7_2:-52462772 | None:intergenic |
| CAAATTTCTTGAAGAAAACA+TGG | 0.532285 | 7_2:+52462730 | Msa1061970:CDS |
| GGACAAGTTCTTTGGAGGAG+AGG | 0.532885 | 7_2:+52463344 | Msa1061970:CDS |
| CTTTGATTCAAGACATAACA+GGG | 0.541148 | 7_2:+52463415 | Msa1061970:CDS |
| CTGTTATGTCTTGAATCAAA+GGG | 0.548966 | 7_2:-52463413 | None:intergenic |
| GAATATTGAAGGAACAATTG+AGG | 0.577684 | 7_2:+52463293 | Msa1061970:CDS |
| TGATCCATACCAAAGAGCCT+TGG | 0.577800 | 7_2:+52462898 | Msa1061970:CDS |
| GATTCTTGAGAATGAGCTGA+AGG | 0.588727 | 7_2:+52463323 | Msa1061970:CDS |
| CAGATTGCTCTAAAGTTGAA+GGG | 0.593796 | 7_2:+52462698 | Msa1061970:CDS |
| GTCTAACTTCATCGACGACA+AGG | 0.594451 | 7_2:+52462931 | Msa1061970:CDS |
| GTTAGACCAAAATCTAGCCA+AGG | 0.639426 | 7_2:-52462915 | None:intergenic |
| AGTGTCCCAAACTTTCCAAG+TGG | 0.647650 | 7_2:+52463460 | Msa1061970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CAAATTTCTTGAAGAAAACA+TGG | + | chr7_2:52462730-52462749 | Msa1061970:CDS | 25.0% |
| !! | CTGGAATCTTTTTATAAACT+GGG | - | chr7_2:52462787-52462806 | None:intergenic | 25.0% |
| !! | ACTGGAATCTTTTTATAAAC+TGG | - | chr7_2:52462788-52462807 | None:intergenic | 25.0% |
| !! | TTTTCATTGTGAACAAAAAC+TGG | - | chr7_2:52462806-52462825 | None:intergenic | 25.0% |
| ! | AATACATCATATGTGATTGT+TGG | - | chr7_2:52463064-52463083 | None:intergenic | 25.0% |
| ! | AATTTACATCTTTGATGTCA+CGG | + | chr7_2:52463150-52463169 | Msa1061970:intron | 25.0% |
| !! | ATTTACATTAGAAAAGTACG+CGG | - | chr7_2:52463188-52463207 | None:intergenic | 25.0% |
| !! | TATTTTCCTTAACAATTGGA+TGG | - | chr7_2:52463503-52463522 | None:intergenic | 25.0% |
| ! | CAAATTTCTTGAAGAAAACA+TGG | + | chr7_2:52462730-52462749 | Msa1061970:CDS | 25.0% |
| !! | CTGGAATCTTTTTATAAACT+GGG | - | chr7_2:52462787-52462806 | None:intergenic | 25.0% |
| !! | ACTGGAATCTTTTTATAAAC+TGG | - | chr7_2:52462788-52462807 | None:intergenic | 25.0% |
| !! | TTTTCATTGTGAACAAAAAC+TGG | - | chr7_2:52462806-52462825 | None:intergenic | 25.0% |
| ! | AATACATCATATGTGATTGT+TGG | - | chr7_2:52463064-52463083 | None:intergenic | 25.0% |
| ! | AATTTACATCTTTGATGTCA+CGG | + | chr7_2:52463150-52463169 | Msa1061970:intron | 25.0% |
| !! | ATTTACATTAGAAAAGTACG+CGG | - | chr7_2:52463188-52463207 | None:intergenic | 25.0% |
| !! | TATTTTCCTTAACAATTGGA+TGG | - | chr7_2:52463503-52463522 | None:intergenic | 25.0% |
| TATAAACTGGGTTATACTTG+AGG | - | chr7_2:52462775-52462794 | None:intergenic | 30.0% | |
| ATCACAAGTGATTCTGATAT+GGG | - | chr7_2:52462830-52462849 | None:intergenic | 30.0% | |
| AATCACAAGTGATTCTGATA+TGG | - | chr7_2:52462831-52462850 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | + | chr7_2:52462852-52462871 | Msa1061970:CDS | 30.0% | |
| ATTACATCATACGTGATTGA+TGG | + | chr7_2:52463011-52463030 | Msa1061970:intron | 30.0% | |
| GAATATTGAAGGAACAATTG+AGG | + | chr7_2:52463293-52463312 | Msa1061970:CDS | 30.0% | |
| CTGTTATGTCTTGAATCAAA+GGG | - | chr7_2:52463416-52463435 | None:intergenic | 30.0% | |
| CTTTGATTCAAGACATAACA+GGG | + | chr7_2:52463415-52463434 | Msa1061970:CDS | 30.0% | |
| ! | GGCATATTTTCCTTAACAAT+TGG | - | chr7_2:52463507-52463526 | None:intergenic | 30.0% |
| !! | GCTTTGAAATAAGCAAAAAG+AGG | - | chr7_2:52463540-52463559 | None:intergenic | 30.0% |
| TATAAACTGGGTTATACTTG+AGG | - | chr7_2:52462775-52462794 | None:intergenic | 30.0% | |
| ATCACAAGTGATTCTGATAT+GGG | - | chr7_2:52462830-52462849 | None:intergenic | 30.0% | |
| AATCACAAGTGATTCTGATA+TGG | - | chr7_2:52462831-52462850 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | + | chr7_2:52462852-52462871 | Msa1061970:CDS | 30.0% | |
| ATTACATCATACGTGATTGA+TGG | + | chr7_2:52463011-52463030 | Msa1061970:intron | 30.0% | |
| GAATATTGAAGGAACAATTG+AGG | + | chr7_2:52463293-52463312 | Msa1061970:CDS | 30.0% | |
| CTGTTATGTCTTGAATCAAA+GGG | - | chr7_2:52463416-52463435 | None:intergenic | 30.0% | |
| CTTTGATTCAAGACATAACA+GGG | + | chr7_2:52463415-52463434 | Msa1061970:CDS | 30.0% | |
| ! | GGCATATTTTCCTTAACAAT+TGG | - | chr7_2:52463507-52463526 | None:intergenic | 30.0% |
| !! | GCTTTGAAATAAGCAAAAAG+AGG | - | chr7_2:52463540-52463559 | None:intergenic | 30.0% |
| TCTGTACTCTACACACAAAT+GGG | - | chr7_2:52462682-52462701 | None:intergenic | 35.0% | |
| ATCTGTACTCTACACACAAA+TGG | - | chr7_2:52462683-52462702 | None:intergenic | 35.0% | |
| !! | ACAGATTGCTCTAAAGTTGA+AGG | + | chr7_2:52462697-52462716 | Msa1061970:CDS | 35.0% |
| !! | CAGATTGCTCTAAAGTTGAA+GGG | + | chr7_2:52462698-52462717 | Msa1061970:CDS | 35.0% |
| CCTGTTATGTCTTGAATCAA+AGG | - | chr7_2:52463417-52463436 | None:intergenic | 35.0% | |
| CCTTTGATTCAAGACATAAC+AGG | + | chr7_2:52463414-52463433 | Msa1061970:CDS | 35.0% | |
| TTGGATGGTTGAGAAATTCT+TGG | - | chr7_2:52463488-52463507 | None:intergenic | 35.0% | |
| TCTCAACCATCCAATTGTTA+AGG | + | chr7_2:52463494-52463513 | Msa1061970:CDS | 35.0% | |
| TAAGCAAAAAGAGGTTCTCT+AGG | - | chr7_2:52463531-52463550 | None:intergenic | 35.0% | |
| TCTGTACTCTACACACAAAT+GGG | - | chr7_2:52462682-52462701 | None:intergenic | 35.0% | |
| ATCTGTACTCTACACACAAA+TGG | - | chr7_2:52462683-52462702 | None:intergenic | 35.0% | |
| !! | ACAGATTGCTCTAAAGTTGA+AGG | + | chr7_2:52462697-52462716 | Msa1061970:CDS | 35.0% |
| !! | CAGATTGCTCTAAAGTTGAA+GGG | + | chr7_2:52462698-52462717 | Msa1061970:CDS | 35.0% |
| CCTGTTATGTCTTGAATCAA+AGG | - | chr7_2:52463417-52463436 | None:intergenic | 35.0% | |
| CCTTTGATTCAAGACATAAC+AGG | + | chr7_2:52463414-52463433 | Msa1061970:CDS | 35.0% | |
| TTGGATGGTTGAGAAATTCT+TGG | - | chr7_2:52463488-52463507 | None:intergenic | 35.0% | |
| TCTCAACCATCCAATTGTTA+AGG | + | chr7_2:52463494-52463513 | Msa1061970:CDS | 35.0% | |
| TAAGCAAAAAGAGGTTCTCT+AGG | - | chr7_2:52463531-52463550 | None:intergenic | 35.0% | |
| TCAGGAAGAAGTGAAGCTAT+TGG | + | chr7_2:52462643-52462662 | Msa1061970:CDS | 40.0% | |
| CAGGAAGAAGTGAAGCTATT+GGG | + | chr7_2:52462644-52462663 | Msa1061970:CDS | 40.0% | |
| !! | GAGGAGAAGTTCACTTTTGT+TGG | - | chr7_2:52462756-52462775 | None:intergenic | 40.0% |
| GCTCTTTGGTATGGATCATA+AGG | - | chr7_2:52462896-52462915 | None:intergenic | 40.0% | |
| AAAATCTAGCCAAGGCTCTT+TGG | - | chr7_2:52462910-52462929 | None:intergenic | 40.0% | |
| ! | AAAGAGCCTTGGCTAGATTT+TGG | + | chr7_2:52462909-52462928 | Msa1061970:CDS | 40.0% |
| GTTAGACCAAAATCTAGCCA+AGG | - | chr7_2:52462918-52462937 | None:intergenic | 40.0% | |
| GATTCTTGAGAATGAGCTGA+AGG | + | chr7_2:52463323-52463342 | Msa1061970:CDS | 40.0% | |
| ! | CAGCTGTCTACATAGCTTTT+TGG | + | chr7_2:52463388-52463407 | Msa1061970:CDS | 40.0% |
| TCAGGAAGAAGTGAAGCTAT+TGG | + | chr7_2:52462643-52462662 | Msa1061970:CDS | 40.0% | |
| CAGGAAGAAGTGAAGCTATT+GGG | + | chr7_2:52462644-52462663 | Msa1061970:CDS | 40.0% | |
| !! | GAGGAGAAGTTCACTTTTGT+TGG | - | chr7_2:52462756-52462775 | None:intergenic | 40.0% |
| GCTCTTTGGTATGGATCATA+AGG | - | chr7_2:52462896-52462915 | None:intergenic | 40.0% | |
| AAAATCTAGCCAAGGCTCTT+TGG | - | chr7_2:52462910-52462929 | None:intergenic | 40.0% | |
| ! | AAAGAGCCTTGGCTAGATTT+TGG | + | chr7_2:52462909-52462928 | Msa1061970:CDS | 40.0% |
| GTTAGACCAAAATCTAGCCA+AGG | - | chr7_2:52462918-52462937 | None:intergenic | 40.0% | |
| GATTCTTGAGAATGAGCTGA+AGG | + | chr7_2:52463323-52463342 | Msa1061970:CDS | 40.0% | |
| ! | CAGCTGTCTACATAGCTTTT+TGG | + | chr7_2:52463388-52463407 | Msa1061970:CDS | 40.0% |
| GTGAAGCTATTGGGAGCTAT+AGG | + | chr7_2:52462653-52462672 | Msa1061970:CDS | 45.0% | |
| TGATCCATACCAAAGAGCCT+TGG | + | chr7_2:52462898-52462917 | Msa1061970:CDS | 45.0% | |
| GTCTAACTTCATCGACGACA+AGG | + | chr7_2:52462931-52462950 | Msa1061970:CDS | 45.0% | |
| GAGCGCGAGAAGAATATTGA+AGG | + | chr7_2:52463282-52463301 | Msa1061970:CDS | 45.0% | |
| GAGCTGAAGGACAAGTTCTT+TGG | + | chr7_2:52463336-52463355 | Msa1061970:CDS | 45.0% | |
| CTGAAGGACAAGTTCTTTGG+AGG | + | chr7_2:52463339-52463358 | Msa1061970:CDS | 45.0% | |
| ! | TTCTTTGGAGGAGAGGAGAT+TGG | + | chr7_2:52463351-52463370 | Msa1061970:CDS | 45.0% |
| AGGAGAGGAGATTGGAATTG+TGG | + | chr7_2:52463359-52463378 | Msa1061970:CDS | 45.0% | |
| AGTGTCCCAAACTTTCCAAG+TGG | + | chr7_2:52463460-52463479 | Msa1061970:CDS | 45.0% | |
| TGGCTCCACTTGGAAAGTTT+GGG | - | chr7_2:52463468-52463487 | None:intergenic | 45.0% | |
| TTGGCTCCACTTGGAAAGTT+TGG | - | chr7_2:52463469-52463488 | None:intergenic | 45.0% | |
| GAGAAATTCTTGGCTCCACT+TGG | - | chr7_2:52463478-52463497 | None:intergenic | 45.0% | |
| GCAAAAAGAGGTTCTCTAGG+AGG | - | chr7_2:52463528-52463547 | None:intergenic | 45.0% | |
| GTGAAGCTATTGGGAGCTAT+AGG | + | chr7_2:52462653-52462672 | Msa1061970:CDS | 45.0% | |
| TGATCCATACCAAAGAGCCT+TGG | + | chr7_2:52462898-52462917 | Msa1061970:CDS | 45.0% | |
| GTCTAACTTCATCGACGACA+AGG | + | chr7_2:52462931-52462950 | Msa1061970:CDS | 45.0% | |
| GAGCGCGAGAAGAATATTGA+AGG | + | chr7_2:52463282-52463301 | Msa1061970:CDS | 45.0% | |
| GAGCTGAAGGACAAGTTCTT+TGG | + | chr7_2:52463336-52463355 | Msa1061970:CDS | 45.0% | |
| CTGAAGGACAAGTTCTTTGG+AGG | + | chr7_2:52463339-52463358 | Msa1061970:CDS | 45.0% | |
| ! | TTCTTTGGAGGAGAGGAGAT+TGG | + | chr7_2:52463351-52463370 | Msa1061970:CDS | 45.0% |
| AGGAGAGGAGATTGGAATTG+TGG | + | chr7_2:52463359-52463378 | Msa1061970:CDS | 45.0% | |
| AGTGTCCCAAACTTTCCAAG+TGG | + | chr7_2:52463460-52463479 | Msa1061970:CDS | 45.0% | |
| TGGCTCCACTTGGAAAGTTT+GGG | - | chr7_2:52463468-52463487 | None:intergenic | 45.0% | |
| TTGGCTCCACTTGGAAAGTT+TGG | - | chr7_2:52463469-52463488 | None:intergenic | 45.0% | |
| GAGAAATTCTTGGCTCCACT+TGG | - | chr7_2:52463478-52463497 | None:intergenic | 45.0% | |
| GCAAAAAGAGGTTCTCTAGG+AGG | - | chr7_2:52463528-52463547 | None:intergenic | 45.0% | |
| CTAGCCAAGGCTCTTTGGTA+TGG | - | chr7_2:52462905-52462924 | None:intergenic | 50.0% | |
| ! | GGACAAGTTCTTTGGAGGAG+AGG | + | chr7_2:52463344-52463363 | Msa1061970:CDS | 50.0% |
| CTAGCCAAGGCTCTTTGGTA+TGG | - | chr7_2:52462905-52462924 | None:intergenic | 50.0% | |
| ! | GGACAAGTTCTTTGGAGGAG+AGG | + | chr7_2:52463344-52463363 | Msa1061970:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 52462632 | 52463590 | 52462632 | ID=Msa1061970;Name=Msa1061970 |
| chr7_2 | mRNA | 52462632 | 52463590 | 52462632 | ID=Msa1061970-mRNA-1;Parent=Msa1061970;Name=Msa1061970-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|2|0|225 |
| chr7_2 | exon | 52462632 | 52462952 | 52462632 | ID=Msa1061970-mRNA-1:exon:9473;Parent=Msa1061970-mRNA-1 |
| chr7_2 | exon | 52463234 | 52463590 | 52463234 | ID=Msa1061970-mRNA-1:exon:9474;Parent=Msa1061970-mRNA-1 |
| chr7_2 | CDS | 52462632 | 52462952 | 52462632 | ID=Msa1061970-mRNA-1:cds;Parent=Msa1061970-mRNA-1 |
| chr7_2 | CDS | 52463234 | 52463590 | 52463234 | ID=Msa1061970-mRNA-1:cds;Parent=Msa1061970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
