AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006142.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006142.01.T01 MTR_1g115295 91.256 629 24 3 1 627 1 600 0.0 1179
MsG0180006142.01.T01 MTR_1g018280 71.462 431 47 6 87 517 58 412 0.0 581
MsG0180006142.01.T01 MTR_1g018280 85.484 62 5 1 566 627 404 461 9.17e-24 105
MsG0180006142.01.T01 MTR_4g077700 25.817 612 338 25 57 601 19 581 1.04e-41 162
MsG0180006142.01.T01 MTR_4g122580 25.700 607 338 20 57 597 19 578 6.34e-39 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006142.01.T01 AT3G55400 70.189 634 143 5 1 617 1 605 0.0 902
MsG0180006142.01.T01 AT3G55400 72.830 530 114 3 1 515 1 515 0.0 799
MsG0180006142.01.T01 AT4G13780 24.792 601 344 21 57 596 20 573 3.25e-41 160

Find 194 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATGGCCGTATACCATTT+TGG 0.163191 1:+100650444 None:intergenic
CGACGCCATTGCTCGCTTTC+AGG 0.172482 1:-100653462 MsG0180006142.01.T01:intron
AACGATTTGGTTAGTAAGTT+TGG 0.200559 1:-100649138 MsG0180006142.01.T01:CDS
GAGATGGAAATAGGGTTTAT+TGG 0.220234 1:+100653622 None:intergenic
TTCCTCAGAGAGGTGGAATT+TGG 0.232008 1:-100649093 MsG0180006142.01.T01:CDS
ATAAGTGAAAATTCTTTCTT+AGG 0.235310 1:+100647730 None:intergenic
AGAAGAAGGGAGATGGAAAT+AGG 0.249938 1:+100653613 None:intergenic
TGGCAGGAAATCTTCTTAAT+AGG 0.253659 1:-100648861 MsG0180006142.01.T01:intron
TACGTTTCCATGCCGTTTAT+TGG 0.277442 1:-100650501 MsG0180006142.01.T01:CDS
TTTAATTTGATAGCGGCTAT+TGG 0.277602 1:-100653352 MsG0180006142.01.T01:intron
GAATCAGCTGGATGCATCTA+AGG 0.278513 1:-100653799 MsG0180006142.01.T01:five_prime_UTR
AAAGATGGCTGCACAAAGTT+TGG 0.304459 1:+100652225 None:intergenic
TTCCCGAGCATCCGTTGATT+GGG 0.310196 1:-100651435 MsG0180006142.01.T01:CDS
TTACGCAAATATTTATATAT+AGG 0.312895 1:-100647222 MsG0180006142.01.T01:three_prime_UTR
GTATGGTTTGATGCTTTACT+AGG 0.314469 1:-100651374 MsG0180006142.01.T01:CDS
TACGCTTGAACCAAACGATT+TGG 0.323345 1:-100649151 MsG0180006142.01.T01:CDS
ATCAGCTTGTGAGGCTGTTC+TGG 0.327249 1:-100648202 MsG0180006142.01.T01:CDS
TACCAAGTGGGGTGGACTTA+AGG 0.328656 1:-100647484 MsG0180006142.01.T01:CDS
GAAACGGTGTTTAGTAAATC+AGG 0.339575 1:+100651028 None:intergenic
CCCAGGTTGCTGCTTCAAAT+TGG 0.340068 1:+100647587 None:intergenic
TTTCCCGAGCATCCGTTGAT+TGG 0.340690 1:-100651436 MsG0180006142.01.T01:CDS
TGGGCTAAGCCTTCCCAAAA+TGG 0.344820 1:-100650458 MsG0180006142.01.T01:CDS
CGTTAACGCCCCTCCTCATA+TGG 0.346271 1:-100653510 MsG0180006142.01.T01:CDS
ATGCACAGCTTGGCTATTCC+AGG 0.357457 1:-100647612 MsG0180006142.01.T01:CDS
CCAGCTATGCTAATGTCTGC+TGG 0.359184 1:-100650478 MsG0180006142.01.T01:CDS
GAACTCAAGCTCGGAGTAAC+AGG 0.361149 1:+100647643 None:intergenic
ACCTTAAGCCTTGTGTTTCA+AGG 0.361855 1:-100652317 MsG0180006142.01.T01:CDS
ACGATTTGGTTAGTAAGTTT+GGG 0.362204 1:-100649137 MsG0180006142.01.T01:CDS
TTACTAAACACCGTTTCTTC+AGG 0.362225 1:-100651022 MsG0180006142.01.T01:CDS
TCCTTGAAACACAAGGCTTA+AGG 0.367680 1:+100652316 None:intergenic
CCAGCTACACTGCACTTGAT+TGG 0.385424 1:-100650995 MsG0180006142.01.T01:CDS
TTAATTTGATAGCGGCTATT+GGG 0.387680 1:-100653351 MsG0180006142.01.T01:intron
ACCAAGTGGGGTGGACTTAA+GGG 0.391465 1:-100647483 MsG0180006142.01.T01:CDS
CACAAGCTTACAAGACGCTT+TGG 0.398442 1:-100653224 MsG0180006142.01.T01:CDS
GAGGTGGAATTTGGCAATGA+TGG 0.400433 1:-100649084 MsG0180006142.01.T01:CDS
GAAGAAGGGAGATGGAAATA+GGG 0.400944 1:+100653614 None:intergenic
ATCAACGGATGCTCGGGAAA+TGG 0.401014 1:+100651439 None:intergenic
GTTGAGGTTGAGCCATGGCC+TGG 0.404063 1:+100647457 None:intergenic
AACTTACTAACCAAATCGTT+TGG 0.404070 1:+100649141 None:intergenic
AAGAAAGTTATATTCATTAC+CGG 0.407015 1:-100653327 MsG0180006142.01.T01:CDS
TAATGCTGGTAATTCCTATA+TGG 0.408560 1:-100648172 MsG0180006142.01.T01:CDS
TGTGAGGCTGTTCTGGAGAT+TGG 0.410328 1:-100648195 MsG0180006142.01.T01:CDS
AGCCTTCCCAAAATGGTATA+CGG 0.411499 1:-100650451 MsG0180006142.01.T01:CDS
CAGCCTCACAAGCTGATGTC+AGG 0.412097 1:+100648208 None:intergenic
AATAGGGTTTATTGGATTTG+AGG 0.414097 1:+100653630 None:intergenic
AGCAATGGCGTCGGCGGCGA+TGG 0.415306 1:+100653472 None:intergenic
CCAATCAAGTGCAGTGTAGC+TGG 0.425417 1:+100650995 None:intergenic
TGTCAGCTGTGAGGAATATA+AGG 0.426210 1:-100652642 MsG0180006142.01.T01:intron
CATTTACCGAGCTGATTATG+AGG 0.426407 1:-100652675 MsG0180006142.01.T01:CDS
TTGCAGAACAGAGCTGGTCT+TGG 0.428986 1:+100653590 None:intergenic
TGATTTACTAAGGGATGAAA+TGG 0.429092 1:+100653189 None:intergenic
ATTCCTTTACCTCGTGTAAA+CGG 0.431671 1:+100652202 None:intergenic
GCACATCTTGCCAATACAAT+TGG 0.438695 1:-100649024 MsG0180006142.01.T01:intron
TTCGTCATCATTTGAGGAAG+TGG 0.439070 1:+100653562 None:intergenic
CTCACCATGTTCATCGGTGC+CGG 0.442498 1:+100653308 None:intergenic
AGAGCTGGTCTTGGAGAAGA+AGG 0.442571 1:+100653599 None:intergenic
ACCAATTTGAAGCAGCAACC+TGG 0.444665 1:-100647588 MsG0180006142.01.T01:CDS
GCTCAAAGTACCAATTGTAT+TGG 0.446015 1:+100649014 None:intergenic
GCCCCAATCAACGGATGCTC+GGG 0.451436 1:+100651433 None:intergenic
ACTTAAGGGTGGCCAGGCCA+TGG 0.453301 1:-100647469 MsG0180006142.01.T01:CDS
TGAGTCTTGTCACTCGGAAC+AGG 0.454916 1:+100651407 None:intergenic
TTCACTTATGATGTTGGAGC+AGG 0.456474 1:-100647716 MsG0180006142.01.T01:CDS
AAACAAGCTCAAGAAGTTGT+TGG 0.459841 1:-100647345 MsG0180006142.01.T01:CDS
AGGGGCACGCTCATCCATAT+AGG 0.466606 1:+100648158 None:intergenic
TGCTGCTTCAAATTGGTCCC+TGG 0.467272 1:+100647594 None:intergenic
CCTCAGGCCACTATTGATCC+AGG 0.467562 1:+100651469 None:intergenic
AAACTGAAGTGGAAGACAAA+GGG 0.469002 1:-100647410 MsG0180006142.01.T01:CDS
AAGAAGACTCTGAAAAGTAA+AGG 0.472328 1:-100647375 MsG0180006142.01.T01:CDS
TAGCATAGCTGGCCAATAAA+CGG 0.473012 1:+100650489 None:intergenic
CCAGCAGACATTAGCATAGC+TGG 0.474341 1:+100650478 None:intergenic
GTCAAAATATCAGAAGTCAT+TGG 0.475950 1:-100652268 MsG0180006142.01.T01:CDS
TGCCCCAATCAACGGATGCT+CGG 0.476088 1:+100651432 None:intergenic
ACTATAACGATGATTTACTA+AGG 0.477876 1:+100653179 None:intergenic
GGATTTGAGGTGAGAAACAT+TGG 0.479677 1:+100653643 None:intergenic
AGAAGACTCTGAAAAGTAAA+GGG 0.482397 1:-100647374 MsG0180006142.01.T01:CDS
GCCTTGTGTTTCAAGGAAAG+AGG 0.485059 1:-100652310 MsG0180006142.01.T01:CDS
ATGTTAGGATGGTATGAAGA+TGG 0.485616 1:-100649190 MsG0180006142.01.T01:intron
AGGTGGAATTTGGCAATGAT+GGG 0.485834 1:-100649083 MsG0180006142.01.T01:CDS
AGGAACATAGTACATATGTA+TGG 0.486000 1:-100647202 MsG0180006142.01.T01:three_prime_UTR
CTCCCTGACATCAGCTTGTG+AGG 0.486304 1:-100648211 MsG0180006142.01.T01:CDS
TTAGTAAATCAGGTTGCTCC+TGG 0.489812 1:+100651038 None:intergenic
GAGTAAGCGCTGCCCATATG+AGG 0.492891 1:+100653497 None:intergenic
CAAGGACAATGTAGCGAGGC+TGG 0.493628 1:-100648761 MsG0180006142.01.T01:intron
ATTGGAACGAAGTGAAAGAA+TGG 0.493740 1:+100653661 None:intergenic
GGGTGGACTTAAGGGTGGCC+AGG 0.494372 1:-100647475 MsG0180006142.01.T01:CDS
ATCCTAGCAAAGATTGGTTG+AGG 0.496658 1:+100647441 None:intergenic
GGCTCAAGGTTCCACCCCTA+CGG 0.496674 1:-100653265 MsG0180006142.01.T01:CDS
TGCAGAAGGAAATGCATTCA+AGG 0.496773 1:-100648779 MsG0180006142.01.T01:CDS
TGTTAGGATGGTATGAAGAT+GGG 0.497162 1:-100649189 MsG0180006142.01.T01:intron
AATCCACTGCCAGTGTTGAT+TGG 0.502097 1:+100648812 None:intergenic
AAAAGACCATCTGAATCAGC+TGG 0.504522 1:-100653811 None:intergenic
GTAGGGTTCGTCATCATTTG+AGG 0.505930 1:+100653556 None:intergenic
CTGCCAATCAACACTGGCAG+TGG 0.507171 1:-100648815 MsG0180006142.01.T01:CDS
GCAACTGCTGCCGTGGCTCA+AGG 0.510640 1:-100653279 MsG0180006142.01.T01:CDS
ACCCTTAAGTCCACCCCACT+TGG 0.511818 1:+100647482 None:intergenic
AGACTCAGACTATATATGTA+TGG 0.517740 1:-100651391 MsG0180006142.01.T01:CDS
CTATTTGATGCAGGATGAGA+AGG 0.520213 1:-100652370 MsG0180006142.01.T01:intron
TGAGATTGCAATGGTCCGTA+GGG 0.524472 1:+100653250 None:intergenic
AGCTGGCCAACCTGAAGAAA+CGG 0.524943 1:+100651012 None:intergenic
TATGGTTTGATGCTTTACTA+GGG 0.525816 1:-100651373 MsG0180006142.01.T01:intron
TAAACACCGTTTCTTCAGGT+TGG 0.526746 1:-100651018 MsG0180006142.01.T01:CDS
AATCTTCTTAATAGGACTCT+AGG 0.528211 1:-100648853 MsG0180006142.01.T01:CDS
GTTCAAACCTGGATCAATAG+TGG 0.530179 1:-100651476 MsG0180006142.01.T01:CDS
CCTTGGTCTCTCTTTAAGCA+AGG 0.530338 1:-100648138 MsG0180006142.01.T01:CDS
CAGCTATGCTAATGTCTGCT+GGG 0.530697 1:-100650477 MsG0180006142.01.T01:CDS
GTTCTGGAGATTGGTAATGC+TGG 0.538081 1:-100648186 MsG0180006142.01.T01:CDS
AATGGCGTCGGCGGCGATGG+TGG 0.539434 1:+100653475 None:intergenic
GAGCATTTGCAGAACAGAGC+TGG 0.542714 1:+100653584 None:intergenic
CCCAAAATGGTATACGGCCA+TGG 0.542751 1:-100650445 MsG0180006142.01.T01:CDS
GATTCCACGGTGGCTGCAGA+AGG 0.543559 1:-100648793 MsG0180006142.01.T01:CDS
TGCTTCTGAAGCAGCTGCCA+AGG 0.545752 1:-100648109 MsG0180006142.01.T01:intron
TCCCGAGCATCCGTTGATTG+GGG 0.545821 1:-100651434 MsG0180006142.01.T01:CDS
GTCTTGGAGAAGAAGGGAGA+TGG 0.547721 1:+100653606 None:intergenic
ATGAAGATGGGCAAGTCACT+AGG 0.550900 1:-100649177 MsG0180006142.01.T01:CDS
ATATGGATGAGCGTGCCCCT+TGG 0.551543 1:-100648155 MsG0180006142.01.T01:CDS
AGCTCGGTAAATGTCACCAT+TGG 0.558279 1:+100652685 None:intergenic
CTGTCTCTAATATAATTACA+AGG 0.560785 1:+100647692 None:intergenic
ATGAGATTGCAATGGTCCGT+AGG 0.561506 1:+100653249 None:intergenic
TATTCGAGAGTGCTTGCCAA+TGG 0.562606 1:-100652701 MsG0180006142.01.T01:CDS
AACAGGTATGCCCCAATCAA+CGG 0.565056 1:+100651424 None:intergenic
ACCTCGTGTAAACGGAAAGA+TGG 0.565307 1:+100652210 None:intergenic
AACCTCAACCAATCTTTGCT+AGG 0.565548 1:-100647443 MsG0180006142.01.T01:CDS
ATCAGCACTAGCTGATGACC+AGG 0.568431 1:-100651056 MsG0180006142.01.T01:CDS
ATACTTCTTCCTCAGAGAGG+TGG 0.569549 1:-100649100 MsG0180006142.01.T01:CDS
AAAGCGAGCAATGGCGTCGG+CGG 0.570755 1:+100653466 None:intergenic
ATTGCAATGGTCCGTAGGGG+TGG 0.570970 1:+100653254 None:intergenic
CCAATTTGAAGCAGCAACCT+GGG 0.571584 1:-100647587 MsG0180006142.01.T01:intron
GATTGAAAATCAAACTGAAG+TGG 0.574353 1:-100647421 MsG0180006142.01.T01:CDS
TCCTCTTTCCTTGAAACACA+AGG 0.575285 1:+100652309 None:intergenic
GGGGCGTTAACGTAGTAAAG+AGG 0.576539 1:+100653521 None:intergenic
TAAATTTCTAGGTTCAAACC+TGG 0.577775 1:-100651487 MsG0180006142.01.T01:intron
TTGAAACACAAGGCTTAAGG+TGG 0.578255 1:+100652319 None:intergenic
TACACTGCACTTGATTGGTA+AGG 0.579282 1:-100650990 MsG0180006142.01.T01:intron
TATATTCTCGAACTCAAGCT+CGG 0.581656 1:+100647634 None:intergenic
AAGAGGGGTTGTGATGACGT+AGG 0.584740 1:+100653538 None:intergenic
AGCGCTGCCCATATGAGGAG+GGG 0.586186 1:+100653502 None:intergenic
AATCAGCTGGATGCATCTAA+GGG 0.586435 1:-100653798 MsG0180006142.01.T01:five_prime_UTR
GTTAACGCCCCTCCTCATAT+GGG 0.587213 1:-100653509 MsG0180006142.01.T01:CDS
AAAATATCAGAAGTCATTGG+AGG 0.587646 1:-100652265 MsG0180006142.01.T01:CDS
GGGCGTTAACGTAGTAAAGA+GGG 0.589775 1:+100653522 None:intergenic
GGGAAATGGAAAAGTCCCTC+AGG 0.591961 1:+100651453 None:intergenic
GAAAATTGCAACTGCTGCCG+TGG 0.592158 1:-100653286 MsG0180006142.01.T01:CDS
ATACCTTCGTCAAGAATCCA+TGG 0.594060 1:+100650428 None:intergenic
AGCCTCACAAGCTGATGTCA+GGG 0.594895 1:+100648209 None:intergenic
AACATTAGGAAGCACACACA+GGG 0.595670 1:+100653766 None:intergenic
TCGAGAATATATGCACAGCT+TGG 0.599510 1:-100647622 MsG0180006142.01.T01:CDS
TAGCTGGCCAATAAACGGCA+TGG 0.600474 1:+100650494 None:intergenic
ACACAAGGCTTAAGGTGGAT+CGG 0.602973 1:+100652324 None:intergenic
CAAACTGAAGTGGAAGACAA+AGG 0.603151 1:-100647411 MsG0180006142.01.T01:CDS
ATTTACCGAGCTGATTATGA+GGG 0.603837 1:-100652674 MsG0180006142.01.T01:CDS
CCTTGCTTAAAGAGAGACCA+AGG 0.604022 1:+100648138 None:intergenic
AAAGAACTGCCAATCAACAC+TGG 0.604833 1:-100648821 MsG0180006142.01.T01:CDS
CAAGCATGAAGCAATTGTGA+AGG 0.606448 1:-100652729 MsG0180006142.01.T01:CDS
CTGGATCAATAGTGGCCTGA+GGG 0.608588 1:-100651468 MsG0180006142.01.T01:CDS
AGGGGTGGAACCTTGAGCCA+CGG 0.609720 1:+100653269 None:intergenic
AGAGGGGTTGTGATGACGTA+GGG 0.611101 1:+100653539 None:intergenic
CTATAACGATGATTTACTAA+GGG 0.612769 1:+100653180 None:intergenic
AAGCGCTGCCCATATGAGGA+GGG 0.613611 1:+100653501 None:intergenic
AACACTGGCAGTGGATTCCA+CGG 0.615601 1:-100648806 MsG0180006142.01.T01:CDS
AAATTCCCTCATAATCAGCT+CGG 0.616005 1:+100652669 None:intergenic
TAAGCGCTGCCCATATGAGG+AGG 0.622703 1:+100653500 None:intergenic
ATTACCGGCACCGATGAACA+TGG 0.624333 1:-100653312 MsG0180006142.01.T01:CDS
GAGCTGGTCTTGGAGAAGAA+GGG 0.624359 1:+100653600 None:intergenic
TGCACAGCTTGGCTATTCCA+GGG 0.630460 1:-100647611 MsG0180006142.01.T01:CDS
GAAGACAAAGGGGTTGCAGT+CGG 0.633467 1:-100647399 MsG0180006142.01.T01:CDS
CTGAAAGCGAGCAATGGCGT+CGG 0.634768 1:+100653463 None:intergenic
GCCATCTTTCCGTTTACACG+AGG 0.638336 1:-100652211 MsG0180006142.01.T01:intron
AGGTACCTGAAAGCGAGCAA+TGG 0.639138 1:+100653457 None:intergenic
TAGAGAGATACCAAGTGGGG+TGG 0.641306 1:-100647492 MsG0180006142.01.T01:CDS
AACTGAAGTGGAAGACAAAG+GGG 0.642983 1:-100647409 MsG0180006142.01.T01:CDS
ATAGTCTGAGTCTTGTCACT+CGG 0.651357 1:+100651401 None:intergenic
CAATGATGGGGACTATTCAG+AGG 0.651752 1:-100649070 MsG0180006142.01.T01:CDS
GATTGGTTGAGGTTGAGCCA+TGG 0.658278 1:+100647452 None:intergenic
TGCCAAATTCCACCTCTCTG+AGG 0.662782 1:+100649091 None:intergenic
ATTGTAGAGAGATACCAAGT+GGG 0.663995 1:-100647496 MsG0180006142.01.T01:intron
TGGTCTCTCTTTAAGCAAGG+AGG 0.665745 1:-100648135 MsG0180006142.01.T01:CDS
CATTGTAGAGAGATACCAAG+TGG 0.666340 1:-100647497 MsG0180006142.01.T01:intron
CTTGCTTAAAGAGAGACCAA+GGG 0.666502 1:+100648139 None:intergenic
TAGATACTTCTTCCTCAGAG+AGG 0.671329 1:-100649103 MsG0180006142.01.T01:CDS
GGTGGAATTTGGCAATGATG+GGG 0.671855 1:-100649082 MsG0180006142.01.T01:CDS
CCTGGATCAATAGTGGCCTG+AGG 0.674293 1:-100651469 MsG0180006142.01.T01:CDS
AATTTATTGTGTCAGCTGTG+AGG 0.678267 1:-100652651 MsG0180006142.01.T01:CDS
GGCGTTAACGTAGTAAAGAG+GGG 0.684483 1:+100653523 None:intergenic
AGTAACAGGAGATAGTGCAA+TGG 0.702926 1:+100647657 None:intergenic
TTGTAGAGAGATACCAAGTG+GGG 0.703831 1:-100647495 MsG0180006142.01.T01:intron
CGGCCATGGATTCTTGACGA+AGG 0.712399 1:-100650431 MsG0180006142.01.T01:intron
TTGCTTAAAGAGAGACCAAG+GGG 0.714060 1:+100648140 None:intergenic
CATTCAAGGACAATGTAGCG+AGG 0.714076 1:-100648765 MsG0180006142.01.T01:CDS
AAGTGGGGTGGACTTAAGGG+TGG 0.714266 1:-100647480 MsG0180006142.01.T01:CDS
GAGATTGCAATGGTCCGTAG+GGG 0.717593 1:+100653251 None:intergenic
ATTTCCTTCTGCAGCCACCG+TGG 0.736364 1:+100648789 None:intergenic
CTTGTGAAATGAGATTGCAA+TGG 0.748586 1:+100653241 None:intergenic
ACATTAGGAAGCACACACAG+GGG 0.765019 1:+100653767 None:intergenic
ACTGGCAGTGGATTCCACGG+TGG 0.777092 1:-100648803 MsG0180006142.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATAAAGCATTA+AGG + Chr1:100651367-100651386 None:intergenic 10.0%
!!! GTTTTCTTTAATAATTTATT+TGG - Chr1:100649427-100649446 MsG0180006142.01.T01:intron 10.0%
!!! TATTATATTTAATTTGATAG+CGG - Chr1:100647601-100647620 MsG0180006142.01.T01:CDS 10.0%
!! AAAAAAATATGAAAGAAAAG+AGG + Chr1:100650003-100650022 None:intergenic 15.0%
!! AAACAAAAATAATTCAGAAT+AGG + Chr1:100653657-100653676 None:intergenic 15.0%
!! AACAAAAATAATTCAGAATA+GGG + Chr1:100653656-100653675 None:intergenic 15.0%
!! AGAAACATAAGATAATAAAT+AGG + Chr1:100650569-100650588 None:intergenic 15.0%
!! CAATGATTAATAACTATAAA+GGG + Chr1:100650343-100650362 None:intergenic 15.0%
!! TAAAAGTTATTATCTAACTT+TGG - Chr1:100647568-100647587 MsG0180006142.01.T01:intron 15.0%
!! TAAGAAACTTAAAAGAAAAA+AGG + Chr1:100648535-100648554 None:intergenic 15.0%
!! TATAATGCTACAAATATTAT+TGG + Chr1:100652990-100653009 None:intergenic 15.0%
!! TGAAATCTAATTTAATCATT+TGG - Chr1:100649199-100649218 MsG0180006142.01.T01:intron 15.0%
!! TTACGCAAATATTTATATAT+AGG - Chr1:100653738-100653757 MsG0180006142.01.T01:intron 15.0%
!! TTTCTTCTATATAAATTTCT+AGG - Chr1:100649462-100649481 MsG0180006142.01.T01:intron 15.0%
!!! AAAAGAGTTAATGAAAATTT+TGG + Chr1:100648121-100648140 None:intergenic 15.0%
!!! ATAACTATTTCATTTTTGTT+AGG + Chr1:100652493-100652512 None:intergenic 15.0%
!!! CTTTTTATTTTGAAAATGTT+AGG - Chr1:100651755-100651774 MsG0180006142.01.T01:intron 15.0%
!!! TAATTCCTTTTTATTTTCTA+TGG - Chr1:100650148-100650167 MsG0180006142.01.T01:intron 15.0%
!!! TTTTCATTAAAATGATTTTG+TGG - Chr1:100649063-100649082 MsG0180006142.01.T01:CDS 15.0%
!!! TTTTTAAAGATACTACTATT+AGG + Chr1:100651070-100651089 None:intergenic 15.0%
!! AACATTATCATTATCATCAT+CGG - Chr1:100649688-100649707 MsG0180006142.01.T01:intron 20.0%
!! AAGAAAGTTATATTCATTAC+CGG - Chr1:100647633-100647652 MsG0180006142.01.T01:CDS 20.0%
!! AATTTGATCAAATATCAATC+AGG + Chr1:100653051-100653070 None:intergenic 20.0%
!! AGATGAAAAGAAGAAAAATA+TGG - Chr1:100652367-100652386 MsG0180006142.01.T01:intron 20.0%
!! ATAAGTGAAAATTCTTTCTT+AGG + Chr1:100653233-100653252 None:intergenic 20.0%
!! ATAATCTTAACAAGTTTACA+AGG + Chr1:100651565-100651584 None:intergenic 20.0%
!! ATAGATCCAAATTCAATAAA+TGG + Chr1:100650994-100651013 None:intergenic 20.0%
!! ATTAATGTGAGAAAAGAAAA+AGG + Chr1:100653092-100653111 None:intergenic 20.0%
!! ATTATAAAAGATAGATTCTG+TGG - Chr1:100653004-100653023 MsG0180006142.01.T01:intron 20.0%
!! CAAGTTCATTATTTCATTAA+TGG - Chr1:100650413-100650432 MsG0180006142.01.T01:intron 20.0%
!! CCAATGATTAATAACTATAA+AGG + Chr1:100650344-100650363 None:intergenic 20.0%
!! CCTTTATAGTTATTAATCAT+TGG - Chr1:100650341-100650360 MsG0180006142.01.T01:intron 20.0%
!! GTTTATGTAATATATGTTCT+AGG + Chr1:100652883-100652902 None:intergenic 20.0%
!! TATTTCTCACTTAAAAGAAA+AGG + Chr1:100650085-100650104 None:intergenic 20.0%
!! TGAAAACTATAAACTAAACT+TGG - Chr1:100651666-100651685 MsG0180006142.01.T01:intron 20.0%
!! TTCATTCCATTTATTGAATT+TGG - Chr1:100650985-100651004 MsG0180006142.01.T01:intron 20.0%
!!! AAACAATCTGAATTTTGATT+TGG - Chr1:100649273-100649292 MsG0180006142.01.T01:intron 20.0%
!!! ACCATATTTTTAGTTCAATA+CGG + Chr1:100650705-100650724 None:intergenic 20.0%
!!! AGTAAAAGTAATTTGATAGT+TGG - Chr1:100651641-100651660 MsG0180006142.01.T01:intron 20.0%
!!! ATAGCAATTTTGTAAATTTG+AGG + Chr1:100647838-100647857 None:intergenic 20.0%
!!! TAGCAATTTTGTAAATTTGA+GGG + Chr1:100647837-100647856 None:intergenic 20.0%
!!! TGATACATTTTTAGTAAAGA+TGG - Chr1:100648003-100648022 MsG0180006142.01.T01:intron 20.0%
!!! TGATCAATATTTACTTTTGT+AGG - Chr1:100652695-100652714 MsG0180006142.01.T01:CDS 20.0%
!!! TGTAAACTTGTTAAGATTAT+CGG - Chr1:100651565-100651584 MsG0180006142.01.T01:intron 20.0%
!!! TTATTTTGAAAATGTTAGGA+TGG - Chr1:100651759-100651778 MsG0180006142.01.T01:intron 20.0%
! AACTTCATACACTAAAATGT+TGG - Chr1:100652900-100652919 MsG0180006142.01.T01:intron 25.0%
! AATAATGAACTTGAATGCTT+TGG + Chr1:100650406-100650425 None:intergenic 25.0%
! ACCGTATTGAACTAAAAATA+TGG - Chr1:100650701-100650720 MsG0180006142.01.T01:intron 25.0%
! ACTATAACGATGATTTACTA+AGG + Chr1:100647784-100647803 None:intergenic 25.0%
! ATACAAGATCTTTACTTAGA+AGG - Chr1:100648398-100648417 MsG0180006142.01.T01:intron 25.0%
! ATACATTAAGTGATCGAATT+CGG + Chr1:100649239-100649258 None:intergenic 25.0%
! ATGATTCAAATTGATAGAGT+AGG - Chr1:100648934-100648953 MsG0180006142.01.T01:intron 25.0%
! ATGCTTATTATACTTGGTTA+AGG + Chr1:100653164-100653183 None:intergenic 25.0%
! ATTATGCACGATTATTTGTA+TGG - Chr1:100649751-100649770 MsG0180006142.01.T01:intron 25.0%
! CATTTCTTGTAAATAAGAGA+CGG + Chr1:100650633-100650652 None:intergenic 25.0%
! CCAAACCATAGAAAATAAAA+AGG + Chr1:100650156-100650175 None:intergenic 25.0%
! CTATAACGATGATTTACTAA+GGG + Chr1:100647783-100647802 None:intergenic 25.0%
! CTGTCTCTAATATAATTACA+AGG + Chr1:100653271-100653290 None:intergenic 25.0%
! GAAACAGATTTATAAGACTT+TGG + Chr1:100651706-100651725 None:intergenic 25.0%
! GTTATCTATCTTCCAAATAA+AGG + Chr1:100648469-100648488 None:intergenic 25.0%
! TAACATGAATACAACTTTCT+GGG + Chr1:100652450-100652469 None:intergenic 25.0%
! TACAAGATCTTTACTTAGAA+GGG - Chr1:100648399-100648418 MsG0180006142.01.T01:intron 25.0%
! TCTATTTACCATCCTTTATT+TGG - Chr1:100648454-100648473 MsG0180006142.01.T01:intron 25.0%
! TGACATTACTTCTTAAATTC+TGG - Chr1:100651501-100651520 MsG0180006142.01.T01:intron 25.0%
! TGCTTATTATACTTGGTTAA+GGG + Chr1:100653163-100653182 None:intergenic 25.0%
! TGGAATATGCTTATTATACT+TGG + Chr1:100653170-100653189 None:intergenic 25.0%
! TTATCTTATGTTTCTTCTTG+AGG - Chr1:100650574-100650593 MsG0180006142.01.T01:intron 25.0%
! TTATGACAAGTGGATAAAAA+TGG + Chr1:100650182-100650201 None:intergenic 25.0%
!! AAGCATTATTCCACTATTTT+TGG + Chr1:100649335-100649354 None:intergenic 25.0%
!! AAGTGAGAGTTAATCAATTT+TGG + Chr1:100649130-100649149 None:intergenic 25.0%
!! AGAATTTTCACTTATGATGT+TGG - Chr1:100653238-100653257 MsG0180006142.01.T01:CDS 25.0%
!! ATTGACGTTCTTTGATTTAT+GGG - Chr1:100648036-100648055 MsG0180006142.01.T01:intron 25.0%
!! CTTAAATTCTGGTTAAAATG+TGG - Chr1:100651512-100651531 MsG0180006142.01.T01:intron 25.0%
!! GTTTTTACAATCTTCTATAC+CGG + Chr1:100649098-100649117 None:intergenic 25.0%
!! TAATCAATTTTGGATGCTAT+TGG + Chr1:100649120-100649139 None:intergenic 25.0%
!! TTTTGGTCCTCAAAATTTTA+GGG + Chr1:100648104-100648123 None:intergenic 25.0%
!! TTTTTACAATCTTCTATACC+GGG + Chr1:100649097-100649116 None:intergenic 25.0%
!!! AGAAAAAGGTGTTTAGTATT+TGG + Chr1:100653078-100653097 None:intergenic 25.0%
!!! AGCATTATTCCACTATTTTT+GGG + Chr1:100649334-100649353 None:intergenic 25.0%
!!! ATTTTGGTCCTCAAAATTTT+AGG + Chr1:100648105-100648124 None:intergenic 25.0%
!!! CCTTTTTATTTTCTATGGTT+TGG - Chr1:100650153-100650172 MsG0180006142.01.T01:intron 25.0%
!!! TAGTTTTACATTACAGAAGT+TGG + Chr1:100653683-100653702 None:intergenic 25.0%
!!! TATTGAGCTCTTATTTTCTA+AGG + Chr1:100651413-100651432 None:intergenic 25.0%
!!! TTTATATGCTTTTCAAGTCT+TGG - Chr1:100648980-100648999 MsG0180006142.01.T01:intron 25.0%
AAAATATCAGAAGTCATTGG+AGG - Chr1:100648695-100648714 MsG0180006142.01.T01:intron 30.0%
AAACGAAAAGAAGTGACATA+TGG + Chr1:100653190-100653209 None:intergenic 30.0%
AACCATCACAAAAATACAGA+TGG + Chr1:100650312-100650331 None:intergenic 30.0%
AACCATTGTAGATAAGTTGT+GGG - Chr1:100652651-100652670 MsG0180006142.01.T01:CDS 30.0%
AACTTACTAACCAAATCGTT+TGG + Chr1:100651822-100651841 None:intergenic 30.0%
AATAGGGTTTATTGGATTTG+AGG + Chr1:100647333-100647352 None:intergenic 30.0%
AATCTTCTTAATAGGACTCT+AGG - Chr1:100652107-100652126 MsG0180006142.01.T01:intron 30.0%
AATTACAGAAACACAATCCA+AGG + Chr1:100652600-100652619 None:intergenic 30.0%
AGACTCAGACTATATATGTA+TGG - Chr1:100649569-100649588 MsG0180006142.01.T01:intron 30.0%
AGGAACATAGTACATATGTA+TGG - Chr1:100653758-100653777 MsG0180006142.01.T01:intron 30.0%
ATTACAGAAACACAATCCAA+GGG + Chr1:100652599-100652618 None:intergenic 30.0%
ATTTACAAGAAATGCTGAGT+AGG - Chr1:100650639-100650658 MsG0180006142.01.T01:intron 30.0%
ATTTACCATCACAAGTTTAG+AGG - Chr1:100647904-100647923 MsG0180006142.01.T01:intron 30.0%
GATTGAAAATCAAACTGAAG+TGG - Chr1:100653539-100653558 MsG0180006142.01.T01:CDS 30.0%
GTAACATGAATACAACTTTC+TGG + Chr1:100652451-100652470 None:intergenic 30.0%
GTAAGAAATGTAACAGATAG+AGG + Chr1:100648825-100648844 None:intergenic 30.0%
GTATCAAAAGTTCAAAACCA+CGG + Chr1:100647989-100648008 None:intergenic 30.0%
GTCAAAATATCAGAAGTCAT+TGG - Chr1:100648692-100648711 MsG0180006142.01.T01:intron 30.0%
TAAGAGAGAATTATGACAAG+TGG + Chr1:100650192-100650211 None:intergenic 30.0%
TAATGCTGGTAATTCCTATA+TGG - Chr1:100652788-100652807 MsG0180006142.01.T01:intron 30.0%
TAATGTCATGATGTAGAAGA+TGG + Chr1:100651489-100651508 None:intergenic 30.0%
TATCTACAATGGTTGAAAGA+TGG + Chr1:100652645-100652664 None:intergenic 30.0%
TATGGTTTGATGCTTTACTA+GGG - Chr1:100649587-100649606 MsG0180006142.01.T01:intron 30.0%
TCAATCAGGTAAAGATTTAG+TGG + Chr1:100653037-100653056 None:intergenic 30.0%
TCTATCTTCCAAATAAAGGA+TGG + Chr1:100648465-100648484 None:intergenic 30.0%
TCTGTTTAGATTGTCTTATC+CGG + Chr1:100652350-100652369 None:intergenic 30.0%
TGATTTACTAAGGGATGAAA+TGG + Chr1:100647774-100647793 None:intergenic 30.0%
TGTTACAAGCAATGAAAGTA+AGG + Chr1:100652007-100652026 None:intergenic 30.0%
TGTTCAACAAGAGTTTAGTA+AGG + Chr1:100649848-100649867 None:intergenic 30.0%
TTTACAGACATATGAGAGAT+TGG + Chr1:100650959-100650978 None:intergenic 30.0%
! AAGAAGACTCTGAAAAGTAA+AGG - Chr1:100653585-100653604 MsG0180006142.01.T01:CDS 30.0%
! AATTTTCTCACCATGTTCAT+CGG + Chr1:100647661-100647680 None:intergenic 30.0%
! AGAACTATTTGAAGTTCTAG+AGG + Chr1:100648437-100648456 None:intergenic 30.0%
! AGAAGACTCTGAAAAGTAAA+GGG - Chr1:100653586-100653605 MsG0180006142.01.T01:CDS 30.0%
! ATAGCCTTTTCCTAGTATTT+GGG + Chr1:100650223-100650242 None:intergenic 30.0%
! ATTCTGGTTAAAATGTGGTT+AGG - Chr1:100651517-100651536 MsG0180006142.01.T01:intron 30.0%
! CAAAACCTCTTTCACTATTT+TGG - Chr1:100652079-100652098 MsG0180006142.01.T01:intron 30.0%
! CAACTTAGATAGATCGTTTT+AGG - Chr1:100652394-100652413 MsG0180006142.01.T01:intron 30.0%
! CACAAAAATACAGATGGATT+TGG + Chr1:100650306-100650325 None:intergenic 30.0%
! GATTGACGTTCTTTGATTTA+TGG - Chr1:100648035-100648054 MsG0180006142.01.T01:intron 30.0%
! GGAATACATTTGAAGCATTA+CGG + Chr1:100651392-100651411 None:intergenic 30.0%
! TAAATTTCTAGGTTCAAACC+TGG - Chr1:100649473-100649492 MsG0180006142.01.T01:intron 30.0%
! TTCTGGTTAAAATGTGGTTA+GGG - Chr1:100651518-100651537 MsG0180006142.01.T01:intron 30.0%
! TTTTCAATCCTAGCAAAGAT+TGG + Chr1:100653528-100653547 None:intergenic 30.0%
!! AACGATTTGGTTAGTAAGTT+TGG - Chr1:100651822-100651841 MsG0180006142.01.T01:intron 30.0%
!! AATGTATTGCTATTTGATGC+AGG - Chr1:100648581-100648600 MsG0180006142.01.T01:intron 30.0%
!! ACGATTTGGTTAGTAAGTTT+GGG - Chr1:100651823-100651842 MsG0180006142.01.T01:intron 30.0%
!! ATAAAACTTGCTAACACTGT+TGG + Chr1:100651444-100651463 None:intergenic 30.0%
!! ATATGTCACTTCTTTTCGTT+TGG - Chr1:100653189-100653208 MsG0180006142.01.T01:CDS 30.0%
!! ATCCATCTGTATTTTTGTGA+TGG - Chr1:100650307-100650326 MsG0180006142.01.T01:intron 30.0%
!! GTTGTACTCATAACTTGTTA+AGG - Chr1:100650112-100650131 MsG0180006142.01.T01:intron 30.0%
!! TATGTCACTTCTTTTCGTTT+GGG - Chr1:100653190-100653209 MsG0180006142.01.T01:CDS 30.0%
!! TCATAACTTGTTAAGGTAGA+AGG - Chr1:100650119-100650138 MsG0180006142.01.T01:intron 30.0%
!! TTAATTTGATAGCGGCTATT+GGG - Chr1:100647609-100647628 MsG0180006142.01.T01:CDS 30.0%
!! TTTAATTTGATAGCGGCTAT+TGG - Chr1:100647608-100647627 MsG0180006142.01.T01:CDS 30.0%
!!! GCATTATTCCACTATTTTTG+GGG + Chr1:100649333-100649352 None:intergenic 30.0%
!!! TAATGGTTTTGTTACTCTGT+AGG - Chr1:100650430-100650449 MsG0180006142.01.T01:intron 30.0%
AAACAAGCTCAAGAAGTTGT+TGG - Chr1:100653615-100653634 MsG0180006142.01.T01:CDS 35.0%
AAACTGAAGTGGAAGACAAA+GGG - Chr1:100653550-100653569 MsG0180006142.01.T01:CDS 35.0%
AAAGCTAATAGAATAGAGCC+AGG + Chr1:100649656-100649675 None:intergenic 35.0%
AAATTCCCTCATAATCAGCT+CGG + Chr1:100648294-100648313 None:intergenic 35.0%
AACTGCATATCATCTCTTTC+AGG - Chr1:100649390-100649409 MsG0180006142.01.T01:intron 35.0%
AAGCTAATAGAATAGAGCCA+GGG + Chr1:100649655-100649674 None:intergenic 35.0%
AATAAAACGAGAATGCTGCT+CGG - Chr1:100650925-100650944 MsG0180006142.01.T01:intron 35.0%
AATTTATTGTGTCAGCTGTG+AGG - Chr1:100648309-100648328 MsG0180006142.01.T01:intron 35.0%
ACCTATTATCTAACTTCCGT+GGG - Chr1:100647522-100647541 MsG0180006142.01.T01:intron 35.0%
AGACATATGAGAGATTGGAA+TGG + Chr1:100650954-100650973 None:intergenic 35.0%
AGCTGCACATACAAAAAGAA+AGG + Chr1:100649880-100649899 None:intergenic 35.0%
AGTCAAAATCTCGTTCTACT+CGG - Chr1:100650254-100650273 MsG0180006142.01.T01:intron 35.0%
ATGTTAGGATGGTATGAAGA+TGG - Chr1:100651770-100651789 MsG0180006142.01.T01:intron 35.0%
ATTCCTTTACCTCGTGTAAA+CGG + Chr1:100648761-100648780 None:intergenic 35.0%
ATTGGAACGAAGTGAAAGAA+TGG + Chr1:100647302-100647321 None:intergenic 35.0%
ATTGTAGAGAGATACCAAGT+GGG - Chr1:100653464-100653483 MsG0180006142.01.T01:CDS 35.0%
ATTTACCGAGCTGATTATGA+GGG - Chr1:100648286-100648305 MsG0180006142.01.T01:intron 35.0%
CAACCATTGTAGATAAGTTG+TGG - Chr1:100652650-100652669 MsG0180006142.01.T01:CDS 35.0%
CTTACATACTGCAATTCAAG+CGG - Chr1:100648840-100648859 MsG0180006142.01.T01:CDS 35.0%
CTTGTGAAATGAGATTGCAA+TGG + Chr1:100647722-100647741 None:intergenic 35.0%
CTTTCAGGAGAACTTCAAAT+GGG - Chr1:100649405-100649424 MsG0180006142.01.T01:intron 35.0%
GAAACGGTGTTTAGTAAATC+AGG + Chr1:100649935-100649954 None:intergenic 35.0%
GAGATGGAAATAGGGTTTAT+TGG + Chr1:100647341-100647360 None:intergenic 35.0%
GGCTACTCAAGTAAAACATT+AGG - Chr1:100647958-100647977 MsG0180006142.01.T01:intron 35.0%
GTATGGTTTGATGCTTTACT+AGG - Chr1:100649586-100649605 MsG0180006142.01.T01:intron 35.0%
TAAAACATTAGGTCTTTCCG+TGG - Chr1:100647969-100647988 MsG0180006142.01.T01:intron 35.0%
TACCTATTATCTAACTTCCG+TGG - Chr1:100647521-100647540 MsG0180006142.01.T01:intron 35.0%
TAGAACCTCTAAACTTGTGA+TGG + Chr1:100647912-100647931 None:intergenic 35.0%
TATAGTCAACCCCAAATACT+AGG - Chr1:100650210-100650229 MsG0180006142.01.T01:intron 35.0%
TATATTCTCGAACTCAAGCT+CGG + Chr1:100653329-100653348 None:intergenic 35.0%
TATGTAGTTACACGACCTTA+AGG + Chr1:100649042-100649061 None:intergenic 35.0%
TCGTGAAATACCTATATCAC+AGG + Chr1:100649371-100649390 None:intergenic 35.0%
TCTTTCAGGAGAACTTCAAA+TGG - Chr1:100649404-100649423 MsG0180006142.01.T01:intron 35.0%
TGCATGATTGAAAACTGAAG+TGG + Chr1:100650836-100650855 None:intergenic 35.0%
TGGCAGGAAATCTTCTTAAT+AGG - Chr1:100652099-100652118 MsG0180006142.01.T01:intron 35.0%
TGTTACAAGCAATGAAAGCA+AGG + Chr1:100651971-100651990 None:intergenic 35.0%
TGTTAGGATGGTATGAAGAT+GGG - Chr1:100651771-100651790 MsG0180006142.01.T01:intron 35.0%
TTAAGTGATCGAATTCGGAT+TGG + Chr1:100649234-100649253 None:intergenic 35.0%
TTACACGAGGTAAAGGAATA+TGG - Chr1:100648762-100648781 MsG0180006142.01.T01:CDS 35.0%
TTACATACTGCAATTCAAGC+GGG - Chr1:100648841-100648860 MsG0180006142.01.T01:CDS 35.0%
TTACTAAACACCGTTTCTTC+AGG - Chr1:100649938-100649957 MsG0180006142.01.T01:intron 35.0%
TTGATCAACCTTTGTGTTAC+AGG + Chr1:100652682-100652701 None:intergenic 35.0%
TTTGAGGGACTAAATTGATG+AGG + Chr1:100647822-100647841 None:intergenic 35.0%
! ACTTCAGTTTTCAATCATGC+AGG - Chr1:100650835-100650854 MsG0180006142.01.T01:intron 35.0%
! GATAGCCTTTTCCTAGTATT+TGG + Chr1:100650224-100650243 None:intergenic 35.0%
! GCTCAAAGTACCAATTGTAT+TGG + Chr1:100651949-100651968 None:intergenic 35.0%
! TAGCCTTTTCCTAGTATTTG+GGG + Chr1:100650222-100650241 None:intergenic 35.0%
! TGTACAGTTCACAATGGTTT+TGG + Chr1:100650792-100650811 None:intergenic 35.0%
!! TATGTTCTAGGAGAATACCT+TGG + Chr1:100652871-100652890 None:intergenic 35.0%
!! TTGACGAAGGTATTAGTACT+CGG - Chr1:100650542-100650561 MsG0180006142.01.T01:intron 35.0%
!! TTTGCTGTTTCGTAAAATCG+AGG - Chr1:100648064-100648083 MsG0180006142.01.T01:intron 35.0%
!!! AAGGTGATAGTTTTAACTCG+AGG - Chr1:100648337-100648356 MsG0180006142.01.T01:intron 35.0%
!!! AATTTTAGGGTGGAGCAATT+TGG + Chr1:100648091-100648110 None:intergenic 35.0%
!!! AGTTCACAATGGTTTTGGTT+TGG + Chr1:100650787-100650806 None:intergenic 35.0%
AAAGAACTGCCAATCAACAC+TGG - Chr1:100652139-100652158 MsG0180006142.01.T01:intron 40.0%
AAAGATGGCTGCACAAAGTT+TGG + Chr1:100648738-100648757 None:intergenic 40.0%
AACCTCAACCAATCTTTGCT+AGG - Chr1:100653517-100653536 MsG0180006142.01.T01:CDS 40.0%
AACTGAAGTGGAAGACAAAG+GGG - Chr1:100653551-100653570 MsG0180006142.01.T01:CDS 40.0%
AATCAGCTGGATGCATCTAA+GGG - Chr1:100647162-100647181 MsG0180006142.01.T01:three_prime_UTR 40.0%
ACCCACGGAAGTTAGATAAT+AGG + Chr1:100647526-100647545 None:intergenic 40.0%
ACTTGGATTGACATGCTTTC+AGG - Chr1:100651295-100651314 MsG0180006142.01.T01:intron 40.0%
AGAAGAAGGGAGATGGAAAT+AGG + Chr1:100647350-100647369 None:intergenic 40.0%
AGCAGTTTCACCTGTGATAT+AGG - Chr1:100649358-100649377 MsG0180006142.01.T01:intron 40.0%
AGCCTTCCCAAAATGGTATA+CGG - Chr1:100650509-100650528 MsG0180006142.01.T01:CDS 40.0%
AGGAGGCAGCATCAAAAAAA+TGG - Chr1:100647240-100647259 MsG0180006142.01.T01:three_prime_UTR 40.0%
AGGTGGAATTTGGCAATGAT+GGG - Chr1:100651877-100651896 MsG0180006142.01.T01:intron 40.0%
AGTAACAGGAGATAGTGCAA+TGG + Chr1:100653306-100653325 None:intergenic 40.0%
ATAAAACAAGCCTACCGACA+AGG + Chr1:100649164-100649183 None:intergenic 40.0%
ATACCTTCGTCAAGAATCCA+TGG + Chr1:100650535-100650554 None:intergenic 40.0%
ATGAATACAACTTTCTGGGC+AGG + Chr1:100652446-100652465 None:intergenic 40.0%
CAAACTGAAGTGGAAGACAA+AGG - Chr1:100653549-100653568 MsG0180006142.01.T01:CDS 40.0%
CAACCCCAAATACTAGGAAA+AGG - Chr1:100650216-100650235 MsG0180006142.01.T01:intron 40.0%
CAAGCATGAAGCAATTGTGA+AGG - Chr1:100648231-100648250 MsG0180006142.01.T01:CDS 40.0%
CATTGTAGAGAGATACCAAG+TGG - Chr1:100653463-100653482 MsG0180006142.01.T01:CDS 40.0%
CATTTACCGAGCTGATTATG+AGG - Chr1:100648285-100648304 MsG0180006142.01.T01:intron 40.0%
CTATTTGATGCAGGATGAGA+AGG - Chr1:100648590-100648609 MsG0180006142.01.T01:intron 40.0%
CTCCCACAACTTATCTACAA+TGG + Chr1:100652656-100652675 None:intergenic 40.0%
CTTGCTTAAAGAGAGACCAA+GGG + Chr1:100652824-100652843 None:intergenic 40.0%
GAAGAAACCAAACAAACCCA+CGG + Chr1:100647541-100647560 None:intergenic 40.0%
GAAGAAGGGAGATGGAAATA+GGG + Chr1:100647349-100647368 None:intergenic 40.0%
GAAGTGGTAATTGAGCAGTT+CGG + Chr1:100650820-100650839 None:intergenic 40.0%
GCACATCTTGCCAATACAAT+TGG - Chr1:100651936-100651955 MsG0180006142.01.T01:intron 40.0%
GTGCTTCCTAATGTTATCTG+CGG - Chr1:100647202-100647221 MsG0180006142.01.T01:three_prime_UTR 40.0%
GTTCAAACCTGGATCAATAG+TGG - Chr1:100649484-100649503 MsG0180006142.01.T01:intron 40.0%
GTTTAGATTGTCTTATCCGG+TGG + Chr1:100652347-100652366 None:intergenic 40.0%
TAAAACAAGCCTACCGACAA+GGG + Chr1:100649163-100649182 None:intergenic 40.0%
TAAACACCGTTTCTTCAGGT+TGG - Chr1:100649942-100649961 MsG0180006142.01.T01:intron 40.0%
TAACCTCAAACTGCTGCATA+AGG + Chr1:100652281-100652300 None:intergenic 40.0%
TAAGATAGAGAGAGATACCC+AGG + Chr1:100653393-100653412 None:intergenic 40.0%
TACACTGCACTTGATTGGTA+AGG - Chr1:100649970-100649989 MsG0180006142.01.T01:intron 40.0%
TACGCTTGAACCAAACGATT+TGG - Chr1:100651809-100651828 MsG0180006142.01.T01:intron 40.0%
TAGATACTTCTTCCTCAGAG+AGG - Chr1:100651857-100651876 MsG0180006142.01.T01:intron 40.0%
TAGCATAGCTGGCCAATAAA+CGG + Chr1:100650474-100650493 None:intergenic 40.0%
TCACTGCTTCTTTGTTGCAT+TGG - Chr1:100651270-100651289 MsG0180006142.01.T01:intron 40.0%
TCCTCTTTCCTTGAAACACA+AGG + Chr1:100648654-100648673 None:intergenic 40.0%
TCCTGCCAAAATAGTGAAAG+AGG + Chr1:100652087-100652106 None:intergenic 40.0%
TCCTTGAAACACAAGGCTTA+AGG + Chr1:100648647-100648666 None:intergenic 40.0%
TCGAGAATATATGCACAGCT+TGG - Chr1:100653338-100653357 MsG0180006142.01.T01:CDS 40.0%
TCTTTCCCGCAGATAACATT+AGG + Chr1:100647211-100647230 None:intergenic 40.0%
TGAACAGTCTCTAGTGAATG+TGG + Chr1:100648900-100648919 None:intergenic 40.0%
TGAATACAACTTTCTGGGCA+GGG + Chr1:100652445-100652464 None:intergenic 40.0%
TGCAGAAGGAAATGCATTCA+AGG - Chr1:100652181-100652200 MsG0180006142.01.T01:intron 40.0%
TGCTTCCTAATGTTATCTGC+GGG - Chr1:100647203-100647222 MsG0180006142.01.T01:three_prime_UTR 40.0%
TGGTTAAAATGTGGTTAGGG+TGG - Chr1:100651521-100651540 MsG0180006142.01.T01:intron 40.0%
TGTCAGCTGTGAGGAATATA+AGG - Chr1:100648318-100648337 MsG0180006142.01.T01:intron 40.0%
TGTTATCTGCGGGAAAGAAA+CGG - Chr1:100647213-100647232 MsG0180006142.01.T01:three_prime_UTR 40.0%
TTAAAATGTGGTTAGGGTGG+TGG - Chr1:100651524-100651543 MsG0180006142.01.T01:intron 40.0%
TTCACTTATGATGTTGGAGC+AGG - Chr1:100653244-100653263 MsG0180006142.01.T01:CDS 40.0%
TTCGTCATCATTTGAGGAAG+TGG + Chr1:100647401-100647420 None:intergenic 40.0%
TTGAAACACAAGGCTTAAGG+TGG + Chr1:100648644-100648663 None:intergenic 40.0%
TTGACATGCTTTCAGGCTAT+TGG - Chr1:100651302-100651321 MsG0180006142.01.T01:intron 40.0%
TTGCTTAAAGAGAGACCAAG+GGG + Chr1:100652823-100652842 None:intergenic 40.0%
TTGTAGAGAGATACCAAGTG+GGG - Chr1:100653465-100653484 MsG0180006142.01.T01:CDS 40.0%
TTTCCGTTTACACGAGGTAA+AGG - Chr1:100648755-100648774 MsG0180006142.01.T01:intron 40.0%
! AACATTAGGAAGCACACACA+GGG + Chr1:100647197-100647216 None:intergenic 40.0%
! ACCTTAAGCCTTGTGTTTCA+AGG - Chr1:100648643-100648662 MsG0180006142.01.T01:intron 40.0%
! AGACTTTGGTTAGTCACAGA+AGG + Chr1:100651692-100651711 None:intergenic 40.0%
! ATAGTCTGAGTCTTGTCACT+CGG + Chr1:100649562-100649581 None:intergenic 40.0%
! ATCCTAGCAAAGATTGGTTG+AGG + Chr1:100653522-100653541 None:intergenic 40.0%
! CCTGAACTTTGAAGGAAACT+GGG - Chr1:100651128-100651147 MsG0180006142.01.T01:intron 40.0%
! CTTTTTCTGTCTTCCCTTGT+CGG - Chr1:100649147-100649166 MsG0180006142.01.T01:CDS 40.0%
! GATTTTGTGGTCATACATCC+CGG - Chr1:100649076-100649095 MsG0180006142.01.T01:CDS 40.0%
! GGATTTGAGGTGAGAAACAT+TGG + Chr1:100647320-100647339 None:intergenic 40.0%
! TAACATTAGGAAGCACACAC+AGG + Chr1:100647198-100647217 None:intergenic 40.0%
! TACGTTTCCATGCCGTTTAT+TGG - Chr1:100650459-100650478 MsG0180006142.01.T01:CDS 40.0%
! TCCTGAACTTTGAAGGAAAC+TGG - Chr1:100651127-100651146 MsG0180006142.01.T01:intron 40.0%
! TGAAAGCATGTCAATCCAAG+TGG + Chr1:100651296-100651315 None:intergenic 40.0%
! TGCTCCACCCTAAAATTTTG+AGG - Chr1:100648094-100648113 MsG0180006142.01.T01:intron 40.0%
! TTAGGGTGGTGGTATATGAT+TGG - Chr1:100651535-100651554 MsG0180006142.01.T01:intron 40.0%
! TTAGTAAATCAGGTTGCTCC+TGG + Chr1:100649925-100649944 None:intergenic 40.0%
!! ATTTTTGGGGAAGCATGCAT+GGG + Chr1:100649320-100649339 None:intergenic 40.0%
!! GTTTGGTGTACAGTTCACAA+TGG + Chr1:100650798-100650817 None:intergenic 40.0%
!! GTTTTGATGCAGCAAGAGAT+CGG - Chr1:100647937-100647956 MsG0180006142.01.T01:intron 40.0%
!! TGACGAAGGTATTAGTACTC+GGG - Chr1:100650543-100650562 MsG0180006142.01.T01:intron 40.0%
!! TGGTCCTCAAAATTTTAGGG+TGG + Chr1:100648101-100648120 None:intergenic 40.0%
!!! ACCTCTTTCACTATTTTGGC+AGG - Chr1:100652083-100652102 MsG0180006142.01.T01:intron 40.0%
!!! TATTTTTGGGGAAGCATGCA+TGG + Chr1:100649321-100649340 None:intergenic 40.0%
AACAGGTATGCCCCAATCAA+CGG + Chr1:100649539-100649558 None:intergenic 45.0%
ACACAAGGCTTAAGGTGGAT+CGG + Chr1:100648639-100648658 None:intergenic 45.0%
ACCTCGTGTAAACGGAAAGA+TGG + Chr1:100648753-100648772 None:intergenic 45.0%
ACTGCCTCTCAATCTGATGA+TGG - Chr1:100648487-100648506 MsG0180006142.01.T01:intron 45.0%
AGCTCGGTAAATGTCACCAT+TGG + Chr1:100648278-100648297 None:intergenic 45.0%
AGTTCATCGCACAATTGCAG+CGG + Chr1:100650747-100650766 None:intergenic 45.0%
ATACTTCTTCCTCAGAGAGG+TGG - Chr1:100651860-100651879 MsG0180006142.01.T01:intron 45.0%
ATGAAGATGGGCAAGTCACT+AGG - Chr1:100651783-100651802 MsG0180006142.01.T01:intron 45.0%
ATGAGATTGCAATGGTCCGT+AGG + Chr1:100647714-100647733 None:intergenic 45.0%
ATGCCTTATGCAGCAGTTTG+AGG - Chr1:100652275-100652294 MsG0180006142.01.T01:CDS 45.0%
CAACCAGTTAGCACTCCTTA+AGG - Chr1:100649024-100649043 MsG0180006142.01.T01:intron 45.0%
CAACGACTCCTGAACTTTGA+AGG - Chr1:100651120-100651139 MsG0180006142.01.T01:intron 45.0%
CACAAGCTTACAAGACGCTT+TGG - Chr1:100647736-100647755 MsG0180006142.01.T01:CDS 45.0%
CAGCTATGCTAATGTCTGCT+GGG - Chr1:100650483-100650502 MsG0180006142.01.T01:CDS 45.0%
CATTCAAGGACAATGTAGCG+AGG - Chr1:100652195-100652214 MsG0180006142.01.T01:intron 45.0%
CCCAGTTTCCTTCAAAGTTC+AGG + Chr1:100651131-100651150 None:intergenic 45.0%
CCTGTTCATGGTTCAGTCAT+GGG - Chr1:100650662-100650681 MsG0180006142.01.T01:intron 45.0%
CCTTGCTTAAAGAGAGACCA+AGG + Chr1:100652825-100652844 None:intergenic 45.0%
CCTTGGTCTCTCTTTAAGCA+AGG - Chr1:100652822-100652841 MsG0180006142.01.T01:intron 45.0%
CTGCCTCTCAATCTGATGAT+GGG - Chr1:100648488-100648507 MsG0180006142.01.T01:intron 45.0%
GAACAGAACAAACTGACCCT+TGG - Chr1:100652580-100652599 MsG0180006142.01.T01:intron 45.0%
GAATCAGCTGGATGCATCTA+AGG - Chr1:100647161-100647180 MsG0180006142.01.T01:three_prime_UTR 45.0%
GACAGACACTGTTGCGTTAA+GGG + Chr1:100647866-100647885 None:intergenic 45.0%
GAGGTGGAATTTGGCAATGA+TGG - Chr1:100651876-100651895 MsG0180006142.01.T01:intron 45.0%
GCAATTGTGCGATGAACTGT+CGG - Chr1:100650749-100650768 MsG0180006142.01.T01:intron 45.0%
GCATGCTTCCCCAAAAATAG+TGG - Chr1:100649322-100649341 MsG0180006142.01.T01:intron 45.0%
GCCTTGTGTTTCAAGGAAAG+AGG - Chr1:100648650-100648669 MsG0180006142.01.T01:intron 45.0%
GGCGTTAACGTAGTAAAGAG+GGG + Chr1:100647440-100647459 None:intergenic 45.0%
GGGCGTTAACGTAGTAAAGA+GGG + Chr1:100647441-100647460 None:intergenic 45.0%
GGTAATTGAGCAGTTCGGTT+TGG + Chr1:100650815-100650834 None:intergenic 45.0%
GGTGGAATTTGGCAATGATG+GGG - Chr1:100651878-100651897 MsG0180006142.01.T01:intron 45.0%
GTAGGGTTCGTCATCATTTG+AGG + Chr1:100647407-100647426 None:intergenic 45.0%
GTGGCAGGTGAATTAAACAC+AGG + Chr1:100652328-100652347 None:intergenic 45.0%
GTGTTTAATTCACCTGCCAC+CGG - Chr1:100652328-100652347 MsG0180006142.01.T01:CDS 45.0%
TCTACTCGGTAATCTCCATC+TGG - Chr1:100650268-100650287 MsG0180006142.01.T01:intron 45.0%
TCTCCCATCATCAGATTGAG+AGG + Chr1:100648494-100648513 None:intergenic 45.0%
TGAGATTGCAATGGTCCGTA+GGG + Chr1:100647713-100647732 None:intergenic 45.0%
TGGTCTCTCTTTAAGCAAGG+AGG - Chr1:100652825-100652844 MsG0180006142.01.T01:intron 45.0%
TGGTGTGTAAGTACTCCAGA+TGG + Chr1:100650286-100650305 None:intergenic 45.0%
TGTGCATCTCTAACTTTCCC+TGG - Chr1:100649635-100649654 MsG0180006142.01.T01:intron 45.0%
TTCCTCAGAGAGGTGGAATT+TGG - Chr1:100651867-100651886 MsG0180006142.01.T01:intron 45.0%
! ACATTAGGAAGCACACACAG+GGG + Chr1:100647196-100647215 None:intergenic 45.0%
! ACCAATTTGAAGCAGCAACC+TGG - Chr1:100653372-100653391 MsG0180006142.01.T01:intron 45.0%
! CAATGATGGGGACTATTCAG+AGG - Chr1:100651890-100651909 MsG0180006142.01.T01:intron 45.0%
! CCAATTTGAAGCAGCAACCT+GGG - Chr1:100653373-100653392 MsG0180006142.01.T01:intron 45.0%
! CCATGGCCGTATACCATTTT+GGG + Chr1:100650518-100650537 None:intergenic 45.0%
! CTAACTTCCGTGGGTTTGTT+TGG - Chr1:100647531-100647550 MsG0180006142.01.T01:intron 45.0%
! TCCATGGCCGTATACCATTT+TGG + Chr1:100650519-100650538 None:intergenic 45.0%
! TCTTTGTTGCATTGGCCACT+TGG - Chr1:100651278-100651297 MsG0180006142.01.T01:intron 45.0%
!! AATCCACTGCCAGTGTTGAT+TGG + Chr1:100652151-100652170 None:intergenic 45.0%
!! CTTAAGGAGTGCTAACTGGT+TGG + Chr1:100649026-100649045 None:intergenic 45.0%
!! GTTCTGGAGATTGGTAATGC+TGG - Chr1:100652774-100652793 MsG0180006142.01.T01:intron 45.0%
!! TATTCGAGAGTGCTTGCCAA+TGG - Chr1:100648259-100648278 MsG0180006142.01.T01:intron 45.0%
!!! TATCTTTAAAAAATAATTAT+CGG - Chr1:100651078-100651097 MsG0180006142.01.T01:intron 5.0%
AGATTGTCTTATCCGGTGGC+AGG + Chr1:100652343-100652362 None:intergenic 50.0%
AGCCTCACAAGCTGATGTCA+GGG + Chr1:100652754-100652773 None:intergenic 50.0%
AGCTGGCCAACCTGAAGAAA+CGG + Chr1:100649951-100649970 None:intergenic 50.0%
AGGTACCTGAAAGCGAGCAA+TGG + Chr1:100647506-100647525 None:intergenic 50.0%
ATCAACGGATGCTCGGGAAA+TGG + Chr1:100649524-100649543 None:intergenic 50.0%
ATCAGCACTAGCTGATGACC+AGG - Chr1:100649904-100649923 MsG0180006142.01.T01:intron 50.0%
ATCAGCTTGTGAGGCTGTTC+TGG - Chr1:100652758-100652777 MsG0180006142.01.T01:CDS 50.0%
ATCGCACAATTGCAGCGGTT+TGG + Chr1:100650742-100650761 None:intergenic 50.0%
ATGCACAGCTTGGCTATTCC+AGG - Chr1:100653348-100653367 MsG0180006142.01.T01:intron 50.0%
ATGCTGAGTAGGCCTGTTCA+TGG - Chr1:100650650-100650669 MsG0180006142.01.T01:intron 50.0%
CCAATCAAGTGCAGTGTAGC+TGG + Chr1:100649968-100649987 None:intergenic 50.0%
CCAGCAGACATTAGCATAGC+TGG + Chr1:100650485-100650504 None:intergenic 50.0%
CCAGCTACACTGCACTTGAT+TGG - Chr1:100649965-100649984 MsG0180006142.01.T01:intron 50.0%
CCAGCTATGCTAATGTCTGC+TGG - Chr1:100650482-100650501 MsG0180006142.01.T01:CDS 50.0%
CCCAAAATGGTATACGGCCA+TGG - Chr1:100650515-100650534 MsG0180006142.01.T01:intron 50.0%
CCCATGACTGAACCATGAAC+AGG + Chr1:100650665-100650684 None:intergenic 50.0%
CGACAGACACTGTTGCGTTA+AGG + Chr1:100647867-100647886 None:intergenic 50.0%
CTGGATCAATAGTGGCCTGA+GGG - Chr1:100649492-100649511 MsG0180006142.01.T01:intron 50.0%
GAAAATTGCAACTGCTGCCG+TGG - Chr1:100647674-100647693 MsG0180006142.01.T01:CDS 50.0%
GAACTCAAGCTCGGAGTAAC+AGG + Chr1:100653320-100653339 None:intergenic 50.0%
GAAGACAAAGGGGTTGCAGT+CGG - Chr1:100653561-100653580 MsG0180006142.01.T01:CDS 50.0%
GAGATTGCAATGGTCCGTAG+GGG + Chr1:100647712-100647731 None:intergenic 50.0%
GAGCATTTGCAGAACAGAGC+TGG + Chr1:100647379-100647398 None:intergenic 50.0%
GCCATCTTTCCGTTTACACG+AGG - Chr1:100648749-100648768 MsG0180006142.01.T01:intron 50.0%
GCCTGTTCATGGTTCAGTCA+TGG - Chr1:100650661-100650680 MsG0180006142.01.T01:intron 50.0%
GGGAAATGGAAAAGTCCCTC+AGG + Chr1:100649510-100649529 None:intergenic 50.0%
GTCTTGGAGAAGAAGGGAGA+TGG + Chr1:100647357-100647376 None:intergenic 50.0%
GTTAACGCCCCTCCTCATAT+GGG - Chr1:100647451-100647470 MsG0180006142.01.T01:CDS 50.0%
TAGAGAGATACCAAGTGGGG+TGG - Chr1:100653468-100653487 MsG0180006142.01.T01:CDS 50.0%
TAGCGAGGCTGGTAAAGTCT+AGG - Chr1:100652210-100652229 MsG0180006142.01.T01:intron 50.0%
TAGCTGGCCAATAAACGGCA+TGG + Chr1:100650469-100650488 None:intergenic 50.0%
TCAACCGTGTGCTCAATGCT+AGG + Chr1:100651330-100651349 None:intergenic 50.0%
TGCACAGCTTGGCTATTCCA+GGG - Chr1:100653349-100653368 MsG0180006142.01.T01:intron 50.0%
TGCCAAATTCCACCTCTCTG+AGG + Chr1:100651872-100651891 None:intergenic 50.0%
TGGGCTAAGCCTTCCCAAAA+TGG - Chr1:100650502-100650521 MsG0180006142.01.T01:CDS 50.0%
TTCTGTCTTCCCTTGTCGGT+AGG - Chr1:100649151-100649170 MsG0180006142.01.T01:CDS 50.0%
TTTCCCGAGCATCCGTTGAT+TGG - Chr1:100649524-100649543 MsG0180006142.01.T01:intron 50.0%
! AACACTGGCAGTGGATTCCA+CGG - Chr1:100652154-100652173 MsG0180006142.01.T01:intron 50.0%
! AAGAGGGGTTGTGATGACGT+AGG + Chr1:100647425-100647444 None:intergenic 50.0%
! ACCAAGTGGGGTGGACTTAA+GGG - Chr1:100653477-100653496 MsG0180006142.01.T01:CDS 50.0%
! AGAGGGGTTGTGATGACGTA+GGG + Chr1:100647424-100647443 None:intergenic 50.0%
! CCCAGGTTGCTGCTTCAAAT+TGG + Chr1:100653376-100653395 None:intergenic 50.0%
! GATTGGTTGAGGTTGAGCCA+TGG + Chr1:100653511-100653530 None:intergenic 50.0%
! GGGGCGTTAACGTAGTAAAG+AGG + Chr1:100647442-100647461 None:intergenic 50.0%
! TACCAAGTGGGGTGGACTTA+AGG - Chr1:100653476-100653495 MsG0180006142.01.T01:CDS 50.0%
! TGAGTCTTGTCACTCGGAAC+AGG + Chr1:100649556-100649575 None:intergenic 50.0%
! TGCTGCTTCAAATTGGTCCC+TGG + Chr1:100653369-100653388 None:intergenic 50.0%
! TTCCCGAGCATCCGTTGATT+GGG - Chr1:100649525-100649544 MsG0180006142.01.T01:intron 50.0%
! TTGCAGAACAGAGCTGGTCT+TGG + Chr1:100647373-100647392 None:intergenic 50.0%
!! AGAGCTGGTCTTGGAGAAGA+AGG + Chr1:100647364-100647383 None:intergenic 50.0%
!! ATTACCGGCACCGATGAACA+TGG - Chr1:100647648-100647667 MsG0180006142.01.T01:CDS 50.0%
!! CGACCTTAAGGAGTGCTAAC+TGG + Chr1:100649030-100649049 None:intergenic 50.0%
!! GAGCTGGTCTTGGAGAAGAA+GGG + Chr1:100647363-100647382 None:intergenic 50.0%
!! GGCCGTATACCATTTTGGGA+AGG + Chr1:100650514-100650533 None:intergenic 50.0%
!! TGTGAGGCTGTTCTGGAGAT+TGG - Chr1:100652765-100652784 MsG0180006142.01.T01:CDS 50.0%
ACCCTTAAGTCCACCCCACT+TGG + Chr1:100653481-100653500 None:intergenic 55.0%
ATATGGATGAGCGTGCCCCT+TGG - Chr1:100652805-100652824 MsG0180006142.01.T01:intron 55.0%
ATTGCAATGGTCCGTAGGGG+TGG + Chr1:100647709-100647728 None:intergenic 55.0%
ATTTCCTTCTGCAGCCACCG+TGG + Chr1:100652174-100652193 None:intergenic 55.0%
CAAGGACAATGTAGCGAGGC+TGG - Chr1:100652199-100652218 MsG0180006142.01.T01:intron 55.0%
CAGCCTCACAAGCTGATGTC+AGG + Chr1:100652755-100652774 None:intergenic 55.0%
CCTCAGGCCACTATTGATCC+AGG + Chr1:100649494-100649513 None:intergenic 55.0%
CCTGGATCAATAGTGGCCTG+AGG - Chr1:100649491-100649510 MsG0180006142.01.T01:intron 55.0%
CGGCCATGGATTCTTGACGA+AGG - Chr1:100650529-100650548 MsG0180006142.01.T01:intron 55.0%
CGTTAACGCCCCTCCTCATA+TGG - Chr1:100647450-100647469 MsG0180006142.01.T01:CDS 55.0%
CTCACCATGTTCATCGGTGC+CGG + Chr1:100647655-100647674 None:intergenic 55.0%
CTCCCTGACATCAGCTTGTG+AGG - Chr1:100652749-100652768 MsG0180006142.01.T01:CDS 55.0%
CTGAAAGCGAGCAATGGCGT+CGG + Chr1:100647500-100647519 None:intergenic 55.0%
CTGCCAATCAACACTGGCAG+TGG - Chr1:100652145-100652164 MsG0180006142.01.T01:intron 55.0%
GGGAAAGAAACGGCTTGAGG+AGG - Chr1:100647223-100647242 MsG0180006142.01.T01:three_prime_UTR 55.0%
GGGAGCTGCCTGTAACACAA+AGG - Chr1:100652671-100652690 MsG0180006142.01.T01:CDS 55.0%
TGCCCCAATCAACGGATGCT+CGG + Chr1:100649531-100649550 None:intergenic 55.0%
TGCGGGAAAGAAACGGCTTG+AGG - Chr1:100647220-100647239 MsG0180006142.01.T01:three_prime_UTR 55.0%
! AAGCGCTGCCCATATGAGGA+GGG + Chr1:100647462-100647481 None:intergenic 55.0%
! AAGTGGGGTGGACTTAAGGG+TGG - Chr1:100653480-100653499 MsG0180006142.01.T01:CDS 55.0%
! AGGGGCACGCTCATCCATAT+AGG + Chr1:100652805-100652824 None:intergenic 55.0%
! GAGTAAGCGCTGCCCATATG+AGG + Chr1:100647466-100647485 None:intergenic 55.0%
! GGCACCTAGCATTGAGCACA+CGG - Chr1:100651323-100651342 MsG0180006142.01.T01:intron 55.0%
! TAAGCGCTGCCCATATGAGG+AGG + Chr1:100647463-100647482 None:intergenic 55.0%
! TCCCGAGCATCCGTTGATTG+GGG - Chr1:100649526-100649545 MsG0180006142.01.T01:intron 55.0%
! TTGGGGAAGCATGCATGGGT+GGG + Chr1:100649316-100649335 None:intergenic 55.0%
! TTTGGGGAAGCATGCATGGG+TGG + Chr1:100649317-100649336 None:intergenic 55.0%
!! TGCTTCTGAAGCAGCTGCCA+AGG - Chr1:100652851-100652870 MsG0180006142.01.T01:intron 55.0%
ACTTAAGGGTGGCCAGGCCA+TGG - Chr1:100653491-100653510 MsG0180006142.01.T01:CDS 60.0%
AGCGCTGCCCATATGAGGAG+GGG + Chr1:100647461-100647480 None:intergenic 60.0%
AGGGGTGGAACCTTGAGCCA+CGG + Chr1:100647694-100647713 None:intergenic 60.0%
CGACGCCATTGCTCGCTTTC+AGG - Chr1:100647498-100647517 MsG0180006142.01.T01:intron 60.0%
GATTCCACGGTGGCTGCAGA+AGG - Chr1:100652167-100652186 MsG0180006142.01.T01:intron 60.0%
GCCCCAATCAACGGATGCTC+GGG + Chr1:100649530-100649549 None:intergenic 60.0%
GGCTCAAGGTTCCACCCCTA+CGG - Chr1:100647695-100647714 MsG0180006142.01.T01:CDS 60.0%
GTTGAGGTTGAGCCATGGCC+TGG + Chr1:100653506-100653525 None:intergenic 60.0%
! AAAGCGAGCAATGGCGTCGG+CGG + Chr1:100647497-100647516 None:intergenic 60.0%
! ACTGGCAGTGGATTCCACGG+TGG - Chr1:100652157-100652176 MsG0180006142.01.T01:intron 60.0%
! TGGGGAAGCATGCATGGGTG+GGG + Chr1:100649315-100649334 None:intergenic 60.0%
GCAACTGCTGCCGTGGCTCA+AGG - Chr1:100647681-100647700 MsG0180006142.01.T01:CDS 65.0%
! GGGTGGACTTAAGGGTGGCC+AGG - Chr1:100653485-100653504 MsG0180006142.01.T01:CDS 65.0%
!! AATGGCGTCGGCGGCGATGG+TGG + Chr1:100647488-100647507 None:intergenic 70.0%
!! AGCAATGGCGTCGGCGGCGA+TGG + Chr1:100647491-100647510 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 100647159 100653823 100647159 ID=MsG0180006142.01;Name=MsG0180006142.01
Chr1 mRNA 100647159 100653823 100647159 ID=MsG0180006142.01.T01;Parent=MsG0180006142.01;Name=MsG0180006142.01.T01;_AED=0.35;_eAED=0.36;_QI=53|0.83|0.76|1|0.91|0.84|13|179|627
Chr1 exon 100647159 100647511 100647159 ID=MsG0180006142.01.T01:exon:11630;Parent=MsG0180006142.01.T01
Chr1 exon 100647588 100647758 100647588 ID=MsG0180006142.01.T01:exon:11629;Parent=MsG0180006142.01.T01
Chr1 exon 100648110 100648265 100648110 ID=MsG0180006142.01.T01:exon:11628;Parent=MsG0180006142.01.T01
Chr1 exon 100648762 100648877 100648762 ID=MsG0180006142.01.T01:exon:11627;Parent=MsG0180006142.01.T01
Chr1 exon 100649025 100649205 100649025 ID=MsG0180006142.01.T01:exon:11626;Parent=MsG0180006142.01.T01
Chr1 exon 100650432 100650530 100650432 ID=MsG0180006142.01.T01:exon:11625;Parent=MsG0180006142.01.T01
Chr1 exon 100650991 100651084 100650991 ID=MsG0180006142.01.T01:exon:11624;Parent=MsG0180006142.01.T01
Chr1 exon 100651374 100651498 100651374 ID=MsG0180006142.01.T01:exon:11623;Parent=MsG0180006142.01.T01
Chr1 exon 100652212 100652379 100652212 ID=MsG0180006142.01.T01:exon:11622;Parent=MsG0180006142.01.T01
Chr1 exon 100652643 100652788 100652643 ID=MsG0180006142.01.T01:exon:11621;Parent=MsG0180006142.01.T01
Chr1 exon 100653169 100653361 100653169 ID=MsG0180006142.01.T01:exon:11620;Parent=MsG0180006142.01.T01
Chr1 exon 100653463 100653733 100653463 ID=MsG0180006142.01.T01:exon:11619;Parent=MsG0180006142.01.T01
Chr1 exon 100653781 100653823 100653781 ID=MsG0180006142.01.T01:exon:11618;Parent=MsG0180006142.01.T01
Chr1 five_prime_UTR 100653781 100653823 100653781 ID=MsG0180006142.01.T01:five_prime_utr;Parent=MsG0180006142.01.T01
Chr1 five_prime_UTR 100653724 100653733 100653724 ID=MsG0180006142.01.T01:five_prime_utr;Parent=MsG0180006142.01.T01
Chr1 CDS 100653463 100653723 100653463 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100653169 100653361 100653169 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100652643 100652788 100652643 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100652212 100652379 100652212 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100651374 100651498 100651374 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100650991 100651084 100650991 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100650432 100650530 100650432 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100649025 100649205 100649025 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100648762 100648877 100648762 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100648110 100648265 100648110 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100647588 100647758 100647588 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 CDS 100647338 100647511 100647338 ID=MsG0180006142.01.T01:cds;Parent=MsG0180006142.01.T01
Chr1 three_prime_UTR 100647159 100647337 100647159 ID=MsG0180006142.01.T01:three_prime_utr;Parent=MsG0180006142.01.T01
Gene Sequence

>MsG0180006142.01.T01

ATGGCAGTGAGAATGAACTGTTCGTTGCAGAACACACTCTCCATTCTTTCACTTCGTTCCAATGTTTCTCACCTCAAATCCAATAAACCCTATTTCCATCTCCCTTCTTCTCCAAGACCAGCTCTGTTCTGCAAATGCTCCACTTCCTCAAATGATGACGAACCCTACGTCATCACAACCCCTCTTTACTACGTTAACGCCCCTCCTCATATGGGCAGCGCTTACTCCACCATCGCCGCCGACGCCATTGCTCGCTTTCAGCGGCTATTGGGAAAGAAAGTTATATTCATTACCGGCACCGATGAACATGGTGAGAAAATTGCAACTGCTGCCGTGGCTCAAGGTTCCACCCCTACGGACCATTGCAATCTCATTTCACAAGCTTACAAGACGCTTTGGAATGATGTAATTCCATTTCATCCCTTAGTAAATCATCGTTATAGTCGTTTATACTATATTTCGTACGATAAGTTCATTAGAACAACAGATAGCAAGCATGAAGCAATTGTGAAGGAATTTTATTCGAGAGTGCTTGCCAATGGTGACATTTACCGAGCTGATTATGAGGGAATTTATTGTGTCAGCTGTGAGGAATATAAGGATGAGAAGGAACTGCTTGAAAATAATTGTTGTCCGATCCACCTTAAGCCTTGTGTTTCAAGGAAAGAGGACAATTATTTTTTCGCACTGTCAAAATATCAGAAGTCATTGGAGGAAATTTTGAATAAAAATCCAAACTTTGTGCAGCCATCTTTCCGTTTACACGAGGTTCAAACCTGGATCAATAGTGGCCTGAGGGACTTTTCCATTTCCCGAGCATCCGTTGATTGGGGCATACCTGTTCCGAGTGACAAGACTCAGACTATATATGTATGGTTTGATGCTTTACTAGGCTACATATCAGCACTAGCTGATGACCAGGAGCAACCTGATTTACTAAACACCGTTTCTTCAGGTTGGCCAGCTACACTGCACTTGATTGGTAAGGATATTCTACGTTTCCATGCCGTTTATTGGCCAGCTATGCTAATGTCTGCTGGGCTAAGCCTTCCCAAAATGGTATACGGCCATGGATTCTTGACGAAGGATGGTATGAAGATGGGCAAGTCACTAGGAAATACGCTTGAACCAAACGATTTGGTTAGTAAGTTTGGGACAGATGCAGTTAGATACTTCTTCCTCAGAGAGGTGGAATTTGGCAATGATGGGGACTATTCAGAGGAACGCTTCATCAATATTGTAAATGCACATCTTGCCAATACAATTGGAAATCTTCTTAATAGGACTCTAGGACTTCTGAAAAAGAACTGCCAATCAACACTGGCAGTGGATTCCACGGTGGCTGCAGAAGGAAATGCATTCAAGGACAATGTAGCGAGGCTGGTTGATAAAGCTCATATGCACTATGAAAATCTCTCCCTGACATCAGCTTGTGAGGCTGTTCTGGAGATTGGTAATGCTGGTAATTCCTATATGGATGAGCGTGCCCCTTGGTCTCTCTTTAAGCAAGGAGGTACTGCTTCTGAAGCAGCTGCCAAGCAAATGCCTAAGAAAGAATTTTCACTTATGATGTTGGAGCAGGACCTTGTAATTATATTAGAGACAGTGAGAATTATTGCCATTGCACTATCTCCTGTTACTCCGAGCTTGAGTTCGAGAATATATGCACAGCTTGGCTATTCCAGGGACCAATTTGAAGCAGCAACCTGGAGAGATACCAAGTGGGGTGGACTTAAGGGTGGCCAGGCCATGGCTCAACCTCAACCAATCTTTGCTAGGATTGAAAATCAAACTGAAGTGGAAGACAAAGGGGTTGCAGTCGGTAAGAAGACTCTGAAAAGTAAAGGGAAGTCGAAACAAGCTCAAGAAGTTGTTGGAGCTTAG

Protein sequence

>MsG0180006142.01.T01

MAVRMNCSLQNTLSILSLRSNVSHLKSNKPYFHLPSSPRPALFCKCSTSSNDDEPYVITTPLYYVNAPPHMGSAYSTIAADAIARFQRLLGKKVIFITGTDEHGEKIATAAVAQGSTPTDHCNLISQAYKTLWNDVIPFHPLVNHRYSRLYYISYDKFIRTTDSKHEAIVKEFYSRVLANGDIYRADYEGIYCVSCEEYKDEKELLENNCCPIHLKPCVSRKEDNYFFALSKYQKSLEEILNKNPNFVQPSFRLHEVQTWINSGLRDFSISRASVDWGIPVPSDKTQTIYVWFDALLGYISALADDQEQPDLLNTVSSGWPATLHLIGKDILRFHAVYWPAMLMSAGLSLPKMVYGHGFLTKDGMKMGKSLGNTLEPNDLVSKFGTDAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCQSTLAVDSTVAAEGNAFKDNVARLVDKAHMHYENLSLTSACEAVLEIGNAGNSYMDERAPWSLFKQGGTASEAAAKQMPKKEFSLMMLEQDLVIILETVRIIAIALSPVTPSLSSRIYAQLGYSRDQFEAATWRDTKWGGLKGGQAMAQPQPIFARIENQTEVEDKGVAVGKKTLKSKGKSKQAQEVVGA*