Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388990 | KEH18842.1 | 91.453 | 585 | 48 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1073 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388990 | sp|Q84JT7|ARID1_ARATH | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.38e-63 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388990 | A0A072TN61 | 91.453 | 585 | 48 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1073 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0388990 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0388990 | 0.823928 | 1.063374e-53 | -8.615850e-47 |
| Msa0002710 | Msa0388990 | 0.804731 | 1.876550e-49 | -8.615850e-47 |
| Msa0012940 | Msa0388990 | 0.855863 | 4.741243e-62 | -8.615850e-47 |
| Msa0017390 | Msa0388990 | 0.821947 | 3.078633e-53 | -8.615850e-47 |
| Msa0022550 | Msa0388990 | 0.804649 | 1.951864e-49 | -8.615850e-47 |
| Msa0022750 | Msa0388990 | -0.824441 | 8.057529e-54 | -8.615850e-47 |
| Msa0028930 | Msa0388990 | 0.800861 | 1.181420e-48 | -8.615850e-47 |
| Msa0035120 | Msa0388990 | 0.804274 | 2.337074e-49 | -8.615850e-47 |
| Msa0035130 | Msa0388990 | 0.806304 | 8.778904e-50 | -8.615850e-47 |
| Msa0036130 | Msa0388990 | 0.822191 | 2.703209e-53 | -8.615850e-47 |
| Msa0039250 | Msa0388990 | 0.831899 | 1.284776e-55 | -8.615850e-47 |
| Msa0041690 | Msa0388990 | 0.812191 | 4.799191e-51 | -8.615850e-47 |
| Msa0049790 | Msa0388990 | 0.815069 | 1.116336e-51 | -8.615850e-47 |
| Msa0051020 | Msa0388990 | 0.808629 | 2.820087e-50 | -8.615850e-47 |
| Msa0061340 | Msa0388990 | 0.802008 | 6.876730e-49 | -8.615850e-47 |
| Msa0062120 | Msa0388990 | 0.800754 | 1.242587e-48 | -8.615850e-47 |
| Msa0065550 | Msa0388990 | 0.811461 | 6.920488e-51 | -8.615850e-47 |
| Msa0081210 | Msa0388990 | 0.804693 | 1.911408e-49 | -8.615850e-47 |
| Msa0089980 | Msa0388990 | 0.803893 | 2.804327e-49 | -8.615850e-47 |
| Msa0090010 | Msa0388990 | 0.801780 | 7.662212e-49 | -8.615850e-47 |
| Msa0093850 | Msa0388990 | 0.828446 | 8.949361e-55 | -8.615850e-47 |
| Msa0097810 | Msa0388990 | 0.804513 | 2.084254e-49 | -8.615850e-47 |
| Msa0098470 | Msa0388990 | 0.822641 | 2.124974e-53 | -8.615850e-47 |
| Msa0100160 | Msa0388990 | 0.800054 | 1.725367e-48 | -8.615850e-47 |
| Msa0101270 | Msa0388990 | 0.808949 | 2.407977e-50 | -8.615850e-47 |
| Msa0106320 | Msa0388990 | 0.828667 | 7.913786e-55 | -8.615850e-47 |
| Msa0106620 | Msa0388990 | 0.859524 | 3.896123e-63 | -8.615850e-47 |
| Msa0106710 | Msa0388990 | 0.843932 | 1.033871e-58 | -8.615850e-47 |
| Msa0116790 | Msa0388990 | 0.809320 | 2.006091e-50 | -8.615850e-47 |
| Msa0127100 | Msa0388990 | 0.818093 | 2.346715e-52 | -8.615850e-47 |
| Msa0133720 | Msa0388990 | 0.831500 | 1.611634e-55 | -8.615850e-47 |
| Msa0133820 | Msa0388990 | 0.814351 | 1.610699e-51 | -8.615850e-47 |
| Msa0138360 | Msa0388990 | 0.823821 | 1.126837e-53 | -8.615850e-47 |
| Msa0138750 | Msa0388990 | 0.826405 | 2.763060e-54 | -8.615850e-47 |
| Msa0141400 | Msa0388990 | 0.813024 | 3.155526e-51 | -8.615850e-47 |
| Msa0144360 | Msa0388990 | 0.826258 | 2.994251e-54 | -8.615850e-47 |
| Msa0147980 | Msa0388990 | 0.827792 | 1.286566e-54 | -8.615850e-47 |
| Msa0152870 | Msa0388990 | 0.831408 | 1.698303e-55 | -8.615850e-47 |
| Msa0168870 | Msa0388990 | 0.836696 | 8.043074e-57 | -8.615850e-47 |
| Msa0173890 | Msa0388990 | 0.809422 | 1.907560e-50 | -8.615850e-47 |
| Msa0181230 | Msa0388990 | 0.840034 | 1.108589e-57 | -8.615850e-47 |
| Msa0188150 | Msa0388990 | 0.815451 | 9.183949e-52 | -8.615850e-47 |
| Msa0188690 | Msa0388990 | 0.801631 | 8.221364e-49 | -8.615850e-47 |
| Msa0197780 | Msa0388990 | 0.809081 | 2.256357e-50 | -8.615850e-47 |
| Msa0199420 | Msa0388990 | 0.812621 | 3.866570e-51 | -8.615850e-47 |
| Msa0206840 | Msa0388990 | 0.807264 | 5.503503e-50 | -8.615850e-47 |
| Msa0207350 | Msa0388990 | 0.815469 | 9.098248e-52 | -8.615850e-47 |
| Msa0229920 | Msa0388990 | 0.801757 | 7.745012e-49 | -8.615850e-47 |
| Msa0237210 | Msa0388990 | 0.826429 | 2.726912e-54 | -8.615850e-47 |
| Msa0372810 | Msa0388990 | 0.844276 | 8.357363e-59 | -8.615850e-47 |
| Msa0376280 | Msa0388990 | 0.804166 | 2.460826e-49 | -8.615850e-47 |
| Msa0378720 | Msa0388990 | 0.808909 | 2.455956e-50 | -8.615850e-47 |
| Msa0378970 | Msa0388990 | 0.830674 | 2.571716e-55 | -8.615850e-47 |
| Msa0388990 | Msa0394690 | 0.814368 | 1.596370e-51 | -8.615850e-47 |
| Msa0388990 | Msa0419720 | 0.814762 | 1.306196e-51 | -8.615850e-47 |
| Msa0388990 | Msa0428580 | 0.803431 | 3.497684e-49 | -8.615850e-47 |
| Msa0388990 | Msa0434570 | 0.814618 | 1.405390e-51 | -8.615850e-47 |
| Msa0388990 | Msa0434770 | 0.810333 | 1.214461e-50 | -8.615850e-47 |
| Msa0388990 | Msa0435370 | 0.815951 | 7.104412e-52 | -8.615850e-47 |
| Msa0388990 | Msa0435420 | 0.817671 | 2.922502e-52 | -8.615850e-47 |
| Msa0388990 | Msa0467100 | 0.809572 | 1.771178e-50 | -8.615850e-47 |
| Msa0388990 | Msa0479200 | 0.814556 | 1.450438e-51 | -8.615850e-47 |
| Msa0388990 | Msa0480780 | 0.815606 | 8.480534e-52 | -8.615850e-47 |
| Msa0388990 | Msa0481970 | 0.826625 | 2.448343e-54 | -8.615850e-47 |
| Msa0388990 | Msa0485240 | 0.810059 | 1.391518e-50 | -8.615850e-47 |
| Msa0388990 | Msa0511770 | 0.805634 | 1.214253e-49 | -8.615850e-47 |
| Msa0388990 | Msa0517640 | 0.802740 | 4.861396e-49 | -8.615850e-47 |
| Msa0388990 | Msa0518030 | 0.865193 | 7.050964e-65 | -8.615850e-47 |
| Msa0388990 | Msa0527020 | 0.811033 | 8.571380e-51 | -8.615850e-47 |
| Msa0388990 | Msa0527190 | 0.812987 | 3.214432e-51 | -8.615850e-47 |
| Msa0388990 | Msa0531250 | 0.818603 | 1.798302e-52 | -8.615850e-47 |
| Msa0388990 | Msa0534400 | 0.838350 | 3.030130e-57 | -8.615850e-47 |
| Msa0388990 | Msa0535110 | 0.817215 | 3.700651e-52 | -8.615850e-47 |
| Msa0388990 | Msa0547990 | 0.820387 | 7.046392e-53 | -8.615850e-47 |
| Msa0388990 | Msa0556010 | 0.862020 | 6.811938e-64 | -8.615850e-47 |
| Msa0388990 | Msa0581690 | 0.808517 | 2.978563e-50 | -8.615850e-47 |
| Msa0388990 | Msa0583500 | 0.807061 | 6.076136e-50 | -8.615850e-47 |
| Msa0388990 | Msa0584550 | 0.803982 | 2.688428e-49 | -8.615850e-47 |
| Msa0388990 | Msa0588090 | 0.807586 | 4.701344e-50 | -8.615850e-47 |
| Msa0388990 | Msa0590640 | 0.823312 | 1.482476e-53 | -8.615850e-47 |
| Msa0388990 | Msa0597770 | 0.829736 | 4.355725e-55 | -8.615850e-47 |
| Msa0388990 | Msa0601530 | 0.801692 | 7.987851e-49 | -8.615850e-47 |
| Msa0388990 | Msa0601950 | 0.801738 | 7.814500e-49 | -8.615850e-47 |
| Msa0388990 | Msa0615420 | 0.801838 | 7.454565e-49 | -8.615850e-47 |
| Msa0388990 | Msa0628420 | 0.819578 | 1.078829e-52 | -8.615850e-47 |
| Msa0388990 | Msa0630940 | 0.822703 | 2.055727e-53 | -8.615850e-47 |
| Msa0388990 | Msa0638480 | 0.823173 | 1.597243e-53 | -8.615850e-47 |
| Msa0388990 | Msa0644030 | 0.816118 | 6.520639e-52 | -8.615850e-47 |
| Msa0388990 | Msa0644800 | 0.829334 | 5.457281e-55 | -8.615850e-47 |
| Msa0388990 | Msa0647430 | 0.804571 | 2.026963e-49 | -8.615850e-47 |
| Msa0388990 | Msa0652690 | 0.811013 | 8.658252e-51 | -8.615850e-47 |
| Msa0388990 | Msa0658480 | 0.801381 | 9.247134e-49 | -8.615850e-47 |
| Msa0388990 | Msa0662890 | 0.802273 | 6.067159e-49 | -8.615850e-47 |
| Msa0388990 | Msa0669180 | 0.831429 | 1.677757e-55 | -8.615850e-47 |
| Msa0388990 | Msa0669520 | 0.812500 | 4.110091e-51 | -8.615850e-47 |
| Msa0388990 | Msa0679100 | 0.802099 | 6.586942e-49 | -8.615850e-47 |
| Msa0388990 | Msa0690310 | 0.812761 | 3.602840e-51 | -8.615850e-47 |
| Msa0388990 | Msa0692880 | 0.812598 | 3.911163e-51 | -8.615850e-47 |
| Msa0388990 | Msa0695130 | 0.805633 | 1.214848e-49 | -8.615850e-47 |
| Msa0388990 | Msa0702340 | 0.804608 | 1.990392e-49 | -8.615850e-47 |
| Msa0388990 | Msa0702590 | 0.817436 | 3.301537e-52 | -8.615850e-47 |
| Msa0388990 | Msa0702660 | 0.804994 | 1.653676e-49 | -8.615850e-47 |
| Msa0388990 | Msa0710270 | 0.828142 | 1.059736e-54 | -8.615850e-47 |
| Msa0388990 | Msa0712560 | 0.808775 | 2.623911e-50 | -8.615850e-47 |
| Msa0388990 | Msa0713680 | 0.806040 | 9.977815e-50 | -8.615850e-47 |
| Msa0388990 | Msa0716410 | 0.808246 | 3.403634e-50 | -8.615850e-47 |
| Msa0388990 | Msa0716860 | 0.802937 | 4.425932e-49 | -8.615850e-47 |
| Msa0388990 | Msa0744100 | 0.803895 | 2.802632e-49 | -8.615850e-47 |
| Msa0388990 | Msa0750250 | 0.823084 | 1.675726e-53 | -8.615850e-47 |
| Msa0388990 | Msa0757800 | 0.819942 | 8.908898e-53 | -8.615850e-47 |
| Msa0388990 | Msa0790400 | 0.806899 | 6.574114e-50 | -8.615850e-47 |
| Msa0388990 | Msa0809980 | 0.824329 | 8.561141e-54 | -8.615850e-47 |
| Msa0388990 | Msa0818630 | 0.821008 | 5.072177e-53 | -8.615850e-47 |
| Msa0388990 | Msa0836500 | 0.803271 | 3.775858e-49 | -8.615850e-47 |
| Msa0388990 | Msa0861510 | 0.844016 | 9.812443e-59 | -8.615850e-47 |
| Msa0388990 | Msa0861530 | 0.835063 | 2.086930e-56 | -8.615850e-47 |
| Msa0388990 | Msa0861600 | 0.839554 | 1.478370e-57 | -8.615850e-47 |
| Msa0388990 | Msa0866520 | 0.810429 | 1.158061e-50 | -8.615850e-47 |
| Msa0388990 | Msa0868440 | 0.806130 | 9.553415e-50 | -8.615850e-47 |
| Msa0388990 | Msa0888940 | 0.805048 | 1.610974e-49 | -8.615850e-47 |
| Msa0388990 | Msa0903780 | 0.813119 | 3.007694e-51 | -8.615850e-47 |
| Msa0388990 | Msa0934140 | 0.823334 | 1.464898e-53 | -8.615850e-47 |
| Msa0388990 | Msa0944660 | 0.829207 | 5.857977e-55 | -8.615850e-47 |
| Msa0388990 | Msa0945240 | 0.813377 | 2.640261e-51 | -8.615850e-47 |
| Msa0388990 | Msa0980940 | 0.803378 | 3.587361e-49 | -8.615850e-47 |
| Msa0388990 | Msa1000920 | 0.803063 | 4.168533e-49 | -8.615850e-47 |
| Msa0388990 | Msa1009750 | 0.805481 | 1.307555e-49 | -8.615850e-47 |
| Msa0388990 | Msa1010070 | 0.811600 | 6.457317e-51 | -8.615850e-47 |
| Msa0388990 | Msa1012720 | 0.803022 | 4.251172e-49 | -8.615850e-47 |
| Msa0388990 | Msa1028280 | 0.809975 | 1.450262e-50 | -8.615850e-47 |
| Msa0388990 | Msa1034500 | 0.817722 | 2.844922e-52 | -8.615850e-47 |
| Msa0388990 | Msa1050910 | 0.826114 | 3.240057e-54 | -8.615850e-47 |
| Msa0388990 | Msa1051600 | 0.818588 | 1.812598e-52 | -8.615850e-47 |
| Msa0388990 | Msa1059960 | 0.810131 | 1.342681e-50 | -8.615850e-47 |
| Msa0388990 | Msa1068100 | 0.810054 | 1.395011e-50 | -8.615850e-47 |
| Msa0388990 | Msa1079230 | 0.847853 | 8.892665e-60 | -8.615850e-47 |
| Msa0388990 | Msa1085330 | 0.800991 | 1.111409e-48 | -8.615850e-47 |
| Msa0388990 | Msa1093840 | 0.802770 | 4.791260e-49 | -8.615850e-47 |
| Msa0388990 | Msa1097820 | 0.810342 | 1.208744e-50 | -8.615850e-47 |
| Msa0388990 | Msa1102770 | 0.819108 | 1.380572e-52 | -8.615850e-47 |
| Msa0388990 | Msa1121260 | 0.815056 | 1.123965e-51 | -8.615850e-47 |
| Msa0388990 | Msa1123350 | 0.806909 | 6.541842e-50 | -8.615850e-47 |
| Msa0388990 | Msa1124110 | 0.815741 | 7.914325e-52 | -8.615850e-47 |
| Msa0388990 | Msa1127590 | 0.852251 | 5.218339e-61 | -8.615850e-47 |
| Msa0388990 | Msa1139890 | 0.807143 | 5.837717e-50 | -8.615850e-47 |
| Msa0388990 | Msa1145810 | 0.819692 | 1.016237e-52 | -8.615850e-47 |
| Msa0388990 | Msa1157870 | 0.812661 | 3.790063e-51 | -8.615850e-47 |
| Msa0388990 | Msa1162770 | 0.806563 | 7.741514e-50 | -8.615850e-47 |
| Msa0388990 | Msa1168550 | 0.800615 | 1.326408e-48 | -8.615850e-47 |
| Msa0388990 | Msa1168950 | 0.806533 | 7.855508e-50 | -8.615850e-47 |
| Msa0388990 | Msa1169040 | 0.816753 | 4.699621e-52 | -8.615850e-47 |
| Msa0388990 | Msa1169720 | 0.816518 | 5.305273e-52 | -8.615850e-47 |
| Msa0388990 | Msa1204100 | -0.815731 | 7.953473e-52 | -8.615850e-47 |
| Msa0388990 | Msa1208160 | 0.820718 | 5.914379e-53 | -8.615850e-47 |
| Msa0388990 | Msa1208430 | 0.810838 | 9.445671e-51 | -8.615850e-47 |
| Msa0388990 | Msa1212950 | 0.800724 | 1.260417e-48 | -8.615850e-47 |
| Msa0388990 | Msa1214320 | 0.809493 | 1.841660e-50 | -8.615850e-47 |
| Msa0388990 | Msa1219000 | 0.820038 | 8.469537e-53 | -8.615850e-47 |
| Msa0388990 | Msa1221060 | 0.811802 | 5.833307e-51 | -8.615850e-47 |
| Msa0388990 | Msa1224840 | 0.816713 | 4.798540e-52 | -8.615850e-47 |
| Msa0388990 | Msa1226270 | 0.808876 | 2.496820e-50 | -8.615850e-47 |
| Msa0388990 | Msa1231820 | 0.820653 | 6.123636e-53 | -8.615850e-47 |
| Msa0388990 | Msa1234550 | 0.849940 | 2.341187e-60 | -8.615850e-47 |
| Msa0388990 | Msa1253550 | 0.850566 | 1.563272e-60 | -8.615850e-47 |
| Msa0388990 | Msa1265590 | 0.812736 | 3.649019e-51 | -8.615850e-47 |
| Msa0388990 | Msa1276660 | 0.815405 | 9.400132e-52 | -8.615850e-47 |
| Msa0388990 | Msa1277080 | 0.871544 | 6.302235e-67 | -8.615850e-47 |
| Msa0388990 | Msa1278740 | 0.944476 | 1.818404e-103 | -8.615850e-47 |
| Msa0388990 | Msa1298370 | 0.835086 | 2.059413e-56 | -8.615850e-47 |
| Msa0388990 | Msa1303240 | 0.802401 | 5.709583e-49 | -8.615850e-47 |
| Msa0388990 | Msa1303250 | 0.810706 | 1.008840e-50 | -8.615850e-47 |
| Msa0388990 | Msa1317950 | 0.989037 | 1.963856e-176 | -8.615850e-47 |
| Msa0388990 | Msa1317960 | 0.995330 | 3.339325e-215 | -8.615850e-47 |
| Msa0388990 | Msa1328640 | 0.818021 | 2.436355e-52 | -8.615850e-47 |
| Msa0388990 | Msa1329050 | -0.813311 | 2.729830e-51 | -8.615850e-47 |
| Msa0388990 | Msa1332760 | 0.806209 | 9.191986e-50 | -8.615850e-47 |
| Msa0388990 | Msa1333560 | 0.814624 | 1.401141e-51 | -8.615850e-47 |
| Msa0388990 | Msa1335160 | 0.869589 | 2.765802e-66 | -8.615850e-47 |
| Msa0388990 | Msa1338830 | 0.810910 | 9.111569e-51 | -8.615850e-47 |
| Msa0388990 | Msa1348090 | 0.833966 | 3.936073e-56 | -8.615850e-47 |
| Msa0388990 | Msa1349520 | 0.819092 | 1.392475e-52 | -8.615850e-47 |
| Msa0388990 | Msa1359560 | 0.813990 | 1.934369e-51 | -8.615850e-47 |
| Msa0388990 | Msa1360980 | 0.821974 | 3.035377e-53 | -8.615850e-47 |
| Msa0388990 | Msa1361400 | 0.821687 | 3.537097e-53 | -8.615850e-47 |
| Msa0388990 | Msa1361410 | 0.802874 | 4.561063e-49 | -8.615850e-47 |
| Msa0388990 | Msa1369150 | 0.826739 | 2.299024e-54 | -8.615850e-47 |
| Msa0388990 | Msa1369690 | 0.803008 | 4.279389e-49 | -8.615850e-47 |
| Msa0388990 | Msa1371520 | 0.808840 | 2.541977e-50 | -8.615850e-47 |
| Msa0388990 | Msa1373820 | 0.813934 | 1.991019e-51 | -8.615850e-47 |
| Msa0388990 | Msa1383530 | 0.846154 | 2.595975e-59 | -8.615850e-47 |
| Msa0388990 | Msa1388550 | 0.915316 | 6.801549e-85 | -8.615850e-47 |
| Msa0388990 | Msa1393820 | 0.823737 | 1.178682e-53 | -8.615850e-47 |
| Msa0388990 | Msa1411950 | 0.813965 | 1.959347e-51 | -8.615850e-47 |
| Msa0388990 | Msa1416370 | 0.825445 | 4.669380e-54 | -8.615850e-47 |
| Msa0388990 | Msa1418240 | 0.818964 | 1.488704e-52 | -8.615850e-47 |
| Msa0388990 | Msa1439610 | 0.805228 | 1.477370e-49 | -8.615850e-47 |
| Msa0388990 | Msa1440310 | 0.811005 | 8.691052e-51 | -8.615850e-47 |
| Msa0388990 | Msa1440880 | 0.823118 | 1.645481e-53 | -8.615850e-47 |
| Msa0388990 | Msa1443300 | 0.812956 | 3.266084e-51 | -8.615850e-47 |
| Msa0388990 | Msa1447180 | 0.814268 | 1.679535e-51 | -8.615850e-47 |
| Msa0388990 | Msa1450720 | 0.814006 | 1.919533e-51 | -8.615850e-47 |
| Msa0388990 | Msa1451160 | 0.808863 | 2.512798e-50 | -8.615850e-47 |
| Msa0241830 | Msa0388990 | 0.836849 | 7.352440e-57 | -8.615850e-47 |
| Msa0245650 | Msa0388990 | 0.801237 | 9.899361e-49 | -8.615850e-47 |
| Msa0249580 | Msa0388990 | 0.818947 | 1.502349e-52 | -8.615850e-47 |
| Msa0261160 | Msa0388990 | 0.819929 | 8.970135e-53 | -8.615850e-47 |
| Msa0263080 | Msa0388990 | 0.838963 | 2.104362e-57 | -8.615850e-47 |
| Msa0274980 | Msa0388990 | 0.810924 | 9.048658e-51 | -8.615850e-47 |
| Msa0279850 | Msa0388990 | 0.819446 | 1.156681e-52 | -8.615850e-47 |
| Msa0300320 | Msa0388990 | 0.829365 | 5.362857e-55 | -8.615850e-47 |
| Msa0300690 | Msa0388990 | 0.819222 | 1.301072e-52 | -8.615850e-47 |
| Msa0307850 | Msa0388990 | 0.820360 | 7.145809e-53 | -8.615850e-47 |
| Msa0315690 | Msa0388990 | 0.821031 | 5.010589e-53 | -8.615850e-47 |
| Msa0322900 | Msa0388990 | 0.841866 | 3.664350e-58 | -8.615850e-47 |
| Msa0326590 | Msa0388990 | 0.800770 | 1.232992e-48 | -8.615850e-47 |
| Msa0328460 | Msa0388990 | 0.811984 | 5.325298e-51 | -8.615850e-47 |
| Msa0338210 | Msa0388990 | 0.803278 | 3.762339e-49 | -8.615850e-47 |
| Msa0341690 | Msa0388990 | 0.842141 | 3.098728e-58 | -8.615850e-47 |
| Msa0358400 | Msa0388990 | 0.802385 | 5.753239e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388990 | MtrunA17_Chr8g0348681 | 90.031 | 321 | 32 | 0 | 1 | 321 | 9 | 329 | 0.0 | 572 |
| Msa0388990 | MtrunA17_Chr8g0348691 | 93.103 | 261 | 16 | 1 | 325 | 583 | 1 | 261 | 2.78e-174 | 493 |
| Msa0388990 | MtrunA17_Chr7g0248041 | 42.857 | 602 | 290 | 16 | 1 | 582 | 1 | 568 | 3.32e-141 | 422 |
| Msa0388990 | MtrunA17_Chr8g0387141 | 38.720 | 328 | 185 | 8 | 251 | 572 | 246 | 563 | 2.59e-61 | 213 |
| Msa0388990 | MtrunA17_Chr8g0387181 | 36.538 | 364 | 185 | 9 | 250 | 572 | 237 | 595 | 2.57e-60 | 211 |
| Msa0388990 | MtrunA17_Chr8g0387161 | 34.615 | 312 | 154 | 7 | 263 | 572 | 1 | 264 | 5.67e-49 | 172 |
| Msa0388990 | MtrunA17_Chr1g0186191 | 34.603 | 315 | 183 | 6 | 277 | 572 | 252 | 562 | 6.51e-49 | 179 |
| Msa0388990 | MtrunA17_Chr1g0186281 | 35.256 | 312 | 173 | 9 | 277 | 572 | 254 | 552 | 1.58e-48 | 177 |
| Msa0388990 | MtrunA17_Chr1g0186261 | 46.591 | 176 | 92 | 2 | 397 | 572 | 382 | 555 | 1.58e-45 | 169 |
| Msa0388990 | MtrunA17_Chr6g0479271 | 36.694 | 248 | 133 | 9 | 251 | 497 | 71 | 295 | 3.03e-31 | 124 |
| Msa0388990 | MtrunA17_Chr7g0241681 | 35.450 | 189 | 109 | 5 | 382 | 564 | 179 | 360 | 3.02e-28 | 116 |
| Msa0388990 | MtrunA17_Chr3g0086341 | 34.066 | 182 | 105 | 5 | 400 | 570 | 149 | 326 | 4.58e-22 | 100 |
| Msa0388990 | MtrunA17_Chr7g0241661 | 30.890 | 191 | 119 | 4 | 380 | 564 | 169 | 352 | 6.96e-20 | 91.7 |
| Msa0388990 | MtrunA17_Chr5g0420461 | 31.429 | 175 | 88 | 5 | 323 | 497 | 22 | 164 | 2.10e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388990 | AT2G46040.3 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.40e-64 | 221 |
| Msa0388990 | AT2G46040.1 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.40e-64 | 221 |
| Msa0388990 | AT2G46040.2 | 39.938 | 323 | 153 | 9 | 253 | 570 | 258 | 544 | 1.46e-64 | 222 |
| Msa0388990 | AT4G11400.2 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 6.91e-55 | 196 |
| Msa0388990 | AT4G11400.1 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 6.91e-55 | 196 |
| Msa0388990 | AT5G04110.1 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.32e-28 | 119 |
| Msa0388990 | AT5G04110.3 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.32e-28 | 119 |
| Msa0388990 | AT5G04110.2 | 38.415 | 164 | 87 | 5 | 400 | 552 | 362 | 522 | 4.35e-28 | 119 |
| Msa0388990 | AT5G04110.4 | 36.735 | 147 | 79 | 5 | 400 | 535 | 361 | 504 | 1.76e-20 | 95.5 |
| Msa0388990 | AT1G26580.3 | 32.124 | 193 | 110 | 6 | 396 | 570 | 65 | 254 | 6.52e-19 | 90.1 |
| Msa0388990 | AT1G26580.2 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 1.00e-18 | 89.7 |
| Msa0388990 | AT1G26580.1 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 1.00e-18 | 89.7 |
| Msa0388990 | AT2G03470.1 | 32.240 | 183 | 105 | 6 | 399 | 570 | 122 | 296 | 9.98e-18 | 86.7 |
| Msa0388990 | AT2G03470.2 | 32.240 | 183 | 105 | 6 | 399 | 570 | 121 | 295 | 1.08e-17 | 86.3 |
| Msa0388990 | AT1G13880.3 | 29.843 | 191 | 112 | 7 | 402 | 579 | 131 | 312 | 2.59e-16 | 82.0 |
| Msa0388990 | AT1G13880.1 | 29.843 | 191 | 112 | 7 | 402 | 579 | 130 | 311 | 2.71e-16 | 82.0 |
| Msa0388990 | AT1G13880.2 | 29.843 | 191 | 112 | 7 | 402 | 579 | 140 | 321 | 2.78e-16 | 82.0 |
Find 186 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 3_1:+93562398 | None:intergenic |
| TCAGGCATCGGAACAATTTC+AGG | 0.206652 | 3_1:+93563960 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 3_1:-93562097 | Msa0388990:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 3_1:-93564564 | Msa0388990:CDS |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 3_1:-93562649 | Msa0388990:CDS |
| GAAAGGTTGGTTTGTTGTTT+TGG | 0.268550 | 3_1:-93561719 | Msa0388990:three_prime_UTR |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 3_1:-93562487 | Msa0388990:CDS |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 3_1:-93563851 | Msa0388990:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.295894 | 3_1:+93562003 | None:intergenic |
| GTGAGTTGTGGGATTTGGTT+GGG | 0.298315 | 3_1:-93564703 | Msa0388990:CDS |
| TGATGGTGAGTTGTGGGATT+TGG | 0.308604 | 3_1:-93564708 | Msa0388990:CDS |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 3_1:+93562101 | None:intergenic |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 3_1:+93562053 | None:intergenic |
| AAAATATGATATGCAATCTA+TGG | 0.330951 | 3_1:+93561591 | None:intergenic |
| CGTTGGTTCGACGCTGAAAC+TGG | 0.334461 | 3_1:-93564657 | Msa0388990:CDS |
| CATCCCTCGATTCATCATTC+TGG | 0.335310 | 3_1:+93564289 | None:intergenic |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 3_1:-93562555 | Msa0388990:CDS |
| CCCTTTCCATGTGGCTACTC+TGG | 0.347988 | 3_1:+93561894 | None:intergenic |
| TTAGTATCGCTTTCAGGATT+CGG | 0.348247 | 3_1:+93562404 | None:intergenic |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 3_1:-93564386 | Msa0388990:CDS |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 3_1:-93564573 | Msa0388990:CDS |
| GGTGAGTTGTGGGATTTGGT+TGG | 0.366075 | 3_1:-93564704 | Msa0388990:CDS |
| CTGTCTACATTTATATATAG+TGG | 0.366904 | 3_1:-93561614 | Msa0388990:three_prime_UTR |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 3_1:-93564515 | Msa0388990:CDS |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 3_1:-93562145 | Msa0388990:CDS |
| GTTGGGGAAGAATGTGGCTT+AGG | 0.382436 | 3_1:-93564686 | Msa0388990:CDS |
| AAAATCAGAATTTGAAAGGT+TGG | 0.383448 | 3_1:-93561732 | Msa0388990:three_prime_UTR |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 3_1:-93562382 | Msa0388990:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 3_1:-93564581 | Msa0388990:CDS |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 3_1:-93562395 | Msa0388990:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 3_1:-93564572 | Msa0388990:CDS |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 3_1:+93562584 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.409472 | 3_1:-93564413 | Msa0388990:CDS |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 3_1:+93562647 | None:intergenic |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 3_1:-93564171 | Msa0388990:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 3_1:-93564534 | Msa0388990:CDS |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 3_1:-93562293 | Msa0388990:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 3_1:-93562342 | Msa0388990:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 3_1:-93562198 | Msa0388990:CDS |
| TGTTTGTGATGGTGAGTTGT+GGG | 0.431433 | 3_1:-93564714 | Msa0388990:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 3_1:+93562317 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 3_1:-93562318 | Msa0388990:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 3_1:-93562394 | Msa0388990:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 3_1:-93564152 | Msa0388990:CDS |
| TGATAATATTGTTCCGGTAG+TGG | 0.436711 | 3_1:-93564090 | Msa0388990:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 3_1:+93562369 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 3_1:-93562061 | Msa0388990:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 3_1:-93563928 | Msa0388990:CDS |
| GTGGATTTGTCTGGTGGTGA+TGG | 0.450675 | 3_1:-93564071 | Msa0388990:CDS |
| TGAGTTGTGGGATTTGGTTG+GGG | 0.451450 | 3_1:-93564702 | Msa0388990:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 3_1:-93564013 | Msa0388990:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 3_1:-93564558 | Msa0388990:CDS |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 3_1:-93562172 | Msa0388990:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 3_1:-93564501 | Msa0388990:CDS |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 3_1:-93564096 | Msa0388990:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 3_1:-93564399 | Msa0388990:CDS |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 3_1:-93562096 | Msa0388990:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 3_1:-93562343 | Msa0388990:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 3_1:-93564500 | Msa0388990:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 3_1:-93562151 | Msa0388990:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 3_1:+93562275 | None:intergenic |
| ATTGTTGTTGACGGGAAAGG+TGG | 0.490249 | 3_1:-93564746 | Msa0388990:CDS |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 3_1:-93561998 | Msa0388990:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 3_1:+93562104 | None:intergenic |
| CTGTTTGTGATGGTGAGTTG+TGG | 0.494879 | 3_1:-93564715 | Msa0388990:CDS |
| GCATCGGCTCGCATCTGCGT+GGG | 0.496198 | 3_1:-93562464 | Msa0388990:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 3_1:-93564012 | Msa0388990:CDS |
| GTTCCGGTAGTGGATTTGTC+TGG | 0.501050 | 3_1:-93564080 | Msa0388990:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 3_1:-93564113 | Msa0388990:CDS |
| TTGTCTGGTGGTGATGGAAG+TGG | 0.503537 | 3_1:-93564065 | Msa0388990:CDS |
| GAGTCGTGTGTGATGAAAGT+TGG | 0.506590 | 3_1:-93564608 | Msa0388990:CDS |
| TCCAGAGTAGCCACATGGAA+AGG | 0.509426 | 3_1:-93561895 | Msa0388990:three_prime_UTR |
| GGGTTTGATGCTGTTTGTGA+TGG | 0.509454 | 3_1:-93564725 | Msa0388990:CDS |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 3_1:-93562375 | Msa0388990:CDS |
| AGCTGTTGATTGTTGTTGAC+GGG | 0.513550 | 3_1:-93564754 | Msa0388990:CDS |
| CCTCCTGTGTTGACAAATGT+TGG | 0.518613 | 3_1:+93561860 | None:intergenic |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 3_1:-93562181 | Msa0388990:CDS |
| GAATCGAGAAATCCTACATC+GGG | 0.518984 | 3_1:+93564311 | None:intergenic |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 3_1:-93562523 | Msa0388990:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 3_1:-93564398 | Msa0388990:CDS |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 3_1:-93562230 | Msa0388990:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 3_1:-93564507 | Msa0388990:CDS |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 3_1:-93562648 | Msa0388990:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 3_1:-93564540 | Msa0388990:CDS |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 3_1:-93564488 | Msa0388990:CDS |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 3_1:-93564049 | Msa0388990:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 3_1:-93563847 | Msa0388990:intron |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 3_1:-93564533 | Msa0388990:CDS |
| CCAGAGTAGCCACATGGAAA+GGG | 0.539118 | 3_1:-93561894 | Msa0388990:three_prime_UTR |
| GATTTGGTTGGGGAAGAATG+TGG | 0.539468 | 3_1:-93564692 | Msa0388990:CDS |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 3_1:-93564242 | Msa0388990:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 3_1:-93563920 | Msa0388990:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 3_1:-93563913 | Msa0388990:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 3_1:-93564237 | Msa0388990:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 3_1:-93564448 | Msa0388990:CDS |
| GTGAAAGAAGTTCCCGATGT+AGG | 0.550596 | 3_1:-93564323 | Msa0388990:CDS |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 3_1:-93562563 | Msa0388990:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 3_1:-93564522 | Msa0388990:CDS |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 3_1:+93563933 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 3_1:-93562332 | Msa0388990:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 3_1:-93562486 | Msa0388990:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 3_1:-93563895 | Msa0388990:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 3_1:-93562144 | Msa0388990:CDS |
| TTGATTGTTGTTGACGGGAA+AGG | 0.563358 | 3_1:-93564749 | Msa0388990:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 3_1:-93564197 | Msa0388990:CDS |
| GGATTCGGAGCAGTCCACTC+TGG | 0.565588 | 3_1:+93562419 | None:intergenic |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 3_1:-93564269 | Msa0388990:CDS |
| AAGCTGTTGATTGTTGTTGA+CGG | 0.566769 | 3_1:-93564755 | Msa0388990:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 3_1:-93564539 | Msa0388990:CDS |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 3_1:-93562569 | Msa0388990:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 3_1:-93562643 | Msa0388990:CDS |
| GCCTGAAAAGCCAAAGTGGA+GGG | 0.574127 | 3_1:-93563943 | Msa0388990:CDS |
| AGAAATTCACGGTGGGAATG+TGG | 0.576328 | 3_1:-93564420 | Msa0388990:CDS |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 3_1:+93562370 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 3_1:+93562671 | None:intergenic |
| TTGTTGTTGACGGGAAAGGT+GGG | 0.578023 | 3_1:-93564745 | Msa0388990:CDS |
| CATCGGCTCGCATCTGCGTG+GGG | 0.579313 | 3_1:-93562463 | Msa0388990:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 3_1:-93564395 | Msa0388990:CDS |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 3_1:-93562641 | Msa0388990:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 3_1:-93562642 | Msa0388990:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 3_1:-93564248 | Msa0388990:CDS |
| AAGTTATAGTAGATGGGCAT+CGG | 0.582631 | 3_1:-93562480 | Msa0388990:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 3_1:-93561987 | Msa0388990:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 3_1:-93562060 | Msa0388990:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 3_1:+93562195 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 3_1:+93564256 | None:intergenic |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 3_1:-93564196 | Msa0388990:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 3_1:+93562105 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 3_1:-93562328 | Msa0388990:CDS |
| CGATGCCTGAAAAGCCAAAG+TGG | 0.588222 | 3_1:-93563947 | Msa0388990:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 3_1:-93564571 | Msa0388990:CDS |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 3_1:-93564519 | Msa0388990:CDS |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 3_1:-93564405 | Msa0388990:CDS |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 3_1:+93562526 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 3_1:-93562326 | Msa0388990:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 3_1:-93562400 | Msa0388990:CDS |
| CCACCAGACAAATCCACTAC+CGG | 0.592047 | 3_1:+93564077 | None:intergenic |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 3_1:-93562327 | Msa0388990:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 3_1:-93564529 | Msa0388990:CDS |
| TCATCACTTGGTGACTACAA+AGG | 0.599966 | 3_1:-93561561 | Msa0388990:three_prime_UTR |
| GGCATCGGCTCGCATCTGCG+TGG | 0.600636 | 3_1:-93562465 | Msa0388990:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 3_1:-93563914 | Msa0388990:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 3_1:-93564137 | Msa0388990:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 3_1:+93562653 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 3_1:+93561985 | None:intergenic |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 3_1:-93564039 | Msa0388990:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 3_1:-93562194 | Msa0388990:CDS |
| AGTGGGGAGAAAGAAATTCA+CGG | 0.609700 | 3_1:-93564431 | Msa0388990:CDS |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 3_1:-93564255 | Msa0388990:CDS |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 3_1:-93562550 | Msa0388990:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 3_1:-93564449 | Msa0388990:CDS |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 3_1:-93562225 | Msa0388990:CDS |
| ATTCCAGAATGATGAATCGA+GGG | 0.617833 | 3_1:-93564292 | Msa0388990:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 3_1:-93564597 | Msa0388990:CDS |
| TGCCTGAAAAGCCAAAGTGG+AGG | 0.624771 | 3_1:-93563944 | Msa0388990:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 3_1:-93562113 | Msa0388990:CDS |
| CCGGTAGTGGATTTGTCTGG+TGG | 0.629270 | 3_1:-93564077 | Msa0388990:CDS |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 3_1:+93563969 | None:intergenic |
| CAGAATGATGAATCGAGGGA+TGG | 0.631748 | 3_1:-93564288 | Msa0388990:CDS |
| GGAATCGAGAAATCCTACAT+CGG | 0.631911 | 3_1:+93564310 | None:intergenic |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 3_1:-93562640 | Msa0388990:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 3_1:-93562433 | Msa0388990:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 3_1:-93564036 | Msa0388990:CDS |
| CCAACATTTGTCAACACAGG+AGG | 0.637631 | 3_1:-93561860 | Msa0388990:three_prime_UTR |
| AATCCAACATTTGTCAACAC+AGG | 0.638035 | 3_1:-93561863 | Msa0388990:three_prime_UTR |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 3_1:-93562551 | Msa0388990:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 3_1:+93562652 | None:intergenic |
| GATTCCAGAATGATGAATCG+AGG | 0.640790 | 3_1:-93564293 | Msa0388990:CDS |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 3_1:-93564530 | Msa0388990:CDS |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 3_1:+93562359 | None:intergenic |
| GGGAGAAAGAAATTCACGGT+GGG | 0.651200 | 3_1:-93564427 | Msa0388990:CDS |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 3_1:-93564254 | Msa0388990:CDS |
| TAGATTCCAGAGTAGCCACA+TGG | 0.665441 | 3_1:-93561900 | Msa0388990:three_prime_UTR |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 3_1:-93564447 | Msa0388990:CDS |
| TGTGGCTTAGGTGTTAACGT+TGG | 0.673988 | 3_1:-93564674 | Msa0388990:CDS |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 3_1:-93562308 | Msa0388990:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 3_1:-93564122 | Msa0388990:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 3_1:-93564477 | Msa0388990:CDS |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 3_1:-93564497 | Msa0388990:CDS |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 3_1:-93564375 | Msa0388990:CDS |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 3_1:-93564161 | Msa0388990:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 3_1:-93563925 | Msa0388990:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 3_1:+93563980 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 3_1:+93563970 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 3_1:-93564186 | Msa0388990:CDS |
| GGGGAGAAAGAAATTCACGG+TGG | 0.772176 | 3_1:-93564428 | Msa0388990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAAGCAATTTAAGTT+TGG | + | chr3_1:93562493-93562512 | None:intergenic | 15.0% |
| !!! | ATATACATCATAGATTTTAA+AGG | - | chr3_1:93564520-93564539 | Msa0388990:CDS | 15.0% |
| !!! | TATACATCATAGATTTTAAA+GGG | - | chr3_1:93564521-93564540 | Msa0388990:CDS | 15.0% |
| !! | TTTCATGTGTAAATGATAAT+TGG | - | chr3_1:93562691-93562710 | Msa0388990:intron | 20.0% |
| !!! | TCTTATTTTGAGCAAATAAT+TGG | - | chr3_1:93562723-93562742 | Msa0388990:intron | 20.0% |
| !! | ATGACTTATTAAATTTCATG+TGG | - | chr3_1:93562871-93562890 | Msa0388990:intron | 20.0% |
| !! | TGACTTATTAAATTTCATGT+GGG | - | chr3_1:93562872-93562891 | Msa0388990:intron | 20.0% |
| !! | ACAAAATTAAATCATGATGA+AGG | + | chr3_1:93562998-93563017 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | - | chr3_1:93563201-93563220 | Msa0388990:intron | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | - | chr3_1:93563202-93563221 | Msa0388990:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | - | chr3_1:93563286-93563305 | Msa0388990:intron | 20.0% |
| !!! | AACCATGCTTTAAATAAAAA+GGG | + | chr3_1:93563339-93563358 | None:intergenic | 20.0% |
| !!! | TAACCATGCTTTAAATAAAA+AGG | + | chr3_1:93563340-93563359 | None:intergenic | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | - | chr3_1:93563465-93563484 | Msa0388990:intron | 20.0% |
| !! | GTTAAAAATCAGAATTTGAA+AGG | - | chr3_1:93564543-93564562 | Msa0388990:CDS | 20.0% |
| !! | AAAATATGATATGCAATCTA+TGG | + | chr3_1:93564691-93564710 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTTTTCATCACT+TGG | - | chr3_1:93564706-93564725 | Msa0388990:CDS | 20.0% |
| ! | TGCTTGAAATTTAGTAAACT+TGG | - | chr3_1:93562533-93562552 | Msa0388990:CDS | 25.0% |
| ! | GCTTGAAATTTAGTAAACTT+GGG | - | chr3_1:93562534-93562553 | Msa0388990:CDS | 25.0% |
| ! | AACAGTTGACATTAAAACTT+GGG | + | chr3_1:93562794-93562813 | None:intergenic | 25.0% |
| ! | TAACAGTTGACATTAAAACT+TGG | + | chr3_1:93562795-93562814 | None:intergenic | 25.0% |
| ! | GAAATTTAATAAGTCATCAG+TGG | + | chr3_1:93562868-93562887 | None:intergenic | 25.0% |
| !!! | AATATCTCAGCGTTTTTTTT+CGG | + | chr3_1:93563122-93563141 | None:intergenic | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | - | chr3_1:93563134-93563153 | Msa0388990:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | - | chr3_1:93563255-93563274 | Msa0388990:intron | 25.0% |
| ! | AATAACACACCTTAATAGTA+AGG | + | chr3_1:93563267-93563286 | None:intergenic | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | - | chr3_1:93563291-93563310 | Msa0388990:intron | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | - | chr3_1:93563353-93563372 | Msa0388990:intron | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | - | chr3_1:93563354-93563373 | Msa0388990:intron | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | - | chr3_1:93563427-93563446 | Msa0388990:intron | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | - | chr3_1:93563477-93563496 | Msa0388990:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | + | chr3_1:93563548-93563567 | None:intergenic | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | + | chr3_1:93563572-93563591 | None:intergenic | 25.0% |
| ! | AAAATCAGAATTTGAAAGGT+TGG | - | chr3_1:93564547-93564566 | Msa0388990:CDS | 25.0% |
| ! | CTGTCTACATTTATATATAG+TGG | - | chr3_1:93564665-93564684 | Msa0388990:CDS | 25.0% |
| !!! | AGAAGCTTTTTAGAAATACA+GGG | - | chr3_1:93564752-93564771 | Msa0388990:CDS | 25.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | - | chr3_1:93562064-93562083 | Msa0388990:CDS | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | - | chr3_1:93562068-93562087 | Msa0388990:CDS | 30.0% |
| TATCGGTGATAATATTGTTC+CGG | - | chr3_1:93562183-93562202 | Msa0388990:CDS | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | - | chr3_1:93562267-93562286 | Msa0388990:CDS | 30.0% | |
| ! | CAATTTAAGTTTGGCTAACT+CGG | + | chr3_1:93562484-93562503 | None:intergenic | 30.0% |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | - | chr3_1:93562659-93562678 | Msa0388990:CDS | 30.0% |
| !! | TACAGTTTCATTTAGTTTGC+TGG | - | chr3_1:93562813-93562832 | Msa0388990:intron | 30.0% |
| !! | ACAGTTTCATTTAGTTTGCT+GGG | - | chr3_1:93562814-93562833 | Msa0388990:intron | 30.0% |
| ATGCTAATGTGATGTGTATT+TGG | - | chr3_1:93563050-93563069 | Msa0388990:intron | 30.0% | |
| TGCTAATGTGATGTGTATTT+GGG | - | chr3_1:93563051-93563070 | Msa0388990:intron | 30.0% | |
| TAAATAAAAAGGGCCCATAA+TGG | + | chr3_1:93563329-93563348 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | + | chr3_1:93563380-93563399 | None:intergenic | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | + | chr3_1:93563578-93563597 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | - | chr3_1:93563793-93563812 | Msa0388990:intron | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | - | chr3_1:93563936-93563955 | Msa0388990:CDS | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | - | chr3_1:93563937-93563956 | Msa0388990:CDS | 30.0% | |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | + | chr3_1:93564033-93564052 | None:intergenic | 30.0% |
| AAATGTTCATATCCTCTCTT+TGG | + | chr3_1:93564181-93564200 | None:intergenic | 30.0% | |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | - | chr3_1:93564346-93564365 | Msa0388990:CDS | 30.0% |
| ! | TTCTAAAAAGCTTCTGTTTC+AGG | + | chr3_1:93564747-93564766 | None:intergenic | 30.0% |
| !! | CAGAAGCTTTTTAGAAATAC+AGG | - | chr3_1:93564751-93564770 | Msa0388990:CDS | 30.0% |
| ! | ACAGGGAAATTTTATTGTAG+AGG | - | chr3_1:93564769-93564788 | Msa0388990:CDS | 30.0% |
| ! | CAGGGAAATTTTATTGTAGA+GGG | - | chr3_1:93564770-93564789 | Msa0388990:CDS | 30.0% |
| ! | AAGCTGTTGATTGTTGTTGA+CGG | - | chr3_1:93561524-93561543 | Msa0388990:three_prime_UTR | 35.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | - | chr3_1:93561707-93561726 | Msa0388990:three_prime_UTR | 35.0% |
| !! | AAGAGTGTGAATTTTGAGTC+TGG | - | chr3_1:93561929-93561948 | Msa0388990:CDS | 35.0% |
| ATTCCAGAATGATGAATCGA+GGG | - | chr3_1:93561987-93562006 | Msa0388990:CDS | 35.0% | |
| !! | GTAGTTGAAGATTTTGATGG+AGG | - | chr3_1:93562067-93562086 | Msa0388990:CDS | 35.0% |
| ATGGAGGGAAAATAACTGTA+GGG | - | chr3_1:93562083-93562102 | Msa0388990:CDS | 35.0% | |
| ! | GAGAATCATGATGGTGATAT+CGG | - | chr3_1:93562166-93562185 | Msa0388990:CDS | 35.0% |
| TGATAATATTGTTCCGGTAG+TGG | - | chr3_1:93562189-93562208 | Msa0388990:CDS | 35.0% | |
| CTCTGTTTGATATGATGAGT+TGG | - | chr3_1:93562266-93562285 | Msa0388990:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | + | chr3_1:93562312-93562331 | None:intergenic | 35.0% | |
| ! | GCATTTGTTAGTTGTTACTG+TGG | - | chr3_1:93562748-93562767 | Msa0388990:intron | 35.0% |
| !! | CAGTTTCATTTAGTTTGCTG+GGG | - | chr3_1:93562815-93562834 | Msa0388990:intron | 35.0% |
| !! | AGTTTCATTTAGTTTGCTGG+GGG | - | chr3_1:93562816-93562835 | Msa0388990:intron | 35.0% |
| ! | CACTTGTCAGTTTTTCATGT+GGG | - | chr3_1:93562897-93562916 | Msa0388990:intron | 35.0% |
| ! | ACTTGTCAGTTTTTCATGTG+GGG | - | chr3_1:93562898-93562917 | Msa0388990:intron | 35.0% |
| TAATGTGATGTGTATTTGGG+TGG | - | chr3_1:93563054-93563073 | Msa0388990:intron | 35.0% | |
| AATGTGATGTGTATTTGGGT+GGG | - | chr3_1:93563055-93563074 | Msa0388990:intron | 35.0% | |
| GCAAACATTCTCACCATTAT+GGG | - | chr3_1:93563313-93563332 | Msa0388990:intron | 35.0% | |
| !! | GGCCCTTTTTATTTAAAGCA+TGG | - | chr3_1:93563334-93563353 | Msa0388990:intron | 35.0% |
| CAATGTATGCTATCCCAAAA+AGG | + | chr3_1:93563381-93563400 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | + | chr3_1:93563557-93563576 | None:intergenic | 35.0% |
| TCCGACAATCTACAATCTTA+GGG | - | chr3_1:93563631-93563650 | Msa0388990:intron | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | + | chr3_1:93563635-93563654 | None:intergenic | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | - | chr3_1:93563637-93563656 | Msa0388990:intron | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | - | chr3_1:93563792-93563811 | Msa0388990:intron | 35.0% | |
| AAGTTATAGTAGATGGGCAT+CGG | - | chr3_1:93563799-93563818 | Msa0388990:intron | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | + | chr3_1:93563878-93563897 | None:intergenic | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | - | chr3_1:93563885-93563904 | Msa0388990:CDS | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | - | chr3_1:93564042-93564061 | Msa0388990:CDS | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | - | chr3_1:93564182-93564201 | Msa0388990:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | - | chr3_1:93564183-93564202 | Msa0388990:CDS | 35.0% | |
| AAACATTTCCTAACAAGAGC+AGG | - | chr3_1:93564218-93564237 | Msa0388990:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | - | chr3_1:93564219-93564238 | Msa0388990:CDS | 35.0% | |
| AATCCAACATTTGTCAACAC+AGG | - | chr3_1:93564416-93564435 | Msa0388990:CDS | 35.0% | |
| !!! | GAAAGGTTGGTTTGTTGTTT+TGG | - | chr3_1:93564560-93564579 | Msa0388990:CDS | 35.0% |
| !!! | TTTGTTGTTTTGGTCATGTC+TGG | - | chr3_1:93564570-93564589 | Msa0388990:CDS | 35.0% |
| ! | CTAGTATGCTTCAGATTTTG+AGG | - | chr3_1:93564630-93564649 | Msa0388990:CDS | 35.0% |
| ! | AGCTGTTGATTGTTGTTGAC+GGG | - | chr3_1:93561525-93561544 | Msa0388990:three_prime_UTR | 40.0% |
| ! | TTGATTGTTGTTGACGGGAA+AGG | - | chr3_1:93561530-93561549 | Msa0388990:three_prime_UTR | 40.0% |
| ! | TGTTTGTGATGGTGAGTTGT+GGG | - | chr3_1:93561565-93561584 | Msa0388990:three_prime_UTR | 40.0% |
| !! | GATGAAAGTTGGTGATGCTA+AGG | - | chr3_1:93561682-93561701 | Msa0388990:three_prime_UTR | 40.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | - | chr3_1:93561706-93561725 | Msa0388990:three_prime_UTR | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | - | chr3_1:93561708-93561727 | Msa0388990:three_prime_UTR | 40.0% |
| TGAGGTGAATGAGTTGTTGT+CGG | - | chr3_1:93561739-93561758 | Msa0388990:three_prime_UTR | 40.0% | |
| AGTGGGGAGAAAGAAATTCA+CGG | - | chr3_1:93561848-93561867 | Msa0388990:three_prime_UTR | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | - | chr3_1:93561881-93561900 | Msa0388990:three_prime_UTR | 40.0% | |
| !! | AGTGTGAATTTTGAGTCTGG+TGG | - | chr3_1:93561932-93561951 | Msa0388990:CDS | 40.0% |
| !! | GTGTGAATTTTGAGTCTGGT+GGG | - | chr3_1:93561933-93561952 | Msa0388990:CDS | 40.0% |
| !! | TGTGAATTTTGAGTCTGGTG+GGG | - | chr3_1:93561934-93561953 | Msa0388990:CDS | 40.0% |
| GAATCGAGAAATCCTACATC+GGG | + | chr3_1:93561971-93561990 | None:intergenic | 40.0% | |
| GGAATCGAGAAATCCTACAT+CGG | + | chr3_1:93561972-93561991 | None:intergenic | 40.0% | |
| GATTCCAGAATGATGAATCG+AGG | - | chr3_1:93561986-93562005 | Msa0388990:CDS | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | - | chr3_1:93562082-93562101 | Msa0388990:CDS | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | - | chr3_1:93562093-93562112 | Msa0388990:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | - | chr3_1:93562157-93562176 | Msa0388990:CDS | 40.0% | |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | - | chr3_1:93562230-93562249 | Msa0388990:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | - | chr3_1:93562240-93562259 | Msa0388990:CDS | 40.0% |
| GGAACAATTTCAGGATCACA+AGG | + | chr3_1:93562313-93562332 | None:intergenic | 40.0% | |
| !! | CGAGCATTGAACAGCAAAAT+TGG | - | chr3_1:93562428-93562447 | Msa0388990:CDS | 40.0% |
| CATTGAACAGCAAAATTGGC+AGG | - | chr3_1:93562432-93562451 | Msa0388990:CDS | 40.0% | |
| !! | GTTTCATTTAGTTTGCTGGG+GGG | - | chr3_1:93562817-93562836 | Msa0388990:intron | 40.0% |
| CCACATGAAAAACTGACAAG+TGG | + | chr3_1:93562899-93562918 | None:intergenic | 40.0% | |
| ! | CCACTTGTCAGTTTTTCATG+TGG | - | chr3_1:93562896-93562915 | Msa0388990:intron | 40.0% |
| ATGTGATGTGTATTTGGGTG+GGG | - | chr3_1:93563056-93563075 | Msa0388990:intron | 40.0% | |
| ATTTGGGTGGGGAAAATTGT+TGG | - | chr3_1:93563067-93563086 | Msa0388990:intron | 40.0% | |
| GGCAAACATTCTCACCATTA+TGG | - | chr3_1:93563312-93563331 | Msa0388990:intron | 40.0% | |
| ! | ATGCATTTATGGGCCCTTTT+TGG | - | chr3_1:93563364-93563383 | Msa0388990:intron | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | - | chr3_1:93563365-93563384 | Msa0388990:intron | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | - | chr3_1:93563387-93563406 | Msa0388990:intron | 40.0% |
| AGATTGTAGATTGTCGGAGT+GGG | + | chr3_1:93563629-93563648 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | + | chr3_1:93563630-93563649 | None:intergenic | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | - | chr3_1:93563630-93563649 | Msa0388990:intron | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | - | chr3_1:93563636-93563655 | Msa0388990:intron | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | - | chr3_1:93563638-93563657 | Msa0388990:intron | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | - | chr3_1:93563879-93563898 | Msa0388990:CDS | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | + | chr3_1:93563884-93563903 | None:intergenic | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | - | chr3_1:93563884-93563903 | Msa0388990:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | + | chr3_1:93563923-93563942 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | - | chr3_1:93564081-93564100 | Msa0388990:CDS | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | - | chr3_1:93564098-93564117 | Msa0388990:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | - | chr3_1:93564134-93564153 | Msa0388990:CDS | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | - | chr3_1:93564135-93564154 | Msa0388990:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | + | chr3_1:93564177-93564196 | None:intergenic | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | + | chr3_1:93564178-93564197 | None:intergenic | 40.0% | |
| AAAGTTTCCCTGCTCTTGTT+AGG | + | chr3_1:93564229-93564248 | None:intergenic | 40.0% | |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | - | chr3_1:93564353-93564372 | Msa0388990:CDS | 40.0% |
| !!! | TGCTATTTTCCCTTTCCATG+TGG | + | chr3_1:93564397-93564416 | None:intergenic | 40.0% |
| ! | TCATCACTTGGTGACTACAA+AGG | - | chr3_1:93564718-93564737 | Msa0388990:CDS | 40.0% |
| ! | ATTGTTGTTGACGGGAAAGG+TGG | - | chr3_1:93561533-93561552 | Msa0388990:three_prime_UTR | 45.0% |
| ! | TTGTTGTTGACGGGAAAGGT+GGG | - | chr3_1:93561534-93561553 | Msa0388990:three_prime_UTR | 45.0% |
| ! | GGGTTTGATGCTGTTTGTGA+TGG | - | chr3_1:93561554-93561573 | Msa0388990:three_prime_UTR | 45.0% |
| ! | CTGTTTGTGATGGTGAGTTG+TGG | - | chr3_1:93561564-93561583 | Msa0388990:three_prime_UTR | 45.0% |
| ! | TGATGGTGAGTTGTGGGATT+TGG | - | chr3_1:93561571-93561590 | Msa0388990:three_prime_UTR | 45.0% |
| ! | GTGAGTTGTGGGATTTGGTT+GGG | - | chr3_1:93561576-93561595 | Msa0388990:three_prime_UTR | 45.0% |
| ! | TGAGTTGTGGGATTTGGTTG+GGG | - | chr3_1:93561577-93561596 | Msa0388990:three_prime_UTR | 45.0% |
| ! | GATTTGGTTGGGGAAGAATG+TGG | - | chr3_1:93561587-93561606 | Msa0388990:three_prime_UTR | 45.0% |
| TGTGGCTTAGGTGTTAACGT+TGG | - | chr3_1:93561605-93561624 | Msa0388990:three_prime_UTR | 45.0% | |
| GAGTCGTGTGTGATGAAAGT+TGG | - | chr3_1:93561671-93561690 | Msa0388990:three_prime_UTR | 45.0% | |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | - | chr3_1:93561698-93561717 | Msa0388990:three_prime_UTR | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | - | chr3_1:93561715-93561734 | Msa0388990:three_prime_UTR | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | - | chr3_1:93561721-93561740 | Msa0388990:three_prime_UTR | 45.0% |
| GAGGTGAATGAGTTGTTGTC+GGG | - | chr3_1:93561740-93561759 | Msa0388990:three_prime_UTR | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | - | chr3_1:93561746-93561765 | Msa0388990:three_prime_UTR | 45.0% | |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | - | chr3_1:93561830-93561849 | Msa0388990:three_prime_UTR | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | - | chr3_1:93561831-93561850 | Msa0388990:three_prime_UTR | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | - | chr3_1:93561832-93561851 | Msa0388990:three_prime_UTR | 45.0% |
| GGGAGAAAGAAATTCACGGT+GGG | - | chr3_1:93561852-93561871 | Msa0388990:three_prime_UTR | 45.0% | |
| AGAAATTCACGGTGGGAATG+TGG | - | chr3_1:93561859-93561878 | Msa0388990:three_prime_UTR | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | - | chr3_1:93561874-93561893 | Msa0388990:three_prime_UTR | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | - | chr3_1:93561880-93561899 | Msa0388990:three_prime_UTR | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | - | chr3_1:93561893-93561912 | Msa0388990:three_prime_UTR | 45.0% | |
| GTGAAAGAAGTTCCCGATGT+AGG | - | chr3_1:93561956-93561975 | Msa0388990:CDS | 45.0% | |
| CATCCCTCGATTCATCATTC+TGG | + | chr3_1:93561993-93562012 | None:intergenic | 45.0% | |
| CAGAATGATGAATCGAGGGA+TGG | - | chr3_1:93561991-93562010 | Msa0388990:CDS | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | - | chr3_1:93562010-93562029 | Msa0388990:CDS | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | + | chr3_1:93562026-93562045 | None:intergenic | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | - | chr3_1:93562025-93562044 | Msa0388990:CDS | 45.0% | |
| !! | TGAGGGTAATGGTGATGGAA+TGG | - | chr3_1:93562042-93562061 | Msa0388990:CDS | 45.0% |
| AACTGAGGATGCGTCTGATT+TGG | - | chr3_1:93562108-93562127 | Msa0388990:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | - | chr3_1:93562142-93562161 | Msa0388990:CDS | 45.0% | |
| TCTTAAGAGGAAGAGAGAGG+AGG | - | chr3_1:93562243-93562262 | Msa0388990:CDS | 45.0% | |
| !! | TCAGGCATCGGAACAATTTC+AGG | + | chr3_1:93562322-93562341 | None:intergenic | 45.0% |
| !!! | CACTTTGGCTTTTCAGGCAT+CGG | + | chr3_1:93562334-93562353 | None:intergenic | 45.0% |
| TTACTGTAAGCCCTCCACTT+TGG | + | chr3_1:93562349-93562368 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | - | chr3_1:93562359-93562378 | Msa0388990:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | + | chr3_1:93563611-93563630 | None:intergenic | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | - | chr3_1:93563639-93563658 | Msa0388990:intron | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | - | chr3_1:93563710-93563729 | Msa0388990:intron | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | + | chr3_1:93563912-93563931 | None:intergenic | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | + | chr3_1:93563913-93563932 | None:intergenic | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | - | chr3_1:93563947-93563966 | Msa0388990:CDS | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | - | chr3_1:93563951-93563970 | Msa0388990:CDS | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | - | chr3_1:93563952-93563971 | Msa0388990:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | - | chr3_1:93563953-93563972 | Msa0388990:CDS | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | + | chr3_1:93564007-93564026 | None:intergenic | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | - | chr3_1:93564049-93564068 | Msa0388990:CDS | 45.0% | |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | - | chr3_1:93564068-93564087 | Msa0388990:CDS | 45.0% |
| CATTGGCGTTTCGATAAGGT+CGG | - | chr3_1:93564085-93564104 | Msa0388990:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | - | chr3_1:93564107-93564126 | Msa0388990:CDS | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | - | chr3_1:93564128-93564147 | Msa0388990:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | + | chr3_1:93564279-93564298 | None:intergenic | 45.0% | |
| AACGCAAAGCATACCATAGC+AGG | - | chr3_1:93564281-93564300 | Msa0388990:CDS | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | - | chr3_1:93564292-93564311 | Msa0388990:CDS | 45.0% | |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | - | chr3_1:93564354-93564373 | Msa0388990:CDS | 45.0% |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | - | chr3_1:93564355-93564374 | Msa0388990:CDS | 45.0% |
| TAGATTCCAGAGTAGCCACA+TGG | - | chr3_1:93564379-93564398 | Msa0388990:CDS | 45.0% | |
| ! | CCTCCTGTGTTGACAAATGT+TGG | + | chr3_1:93564422-93564441 | None:intergenic | 45.0% |
| CCAACATTTGTCAACACAGG+AGG | - | chr3_1:93564419-93564438 | Msa0388990:CDS | 45.0% | |
| !! | GTTCGTGTTTTGAACAGCGT+AGG | - | chr3_1:93564596-93564615 | Msa0388990:CDS | 45.0% |
| ! | GGTGAGTTGTGGGATTTGGT+TGG | - | chr3_1:93561575-93561594 | Msa0388990:three_prime_UTR | 50.0% |
| GTTGGGGAAGAATGTGGCTT+AGG | - | chr3_1:93561593-93561612 | Msa0388990:three_prime_UTR | 50.0% | |
| GAATGAGTTGTTGTCGGGTC+AGG | - | chr3_1:93561745-93561764 | Msa0388990:three_prime_UTR | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | - | chr3_1:93561779-93561798 | Msa0388990:three_prime_UTR | 50.0% | |
| AAGGTTAAGGGTGGAGCTGA+TGG | - | chr3_1:93561791-93561810 | Msa0388990:three_prime_UTR | 50.0% | |
| GGGGAGAAAGAAATTCACGG+TGG | - | chr3_1:93561851-93561870 | Msa0388990:three_prime_UTR | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | - | chr3_1:93561884-93561903 | Msa0388990:three_prime_UTR | 50.0% | |
| !! | TGGAGTTGATGGTGCTAACG+AGG | - | chr3_1:93561904-93561923 | Msa0388990:exon | 50.0% |
| CGATGTTGGAAAGCTGAGTG+AGG | - | chr3_1:93562024-93562043 | Msa0388990:CDS | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | - | chr3_1:93562031-93562050 | Msa0388990:CDS | 50.0% | |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | - | chr3_1:93562037-93562056 | Msa0388990:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | - | chr3_1:93562118-93562137 | Msa0388990:CDS | 50.0% |
| !! | GTTCCGGTAGTGGATTTGTC+TGG | - | chr3_1:93562199-93562218 | Msa0388990:CDS | 50.0% |
| CCACCAGACAAATCCACTAC+CGG | + | chr3_1:93562205-93562224 | None:intergenic | 50.0% | |
| ! | GTGGATTTGTCTGGTGGTGA+TGG | - | chr3_1:93562208-93562227 | Msa0388990:CDS | 50.0% |
| !! | TTGTCTGGTGGTGATGGAAG+TGG | - | chr3_1:93562214-93562233 | Msa0388990:CDS | 50.0% |
| AGGATCACAAGGGTTACTCG+CGG | + | chr3_1:93562302-93562321 | None:intergenic | 50.0% | |
| CGATGCCTGAAAAGCCAAAG+TGG | - | chr3_1:93562332-93562351 | Msa0388990:CDS | 50.0% | |
| TGCCTGAAAAGCCAAAGTGG+AGG | - | chr3_1:93562335-93562354 | Msa0388990:CDS | 50.0% | |
| GCCTGAAAAGCCAAAGTGGA+GGG | - | chr3_1:93562336-93562355 | Msa0388990:CDS | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | - | chr3_1:93562351-93562370 | Msa0388990:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | - | chr3_1:93562354-93562373 | Msa0388990:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | - | chr3_1:93562365-93562384 | Msa0388990:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | - | chr3_1:93562366-93562385 | Msa0388990:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | + | chr3_1:93563698-93563717 | None:intergenic | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | - | chr3_1:93563716-93563735 | Msa0388990:intron | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | - | chr3_1:93563724-93563743 | Msa0388990:intron | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | - | chr3_1:93563728-93563747 | Msa0388990:intron | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | - | chr3_1:93563729-93563748 | Msa0388990:intron | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | + | chr3_1:93563756-93563775 | None:intergenic | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | - | chr3_1:93563756-93563775 | Msa0388990:intron | 50.0% | |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | - | chr3_1:93563846-93563865 | Msa0388990:intron | 50.0% |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | - | chr3_1:93563897-93563916 | Msa0388990:CDS | 50.0% |
| TCCTATAGGAAGGGGAAGAC+AGG | - | chr3_1:93563961-93563980 | Msa0388990:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | + | chr3_1:93563965-93563984 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | - | chr3_1:93563971-93563990 | Msa0388990:CDS | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | + | chr3_1:93564087-93564106 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | - | chr3_1:93564166-93564185 | Msa0388990:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | + | chr3_1:93564297-93564316 | None:intergenic | 50.0% | |
| TCCAGAGTAGCCACATGGAA+AGG | - | chr3_1:93564384-93564403 | Msa0388990:CDS | 50.0% | |
| CCAGAGTAGCCACATGGAAA+GGG | - | chr3_1:93564385-93564404 | Msa0388990:CDS | 50.0% | |
| !! | CGTTGGTTCGACGCTGAAAC+TGG | - | chr3_1:93561622-93561641 | Msa0388990:three_prime_UTR | 55.0% |
| AGTTGTTGTCGGGTCAGGGT+GGG | - | chr3_1:93561750-93561769 | Msa0388990:three_prime_UTR | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | - | chr3_1:93561772-93561791 | Msa0388990:three_prime_UTR | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | - | chr3_1:93561778-93561797 | Msa0388990:three_prime_UTR | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | - | chr3_1:93561782-93561801 | Msa0388990:three_prime_UTR | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | - | chr3_1:93561802-93561821 | Msa0388990:three_prime_UTR | 55.0% |
| CACGGTGGGAATGTGGTAAC+TGG | - | chr3_1:93561866-93561885 | Msa0388990:three_prime_UTR | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | - | chr3_1:93562127-93562146 | Msa0388990:CDS | 55.0% | |
| !! | CCGGTAGTGGATTTGTCTGG+TGG | - | chr3_1:93562202-93562221 | Msa0388990:CDS | 55.0% |
| !!! | GCCCTCCACTTTGGCTTTTC+AGG | + | chr3_1:93562340-93562359 | None:intergenic | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | - | chr3_1:93562384-93562403 | Msa0388990:CDS | 55.0% |
| TGGGACCCAAGTATGGCCAT+TGG | - | chr3_1:93563904-93563923 | Msa0388990:CDS | 55.0% | |
| AGCTAAGCTGGAGTTAGGCG+TGG | - | chr3_1:93564054-93564073 | Msa0388990:CDS | 55.0% | |
| CCCTTTCCATGTGGCTACTC+TGG | + | chr3_1:93564388-93564407 | None:intergenic | 55.0% | |
| GAGTTGTTGTCGGGTCAGGG+TGG | - | chr3_1:93561749-93561768 | Msa0388990:three_prime_UTR | 60.0% | |
| GGATTCGGAGCAGTCCACTC+TGG | + | chr3_1:93563863-93563882 | None:intergenic | 60.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | - | chr3_1:93561757-93561776 | Msa0388990:three_prime_UTR | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | - | chr3_1:93561760-93561779 | Msa0388990:three_prime_UTR | 65.0% | |
| CAGGGTGGGAATGTGGTGGC+TGG | - | chr3_1:93561764-93561783 | Msa0388990:three_prime_UTR | 65.0% | |
| !! | GCATCGGCTCGCATCTGCGT+GGG | - | chr3_1:93563815-93563834 | Msa0388990:intron | 65.0% |
| !! | CATCGGCTCGCATCTGCGTG+GGG | - | chr3_1:93563816-93563835 | Msa0388990:intron | 65.0% |
| TCATGCGGCTGCGCAGTTCC+AGG | - | chr3_1:93563986-93564005 | Msa0388990:CDS | 65.0% | |
| !! | GGCATCGGCTCGCATCTGCG+TGG | - | chr3_1:93563814-93563833 | Msa0388990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93561491 | 93564810 | 93561491 | ID=Msa0388990;Name=Msa0388990 |
| chr3_1 | mRNA | 93561491 | 93564810 | 93561491 | ID=Msa0388990-mRNA-1;Parent=Msa0388990;Name=Msa0388990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|429|583 |
| chr3_1 | exon | 93561491 | 93562708 | 93561491 | ID=Msa0388990-mRNA-1:exon:26484;Parent=Msa0388990-mRNA-1 |
| chr3_1 | exon | 93563848 | 93564810 | 93563848 | ID=Msa0388990-mRNA-1:exon:26483;Parent=Msa0388990-mRNA-1 |
| chr3_1 | CDS | 93563848 | 93564810 | 93563848 | ID=Msa0388990-mRNA-1:cds;Parent=Msa0388990-mRNA-1 |
| chr3_1 | CDS | 93561920 | 93562708 | 93561920 | ID=Msa0388990-mRNA-1:cds;Parent=Msa0388990-mRNA-1 |
| chr3_1 | three_prime_UTR | 93561491 | 93561919 | 93561491 | ID=Msa0388990-mRNA-1:three_prime_utr;Parent=Msa0388990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
