Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94814.t1 | RHN79957.1 | 95.6 | 366 | 14 | 1 | 1 | 364 | 101 | 466 | 9.30E-194 | 686 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94814.t1 | P32143 | 24.1 | 345 | 194 | 7 | 13 | 352 | 4 | 285 | 2.4e-12 | 74.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94814.t1 | A0A072VM08 | 95.6 | 366 | 14 | 1 | 1 | 364 | 127 | 492 | 6.7e-194 | 686.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene94814 | 0.829826 | 4.14E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene94814 | 0.873631 | 1.27E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene94814 | 0.834226 | 3.39E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene94814 | 0.880527 | 5.10E-70 | -1.69E-46 |
| MS.gene049222 | MS.gene94814 | 0.891584 | 3.48E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene94814 | 0.826865 | 2.15E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene94814 | 0.898495 | 5.02E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene94814 | 0.881246 | 2.82E-70 | -1.69E-46 |
| MS.gene04939 | MS.gene94814 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene94814 | 0.8393 | 1.72E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene94814 | 0.868176 | 7.93E-66 | -1.69E-46 |
| MS.gene049627 | MS.gene94814 | 0.854451 | 1.22E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene94814 | 0.833345 | 5.63E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene94814 | 0.863403 | 2.55E-64 | -1.69E-46 |
| MS.gene05010 | MS.gene94814 | 0.830265 | 3.24E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene94814 | 0.9002 | 9.30E-78 | -1.69E-46 |
| MS.gene050165 | MS.gene94814 | 0.883307 | 5.01E-71 | -1.69E-46 |
| MS.gene050323 | MS.gene94814 | 0.802274 | 6.06E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene94814 | 0.871575 | 6.15E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene94814 | 0.877163 | 7.84E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene94814 | 0.898272 | 6.24E-77 | -1.69E-46 |
| MS.gene050538 | MS.gene94814 | 0.827773 | 1.30E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene94814 | 0.847864 | 8.83E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene94814 | 0.827547 | 1.47E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene94814 | 0.869973 | 2.07E-66 | -1.69E-46 |
| MS.gene050662 | MS.gene94814 | 0.800422 | 1.45E-48 | -1.69E-46 |
| MS.gene050675 | MS.gene94814 | 0.84845 | 6.08E-60 | -1.69E-46 |
| MS.gene050690 | MS.gene94814 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene94814 | 0.885884 | 5.53E-72 | -1.69E-46 |
| MS.gene050747 | MS.gene94814 | 0.877075 | 8.41E-69 | -1.69E-46 |
| MS.gene050770 | MS.gene94814 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene94814 | 0.890199 | 1.22E-73 | -1.69E-46 |
| MS.gene05080 | MS.gene94814 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene050876 | MS.gene94814 | 0.823182 | 1.59E-53 | -1.69E-46 |
| MS.gene05087 | MS.gene94814 | 0.801919 | 7.18E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene94814 | 0.87259 | 2.83E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene94814 | 0.860645 | 1.79E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene94814 | 0.863026 | 3.34E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene94814 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene051317 | MS.gene94814 | 0.82418 | 9.28E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene94814 | 0.825755 | 3.94E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene94814 | 0.847136 | 1.40E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene94814 | 0.833018 | 6.79E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene94814 | 0.853321 | 2.58E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene94814 | 0.85919 | 4.91E-63 | -1.69E-46 |
| MS.gene051858 | MS.gene94814 | 0.852738 | 3.79E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene94814 | 0.831823 | 1.34E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene94814 | 0.854654 | 1.07E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene94814 | 0.845823 | 3.19E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene94814 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene052482 | MS.gene94814 | 0.823363 | 1.44E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene94814 | 0.839895 | 1.21E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene94814 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene94814 | 0.801524 | 8.64E-49 | -1.69E-46 |
| MS.gene052605 | MS.gene94814 | 0.801831 | 7.48E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene94814 | 0.875934 | 2.08E-68 | -1.69E-46 |
| MS.gene052670 | MS.gene94814 | 0.850118 | 2.09E-60 | -1.69E-46 |
| MS.gene052822 | MS.gene94814 | 0.808594 | 2.87E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene94814 | 0.812874 | 3.40E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene94814 | 0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene94814 | 0.832967 | 6.99E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene94814 | 0.812053 | 5.15E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene94814 | 0.827033 | 1.96E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene94814 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene94814 | 0.837255 | 5.79E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene94814 | 0.87498 | 4.42E-68 | -1.69E-46 |
| MS.gene053213 | MS.gene94814 | 0.903431 | 3.49E-79 | -1.69E-46 |
| MS.gene053286 | MS.gene94814 | 0.900127 | 1.00E-77 | -1.69E-46 |
| MS.gene053322 | MS.gene94814 | 0.854367 | 1.29E-61 | -1.69E-46 |
| MS.gene053436 | MS.gene94814 | 0.825286 | 5.09E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene94814 | 0.861766 | 8.14E-64 | -1.69E-46 |
| MS.gene053579 | MS.gene94814 | 0.811567 | 6.56E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene94814 | 0.835537 | 1.58E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene94814 | 0.883899 | 3.03E-71 | -1.69E-46 |
| MS.gene053824 | MS.gene94814 | 0.823758 | 1.17E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene94814 | 0.806963 | 6.37E-50 | -1.69E-46 |
| MS.gene054374 | MS.gene94814 | 0.809798 | 1.58E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene94814 | 0.851638 | 7.79E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene94814 | 0.851912 | 6.52E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene94814 | 0.874742 | 5.32E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene94814 | 0.897927 | 8.74E-77 | -1.69E-46 |
| MS.gene05470 | MS.gene94814 | 0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene94814 | 0.838903 | 2.18E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene94814 | 0.881411 | 2.46E-70 | -1.69E-46 |
| MS.gene05505 | MS.gene94814 | 0.823667 | 1.22E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene94814 | 0.848065 | 7.77E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene94814 | 0.883971 | 2.86E-71 | -1.69E-46 |
| MS.gene055397 | MS.gene94814 | 0.816651 | 4.95E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene94814 | 0.850341 | 1.81E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene94814 | 0.891837 | 2.76E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene94814 | 0.867227 | 1.60E-65 | -1.69E-46 |
| MS.gene055634 | MS.gene94814 | 0.80217 | 6.37E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene94814 | 0.82172 | 3.48E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene94814 | 0.832398 | 9.67E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene94814 | 0.856797 | 2.52E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene94814 | 0.866575 | 2.58E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene94814 | 0.812999 | 3.20E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene94814 | 0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene94814 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene94814 | 0.819723 | 1.00E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene94814 | 0.835759 | 1.39E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene94814 | 0.857335 | 1.75E-62 | -1.69E-46 |
| MS.gene056374 | MS.gene94814 | 0.869454 | 3.06E-66 | -1.69E-46 |
| MS.gene056409 | MS.gene94814 | 0.811542 | 6.65E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene94814 | 0.803139 | 4.02E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene94814 | 0.819284 | 1.26E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene94814 | 0.875963 | 2.03E-68 | -1.69E-46 |
| MS.gene056549 | MS.gene94814 | 0.822234 | 2.64E-53 | -1.69E-46 |
| MS.gene056550 | MS.gene94814 | -0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene94814 | 0.836846 | 7.37E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene94814 | 0.89253 | 1.46E-74 | -1.69E-46 |
| MS.gene056692 | MS.gene94814 | 0.853777 | 1.91E-61 | -1.69E-46 |
| MS.gene057011 | MS.gene94814 | 0.838748 | 2.39E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene94814 | 0.818294 | 2.11E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene94814 | 0.862261 | 5.74E-64 | -1.69E-46 |
| MS.gene057146 | MS.gene94814 | 0.83877 | 2.36E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene94814 | 0.834576 | 2.77E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene94814 | 0.897694 | 1.10E-76 | -1.69E-46 |
| MS.gene057658 | MS.gene94814 | 0.81669 | 4.85E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene94814 | 0.873677 | 1.22E-67 | -1.69E-46 |
| MS.gene058019 | MS.gene94814 | 0.842194 | 3.00E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene94814 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene94814 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene94814 | 0.804061 | 2.59E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene94814 | 0.839131 | 1.90E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene94814 | 0.900853 | 4.83E-78 | -1.69E-46 |
| MS.gene058544 | MS.gene94814 | 0.877571 | 5.65E-69 | -1.69E-46 |
| MS.gene058719 | MS.gene94814 | 0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene94814 | 0.826725 | 2.32E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene94814 | 0.883294 | 5.07E-71 | -1.69E-46 |
| MS.gene058838 | MS.gene94814 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene94814 | 0.84659 | 1.97E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene94814 | 0.874557 | 6.15E-68 | -1.69E-46 |
| MS.gene059023 | MS.gene94814 | 0.861845 | 7.70E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene94814 | 0.9043 | 1.42E-79 | -1.69E-46 |
| MS.gene05913 | MS.gene94814 | 0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene94814 | 0.835897 | 1.28E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene94814 | 0.848727 | 5.10E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene94814 | 0.898396 | 5.53E-77 | -1.69E-46 |
| MS.gene059718 | MS.gene94814 | 0.89964 | 1.62E-77 | -1.69E-46 |
| MS.gene059756 | MS.gene94814 | 0.8745 | 6.43E-68 | -1.69E-46 |
| MS.gene059801 | MS.gene94814 | 0.834152 | 3.54E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene94814 | 0.837712 | 4.42E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene94814 | 0.848816 | 4.81E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene94814 | 0.857991 | 1.12E-62 | -1.69E-46 |
| MS.gene060482 | MS.gene94814 | 0.810247 | 1.27E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene94814 | 0.833212 | 6.07E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene94814 | 0.847032 | 1.49E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene94814 | 0.854901 | 9.04E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene94814 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene94814 | 0.800334 | 1.51E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene94814 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene94814 | 0.879206 | 1.51E-69 | -1.69E-46 |
| MS.gene060982 | MS.gene94814 | 0.823614 | 1.26E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene94814 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene94814 | 0.882788 | 7.77E-71 | -1.69E-46 |
| MS.gene061171 | MS.gene94814 | 0.863223 | 2.90E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene94814 | 0.87384 | 1.08E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94814.t1 | MTR_1g069320 | 95.628 | 366 | 14 | 1 | 1 | 364 | 127 | 492 | 0.0 | 711 |
| MS.gene94814.t1 | MTR_7g099270 | 72.802 | 364 | 99 | 0 | 1 | 364 | 1 | 364 | 0.0 | 563 |
| MS.gene94814.t1 | MTR_7g099280 | 65.922 | 358 | 122 | 0 | 6 | 363 | 53 | 410 | 1.40e-177 | 499 |
| MS.gene94814.t1 | MTR_7g099280 | 65.922 | 358 | 122 | 0 | 6 | 363 | 51 | 408 | 1.60e-177 | 499 |
| MS.gene94814.t1 | MTR_1g069325 | 65.278 | 360 | 125 | 0 | 5 | 364 | 9 | 368 | 4.31e-176 | 494 |
| MS.gene94814.t1 | MTR_7g099280 | 64.263 | 319 | 114 | 0 | 6 | 324 | 51 | 369 | 7.08e-152 | 432 |
| MS.gene94814.t1 | MTR_7g099280 | 58.380 | 358 | 112 | 1 | 6 | 363 | 61 | 381 | 4.43e-147 | 421 |
| MS.gene94814.t1 | MTR_1g069325 | 56.389 | 360 | 106 | 1 | 5 | 364 | 9 | 317 | 9.59e-141 | 402 |
| MS.gene94814.t1 | MTR_7g099280 | 65.299 | 268 | 93 | 0 | 6 | 273 | 51 | 318 | 6.04e-126 | 366 |
| MS.gene94814.t1 | MTR_7g099280 | 65.116 | 258 | 90 | 0 | 6 | 263 | 51 | 308 | 2.22e-121 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94814.t1 | AT4G28706 | 67.042 | 355 | 117 | 0 | 9 | 363 | 46 | 400 | 0.0 | 513 |
| MS.gene94814.t1 | AT4G28706 | 67.042 | 355 | 117 | 0 | 9 | 363 | 48 | 402 | 0.0 | 512 |
| MS.gene94814.t1 | AT4G28706 | 67.135 | 356 | 116 | 1 | 9 | 363 | 48 | 403 | 0.0 | 511 |
| MS.gene94814.t1 | AT4G28706 | 67.135 | 356 | 116 | 1 | 9 | 363 | 48 | 403 | 0.0 | 511 |
| MS.gene94814.t1 | AT5G43910 | 54.396 | 364 | 160 | 3 | 2 | 363 | 4 | 363 | 2.42e-140 | 403 |
| MS.gene94814.t1 | AT5G43910 | 54.658 | 322 | 140 | 3 | 2 | 321 | 4 | 321 | 3.29e-122 | 355 |
| MS.gene94814.t1 | AT5G43910 | 53.957 | 278 | 126 | 2 | 2 | 277 | 4 | 281 | 5.52e-105 | 310 |
| MS.gene94814.t1 | AT5G43910 | 54.745 | 274 | 122 | 2 | 2 | 273 | 4 | 277 | 9.27e-105 | 310 |
| MS.gene94814.t1 | AT5G43910 | 54.745 | 274 | 122 | 2 | 2 | 273 | 4 | 277 | 1.17e-104 | 309 |
Find 102 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACGTTGGGTAACCTTAAA+AGG | 0.186047 | 1.4:+55837552 | None:intergenic |
| AAAATTTGTGGCTGTAACTT+TGG | 0.249227 | 1.4:-55837531 | MS.gene94814:CDS |
| ATCAGTCACCGTCGATTTCT+TGG | 0.299106 | 1.4:-55841263 | MS.gene94814:CDS |
| GGTGCCGGGGATGCATTTAT+TGG | 0.310291 | 1.4:-55836742 | MS.gene94814:CDS |
| CCAGTCAGTGGCAAAATTAA+AGG | 0.324818 | 1.4:-55836848 | MS.gene94814:intron |
| GGTGGATGTAGACAACTTAT+TGG | 0.326212 | 1.4:-55837359 | MS.gene94814:CDS |
| CAACATAATCAGCTAATTTC+AGG | 0.326463 | 1.4:+55838130 | None:intergenic |
| TTAACCTGCCTTGCTCGTTT+AGG | 0.328379 | 1.4:-55840839 | MS.gene94814:CDS |
| AAACACAAGGCTCGTTTCTA+AGG | 0.332845 | 1.4:-55840813 | MS.gene94814:intron |
| AACTCGATTCTGAAAGATCT+TGG | 0.350613 | 1.4:+55838992 | None:intergenic |
| CTGGAAAATCTACTGAATAA+AGG | 0.358595 | 1.4:+55836207 | None:intergenic |
| AAATTTGTGGCTGTAACTTT+GGG | 0.365260 | 1.4:-55837530 | MS.gene94814:CDS |
| TTTATTGGATCTGTGATCTA+TGG | 0.367712 | 1.4:-55836727 | MS.gene94814:intron |
| TCATCTAATATGCCCCTGCC+TGG | 0.371108 | 1.4:+55840369 | None:intergenic |
| GAAGGAATAGGAACGGTTAT+CGG | 0.380834 | 1.4:-55836823 | MS.gene94814:CDS |
| ACTCGATTCTGAAAGATCTT+GGG | 0.390681 | 1.4:+55838993 | None:intergenic |
| GAAAGATCTTGGGGTATCAT+TGG | 0.390891 | 1.4:+55839003 | None:intergenic |
| AATCAGAACAACCGCTTTGA+AGG | 0.391087 | 1.4:-55841206 | MS.gene94814:intron |
| ATCGAGTTTGTTATCTGCAT+TGG | 0.395357 | 1.4:-55838977 | MS.gene94814:CDS |
| CCTTTCTGCATCAATTAAGA+TGG | 0.396655 | 1.4:+55838176 | None:intergenic |
| GGTGCCAAGTGCAGAGATCT+AGG | 0.414691 | 1.4:-55836274 | MS.gene94814:CDS |
| AAGGCAGGTTAAAGCATTGC+CGG | 0.419139 | 1.4:+55840850 | None:intergenic |
| CGCACAACGGTGGCGCTTTG+AGG | 0.441473 | 1.4:+55841378 | None:intergenic |
| GGTATCATTGGAGGATATCC+AGG | 0.445056 | 1.4:+55839015 | None:intergenic |
| AAATTAAAGGCAGAAGGAAT+AGG | 0.458558 | 1.4:-55836835 | MS.gene94814:CDS |
| GTTACCCAACGTAAAATTTG+TGG | 0.460980 | 1.4:-55837543 | MS.gene94814:CDS |
| AGGCGTGGGTCTGCGCGGTA+TGG | 0.464792 | 1.4:+55836235 | None:intergenic |
| GTGCTTATGCAGGTGGGTTG+CGG | 0.466739 | 1.4:-55841286 | MS.gene94814:intron |
| CTTGTTGATACCACTGGTGC+CGG | 0.467767 | 1.4:-55836757 | MS.gene94814:CDS |
| TCCACAATAATGTACGTAAA+CGG | 0.467777 | 1.4:+55839833 | None:intergenic |
| AAGGAATAGGAACGGTTATC+GGG | 0.482979 | 1.4:-55836822 | MS.gene94814:CDS |
| TTGCGGATGACAGCCCAGGC+AGG | 0.492500 | 1.4:-55840383 | MS.gene94814:CDS |
| TTGTTGATACCACTGGTGCC+GGG | 0.498753 | 1.4:-55836756 | MS.gene94814:CDS |
| TGCGGATGACAGCCCAGGCA+GGG | 0.505235 | 1.4:-55840382 | MS.gene94814:CDS |
| TTATTTGCAGGTATCTAAAG+AGG | 0.508769 | 1.4:-55839864 | MS.gene94814:intron |
| TAGACCTAAACGAGCAAGGC+AGG | 0.509005 | 1.4:+55840835 | None:intergenic |
| TTGCATTACTGATGATATGC+AGG | 0.509843 | 1.4:+55837294 | None:intergenic |
| GCGGAGCTTGTTGATACCAC+TGG | 0.510547 | 1.4:-55836763 | MS.gene94814:CDS |
| AGACAACTTATTGGAATCGC+TGG | 0.516469 | 1.4:-55837350 | MS.gene94814:CDS |
| GCGGATGACAGCCCAGGCAG+GGG | 0.519058 | 1.4:-55840381 | MS.gene94814:CDS |
| CATCTAATATGCCCCTGCCT+GGG | 0.522457 | 1.4:+55840370 | None:intergenic |
| TAGATTGCGGATGACAGCCC+AGG | 0.525196 | 1.4:-55840387 | MS.gene94814:CDS |
| GCAAAGGGTAGCATTGTCTC+TGG | 0.526457 | 1.4:+55836549 | None:intergenic |
| CTTTCTGCATCAATTAAGAT+GGG | 0.529991 | 1.4:+55838177 | None:intergenic |
| CTCGTTTAGGTCTAAACACA+AGG | 0.531596 | 1.4:-55840826 | MS.gene94814:CDS |
| TAATTGATGCAGAAAGGCCA+AGG | 0.534906 | 1.4:-55838170 | MS.gene94814:CDS |
| GTTCAAGGAGGTGGTAATGC+CGG | 0.539538 | 1.4:-55840869 | MS.gene94814:CDS |
| AGATCATCTAACCCTTCCCT+TGG | 0.542681 | 1.4:+55838153 | None:intergenic |
| TGCTCCTAGATCTCTGCACT+TGG | 0.543238 | 1.4:+55836270 | None:intergenic |
| AACGGTGGCGCTTTGAGGAA+CGG | 0.543705 | 1.4:+55841383 | None:intergenic |
| CGAACTTGTATACATACCCC+TGG | 0.546807 | 1.4:-55839033 | MS.gene94814:CDS |
| TCTACTGAATAAAGGACGCT+AGG | 0.547805 | 1.4:+55836215 | None:intergenic |
| ACATACCACATTAGCAGCAA+AGG | 0.549212 | 1.4:+55836533 | None:intergenic |
| AGTTTGTTATCTGCATTGGA+TGG | 0.549990 | 1.4:-55838973 | MS.gene94814:CDS |
| CTCGATTCTGAAAGATCTTG+GGG | 0.550007 | 1.4:+55838994 | None:intergenic |
| GTGGTATCAACAAGCTCCGC+GGG | 0.550095 | 1.4:+55836766 | None:intergenic |
| GGCGCTTTGAGGAACGGAGG+AGG | 0.552389 | 1.4:+55841389 | None:intergenic |
| GGAATCGCTGGAGTTAAGAA+AGG | 0.553449 | 1.4:-55837338 | MS.gene94814:CDS |
| ACCGTTTACGTACATTATTG+TGG | 0.557011 | 1.4:-55839834 | MS.gene94814:CDS |
| AGCTGAGAGCATTCCGCCCG+CGG | 0.557031 | 1.4:-55836782 | MS.gene94814:CDS |
| CCATCTTAATTGATGCAGAA+AGG | 0.560154 | 1.4:-55838176 | MS.gene94814:CDS |
| AGGATAGAAACAAGCGCTCG+CGG | 0.560505 | 1.4:+55837572 | None:intergenic |
| CATACCACATTAGCAGCAAA+GGG | 0.560550 | 1.4:+55836534 | None:intergenic |
| GCTACCCTTTGCTGCTAATG+TGG | 0.565502 | 1.4:-55836538 | MS.gene94814:intron |
| ACATCCACCTCTTCTGTGGT+AGG | 0.565690 | 1.4:+55837373 | None:intergenic |
| AGATCCAATAAATGCATCCC+CGG | 0.570608 | 1.4:+55836738 | None:intergenic |
| GTCTACATCCACCTCTTCTG+TGG | 0.570769 | 1.4:+55837369 | None:intergenic |
| TGAATAAAGGACGCTAGGCG+TGG | 0.574504 | 1.4:+55836220 | None:intergenic |
| GTGGCAAAATTAAAGGCAGA+AGG | 0.575500 | 1.4:-55836841 | MS.gene94814:CDS |
| AGATCTTGGGGTATCATTGG+AGG | 0.580008 | 1.4:+55839006 | None:intergenic |
| ATGCAGAAAGGCCAAGGGAA+GGG | 0.586552 | 1.4:-55838164 | MS.gene94814:CDS |
| AAATGCATCCCCGGCACCAG+TGG | 0.595424 | 1.4:+55836747 | None:intergenic |
| TTAGATGAGCTACGGACTGA+TGG | 0.596315 | 1.4:-55840354 | MS.gene94814:CDS |
| TGCTCTAGTTGTTGCCCACG+AGG | 0.599306 | 1.4:-55838911 | MS.gene94814:intron |
| TTTATAGGTGATAACCTCGT+GGG | 0.604370 | 1.4:+55838897 | None:intergenic |
| ATTACTGATGATATGCAGGT+TGG | 0.606173 | 1.4:+55837298 | None:intergenic |
| TGTTTAGACCTAAACGAGCA+AGG | 0.611501 | 1.4:+55840831 | None:intergenic |
| GGGGCATATTAGATGAGCTA+CGG | 0.611687 | 1.4:-55840362 | MS.gene94814:CDS |
| TATTTGCAGGTATCTAAAGA+GGG | 0.612549 | 1.4:-55839863 | MS.gene94814:intron |
| GAATAAAGGACGCTAGGCGT+GGG | 0.613508 | 1.4:+55836221 | None:intergenic |
| GATGCAGAAAGGCCAAGGGA+AGG | 0.616991 | 1.4:-55838165 | MS.gene94814:CDS |
| AGCAAGTCCTACCACAGAAG+AGG | 0.623266 | 1.4:-55837380 | MS.gene94814:CDS |
| TTGCTGACAGGCATGGACAG+AGG | 0.624956 | 1.4:-55837606 | MS.gene94814:intron |
| AAGTCCTACCACAGAAGAGG+TGG | 0.625523 | 1.4:-55837377 | MS.gene94814:CDS |
| ATGCTCAGCTAAGTTTCCAA+AGG | 0.628024 | 1.4:-55838106 | MS.gene94814:intron |
| GAGAGGGAAACGCACAACGG+TGG | 0.647307 | 1.4:+55841368 | None:intergenic |
| TGAGCTACGGACTGATGGCG+TGG | 0.655517 | 1.4:-55840349 | MS.gene94814:CDS |
| GTATCATTGGAGGATATCCA+GGG | 0.655895 | 1.4:+55839016 | None:intergenic |
| TGTTGATACCACTGGTGCCG+GGG | 0.657221 | 1.4:-55836755 | MS.gene94814:CDS |
| TGGCTTAGGATAAGCAGCAA+CGG | 0.657813 | 1.4:+55841237 | None:intergenic |
| AAAGGCAGAAGGAATAGGAA+CGG | 0.658683 | 1.4:-55836830 | MS.gene94814:CDS |
| ACGCTAGGCGTGGGTCTGCG+CGG | 0.665905 | 1.4:+55836230 | None:intergenic |
| AATTGATGCAGAAAGGCCAA+GGG | 0.667892 | 1.4:-55838169 | MS.gene94814:CDS |
| CTGCTCGAGAGAAGTGTCAG+TGG | 0.668499 | 1.4:-55837491 | MS.gene94814:intron |
| AACGGTAGCCAAGAAATCGA+CGG | 0.675256 | 1.4:+55841255 | None:intergenic |
| GTATCAACAAGCTCCGCGGG+CGG | 0.675815 | 1.4:+55836769 | None:intergenic |
| AGTGGTATCAACAAGCTCCG+CGG | 0.708001 | 1.4:+55836765 | None:intergenic |
| GGTGGCGCTTTGAGGAACGG+AGG | 0.717893 | 1.4:+55841386 | None:intergenic |
| GTTATCGGGAAACTATACAT+CGG | 0.739368 | 1.4:-55836808 | MS.gene94814:CDS |
| AAAGGAAGCAACCTTCAAAG+CGG | 0.741809 | 1.4:+55841195 | None:intergenic |
| TATCATTGGAGGATATCCAG+GGG | 0.762329 | 1.4:+55839017 | None:intergenic |
| AGAGATCTAGGAGCACGAAG+CGG | 0.771967 | 1.4:-55836262 | MS.gene94814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTAAAATGTTTATATT+TGG | - | chr1.4:55836520-55836539 | MS.gene94814:intron | 10.0% |
| !! | TTATTAGTATTAATAAAAGT+TGG | + | chr1.4:55838852-55838871 | None:intergenic | 10.0% |
| !!! | AATTATTTAGTTTTAATTTC+TGG | - | chr1.4:55836861-55836880 | MS.gene94814:intron | 10.0% |
| !!! | ATCTAAAATTCAAAAAATTA+GGG | + | chr1.4:55839883-55839902 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCAGTAAAAAAAA+TGG | + | chr1.4:55839916-55839935 | None:intergenic | 10.0% |
| !!! | TAATACTTTTTTTTTTTTTG+TGG | - | chr1.4:55837713-55837732 | MS.gene94814:intron | 10.0% |
| !!! | TATCTAAAATTCAAAAAATT+AGG | + | chr1.4:55839884-55839903 | None:intergenic | 10.0% |
| !! | AAGTATTAATAAAATAGTAG+AGG | + | chr1.4:55837701-55837720 | None:intergenic | 15.0% |
| !! | AATTCTGATGTTAATTATAA+GGG | - | chr1.4:55838748-55838767 | MS.gene94814:intron | 15.0% |
| !! | AGAATTAAAATTAATTAGTG+GGG | - | chr1.4:55837658-55837677 | MS.gene94814:intron | 15.0% |
| !! | GAGAATTAAAATTAATTAGT+GGG | - | chr1.4:55837657-55837676 | MS.gene94814:intron | 15.0% |
| !! | GTAAGAAATATATAATACTA+TGG | - | chr1.4:55839559-55839578 | MS.gene94814:intron | 15.0% |
| !!! | ATCTTACATAATTGATATTT+TGG | + | chr1.4:55840571-55840590 | None:intergenic | 15.0% |
| !!! | TAATTAATTTTAATTCTCGA+TGG | + | chr1.4:55837655-55837674 | None:intergenic | 15.0% |
| !!! | TTTGTTATATTTTTCTCTTA+TGG | - | chr1.4:55840920-55840939 | MS.gene94814:intron | 15.0% |
| !! | AATCGAAATGTAGTTAATTA+AGG | - | chr1.4:55837606-55837625 | MS.gene94814:intron | 20.0% |
| !! | ATCATGTAACAATTTCTTAT+AGG | + | chr1.4:55839132-55839151 | None:intergenic | 20.0% |
| !! | ATGTTTATTTGATAAAATCC+TGG | + | chr1.4:55838801-55838820 | None:intergenic | 20.0% |
| !! | CAATTCTGATGTTAATTATA+AGG | - | chr1.4:55838747-55838766 | MS.gene94814:intron | 20.0% |
| !! | CATAAAAAAACCTCAAAATT+TGG | + | chr1.4:55836285-55836304 | None:intergenic | 20.0% |
| !! | CGAGAATTAAAATTAATTAG+TGG | - | chr1.4:55837656-55837675 | MS.gene94814:intron | 20.0% |
| !! | GAATTGCAAGTAAAATTTAT+AGG | + | chr1.4:55838733-55838752 | None:intergenic | 20.0% |
| !! | GTATATTAAAACATAGAGAA+TGG | + | chr1.4:55840450-55840469 | None:intergenic | 20.0% |
| !!! | AAAAAGCTTATGCATTTTAA+TGG | - | chr1.4:55841303-55841322 | MS.gene94814:intron | 20.0% |
| !!! | AAAAGCTTATGCATTTTAAT+GGG | - | chr1.4:55841304-55841323 | MS.gene94814:intron | 20.0% |
| !!! | ATATTTAATTGATAACCCTT+GGG | + | chr1.4:55837577-55837596 | None:intergenic | 20.0% |
| !!! | ATTATGCATTTGTAATTTTC+AGG | - | chr1.4:55836721-55836740 | MS.gene94814:intron | 20.0% |
| !!! | TTATTTTCTTTTGCTTGTAA+AGG | - | chr1.4:55839321-55839340 | MS.gene94814:intron | 20.0% |
| !!! | TTTGATTTCTAAATATGACT+GGG | + | chr1.4:55838774-55838793 | None:intergenic | 20.0% |
| !!! | TTTTTGCATAATAAACTCAA+GGG | + | chr1.4:55839272-55839291 | None:intergenic | 20.0% |
| ! | AAAAAAACCTCAAAATTTGG+CGG | + | chr1.4:55836282-55836301 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGAACGAATGTT+AGG | + | chr1.4:55839064-55839083 | None:intergenic | 25.0% |
| ! | AAATTATACTTCGAATCAGT+TGG | + | chr1.4:55837554-55837573 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAACGAATGTTA+GGG | + | chr1.4:55839063-55839082 | None:intergenic | 25.0% |
| ! | AAGTTAGTATAGTGCATATT+TGG | - | chr1.4:55836461-55836480 | MS.gene94814:intron | 25.0% |
| ! | AATTCTTCACCAAAAACATA+AGG | + | chr1.4:55839163-55839182 | None:intergenic | 25.0% |
| ! | AATTTATGTATTGAACCTGT+TGG | - | chr1.4:55841260-55841279 | MS.gene94814:CDS | 25.0% |
| ! | ACTCATATAGGATATATTGT+AGG | + | chr1.4:55838464-55838483 | None:intergenic | 25.0% |
| ! | ACTTGAATCATTCTAAGTTA+AGG | - | chr1.4:55838148-55838167 | MS.gene94814:CDS | 25.0% |
| ! | ATATGATGTCTTAAATGACT+TGG | - | chr1.4:55839688-55839707 | MS.gene94814:intron | 25.0% |
| ! | ATCTAAATTTCAAAAGAGAG+GGG | - | chr1.4:55837873-55837892 | MS.gene94814:intron | 25.0% |
| ! | CATCATTATACACTAACATA+TGG | + | chr1.4:55841150-55841169 | None:intergenic | 25.0% |
| ! | CTTGAATCATTCTAAGTTAA+GGG | - | chr1.4:55838149-55838168 | MS.gene94814:CDS | 25.0% |
| ! | GATCTAAATTTCAAAAGAGA+GGG | - | chr1.4:55837872-55837891 | MS.gene94814:intron | 25.0% |
| ! | GTGAAGAATTTCAAAATTCT+AGG | - | chr1.4:55839173-55839192 | MS.gene94814:intron | 25.0% |
| ! | TAAATAGTACATTTATTGCC+TGG | + | chr1.4:55839657-55839676 | None:intergenic | 25.0% |
| ! | TCTAGGAAATTGAAATTACA+GGG | - | chr1.4:55839190-55839209 | MS.gene94814:intron | 25.0% |
| ! | TGATCTAAATTTCAAAAGAG+AGG | - | chr1.4:55837871-55837890 | MS.gene94814:intron | 25.0% |
| ! | TTATACTAAATCGCATATCA+CGG | - | chr1.4:55838313-55838332 | MS.gene94814:intron | 25.0% |
| ! | TTGAATCATTCTAAGTTAAG+GGG | - | chr1.4:55838150-55838169 | MS.gene94814:CDS | 25.0% |
| ! | TTTATAAGCACTTAAACAAG+TGG | + | chr1.4:55836925-55836944 | None:intergenic | 25.0% |
| !! | ACAACTTAACATGTATTTTG+GGG | + | chr1.4:55839748-55839767 | None:intergenic | 25.0% |
| !! | ATGTAATCTAAAATCCATAG+TGG | - | chr1.4:55838985-55839004 | MS.gene94814:CDS | 25.0% |
| !! | CACAACTTAACATGTATTTT+GGG | + | chr1.4:55839749-55839768 | None:intergenic | 25.0% |
| !! | CATATTTAATTGATAACCCT+TGG | + | chr1.4:55837578-55837597 | None:intergenic | 25.0% |
| !! | CTTTGATTTCTAAATATGAC+TGG | + | chr1.4:55838775-55838794 | None:intergenic | 25.0% |
| !! | GTTTTTGCATAATAAACTCA+AGG | + | chr1.4:55839273-55839292 | None:intergenic | 25.0% |
| !! | TACATCTTTTATTGTGGTAA+TGG | - | chr1.4:55837287-55837306 | MS.gene94814:intron | 25.0% |
| !! | TCACAACTTAACATGTATTT+TGG | + | chr1.4:55839750-55839769 | None:intergenic | 25.0% |
| !! | TTCTAGGAAATTGAAATTAC+AGG | - | chr1.4:55839189-55839208 | MS.gene94814:intron | 25.0% |
| !! | TTTAATCATTTGACCTTTTC+TGG | - | chr1.4:55840208-55840227 | MS.gene94814:intron | 25.0% |
| !!! | AAAGCTTATGCATTTTAATG+GGG | - | chr1.4:55841305-55841324 | MS.gene94814:intron | 25.0% |
| !!! | AAATTTGGTTTGTTGCATTT+TGG | - | chr1.4:55837360-55837379 | MS.gene94814:CDS | 25.0% |
| !!! | AAGAAAAGACTAGTTTTTTG+TGG | - | chr1.4:55839716-55839735 | MS.gene94814:intron | 25.0% |
| !!! | AAGGGAATGTAATTTTTTTG+AGG | + | chr1.4:55839254-55839273 | None:intergenic | 25.0% |
| !!! | AATGGTCATTTTCTTACATA+TGG | - | chr1.4:55837813-55837832 | MS.gene94814:intron | 25.0% |
| !!! | ATTATTTTTACTCTTCTCTG+TGG | - | chr1.4:55839934-55839953 | MS.gene94814:intron | 25.0% |
| !!! | ATTTGTAATTTTCAGGTTCA+AGG | - | chr1.4:55836728-55836747 | MS.gene94814:CDS | 25.0% |
| !!! | TATAAAGTGTTGTCAAACAA+AGG | + | chr1.4:55838298-55838317 | None:intergenic | 25.0% |
| !!! | TTATTTTTACTCTTCTCTGT+GGG | - | chr1.4:55839935-55839954 | MS.gene94814:intron | 25.0% |
| AAAAAACCTCAAAATTTGGC+GGG | + | chr1.4:55836281-55836300 | None:intergenic | 30.0% | |
| AAAAACAATGCATTCACCTT+TGG | + | chr1.4:55839525-55839544 | None:intergenic | 30.0% | |
| AAAATACTGAGATTTGAGAG+TGG | + | chr1.4:55837517-55837536 | None:intergenic | 30.0% | |
| AAAATTAATTAGTGGGGTTC+TGG | - | chr1.4:55837664-55837683 | MS.gene94814:intron | 30.0% | |
| AAAATTTGTGGCTGTAACTT+TGG | - | chr1.4:55840081-55840100 | MS.gene94814:intron | 30.0% | |
| AAATGATTCATAAAACACCC+TGG | + | chr1.4:55839223-55839242 | None:intergenic | 30.0% | |
| AAATTAAAGGCAGAAGGAAT+AGG | - | chr1.4:55840777-55840796 | MS.gene94814:intron | 30.0% | |
| AAATTTGTGGCTGTAACTTT+GGG | - | chr1.4:55840082-55840101 | MS.gene94814:intron | 30.0% | |
| AATAAAATAGTAGAGGCCAT+TGG | + | chr1.4:55837694-55837713 | None:intergenic | 30.0% | |
| AATATGCTGAAAACAGCTTA+TGG | - | chr1.4:55837048-55837067 | MS.gene94814:intron | 30.0% | |
| AATGCACTTAGCATACATAA+TGG | + | chr1.4:55839089-55839108 | None:intergenic | 30.0% | |
| ACAATGGTTTCAAAAAACTC+AGG | + | chr1.4:55837169-55837188 | None:intergenic | 30.0% | |
| ATTAAAACATAGAGAATGGC+AGG | + | chr1.4:55840446-55840465 | None:intergenic | 30.0% | |
| ATTAAATAAGCAATGTCGAG+AGG | + | chr1.4:55836844-55836863 | None:intergenic | 30.0% | |
| ATTAACGTCTAGTAGAGATT+AGG | + | chr1.4:55840530-55840549 | None:intergenic | 30.0% | |
| ATTCGAAGTATAATTTCCCA+AGG | - | chr1.4:55837558-55837577 | MS.gene94814:CDS | 30.0% | |
| CAACATAATCAGCTAATTTC+AGG | + | chr1.4:55839485-55839504 | None:intergenic | 30.0% | |
| CACTTAAACAAGTGGTTTAT+CGG | + | chr1.4:55836917-55836936 | None:intergenic | 30.0% | |
| CATTTATGCACATGTAAACA+AGG | + | chr1.4:55839595-55839614 | None:intergenic | 30.0% | |
| CTATACACACGATACAAATT+AGG | + | chr1.4:55841230-55841249 | None:intergenic | 30.0% | |
| CTTTCTGCATCAATTAAGAT+GGG | + | chr1.4:55839438-55839457 | None:intergenic | 30.0% | |
| GTATGTGTAGATATGATTGT+GGG | - | chr1.4:55840143-55840162 | MS.gene94814:intron | 30.0% | |
| TAATTCAGTGTTGTCAATTG+TGG | - | chr1.4:55838210-55838229 | MS.gene94814:intron | 30.0% | |
| TATTGTTGCCCATTAGTAAA+AGG | + | chr1.4:55837419-55837438 | None:intergenic | 30.0% | |
| TATTTGCAGGTATCTAAAGA+GGG | - | chr1.4:55837749-55837768 | MS.gene94814:intron | 30.0% | |
| TCCACAATAATGTACGTAAA+CGG | + | chr1.4:55837782-55837801 | None:intergenic | 30.0% | |
| TCTAAATTTCAAAAGAGAGG+GGG | - | chr1.4:55837874-55837893 | MS.gene94814:intron | 30.0% | |
| TCTTCATGAAGCTTGAAATT+TGG | - | chr1.4:55837345-55837364 | MS.gene94814:CDS | 30.0% | |
| TTAAAACATAGAGAATGGCA+GGG | + | chr1.4:55840445-55840464 | None:intergenic | 30.0% | |
| TTAAATAAGCAATGTCGAGA+GGG | + | chr1.4:55836843-55836862 | None:intergenic | 30.0% | |
| TTAGATACCTGCAAATAACA+GGG | + | chr1.4:55837746-55837765 | None:intergenic | 30.0% | |
| TTATTTGCAGGTATCTAAAG+AGG | - | chr1.4:55837748-55837767 | MS.gene94814:intron | 30.0% | |
| TTCGAAGTATAATTTCCCAA+GGG | - | chr1.4:55837559-55837578 | MS.gene94814:CDS | 30.0% | |
| TTTAGATACCTGCAAATAAC+AGG | + | chr1.4:55837747-55837766 | None:intergenic | 30.0% | |
| TTTATTGGATCTGTGATCTA+TGG | - | chr1.4:55840885-55840904 | MS.gene94814:intron | 30.0% | |
| TTTCTCTTATGGTCTTCAAT+AGG | - | chr1.4:55840931-55840950 | MS.gene94814:intron | 30.0% | |
| ! | AAGCTATATTCTTTTTGTCG+TGG | - | chr1.4:55839792-55839811 | MS.gene94814:intron | 30.0% |
| ! | ACATATCGTTTTACCTTTTC+TGG | - | chr1.4:55839854-55839873 | MS.gene94814:CDS | 30.0% |
| ! | ACTCTTTTCATAGACTATTG+TGG | - | chr1.4:55837012-55837031 | MS.gene94814:intron | 30.0% |
| ! | AGCTATATTCTTTTTGTCGT+GGG | - | chr1.4:55839793-55839812 | MS.gene94814:intron | 30.0% |
| ! | ATAAGTTTGTTTGAGGTTAG+AGG | + | chr1.4:55841188-55841207 | None:intergenic | 30.0% |
| ! | ATTTAGAAATCAAAGCATCC+AGG | - | chr1.4:55838780-55838799 | MS.gene94814:intron | 30.0% |
| ! | GTGCATTTTACTAATGTGTT+TGG | - | chr1.4:55837195-55837214 | MS.gene94814:intron | 30.0% |
| ! | GTTGTTCTGATTTTATCATC+TGG | + | chr1.4:55836398-55836417 | None:intergenic | 30.0% |
| ! | TAACTACATTTCGATTTGTC+TGG | + | chr1.4:55837602-55837621 | None:intergenic | 30.0% |
| ! | TTTTCTTTTGCTTGTAAAGG+AGG | - | chr1.4:55839324-55839343 | MS.gene94814:intron | 30.0% |
| !! | CATCTGCTTTTAATGTAAAC+AGG | - | chr1.4:55840184-55840203 | MS.gene94814:intron | 30.0% |
| !! | CTGGAAGTATTTAACAGTTT+AGG | - | chr1.4:55836880-55836899 | MS.gene94814:intron | 30.0% |
| !! | GCAAGCATTGTATATTTTGA+CGG | - | chr1.4:55838663-55838682 | MS.gene94814:intron | 30.0% |
| !! | TATTTTTACTCTTCTCTGTG+GGG | - | chr1.4:55839936-55839955 | MS.gene94814:intron | 30.0% |
| !! | TGCATTTGATGATGCTTAAA+AGG | + | chr1.4:55839969-55839988 | None:intergenic | 30.0% |
| !!! | CAAGCATTGTATATTTTGAC+GGG | - | chr1.4:55838664-55838683 | MS.gene94814:intron | 30.0% |
| !!! | CATAATTGATATTTTGGCTC+AGG | + | chr1.4:55840565-55840584 | None:intergenic | 30.0% |
| !!! | CTACAATGTTTGACCTTTTT+TGG | - | chr1.4:55840487-55840506 | MS.gene94814:intron | 30.0% |
| AAAATAAAAGAGCTTCACGG+AGG | - | chr1.4:55839360-55839379 | MS.gene94814:intron | 35.0% | |
| AAAATTAGGGCAACCAGAAA+AGG | + | chr1.4:55839870-55839889 | None:intergenic | 35.0% | |
| AAATAAAAGAGCTTCACGGA+GGG | - | chr1.4:55839361-55839380 | MS.gene94814:intron | 35.0% | |
| AAGAAGGGTCATACTCATAT+AGG | + | chr1.4:55838476-55838495 | None:intergenic | 35.0% | |
| AAGTCGTTAGAATGAGTCAA+AGG | + | chr1.4:55838546-55838565 | None:intergenic | 35.0% | |
| AATGCGATGCATAAATTGGA+AGG | - | chr1.4:55838010-55838029 | MS.gene94814:intron | 35.0% | |
| ACATCAGTGTTGTCAAATAG+TGG | + | chr1.4:55838386-55838405 | None:intergenic | 35.0% | |
| ACCGTTTACGTACATTATTG+TGG | - | chr1.4:55837778-55837797 | MS.gene94814:intron | 35.0% | |
| ACTATCTCATGTTCAACCAT+TGG | + | chr1.4:55838912-55838931 | None:intergenic | 35.0% | |
| AGTCGTTAGAATGAGTCAAA+GGG | + | chr1.4:55838545-55838564 | None:intergenic | 35.0% | |
| ATTACTGATGATATGCAGGT+TGG | + | chr1.4:55840317-55840336 | None:intergenic | 35.0% | |
| ATTTATAGGTGATAACCTCG+TGG | + | chr1.4:55838719-55838738 | None:intergenic | 35.0% | |
| CCATCTTAATTGATGCAGAA+AGG | - | chr1.4:55839436-55839455 | MS.gene94814:intron | 35.0% | |
| CCTTTCTGCATCAATTAAGA+TGG | + | chr1.4:55839439-55839458 | None:intergenic | 35.0% | |
| CTGCTAATGTGGTATGTTAA+TGG | - | chr1.4:55841085-55841104 | MS.gene94814:intron | 35.0% | |
| CTGCTTGTAGACCATAAAAA+TGG | + | chr1.4:55840408-55840427 | None:intergenic | 35.0% | |
| GGGAAAATAAAAGAGCTTCA+CGG | - | chr1.4:55839357-55839376 | MS.gene94814:intron | 35.0% | |
| GGGTGAAAAAAAGAAACAAC+AGG | + | chr1.4:55839043-55839062 | None:intergenic | 35.0% | |
| GGTAAAACGATATGTACCAT+TGG | + | chr1.4:55839849-55839868 | None:intergenic | 35.0% | |
| GGTATGTGTAGATATGATTG+TGG | - | chr1.4:55840142-55840161 | MS.gene94814:intron | 35.0% | |
| GTTACCCAACGTAAAATTTG+TGG | - | chr1.4:55840069-55840088 | MS.gene94814:intron | 35.0% | |
| GTTATCGGGAAACTATACAT+CGG | - | chr1.4:55840804-55840823 | MS.gene94814:intron | 35.0% | |
| GTTTGGTACTCATTAGATTG+CGG | - | chr1.4:55837212-55837231 | MS.gene94814:intron | 35.0% | |
| TAAAATGCACGCATACACAA+TGG | + | chr1.4:55837185-55837204 | None:intergenic | 35.0% | |
| TACTATCTTGACTTCTTCTC+TGG | - | chr1.4:55837839-55837858 | MS.gene94814:intron | 35.0% | |
| TATACTTCGAATCAGTTGGT+GGG | + | chr1.4:55837550-55837569 | None:intergenic | 35.0% | |
| TGAAGATCTTCAAGCATTTC+TGG | - | chr1.4:55838096-55838115 | MS.gene94814:intron | 35.0% | |
| TGTGCAAAGATGATAAAGAC+AGG | + | chr1.4:55837958-55837977 | None:intergenic | 35.0% | |
| TTACGTTGGGTAACCTTAAA+AGG | + | chr1.4:55840063-55840082 | None:intergenic | 35.0% | |
| TTATACTTCGAATCAGTTGG+TGG | + | chr1.4:55837551-55837570 | None:intergenic | 35.0% | |
| TTGCATTACTGATGATATGC+AGG | + | chr1.4:55840321-55840340 | None:intergenic | 35.0% | |
| TTGTGGACAATGAAACGTAA+TGG | - | chr1.4:55837795-55837814 | MS.gene94814:intron | 35.0% | |
| TTTATAGGTGATAACCTCGT+GGG | + | chr1.4:55838718-55838737 | None:intergenic | 35.0% | |
| ! | AACTCGATTCTGAAAGATCT+TGG | + | chr1.4:55838623-55838642 | None:intergenic | 35.0% |
| ! | ACAGCCACAAATTTTACGTT+GGG | + | chr1.4:55840076-55840095 | None:intergenic | 35.0% |
| ! | ACTCGATTCTGAAAGATCTT+GGG | + | chr1.4:55838622-55838641 | None:intergenic | 35.0% |
| ! | AGATACTTGTGAGACTGTTT+TGG | + | chr1.4:55837103-55837122 | None:intergenic | 35.0% |
| ! | ATCTTGTATTTTTCCAGTGC+AGG | - | chr1.4:55839395-55839414 | MS.gene94814:intron | 35.0% |
| ! | CGTGGATACATCTTTTATTG+TGG | - | chr1.4:55837281-55837300 | MS.gene94814:intron | 35.0% |
| ! | GCTGTAACTTTGGGAAAAAA+TGG | - | chr1.4:55840091-55840110 | MS.gene94814:intron | 35.0% |
| ! | TACAGCCACAAATTTTACGT+TGG | + | chr1.4:55840077-55840096 | None:intergenic | 35.0% |
| ! | TAGGATACATTTGAAGTGCT+TGG | + | chr1.4:55841211-55841230 | None:intergenic | 35.0% |
| ! | TCAAAAAACTCAGGCTTGTT+TGG | + | chr1.4:55837160-55837179 | None:intergenic | 35.0% |
| ! | TGCTCATGCCTTTTACTAAT+GGG | - | chr1.4:55837408-55837427 | MS.gene94814:intron | 35.0% |
| ! | TGCTTGGATAAGTTTGTTTG+AGG | + | chr1.4:55841195-55841214 | None:intergenic | 35.0% |
| ! | TTGCTCATGCCTTTTACTAA+TGG | - | chr1.4:55837407-55837426 | MS.gene94814:intron | 35.0% |
| ! | TTTCGCTTGCCTTATGTTTT+TGG | - | chr1.4:55839151-55839170 | MS.gene94814:intron | 35.0% |
| ! | TTTTGCTTGTAAAGGAGGTT+GGG | - | chr1.4:55839329-55839348 | MS.gene94814:intron | 35.0% |
| !! | AAGCCACTCTTTAAAGCATT+TGG | + | chr1.4:55836699-55836718 | None:intergenic | 35.0% |
| !! | AGTTTGTTATCTGCATTGGA+TGG | - | chr1.4:55838639-55838658 | MS.gene94814:intron | 35.0% |
| !! | ATCGAGTTTGTTATCTGCAT+TGG | - | chr1.4:55838635-55838654 | MS.gene94814:intron | 35.0% |
| !! | CTCATTCTAACGACTTTTTC+AGG | - | chr1.4:55838550-55838569 | MS.gene94814:intron | 35.0% |
| !! | CTGATTTTATCATCTGGCTT+AGG | + | chr1.4:55836392-55836411 | None:intergenic | 35.0% |
| !! | CTTTAATTTTGCCACTGACT+GGG | + | chr1.4:55840766-55840785 | None:intergenic | 35.0% |
| !! | GAGACTAATTGTTCAAGTTG+TGG | - | chr1.4:55838412-55838431 | MS.gene94814:intron | 35.0% |
| !! | TGCATTTTAATGGGGATTTC+AGG | - | chr1.4:55841313-55841332 | MS.gene94814:intron | 35.0% |
| !!! | ACTTTTTGTTTCTATACGCC+AGG | - | chr1.4:55839636-55839655 | MS.gene94814:intron | 35.0% |
| !!! | CGCTTGTTTCTATCCTTTTA+AGG | - | chr1.4:55840047-55840066 | MS.gene94814:intron | 35.0% |
| !!! | TAACATGTATTTTGGGGCAA+GGG | + | chr1.4:55839742-55839761 | None:intergenic | 35.0% |
| !!! | TGTAATTTTCAGGTTCAAGG+AGG | - | chr1.4:55836731-55836750 | MS.gene94814:CDS | 35.0% |
| !!! | TTAACATGTATTTTGGGGCA+AGG | + | chr1.4:55839743-55839762 | None:intergenic | 35.0% |
| AAACACAAGGCTCGTTTCTA+AGG | - | chr1.4:55836799-55836818 | MS.gene94814:CDS | 40.0% | |
| AAAGGAAGCAACCTTCAAAG+CGG | + | chr1.4:55836420-55836439 | None:intergenic | 40.0% | |
| AAAGGCAGAAGGAATAGGAA+CGG | - | chr1.4:55840782-55840801 | MS.gene94814:intron | 40.0% | |
| AAATTTCAAAAGAGAGGGGG+AGG | - | chr1.4:55837877-55837896 | MS.gene94814:intron | 40.0% | |
| AAGGAATAGGAACGGTTATC+GGG | - | chr1.4:55840790-55840809 | MS.gene94814:intron | 40.0% | |
| AATAGCCTCTTGCAATTGCA+AGG | - | chr1.4:55838435-55838454 | MS.gene94814:intron | 40.0% | |
| AATCAGAACAACCGCTTTGA+AGG | - | chr1.4:55836406-55836425 | MS.gene94814:intron | 40.0% | |
| AATTGATGCAGAAAGGCCAA+GGG | - | chr1.4:55839443-55839462 | MS.gene94814:intron | 40.0% | |
| AATTTCAAAAGAGAGGGGGA+GGG | - | chr1.4:55837878-55837897 | MS.gene94814:intron | 40.0% | |
| ACATACCACATTAGCAGCAA+AGG | + | chr1.4:55841082-55841101 | None:intergenic | 40.0% | |
| ACCTAACTCATATCTCCAAC+AGG | + | chr1.4:55841278-55841297 | None:intergenic | 40.0% | |
| ACCTGTTGGAGATATGAGTT+AGG | - | chr1.4:55841274-55841293 | MS.gene94814:CDS | 40.0% | |
| AGACAACTTATTGGAATCGC+TGG | - | chr1.4:55840262-55840281 | MS.gene94814:intron | 40.0% | |
| AGATCCAATAAATGCATCCC+CGG | + | chr1.4:55840877-55840896 | None:intergenic | 40.0% | |
| ATGCTCAGCTAAGTTTCCAA+AGG | - | chr1.4:55839506-55839525 | MS.gene94814:intron | 40.0% | |
| CAAGAAATCAGGTACAGACT+TGG | + | chr1.4:55837489-55837508 | None:intergenic | 40.0% | |
| CAATTTATGCATCGCATTGC+TGG | + | chr1.4:55838008-55838027 | None:intergenic | 40.0% | |
| CAGCAATGCGATGCATAAAT+TGG | - | chr1.4:55838006-55838025 | MS.gene94814:intron | 40.0% | |
| CATACCACATTAGCAGCAAA+GGG | + | chr1.4:55841081-55841100 | None:intergenic | 40.0% | |
| CATGTTCAACCATTGGCATT+GGG | + | chr1.4:55838905-55838924 | None:intergenic | 40.0% | |
| CATTCCAAATCTTTCTGCCA+AGG | - | chr1.4:55840382-55840401 | MS.gene94814:CDS | 40.0% | |
| CCAATTTGTGTCTTTCGCAA+AGG | - | chr1.4:55840957-55840976 | MS.gene94814:intron | 40.0% | |
| CCAGTCAGTGGCAAAATTAA+AGG | - | chr1.4:55840764-55840783 | MS.gene94814:intron | 40.0% | |
| CCTTTGCGAAAGACACAAAT+TGG | + | chr1.4:55840960-55840979 | None:intergenic | 40.0% | |
| CTCGTTTAGGTCTAAACACA+AGG | - | chr1.4:55836786-55836805 | MS.gene94814:CDS | 40.0% | |
| CTTGGCAGAAAGATTTGGAA+TGG | + | chr1.4:55840384-55840403 | None:intergenic | 40.0% | |
| GAAGGAATAGGAACGGTTAT+CGG | - | chr1.4:55840789-55840808 | MS.gene94814:intron | 40.0% | |
| GATAACCTTTCTTTGCTGAC+AGG | - | chr1.4:55839994-55840013 | MS.gene94814:intron | 40.0% | |
| GATCCATACTTTATAGCACC+AGG | - | chr1.4:55838516-55838535 | MS.gene94814:intron | 40.0% | |
| GATTCATAAAACACCCTGGT+TGG | + | chr1.4:55839219-55839238 | None:intergenic | 40.0% | |
| GCTGCTAGAATTGATTATGG+AGG | + | chr1.4:55836675-55836694 | None:intergenic | 40.0% | |
| GGAGCTGCTAGAATTGATTA+TGG | + | chr1.4:55836678-55836697 | None:intergenic | 40.0% | |
| GGTGGATGTAGACAACTTAT+TGG | - | chr1.4:55840253-55840272 | MS.gene94814:intron | 40.0% | |
| GTAGACCATAAAAATGGCCT+TGG | + | chr1.4:55840402-55840421 | None:intergenic | 40.0% | |
| GTATCATTGGAGGATATCCA+GGG | + | chr1.4:55838599-55838618 | None:intergenic | 40.0% | |
| GTGGCAAAATTAAAGGCAGA+AGG | - | chr1.4:55840771-55840790 | MS.gene94814:intron | 40.0% | |
| TAATTGATGCAGAAAGGCCA+AGG | - | chr1.4:55839442-55839461 | MS.gene94814:intron | 40.0% | |
| TATCATTGGAGGATATCCAG+GGG | + | chr1.4:55838598-55838617 | None:intergenic | 40.0% | |
| TCACACGTTATCGTCTAAGT+CGG | + | chr1.4:55838943-55838962 | None:intergenic | 40.0% | |
| TCATGTTCAACCATTGGCAT+TGG | + | chr1.4:55838906-55838925 | None:intergenic | 40.0% | |
| TGCACTTGCAATATCCACTA+TGG | + | chr1.4:55839002-55839021 | None:intergenic | 40.0% | |
| TGTTTAGACCTAAACGAGCA+AGG | + | chr1.4:55836784-55836803 | None:intergenic | 40.0% | |
| TTGCGAAAGACACAAATTGG+TGG | + | chr1.4:55840957-55840976 | None:intergenic | 40.0% | |
| TTGTGGATCGCAAGAAATAG+CGG | - | chr1.4:55838227-55838246 | MS.gene94814:intron | 40.0% | |
| TTTATGACTGCTGACACCAA+TGG | - | chr1.4:55839830-55839849 | MS.gene94814:CDS | 40.0% | |
| ! | AAATTACAGGGTATCCAACC+AGG | - | chr1.4:55839202-55839221 | MS.gene94814:intron | 40.0% |
| ! | AATTACAGGGTATCCAACCA+GGG | - | chr1.4:55839203-55839222 | MS.gene94814:intron | 40.0% |
| ! | ATACTTCGAATCAGTTGGTG+GGG | + | chr1.4:55837549-55837568 | None:intergenic | 40.0% |
| ! | CTCGATTCTGAAAGATCTTG+GGG | + | chr1.4:55838621-55838640 | None:intergenic | 40.0% |
| ! | CTTTTGCTTGTAAAGGAGGT+TGG | - | chr1.4:55839328-55839347 | MS.gene94814:intron | 40.0% |
| ! | GAAAGATCTTGGGGTATCAT+TGG | + | chr1.4:55838612-55838631 | None:intergenic | 40.0% |
| ! | TTAACAGTTTAGGCGCTGTT+TGG | - | chr1.4:55836890-55836909 | MS.gene94814:intron | 40.0% |
| ! | TTATGCTCCCTGTTATTTGC+AGG | - | chr1.4:55837736-55837755 | MS.gene94814:intron | 40.0% |
| ! | TTCATTCCCGCCAAATTTTG+AGG | - | chr1.4:55836272-55836291 | MS.gene94814:CDS | 40.0% |
| ! | TTTTAATGGGGATTTCAGGC+AGG | - | chr1.4:55841317-55841336 | MS.gene94814:intron | 40.0% |
| !! | ATCCCTGAAGTTCTAGAAAC+AGG | - | chr1.4:55840663-55840682 | MS.gene94814:intron | 40.0% |
| !! | ATCCCTGTTTCTAGAACTTC+AGG | + | chr1.4:55840669-55840688 | None:intergenic | 40.0% |
| !! | CAACCTGGTGCTATAAAGTA+TGG | + | chr1.4:55838522-55838541 | None:intergenic | 40.0% |
| !! | CATTGATTCTACTTGACGCT+AGG | + | chr1.4:55836608-55836627 | None:intergenic | 40.0% |
| !! | CCTTTAATTTTGCCACTGAC+TGG | + | chr1.4:55840767-55840786 | None:intergenic | 40.0% |
| !! | GCTCCAAATGCTTTAAAGAG+TGG | - | chr1.4:55836693-55836712 | MS.gene94814:intron | 40.0% |
| !! | TCCCTGAAGTTCTAGAAACA+GGG | - | chr1.4:55840664-55840683 | MS.gene94814:intron | 40.0% |
| !! | TCCCTGTTTCTAGAACTTCA+GGG | + | chr1.4:55840668-55840687 | None:intergenic | 40.0% |
| !!! | AATTTTCAGGTTCAAGGAGG+TGG | - | chr1.4:55836734-55836753 | MS.gene94814:CDS | 40.0% |
| !!! | TTCTGCCAAGGCCATTTTTA+TGG | - | chr1.4:55840394-55840413 | MS.gene94814:intron | 40.0% |
| AAAGAGAGGGAAACGCACAA+CGG | + | chr1.4:55836250-55836269 | None:intergenic | 45.0% | |
| AAAGTATGGATCTCCTGCCA+TGG | + | chr1.4:55838508-55838527 | None:intergenic | 45.0% | |
| AACGGTAGCCAAGAAATCGA+CGG | + | chr1.4:55836360-55836379 | None:intergenic | 45.0% | |
| AGATCATCTAACCCTTCCCT+TGG | + | chr1.4:55839462-55839481 | None:intergenic | 45.0% | |
| ATTTCAAAAGAGAGGGGGAG+GGG | - | chr1.4:55837879-55837898 | MS.gene94814:intron | 45.0% | |
| CAACTCTGCGAGTTATGCTA+AGG | + | chr1.4:55838178-55838197 | None:intergenic | 45.0% | |
| CCATGGCAGGATACAAAGAA+GGG | + | chr1.4:55838491-55838510 | None:intergenic | 45.0% | |
| CGAACTTGTATACATACCCC+TGG | - | chr1.4:55838579-55838598 | MS.gene94814:intron | 45.0% | |
| GAGAAATCAGGTGCAGACTA+GGG | + | chr1.4:55837467-55837486 | None:intergenic | 45.0% | |
| GAGTGGATGTGCAAGAAATC+AGG | + | chr1.4:55837500-55837519 | None:intergenic | 45.0% | |
| GAGTTAGGTGGATCTAGTTG+AGG | - | chr1.4:55837909-55837928 | MS.gene94814:intron | 45.0% | |
| GCGGGAATGAAAGAAAGAGA+GGG | + | chr1.4:55836263-55836282 | None:intergenic | 45.0% | |
| GCGTCAAGTAGAATCAATGC+TGG | - | chr1.4:55836609-55836628 | MS.gene94814:intron | 45.0% | |
| GCTATAGTGCTATAGAGTGG+CGG | + | chr1.4:55838362-55838381 | None:intergenic | 45.0% | |
| GGAATCGCTGGAGTTAAGAA+AGG | - | chr1.4:55840274-55840293 | MS.gene94814:intron | 45.0% | |
| GGGGCATATTAGATGAGCTA+CGG | - | chr1.4:55837250-55837269 | MS.gene94814:intron | 45.0% | |
| GGTACAGACTTGGAGAAATC+AGG | + | chr1.4:55837479-55837498 | None:intergenic | 45.0% | |
| GGTATCATTGGAGGATATCC+AGG | + | chr1.4:55838600-55838619 | None:intergenic | 45.0% | |
| GTGACACGTACTGAATGACT+TGG | - | chr1.4:55840640-55840659 | MS.gene94814:intron | 45.0% | |
| TATGCTGTAGTGCTAGAGTG+CGG | - | chr1.4:55838266-55838285 | MS.gene94814:intron | 45.0% | |
| TGGCTTAGGATAAGCAGCAA+CGG | + | chr1.4:55836378-55836397 | None:intergenic | 45.0% | |
| TGTAGACTTGTAGCACGAAC+TGG | + | chr1.4:55840472-55840491 | None:intergenic | 45.0% | |
| TTAACCTGCCTTGCTCGTTT+AGG | - | chr1.4:55836773-55836792 | MS.gene94814:CDS | 45.0% | |
| TTGTAAAGGAGGTTGGGAGT+GGG | - | chr1.4:55839335-55839354 | MS.gene94814:intron | 45.0% | |
| ! | AGATCTTGGGGTATCATTGG+AGG | + | chr1.4:55838609-55838628 | None:intergenic | 45.0% |
| ! | ATGGCCTTGGCAGAAAGATT+TGG | + | chr1.4:55840389-55840408 | None:intergenic | 45.0% |
| ! | GGTGCTATAGTGCTATAGAG+TGG | + | chr1.4:55838365-55838384 | None:intergenic | 45.0% |
| ! | TTAGATGAGCTACGGACTGA+TGG | - | chr1.4:55837258-55837277 | MS.gene94814:intron | 45.0% |
| !! | AAGGCAGGTTAAAGCATTGC+CGG | + | chr1.4:55836765-55836784 | None:intergenic | 45.0% |
| !! | ATCAGTCACCGTCGATTTCT+TGG | - | chr1.4:55836349-55836368 | MS.gene94814:intron | 45.0% |
| !! | ACTATTAAAAAAAAAAAAAA+AGG | + | chr1.4:55836438-55836457 | None:intergenic | 5.0% |
| AAGTCCTACCACAGAAGAGG+TGG | - | chr1.4:55840235-55840254 | MS.gene94814:intron | 50.0% | |
| ACATCCACCTCTTCTGTGGT+AGG | + | chr1.4:55840242-55840261 | None:intergenic | 50.0% | |
| AGCAAGTCCTACCACAGAAG+AGG | - | chr1.4:55840232-55840251 | MS.gene94814:intron | 50.0% | |
| AGGATAGAAACAAGCGCTCG+CGG | + | chr1.4:55840043-55840062 | None:intergenic | 50.0% | |
| AGTGGTATCAACAAGCTCCG+CGG | + | chr1.4:55840850-55840869 | None:intergenic | 50.0% | |
| ATACACGCACGTGCTTATGC+AGG | - | chr1.4:55836316-55836335 | MS.gene94814:intron | 50.0% | |
| ATGCAGAAAGGCCAAGGGAA+GGG | - | chr1.4:55839448-55839467 | MS.gene94814:intron | 50.0% | |
| CATCTAATATGCCCCTGCCT+GGG | + | chr1.4:55837245-55837264 | None:intergenic | 50.0% | |
| CCATGCCTGTCAGCAAAGAA+AGG | + | chr1.4:55840002-55840021 | None:intergenic | 50.0% | |
| CCCTTCTTTGTATCCTGCCA+TGG | - | chr1.4:55838488-55838507 | MS.gene94814:intron | 50.0% | |
| CCTTTCTTTGCTGACAGGCA+TGG | - | chr1.4:55839999-55840018 | MS.gene94814:intron | 50.0% | |
| CTTGTAAAGGAGGTTGGGAG+TGG | - | chr1.4:55839334-55839353 | MS.gene94814:intron | 50.0% | |
| CTTGTTGATACCACTGGTGC+CGG | - | chr1.4:55840855-55840874 | MS.gene94814:CDS | 50.0% | |
| GAATAAAGGACGCTAGGCGT+GGG | + | chr1.4:55841394-55841413 | None:intergenic | 50.0% | |
| GAATGAGTCAAAGGGCAACC+TGG | + | chr1.4:55838537-55838556 | None:intergenic | 50.0% | |
| GCAAAGGGTAGCATTGTCTC+TGG | + | chr1.4:55841066-55841085 | None:intergenic | 50.0% | |
| GCCATGGCAGGATACAAAGA+AGG | + | chr1.4:55838492-55838511 | None:intergenic | 50.0% | |
| GCTACCCTTTGCTGCTAATG+TGG | - | chr1.4:55841074-55841093 | MS.gene94814:intron | 50.0% | |
| GCTCATCATCCCAATGCCAA+TGG | - | chr1.4:55838893-55838912 | MS.gene94814:intron | 50.0% | |
| GGAAGCCTTGCAATTGCAAG+AGG | + | chr1.4:55838443-55838462 | None:intergenic | 50.0% | |
| GGAGAAATCAGGTGCAGACT+AGG | + | chr1.4:55837468-55837487 | None:intergenic | 50.0% | |
| GGCGGGAATGAAAGAAAGAG+AGG | + | chr1.4:55836264-55836283 | None:intergenic | 50.0% | |
| GTCTACATCCACCTCTTCTG+TGG | + | chr1.4:55840246-55840265 | None:intergenic | 50.0% | |
| TAGACCTAAACGAGCAAGGC+AGG | + | chr1.4:55836780-55836799 | None:intergenic | 50.0% | |
| TCATCTAATATGCCCCTGCC+TGG | + | chr1.4:55837246-55837265 | None:intergenic | 50.0% | |
| TCTTTGTATCCTGCCATGGC+AGG | - | chr1.4:55838492-55838511 | MS.gene94814:intron | 50.0% | |
| TGAATAAAGGACGCTAGGCG+TGG | + | chr1.4:55841395-55841414 | None:intergenic | 50.0% | |
| TGCTCCTAGATCTCTGCACT+TGG | + | chr1.4:55841345-55841364 | None:intergenic | 50.0% | |
| TGTAAAGGAGGTTGGGAGTG+GGG | - | chr1.4:55839336-55839355 | MS.gene94814:intron | 50.0% | |
| TTGTTGATACCACTGGTGCC+GGG | - | chr1.4:55840856-55840875 | MS.gene94814:CDS | 50.0% | |
| TTTCAAAAGAGAGGGGGAGG+GGG | - | chr1.4:55837880-55837899 | MS.gene94814:intron | 50.0% | |
| ! | AGAGATCTAGGAGCACGAAG+CGG | - | chr1.4:55841350-55841369 | MS.gene94814:intron | 50.0% |
| ! | GTTCAAGGAGGTGGTAATGC+CGG | - | chr1.4:55836743-55836762 | MS.gene94814:CDS | 50.0% |
| ! | TTGGCATTGGGATGATGAGC+TGG | + | chr1.4:55838893-55838912 | None:intergenic | 50.0% |
| ! | TTTTTCCAGTGCAGGCAGCT+AGG | - | chr1.4:55839403-55839422 | MS.gene94814:intron | 50.0% |
| !! | GTAGGACTTGCTGCCAGAAA+AGG | + | chr1.4:55840224-55840243 | None:intergenic | 50.0% |
| ACGCACGTGCTTATGCAGGT+GGG | - | chr1.4:55836320-55836339 | MS.gene94814:intron | 55.0% | |
| CTGACTGGGTGCAAGGGAAA+AGG | + | chr1.4:55840752-55840771 | None:intergenic | 55.0% | |
| GATGCAGAAAGGCCAAGGGA+AGG | - | chr1.4:55839447-55839466 | MS.gene94814:intron | 55.0% | |
| GGTGCCAAGTGCAGAGATCT+AGG | - | chr1.4:55841338-55841357 | MS.gene94814:intron | 55.0% | |
| GTAAAGGAGGTTGGGAGTGG+GGG | - | chr1.4:55839337-55839356 | MS.gene94814:intron | 55.0% | |
| GTGGTATCAACAAGCTCCGC+GGG | + | chr1.4:55840849-55840868 | None:intergenic | 55.0% | |
| TAGATTGCGGATGACAGCCC+AGG | - | chr1.4:55837225-55837244 | MS.gene94814:intron | 55.0% | |
| TATGGATCTCCTGCCATGGC+AGG | + | chr1.4:55838504-55838523 | None:intergenic | 55.0% | |
| TGCTCTAGTTGTTGCCCACG+AGG | - | chr1.4:55838701-55838720 | MS.gene94814:intron | 55.0% | |
| TTCAAAAGAGAGGGGGAGGG+GGG | - | chr1.4:55837881-55837900 | MS.gene94814:intron | 55.0% | |
| TTCTTCCTAGCTGCCTGCAC+TGG | + | chr1.4:55839411-55839430 | None:intergenic | 55.0% | |
| TTGCTGACAGGCATGGACAG+AGG | - | chr1.4:55840006-55840025 | MS.gene94814:intron | 55.0% | |
| TTTCCCTTGCACCCAGTCAG+TGG | - | chr1.4:55840752-55840771 | MS.gene94814:intron | 55.0% | |
| ! | GGTGCCGGGGATGCATTTAT+TGG | - | chr1.4:55840870-55840889 | MS.gene94814:CDS | 55.0% |
| ! | TGTTGATACCACTGGTGCCG+GGG | - | chr1.4:55840857-55840876 | MS.gene94814:CDS | 55.0% |
| ! | TTGCCACTGACTGGGTGCAA+GGG | + | chr1.4:55840758-55840777 | None:intergenic | 55.0% |
| ! | TTTGCCACTGACTGGGTGCA+AGG | + | chr1.4:55840759-55840778 | None:intergenic | 55.0% |
| !! | AACGGTGGCGCTTTGAGGAA+CGG | + | chr1.4:55836232-55836251 | None:intergenic | 55.0% |
| !! | CTGCTCGAGAGAAGTGTCAG+TGG | - | chr1.4:55840121-55840140 | MS.gene94814:intron | 55.0% |
| !! | GCGGAGCTTGTTGATACCAC+TGG | - | chr1.4:55840849-55840868 | MS.gene94814:CDS | 55.0% |
| !! | GTGCTTATGCAGGTGGGTTG+CGG | - | chr1.4:55836326-55836345 | MS.gene94814:intron | 55.0% |
| AAATGCATCCCCGGCACCAG+TGG | + | chr1.4:55840868-55840887 | None:intergenic | 60.0% | |
| CACGCACGTGCTTATGCAGG+TGG | - | chr1.4:55836319-55836338 | MS.gene94814:intron | 60.0% | |
| GAGAGGGAAACGCACAACGG+TGG | + | chr1.4:55836247-55836266 | None:intergenic | 60.0% | |
| GTATCAACAAGCTCCGCGGG+CGG | + | chr1.4:55840846-55840865 | None:intergenic | 60.0% | |
| ! | AGGGGGGAGCATGAGTTAGG+TGG | - | chr1.4:55837897-55837916 | MS.gene94814:intron | 60.0% |
| ! | TGAGCTACGGACTGATGGCG+TGG | - | chr1.4:55837263-55837282 | MS.gene94814:intron | 60.0% |
| !! | GTGGGGTTCTGGACTGCCAA+TGG | - | chr1.4:55837675-55837694 | MS.gene94814:intron | 60.0% |
| CGCACAACGGTGGCGCTTTG+AGG | + | chr1.4:55836237-55836256 | None:intergenic | 65.0% | |
| TGCGGATGACAGCCCAGGCA+GGG | - | chr1.4:55837230-55837249 | MS.gene94814:intron | 65.0% | |
| TTGCGGATGACAGCCCAGGC+AGG | - | chr1.4:55837229-55837248 | MS.gene94814:intron | 65.0% | |
| ! | GGGAGGGGGGAGCATGAGTT+AGG | - | chr1.4:55837894-55837913 | MS.gene94814:intron | 65.0% |
| !! | AGCTGAGAGCATTCCGCCCG+CGG | - | chr1.4:55840830-55840849 | MS.gene94814:CDS | 65.0% |
| !! | GGCGCTTTGAGGAACGGAGG+AGG | + | chr1.4:55836226-55836245 | None:intergenic | 65.0% |
| !! | GGTGGCGCTTTGAGGAACGG+AGG | + | chr1.4:55836229-55836248 | None:intergenic | 65.0% |
| ACGCTAGGCGTGGGTCTGCG+CGG | + | chr1.4:55841385-55841404 | None:intergenic | 70.0% | |
| AGGCGTGGGTCTGCGCGGTA+TGG | + | chr1.4:55841380-55841399 | None:intergenic | 70.0% | |
| GCGGATGACAGCCCAGGCAG+GGG | - | chr1.4:55837231-55837250 | MS.gene94814:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 55836216 | 55841418 | 55836216 | ID=MS.gene94814 |
| chr1.4 | mRNA | 55836216 | 55841418 | 55836216 | ID=MS.gene94814.t1;Parent=MS.gene94814 |
| chr1.4 | exon | 55841383 | 55841418 | 55841383 | ID=MS.gene94814.t1.exon1;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55841383 | 55841418 | 55841383 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55841207 | 55841296 | 55841207 | ID=MS.gene94814.t1.exon2;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55841207 | 55841296 | 55841207 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55840814 | 55840891 | 55840814 | ID=MS.gene94814.t1.exon3;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55840814 | 55840891 | 55840814 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55840332 | 55840406 | 55840332 | ID=MS.gene94814.t1.exon4;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55840332 | 55840406 | 55840332 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55839824 | 55839876 | 55839824 | ID=MS.gene94814.t1.exon5;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55839824 | 55839876 | 55839824 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55838912 | 55839062 | 55838912 | ID=MS.gene94814.t1.exon6;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55838912 | 55839062 | 55838912 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55838107 | 55838217 | 55838107 | ID=MS.gene94814.t1.exon7;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55838107 | 55838217 | 55838107 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55837492 | 55837618 | 55837492 | ID=MS.gene94814.t1.exon8;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55837492 | 55837618 | 55837492 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55837303 | 55837400 | 55837303 | ID=MS.gene94814.t1.exon9;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55837303 | 55837400 | 55837303 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55836728 | 55836866 | 55836728 | ID=MS.gene94814.t1.exon10;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55836728 | 55836866 | 55836728 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55836539 | 55836591 | 55836539 | ID=MS.gene94814.t1.exon11;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55836539 | 55836591 | 55836539 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| chr1.4 | exon | 55836216 | 55836299 | 55836216 | ID=MS.gene94814.t1.exon12;Parent=MS.gene94814.t1 |
| chr1.4 | CDS | 55836216 | 55836299 | 55836216 | ID=cds.MS.gene94814.t1;Parent=MS.gene94814.t1 |
| Gene Sequence |
| Protein sequence |
