AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0503530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503530 MtrunA17_Chr3g0101981 97.699 1130 22 2 1 1129 1 1127 0.0 2303
Msa0503530 MtrunA17_Chr7g0214721 79.144 1098 213 4 40 1127 9 1100 0.0 1808
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503530 AT1G09620.1 70.465 1097 304 6 36 1127 1 1082 0.0 1643

Find 295 sgRNAs with CRISPR-Local

Find 580 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCATTATGCAGAGTTTATT+TGG 0.118960 3_4:-46792449 Msa0503530:CDS
TGCTGAGATTTCGGAGTTTC+AGG 0.139977 3_4:-46796649 Msa0503530:CDS
GTTGATGATCTTAAGGCTTT+TGG 0.141253 3_4:-46796588 Msa0503530:CDS
TTGCTTCAGAAGCAACTTTC+AGG 0.207186 3_4:-46792303 Msa0503530:CDS
GCGGGCAAGTTTGTCTTTCT+TGG 0.209284 3_4:-46789355 Msa0503530:three_prime_UTR
TTTCAAGTATGTTTGTTTCT+TGG 0.218336 3_4:+46795765 None:intergenic
GGCAAAAGGTAAGATGATTT+TGG 0.221738 3_4:+46793003 None:intergenic
TTGTACTGGTATGCCTATTA+AGG 0.223988 3_4:-46796910 Msa0503530:CDS
GTGTTGCCTGATGGGAAATA+TGG 0.227710 3_4:-46796234 Msa0503530:CDS
TCCTGAGAAGTTTAAGGTTT+TGG 0.229764 3_4:-46796328 Msa0503530:CDS
GCATGAAAGGATGGAGAATA+AGG 0.235175 3_4:+46797437 None:intergenic
TGCTGTCTCAAACACAAAAT+TGG 0.236931 3_4:+46792785 None:intergenic
ATCGAAAGTTGCTGCGAAAT+CGG 0.255551 3_4:-46796721 Msa0503530:CDS
GCTGTTGCTGGGAAATTTAA+AGG 0.256227 3_4:-46796750 Msa0503530:CDS
ATCATAAAAGCCAGTCTTTA+GGG 0.262278 3_4:+46792584 None:intergenic
TTCTTGAGGCGGTTTGTTAC+CGG 0.276684 3_4:+46797079 None:intergenic
GATCATAAAAGCCAGTCTTT+AGG 0.279076 3_4:+46792583 None:intergenic
TGCTCCGGATTCAGAAATTA+TGG 0.279415 3_4:-46792127 Msa0503530:CDS
CATGGAGGAATTTAACAATA+AGG 0.283589 3_4:+46790323 None:intergenic
CAAATGGCAGTCTCAAATTC+AGG 0.284726 3_4:+46791989 None:intergenic
TGGTGAAATTGAGGTTCTTC+AGG 0.296835 3_4:-46791968 Msa0503530:CDS
TGCAGCTGATGCTGATTCTT+TGG 0.300566 3_4:-46791881 Msa0503530:CDS
TGTGAGATGCGATGGGGTTT+TGG 0.302841 3_4:+46797362 None:intergenic
CTTCTTGCCCATGTAGATAC+TGG 0.308779 3_4:-46791794 Msa0503530:exon
ATTGATTAGGAGCAAGCTTT+TGG 0.311408 3_4:-46795677 Msa0503530:CDS
AATCTTCGTTAAAGCTGTTC+TGG 0.312431 3_4:+46792160 None:intergenic
ATCATTGAAGTTCCGCCATT+TGG 0.316311 3_4:-46795862 Msa0503530:CDS
TGCTCACGTTCATTTGGTCT+TGG 0.318883 3_4:-46793314 Msa0503530:CDS
AAATAAGACAACCACTTATA+AGG 0.322692 3_4:+46796624 None:intergenic
TTCAAACCATGTAAGCTCTT+TGG 0.323857 3_4:+46792740 None:intergenic
TGTAAGTAACCGTTCATATA+AGG 0.331579 3_4:+46797026 None:intergenic
TGATGACTACATGGCGTTGC+AGG 0.331946 3_4:-46795962 Msa0503530:CDS
GACGGCAATGTTAATTTCAT+TGG 0.332867 3_4:+46792650 None:intergenic
ATTTAAAGATAAGAAAGTTC+AGG 0.334149 3_4:-46795710 Msa0503530:CDS
TGGGCTTGCTCACGTTCATT+TGG 0.351731 3_4:-46793320 Msa0503530:CDS
TATTTCTGATGCTGAGATTT+CGG 0.351859 3_4:-46796658 Msa0503530:CDS
GACTTGTTTGCTTGAGCTTA+CGG 0.353807 3_4:-46796115 Msa0503530:CDS
CTAACAAAAGCATCAAAATA+AGG 0.356226 3_4:+46796519 None:intergenic
GAATTTAACTGTTGTTGATA+AGG 0.357125 3_4:-46796808 Msa0503530:CDS
GAGGTACCCTAGAGTGATTT+TGG 0.358590 3_4:+46796145 None:intergenic
TGAAGTCCAAAGCGGCGTTT+AGG 0.360778 3_4:-46795936 Msa0503530:CDS
ACAATTGTGTTCAATAGTTA+TGG 0.361800 3_4:-46789179 Msa0503530:three_prime_UTR
CTTCGCCCTAAACGCCGCTT+TGG 0.362091 3_4:+46795930 None:intergenic
GTTGGCTGTTGATGATCTTA+AGG 0.366304 3_4:-46796595 Msa0503530:CDS
TTATCAGCAGAAGCCTTAAT+AGG 0.367730 3_4:+46796897 None:intergenic
TGATGCTACACGCTTCTCTT+TGG 0.368017 3_4:-46792835 Msa0503530:CDS
AGCCTTGTGCGGATCATGAT+AGG 0.369866 3_4:-46796416 Msa0503530:CDS
AACATCCTTCACAACCTTAC+CGG 0.373035 3_4:+46796470 None:intergenic
TGTTGGCACTCTTTAGTGTA+AGG 0.377843 3_4:+46792361 None:intergenic
AAGACGGCAGTAGGACTTCC+AGG 0.383040 3_4:+46791814 None:intergenic
CCACGAGGCCAGTGATGCTT+GGG 0.383763 3_4:+46792957 None:intergenic
ATTTCTGTTGGCACTACAAC+AGG 0.392955 3_4:+46792252 None:intergenic
AGTTATGTATGCCTTTCTTA+AGG 0.393191 3_4:-46792050 Msa0503530:CDS
TGAGGTTCTTCAGGAAAACT+TGG 0.393996 3_4:-46791959 Msa0503530:CDS
AGCAACTGACTGATGATGTC+TGG 0.396202 3_4:-46793154 Msa0503530:CDS
GTGCGCAGAGACGGTTTGCC+TGG 0.396732 3_4:-46795833 Msa0503530:CDS
ACTTGTTTGCTTGAGCTTAC+GGG 0.397198 3_4:-46796114 Msa0503530:CDS
ATGAAATATCAGTGGACTTA+GGG 0.399717 3_4:+46793105 None:intergenic
TTTGCTTGAGCTTACGGGTC+AGG 0.400682 3_4:-46796109 Msa0503530:CDS
CGCTTCTCTTTGGCTGATGC+TGG 0.402032 3_4:-46792825 Msa0503530:CDS
GAGAAAATGTCCAAGTCTAC+TGG 0.403043 3_4:-46792900 Msa0503530:CDS
GCTGATTCTTTGGCCAAAGC+TGG 0.404572 3_4:-46791871 Msa0503530:CDS
TGGCACAGTTGATTGTGAAT+TGG 0.405856 3_4:-46790368 Msa0503530:three_prime_UTR
AGGATTCTATTGTTCTGATA+AGG 0.406687 3_4:-46792329 Msa0503530:CDS
GCTAGAGAGATTCAACAGTT+TGG 0.408276 3_4:-46796870 Msa0503530:CDS
CCATTTGATCTCCGGGTGTC+TGG 0.410776 3_4:-46793038 Msa0503530:CDS
TGTTGCCTGATGGGAAATAT+GGG 0.412669 3_4:-46796233 Msa0503530:CDS
GATCAGTGGTACATTACATA+TGG 0.412701 3_4:-46793449 Msa0503530:CDS
AGAATCCTGTAGATATTTGT+TGG 0.413627 3_4:+46792344 None:intergenic
TAACCGTTCATATAAGGAAA+AGG 0.416196 3_4:+46797032 None:intergenic
CTTAACTCACCCGATGTTCA+TGG 0.416441 3_4:+46790305 None:intergenic
TCGAAAGTTGCTGCGAAATC+GGG 0.418696 3_4:-46796720 Msa0503530:CDS
CACATATATAATCTCATTCA+AGG 0.419606 3_4:+46796053 None:intergenic
GAAAATGAAAATGCTGTTGC+TGG 0.422165 3_4:-46796762 Msa0503530:CDS
AATGGCGGAACTTCAATGAT+AGG 0.423472 3_4:+46795865 None:intergenic
ATGGAGGAATTTAACAATAA+GGG 0.424579 3_4:+46790324 None:intergenic
CTGTTGCTGGGAAATTTAAA+GGG 0.426091 3_4:-46796749 Msa0503530:CDS
AGCCAGTCTTTAGGGCTTCT+CGG 0.426176 3_4:+46792592 None:intergenic
GAAGTCCAAAGCGGCGTTTA+GGG 0.427851 3_4:-46795935 Msa0503530:CDS
AGGAAGCTAAGCCATTGATT+AGG 0.431420 3_4:-46795690 Msa0503530:CDS
TGCTGCGAAATCGGGTGGGC+AGG 0.432201 3_4:-46796712 Msa0503530:CDS
CTGAATTTGAGACTGCCATT+TGG 0.433504 3_4:-46791988 Msa0503530:CDS
TTTATCAATGGGAGATTATG+AGG 0.434040 3_4:-46796689 Msa0503530:CDS
GCGGCGTTTAGGGCGAAGTT+TGG 0.434256 3_4:-46795925 Msa0503530:CDS
TTTAAATTCTCCGACAATCA+TGG 0.434804 3_4:+46795726 None:intergenic
GCACAAGGCTGCCCATCTAA+TGG 0.435925 3_4:+46796429 None:intergenic
CTAGACATCACCCTCTTCTC+TGG 0.439476 3_4:+46793503 None:intergenic
CCAGACACCCGGAGATCAAA+TGG 0.441679 3_4:+46793038 None:intergenic
TCCAAAACCTTAAACTTCTC+AGG 0.443670 3_4:+46796327 None:intergenic
GTGCCATTGGAGACACGTTA+TGG 0.446519 3_4:+46790385 None:intergenic
GGCTTCTCGGAACATATAGT+TGG 0.446917 3_4:+46792605 None:intergenic
GGCACAGTTGATTGTGAATT+GGG 0.450729 3_4:-46790367 Msa0503530:three_prime_UTR
ACCTTAAACTTCTCAGGAAA+AGG 0.451795 3_4:+46796333 None:intergenic
TTTATGATCTTCAGTCTGCT+AGG 0.452231 3_4:-46792569 Msa0503530:CDS
GTAAGGTTGTGAAGGATGTT+AGG 0.455014 3_4:-46796467 Msa0503530:CDS
TCTTGAGGCGGTTTGTTACC+GGG 0.456563 3_4:+46797080 None:intergenic
GCCGCCATAATTTCTGAATC+CGG 0.458293 3_4:+46792123 None:intergenic
TCCTTCTTATGCCTTAAGAA+AGG 0.459103 3_4:+46792039 None:intergenic
TCTAATTCCTCAATTTCCTC+AGG 0.459911 3_4:+46796831 None:intergenic
TCTGCATAATGCGGACAGAT+AGG 0.462745 3_4:+46792459 None:intergenic
GATGAAATATCAGTGGACTT+AGG 0.462778 3_4:+46793104 None:intergenic
AGCTGTTCTGGAGAATGTTA+AGG 0.464607 3_4:+46792172 None:intergenic
GTCGCGTCTCATCATGATAC+AGG 0.465889 3_4:+46793378 None:intergenic
TATTGAACACAATTGTTGAC+TGG 0.466009 3_4:+46789186 None:intergenic
TTGCTTACCAAAATCACTCT+AGG 0.466850 3_4:-46796152 Msa0503530:CDS
TTCACAATCAACTGTGCCAT+TGG 0.467281 3_4:+46790372 None:intergenic
AGTGTAATAAGCCATGTAAA+TGG 0.467429 3_4:+46793238 None:intergenic
TCTTTGGCTGATGCTGGTGA+TGG 0.467750 3_4:-46792819 Msa0503530:CDS
TCTGCGCACTTGTTTCCAAA+TGG 0.468906 3_4:+46795847 None:intergenic
CCCACGAGGCCAGTGATGCT+TGG 0.470464 3_4:+46792956 None:intergenic
GCCTTTCTTAAGGCATAAGA+AGG 0.470977 3_4:-46792040 Msa0503530:CDS
TCTCAGAATTGAGCATTAAG+TGG 0.473084 3_4:+46792919 None:intergenic
TTGCAGAACAATGACATGTA+TGG 0.474570 3_4:-46793203 Msa0503530:CDS
GTTTGACCGTACATAGTCTC+AGG 0.475826 3_4:+46796267 None:intergenic
AAAAGCTTGCTCCTAATCAA+TGG 0.478814 3_4:+46795679 None:intergenic
TTATGATCTTCAGTCTGCTA+GGG 0.479017 3_4:-46792568 Msa0503530:CDS
GCAGAATCTTCTATGAGAAC+AGG 0.481745 3_4:-46792705 Msa0503530:CDS
GTTGTAGAGGCATGAAAGGA+TGG 0.483157 3_4:+46797428 None:intergenic
TATAACAAGTAGCGGCGAAA+TGG 0.485228 3_4:-46797204 Msa0503530:CDS
AACTATTCGTCAGGCAATTG+AGG 0.485860 3_4:-46792868 Msa0503530:CDS
AACCGTTCATATAAGGAAAA+GGG 0.486042 3_4:+46797033 None:intergenic
AGGTTTGATAGATGATTCAC+TGG 0.487614 3_4:+46793178 None:intergenic
CTTTGGGCTGGTTGAATCAG+TGG 0.488405 3_4:-46793340 Msa0503530:CDS
AGAGTATACGATTATTAAGA+TGG 0.489000 3_4:-46796367 Msa0503530:CDS
GGCTCACCAAAGAGCTTACA+TGG 0.489590 3_4:-46792746 Msa0503530:CDS
CTGGAGAATGTTAAGGCACT+CGG 0.489615 3_4:+46792179 None:intergenic
CTGGTATCCATTTGATCTCC+GGG 0.490566 3_4:-46793045 Msa0503530:CDS
TGCAACGCCATGTAGTCATC+AGG 0.490911 3_4:+46795964 None:intergenic
AAAGCCCCATATTTCCCATC+AGG 0.492467 3_4:+46796228 None:intergenic
ATCGGATTCGACCATTTACA+TGG 0.492952 3_4:-46793249 Msa0503530:CDS
ATCAGTGGTACATTACATAT+GGG 0.493880 3_4:-46793448 Msa0503530:CDS
ACTGGTATCCATTTGATCTC+CGG 0.494062 3_4:-46793046 Msa0503530:CDS
TCTGAAATTTCCAGTAGACT+TGG 0.494172 3_4:+46792890 None:intergenic
TAAATTCCTCCATGAACATC+GGG 0.494909 3_4:-46790314 Msa0503530:intron
TACATGGTTTGAAGAGACTC+TGG 0.495450 3_4:-46792730 Msa0503530:CDS
GGTGTTTGTTGTAGCGCATA+GGG 0.496195 3_4:-46796187 Msa0503530:CDS
TGTACGGTCAAACAAATGCT+TGG 0.496632 3_4:-46796257 Msa0503530:CDS
TTTGGGCTGGTTGAATCAGT+GGG 0.496656 3_4:-46793339 Msa0503530:CDS
TGTGTTCATATTATCCAACT+TGG 0.498220 3_4:-46789135 Msa0503530:three_prime_UTR
CCAGTACAATGAAAAGCAAA+AGG 0.498326 3_4:+46796924 None:intergenic
TTACGGGTCAGGATTTGATC+GGG 0.498956 3_4:-46796098 Msa0503530:CDS
TGAATGGGTGTTGCCGTTTG+AGG 0.499476 3_4:-46795893 Msa0503530:CDS
ATAAAGATTGGAACTGCAGC+GGG 0.500235 3_4:-46789373 Msa0503530:three_prime_UTR
TACCTTTGTGTGAGATGCGA+TGG 0.501569 3_4:+46797354 None:intergenic
TCAACAGTTTGGTAATCCTC+CGG 0.501868 3_4:-46796859 Msa0503530:CDS
CAACTTTCAGGCTCAAAGAA+AGG 0.503259 3_4:-46792291 Msa0503530:CDS
CCCAAGCATCACTGGCCTCG+TGG 0.505431 3_4:-46792957 Msa0503530:CDS
GGTACACAGGTACAGAGTGC+GGG 0.510187 3_4:-46790436 Msa0503530:three_prime_UTR
ATGAGGAAGTTGAAGGCGTC+CGG 0.510654 3_4:-46796489 Msa0503530:CDS
TGGGAGATTATGAGGAGTGT+TGG 0.511727 3_4:-46796681 Msa0503530:CDS
GAGTGCCAACAAATATCTAC+AGG 0.511965 3_4:-46792349 Msa0503530:CDS
ATGATAGGCAAAACCTCAAA+CGG 0.513536 3_4:+46795880 None:intergenic
AGTTTGGTGTCAAGGATGAA+TGG 0.514319 3_4:-46795909 Msa0503530:CDS
ACCTTTGTGTGAGATGCGAT+GGG 0.515246 3_4:+46797355 None:intergenic
AAGAGGGTGATGTCTAGATC+TGG 0.516950 3_4:-46793497 Msa0503530:CDS
CCAAGCATCACTGGCCTCGT+GGG 0.518034 3_4:-46792956 Msa0503530:CDS
TTACATATGGGGAGTCAGAA+TGG 0.519024 3_4:-46793436 Msa0503530:CDS
ATGAACGGTTACTTACATCT+AGG 0.519049 3_4:-46797020 Msa0503530:CDS
GGGTGGGCAGGTTTATCAAT+GGG 0.519661 3_4:-46796700 Msa0503530:CDS
ATAATCTCATTCAAGGAAAG+AGG 0.519727 3_4:+46796060 None:intergenic
AGGTGTTTGTTGTAGCGCAT+AGG 0.520012 3_4:-46796188 Msa0503530:CDS
AGATGCATGAGATCCAGCTT+TGG 0.520864 3_4:+46791858 None:intergenic
GCACTCTTTAGTGTAAGGTC+AGG 0.521329 3_4:+46792366 None:intergenic
AGAACCTCAATTTCACCAAA+TGG 0.521457 3_4:+46791973 None:intergenic
TAGGGCGAAGTTTGGTGTCA+AGG 0.522625 3_4:-46795917 Msa0503530:CDS
GTACGGTCAAACAAATGCTT+GGG 0.522983 3_4:-46796256 Msa0503530:CDS
CATGTGAACTTGATTTCTGT+TGG 0.524348 3_4:+46792240 None:intergenic
AGAAATCAAGTTCACATGCT+TGG 0.526016 3_4:-46792235 Msa0503530:CDS
TTCTTGCTGCGGCGACGTTG+AGG 0.526676 3_4:-46796290 Msa0503530:CDS
TGAATGAACAATTTGACGGT+TGG 0.526815 3_4:-46792206 Msa0503530:CDS
AAATTTCAGAACTATTCGTC+AGG 0.526947 3_4:-46792877 Msa0503530:CDS
GATACAGGCTCATGTTAGAC+AGG 0.527701 3_4:+46793393 None:intergenic
CATGATAGGGCTAGTGGTGA+AGG 0.527937 3_4:-46796402 Msa0503530:CDS
GATAAGGATAAGAATGCTGC+TGG 0.527996 3_4:-46796792 Msa0503530:CDS
AGATTGTCATGTGGGGCTAG+TGG 0.528796 3_4:-46792537 Msa0503530:CDS
TACGATTATTAAGATGGAGG+TGG 0.529151 3_4:-46796361 Msa0503530:CDS
GCGGCGTTTCATCGTCTTCG+TGG 0.530218 3_4:-46796963 Msa0503530:CDS
AGTGTGGTTGTAAAGGCAAA+AGG 0.530282 3_4:+46792989 None:intergenic
ATGCTTGGGTGTTGCCTGAT+GGG 0.531636 3_4:-46796242 Msa0503530:CDS
GTTCCTAGTCGAGTCTCTAT+CGG 0.532586 3_4:-46793267 Msa0503530:CDS
ACTGACGGAACCATGATTGT+CGG 0.533536 3_4:-46795736 Msa0503530:CDS
GCAGTAGGACTTCCAGGGGA+TGG 0.535987 3_4:+46791820 None:intergenic
AAATTGCAGTGTGGTTGTAA+AGG 0.536059 3_4:+46792982 None:intergenic
AAATGGCAGTCTCAAATTCA+GGG 0.536793 3_4:+46791990 None:intergenic
CATGAAAGGATGGAGAATAA+GGG 0.538850 3_4:+46797438 None:intergenic
AGAGACAATCCTCCATCCCC+TGG 0.540376 3_4:-46791832 Msa0503530:CDS
GAAGTTGAAGGCGTCCGGTA+AGG 0.543141 3_4:-46796484 Msa0503530:CDS
GAGTGTTGTAGAGGCATGAA+AGG 0.544797 3_4:+46797424 None:intergenic
AGTTTCAGGATCCTTATAAG+TGG 0.545032 3_4:-46796635 Msa0503530:CDS
GGTTTGGTTGTGATTGGAGA+AGG 0.546351 3_4:-46796566 Msa0503530:CDS
ACTGCCATTTGGTGAAATTG+AGG 0.547354 3_4:-46791977 Msa0503530:CDS
ATGAGTATAGATTGTCATGT+GGG 0.547862 3_4:-46792545 Msa0503530:CDS
GCTTTACAACAGAGTTCTGT+AGG 0.548653 3_4:-46792102 Msa0503530:CDS
GACTCGATCAAGAGACAGAT+AGG 0.549673 3_4:-46791937 Msa0503530:CDS
TGAAGCTTGAGTTTGAGTAC+TGG 0.550901 3_4:-46793064 Msa0503530:CDS
TTCAAAAGAGGTGGTAGATG+TGG 0.552350 3_4:-46791914 Msa0503530:CDS
AAGGAAAGAGGAGATTTCAC+AGG 0.552909 3_4:+46796072 None:intergenic
TTCCGAGAAGCCCTAAAGAC+TGG 0.553545 3_4:-46792594 Msa0503530:CDS
CGGGTGGGCAGGTTTATCAA+TGG 0.553890 3_4:-46796701 Msa0503530:CDS
GCAACTGACTGATGATGTCT+GGG 0.554089 3_4:-46793153 Msa0503530:CDS
CTTACGGGTCAGGATTTGAT+CGG 0.555572 3_4:-46796099 Msa0503530:CDS
TCAAAGAAAGGAAATAAGAA+AGG 0.556298 3_4:-46792279 Msa0503530:CDS
TGACTCTCCTGATGACTACA+TGG 0.556661 3_4:-46795971 Msa0503530:CDS
GTGGCATATGAGGAAGTTGA+AGG 0.557101 3_4:-46796496 Msa0503530:CDS
AAGAAACAAACATACTTGAA+AGG 0.557816 3_4:-46795763 Msa0503530:CDS
AAACTTACCCAGTATCTACA+TGG 0.559581 3_4:+46791786 None:intergenic
GTACACAGGTACAGAGTGCG+GGG 0.563033 3_4:-46790435 Msa0503530:three_prime_UTR
TGGAAACAAGTGCGCAGAGA+CGG 0.563991 3_4:-46795842 Msa0503530:CDS
TTAAATTCCTCCATGAACAT+CGG 0.564025 3_4:-46790315 Msa0503530:three_prime_UTR
AAAGTTGCTGCGAAATCGGG+TGG 0.565171 3_4:-46796717 Msa0503530:CDS
CAGCAAATGCGGCAATTCTG+AGG 0.565599 3_4:-46792767 Msa0503530:CDS
GTTTGGTGTCAAGGATGAAT+GGG 0.567640 3_4:-46795908 Msa0503530:CDS
TATGTGAATGAACAATTTGA+CGG 0.567755 3_4:-46792210 Msa0503530:CDS
CTGAATCAAATTCGCGGCGG+CGG 0.568979 3_4:-46797227 Msa0503530:CDS
TGCTTACCAAAATCACTCTA+GGG 0.570670 3_4:-46796151 Msa0503530:CDS
GCCTTGTGCGGATCATGATA+GGG 0.570817 3_4:-46796415 Msa0503530:CDS
TACTTGAAAGGTTTCACTGA+CGG 0.572030 3_4:-46795751 Msa0503530:CDS
GAGACAGATAGGTTCAAAAG+AGG 0.573315 3_4:-46791926 Msa0503530:CDS
TTAATAATCGTATACTCTTG+CGG 0.573987 3_4:+46796372 None:intergenic
GTCTTGGCACACGTATACCA+TGG 0.575312 3_4:-46793298 Msa0503530:CDS
GATAAAGATTGGAACTGCAG+CGG 0.577680 3_4:-46789374 Msa0503530:three_prime_UTR
GGCGTCCGGTAAGGTTGTGA+AGG 0.578793 3_4:-46796475 Msa0503530:CDS
GTACAGTGAGCCAGAGAAGA+GGG 0.580499 3_4:-46793513 Msa0503530:CDS
CCTCGTGGGTTTAGATGCAA+TGG 0.582231 3_4:-46792942 Msa0503530:CDS
ATGGGCAAGAAGACGGCAGT+AGG 0.584751 3_4:+46791805 None:intergenic
TTCTTGCCCATGTAGATACT+GGG 0.588266 3_4:-46791793 Msa0503530:intron
AATGCTTGGGTGTTGCCTGA+TGG 0.597981 3_4:-46796243 Msa0503530:CDS
GCGCACTTGTTTCCAAATGG+CGG 0.598780 3_4:+46795850 None:intergenic
GTAGGACTTCCAGGGGATGG+AGG 0.599100 3_4:+46791823 None:intergenic
CAAGTCTTCAAATCTGAACC+CGG 0.601145 3_4:-46797098 Msa0503530:CDS
ACATCATCAGTCAGTTGCTG+AGG 0.601580 3_4:+46793158 None:intergenic
TATCATGATGAGACGCGACA+TGG 0.601773 3_4:-46793374 Msa0503530:CDS
CAAATAAACTCTGCATAATG+CGG 0.603242 3_4:+46792450 None:intergenic
AAGTAGCGGCGAAATGGCGT+CGG 0.604555 3_4:-46797198 Msa0503530:CDS
TATCTACATGGGCAAGAAGA+CGG 0.604927 3_4:+46791798 None:intergenic
GCCCTATCATGATCCGCACA+AGG 0.605847 3_4:+46796414 None:intergenic
TTGAGGCCTGAGACTATGTA+CGG 0.606810 3_4:-46796273 Msa0503530:CDS
ACAGATAGGTTCAAAAGAGG+TGG 0.609164 3_4:-46791923 Msa0503530:CDS
AAAATGAAAATGCTGTTGCT+GGG 0.609603 3_4:-46796761 Msa0503530:CDS
ATATCAGTGGACTTAGGGAA+AGG 0.609848 3_4:+46793110 None:intergenic
ATTAGATGGGCAGCCTTGTG+CGG 0.610646 3_4:-46796427 Msa0503530:CDS
TGTGTTTGAGACAGCAAATG+CGG 0.611103 3_4:-46792778 Msa0503530:CDS
AGGTCAGGAGCATCCGCTGT+TGG 0.612362 3_4:+46792381 None:intergenic
TCCATCAAAATAGACAACAT+AGG 0.613893 3_4:+46796027 None:intergenic
AACGGATGATGAAATATCAG+TGG 0.613984 3_4:+46793097 None:intergenic
GTTTGTTGTAGCGCATAGGG+CGG 0.614359 3_4:-46796184 Msa0503530:CDS
TCTTGGCACACGTATACCAT+GGG 0.614967 3_4:-46793297 Msa0503530:CDS
GGTAACAAACCGCCTCAAGA+AGG 0.617856 3_4:-46797077 Msa0503530:CDS
TAACCATAACGTGTCTCCAA+TGG 0.617946 3_4:-46790388 Msa0503530:three_prime_UTR
TGTACAGTGAGCCAGAGAAG+AGG 0.620900 3_4:-46793514 Msa0503530:CDS
TCAACACTGAATCAAATTCG+CGG 0.621842 3_4:-46797233 Msa0503530:CDS
ACTAGGAACTGTTCATCCCA+TGG 0.622213 3_4:+46793281 None:intergenic
GAAGGCAGGTTGGCCAACAG+CGG 0.624208 3_4:-46792394 Msa0503530:CDS
AGACGGCAGTAGGACTTCCA+GGG 0.624579 3_4:+46791815 None:intergenic
AGGAGAGTCACTAGGCACAC+TGG 0.625764 3_4:+46795984 None:intergenic
ACACAGGTACAGAGTGCGGG+GGG 0.627437 3_4:-46790433 Msa0503530:three_prime_UTR
AACTTCAGCATGTTCTCACA+AGG 0.630542 3_4:+46789325 None:intergenic
AGGTACACAGGTACAGAGTG+CGG 0.632363 3_4:-46790437 Msa0503530:three_prime_UTR
TAGTCATCAGGAGAGTCACT+AGG 0.633101 3_4:+46795976 None:intergenic
TTAAGATCATCAACAGCCAA+CGG 0.634238 3_4:+46796597 None:intergenic
AGCAAACAAGTCGGTCTCTG+AGG 0.634515 3_4:+46796126 None:intergenic
AGGCACACTGGTCACCACTC+CGG 0.645744 3_4:+46795996 None:intergenic
TAGACACTACACAGGTACAC+AGG 0.646935 3_4:-46790449 Msa0503530:intron
GTATACGATTATTAAGATGG+AGG 0.648854 3_4:-46796364 Msa0503530:CDS
TGAGATCTTTACCAGACACC+CGG 0.651024 3_4:+46793027 None:intergenic
GGCGGCGGTATAACAAGTAG+CGG 0.653648 3_4:-46797212 Msa0503530:CDS
GTTGCCTGATGGGAAATATG+GGG 0.656515 3_4:-46796232 Msa0503530:CDS
TCCGGATTCAGAAATTATGG+CGG 0.658530 3_4:-46792124 Msa0503530:CDS
AACTTACCCAGTATCTACAT+GGG 0.658872 3_4:+46791787 None:intergenic
AGTGCTGTAGAGTGTTGTAG+AGG 0.664322 3_4:+46797415 None:intergenic
GATGAGTATAGATTGTCATG+TGG 0.664637 3_4:-46792546 Msa0503530:CDS
TCAGTGGTACATTACATATG+GGG 0.664658 3_4:-46793447 Msa0503530:CDS
CCCCATCGCATCTCACACAA+AGG 0.664915 3_4:-46797356 Msa0503530:intron
AAGTTGCTGCGAAATCGGGT+GGG 0.665724 3_4:-46796716 Msa0503530:CDS
ACACGATCAGCATAGATAGA+CGG 0.667879 3_4:+46792678 None:intergenic
TACACAGGTACAGAGTGCGG+GGG 0.680047 3_4:-46790434 Msa0503530:three_prime_UTR
CACGAGGCCAGTGATGCTTG+GGG 0.680088 3_4:+46792958 None:intergenic
GCGGATCATGATAGGGCTAG+TGG 0.684305 3_4:-46796408 Msa0503530:CDS
TGAGTATAGATTGTCATGTG+GGG 0.690050 3_4:-46792544 Msa0503530:CDS
CCTTTGTGTGAGATGCGATG+GGG 0.691832 3_4:+46797356 None:intergenic
CGATCAGCATAGATAGACGG+TGG 0.694172 3_4:+46792681 None:intergenic
TTCGAAACTTGAATTCGCCG+CGG 0.695295 3_4:-46796982 Msa0503530:CDS
GACGGCAGTAGGACTTCCAG+GGG 0.699615 3_4:+46791816 None:intergenic
AATCCGATAGAGACTCGACT+AGG 0.700123 3_4:+46793264 None:intergenic
AGATCATCAACAGCCAACGG+CGG 0.709945 3_4:+46796600 None:intergenic
TTGTAGCTCTGACAGATCAG+TGG 0.710938 3_4:-46793463 Msa0503530:CDS
GATGGATAAAGGTACCGGAG+TGG 0.717470 3_4:-46796010 Msa0503530:CDS
ACATAAACAAGAGAAGATAG+CGG 0.718908 3_4:+46797391 None:intergenic
GTAAGCTCAAGCAAACAAGT+CGG 0.723183 3_4:+46796117 None:intergenic
AACTCACCCGATGTTCATGG+AGG 0.726893 3_4:+46790308 None:intergenic
ACGAAGACGATGAAACGCCG+CGG 0.739429 3_4:+46796965 None:intergenic
GCAGGATCTGAAGTCCAAAG+CGG 0.754939 3_4:-46795944 Msa0503530:CDS
CCATTGCATCTAAACCCACG+AGG 0.758499 3_4:+46792942 None:intergenic
GCTTGGGGAAAATTGCAGTG+TGG 0.764049 3_4:+46792973 None:intergenic
ACACTGAATCAAATTCGCGG+CGG 0.789343 3_4:-46797230 Msa0503530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATATTGATAATTTTAAA+AGG + chr3_4:46790934-46790953 None:intergenic 10.0%
!!! ATAACTTATTTTAATTCTAT+TGG + chr3_4:46791243-46791262 None:intergenic 10.0%
!! AAAAAAAGAAAATATTGATA+AGG + chr3_4:46792067-46792086 None:intergenic 10.0%
!! ATAAAATAATGAAGTTATTA+TGG + chr3_4:46792513-46792532 None:intergenic 10.0%
!!! TAATAACTTCATTATTTTAT+AGG - chr3_4:46792513-46792532 Msa0503530:CDS 10.0%
!!! AATAACTTCATTATTTTATA+GGG - chr3_4:46792514-46792533 Msa0503530:CDS 10.0%
!!! GGTTTTAAATAAAAAAAAAA+GGG + chr3_4:46795846-46795865 None:intergenic 10.0%
!!! TGGTTTTAAATAAAAAAAAA+AGG + chr3_4:46795847-46795866 None:intergenic 10.0%
!!! TTTTTTTTTATTTAAAACCA+AGG - chr3_4:46795847-46795866 Msa0503530:CDS 10.0%
!! TTAAATAATGAATAATTCAT+AGG + chr3_4:46796358-46796377 None:intergenic 10.0%
!! AATGAAAAAATTATTGAAAT+CGG + chr3_4:46796383-46796402 None:intergenic 10.0%
!! AAATAGTCAATATTATGTAA+AGG - chr3_4:46791100-46791119 Msa0503530:intron 15.0%
!!! ATTTAAAATTTTAGTTGTCA+TGG + chr3_4:46791314-46791333 None:intergenic 15.0%
!! TGTCTTAAAATATACAATAT+AGG + chr3_4:46791534-46791553 None:intergenic 15.0%
!!! ATAAAATAATAGTGTTACTA+TGG + chr3_4:46792279-46792298 None:intergenic 15.0%
!!! ATGATTTGTTTTTACATTAT+CGG - chr3_4:46792362-46792381 Msa0503530:CDS 15.0%
!! AATTTCTACTTTCTTAAAAT+AGG - chr3_4:46794773-46794792 Msa0503530:intron 15.0%
!! TATGATATATACATTAAGAA+CGG + chr3_4:46794884-46794903 None:intergenic 15.0%
!!! TTTAAAACACAATAAAAACA+TGG + chr3_4:46794947-46794966 None:intergenic 15.0%
!! CTAAAAATACAAATTAGTAT+TGG - chr3_4:46795322-46795341 Msa0503530:intron 15.0%
!! ATGAAAAAATTATTGAAATC+GGG + chr3_4:46796382-46796401 None:intergenic 15.0%
!! AAATATTAATTACTGTGAAA+GGG + chr3_4:46796414-46796433 None:intergenic 15.0%
!! ATTTAAAGATAAGAAAGTTC+AGG - chr3_4:46790821-46790840 Msa0503530:intron 20.0%
!!! TTCAATTTTTTTTACCAACT+TGG - chr3_4:46790960-46790979 Msa0503530:intron 20.0%
!!! TCAATTTTTTTTACCAACTT+GGG - chr3_4:46790961-46790980 Msa0503530:intron 20.0%
!! AAGTAGATATGTAAAGATAA+TGG - chr3_4:46791362-46791381 Msa0503530:intron 20.0%
!! AGTAGATATGTAAAGATAAT+GGG - chr3_4:46791363-46791382 Msa0503530:intron 20.0%
!!! ACAATATAGGTTGAATAATT+TGG + chr3_4:46791521-46791540 None:intergenic 20.0%
!!! GTTCTTAACTTATTTTTGTA+AGG - chr3_4:46791819-46791838 Msa0503530:CDS 20.0%
!! TCTATAAAAATCAAATACCA+TGG + chr3_4:46792154-46792173 None:intergenic 20.0%
!! AAAGTATAGTTGTACATTAT+TGG - chr3_4:46792330-46792349 Msa0503530:CDS 20.0%
!!! TTTTTATAATTCCGTATTGA+AGG - chr3_4:46792588-46792607 Msa0503530:CDS 20.0%
!!! ACTTATAATTTTACACTTTC+AGG - chr3_4:46792983-46793002 Msa0503530:CDS 20.0%
!!! AAGCTTCATTTTTTCTAAAA+CGG + chr3_4:46793455-46793474 None:intergenic 20.0%
!! GTAATCAAATCAATTAAGAA+AGG + chr3_4:46794810-46794829 None:intergenic 20.0%
!! GTTCTTAATGTATATATCAT+AGG - chr3_4:46794883-46794902 Msa0503530:intron 20.0%
!! TAAAACCTTTCATAAGATTT+AGG + chr3_4:46795649-46795668 None:intergenic 20.0%
!!! TCTTCTTTTTGTTATTATGT+TGG + chr3_4:46795734-46795753 None:intergenic 20.0%
!! ATAATGAATAATTCATAGGT+CGG + chr3_4:46796354-46796373 None:intergenic 20.0%
!! AATATTAATTACTGTGAAAG+GGG + chr3_4:46796413-46796432 None:intergenic 20.0%
!! CAAATATTAATTACTGTGAA+AGG + chr3_4:46796415-46796434 None:intergenic 20.0%
!! TCACAGTAATTAATATTTGT+TGG - chr3_4:46796416-46796435 Msa0503530:CDS 20.0%
!!! AATATTTGTTGGTTGAAATT+TGG - chr3_4:46796427-46796446 Msa0503530:CDS 20.0%
!!! ATTTGGTTTAATTGCTTTTA+AGG - chr3_4:46796497-46796516 Msa0503530:CDS 20.0%
!!! TGTTTTGTCAAATTACAAAA+GGG + chr3_4:46796710-46796729 None:intergenic 20.0%
!!! TTGTTTTGTCAAATTACAAA+AGG + chr3_4:46796711-46796730 None:intergenic 20.0%
!!! TTAAAAAAATTTGCTGCAAT+TGG - chr3_4:46797008-46797027 Msa0503530:CDS 20.0%
!!! ATGAATTTTGAGATAAAGAT+TGG - chr3_4:46797146-46797165 Msa0503530:CDS 20.0%
!! TTGGAAAAATAGTTATGATT+TGG - chr3_4:46797415-46797434 Msa0503530:five_prime_UTR 20.0%
! TCGAATCAAAAGTTCAAAAA+TGG - chr3_4:46789398-46789417 Msa0503530:three_prime_UTR 25.0%
! AATCAAAAGTTCAAAAATGG+TGG - chr3_4:46789401-46789420 Msa0503530:three_prime_UTR 25.0%
! ATCAAAAGTTCAAAAATGGT+GGG - chr3_4:46789402-46789421 Msa0503530:three_prime_UTR 25.0%
! GAATTTAACTGTTGTTGATA+AGG - chr3_4:46789723-46789742 Msa0503530:intron 25.0%
! AAATAAGACAACCACTTATA+AGG + chr3_4:46789910-46789929 None:intergenic 25.0%
!!! CTAACAAAAGCATCAAAATA+AGG + chr3_4:46790015-46790034 None:intergenic 25.0%
!!! CTTATTTTGATGCTTTTGTT+AGG - chr3_4:46790013-46790032 Msa0503530:intron 25.0%
! TTAATAATCGTATACTCTTG+CGG + chr3_4:46790162-46790181 None:intergenic 25.0%
! AGAGTATACGATTATTAAGA+TGG - chr3_4:46790164-46790183 Msa0503530:intron 25.0%
! CACATATATAATCTCATTCA+AGG + chr3_4:46790481-46790500 None:intergenic 25.0%
!!! TTGTCTATTTTGATGGATAA+AGG - chr3_4:46790510-46790529 Msa0503530:intron 25.0%
!! TTTCAAGTATGTTTGTTTCT+TGG + chr3_4:46790769-46790788 None:intergenic 25.0%
! AAGAAACAAACATACTTGAA+AGG - chr3_4:46790768-46790787 Msa0503530:intron 25.0%
!!! CAATTTTTTTTACCAACTTG+GGG - chr3_4:46790962-46790981 Msa0503530:intron 25.0%
! CAAGTTATGTATCTTCTTAT+TGG - chr3_4:46791176-46791195 Msa0503530:intron 25.0%
!!! ATTCTATTGGTGCTATTAAA+TGG + chr3_4:46791230-46791249 None:intergenic 25.0%
! TATCTTAAGATCATCATTGT+AGG + chr3_4:46791559-46791578 None:intergenic 25.0%
! AATGATGATCTTAAGATATG+TGG - chr3_4:46791561-46791580 Msa0503530:intron 25.0%
! CAAAAATAAGTTAAGAACCT+TGG + chr3_4:46791817-46791836 None:intergenic 25.0%
!!! ATCTTTGGTTTGTTTTCTTT+GGG + chr3_4:46791912-46791931 None:intergenic 25.0%
!!! TATCTTTGGTTTGTTTTCTT+TGG + chr3_4:46791913-46791932 None:intergenic 25.0%
! AAGTCAAGTTATTGATAAGT+AGG + chr3_4:46791982-46792001 None:intergenic 25.0%
!! ATCAATAACTTGACTTTTGA+AGG - chr3_4:46791986-46792005 Msa0503530:CDS 25.0%
! ATAATGAAGTTATTATGGCT+AGG + chr3_4:46792508-46792527 None:intergenic 25.0%
!! TTTTGAATTCTACTCCATAT+TGG - chr3_4:46792636-46792655 Msa0503530:CDS 25.0%
!!! TCCATATTGGTAATTTTAGA+AGG - chr3_4:46792649-46792668 Msa0503530:CDS 25.0%
!!! TCCTTCTAAAATTACCAATA+TGG + chr3_4:46792653-46792672 None:intergenic 25.0%
! CTTTGCATTCTTATTACATA+TGG - chr3_4:46792702-46792721 Msa0503530:CDS 25.0%
! AACAAATTATGAGATGTATG+AGG + chr3_4:46792741-46792760 None:intergenic 25.0%
!! CATTTTGTGCTAATAATGAA+TGG - chr3_4:46792856-46792875 Msa0503530:CDS 25.0%
!!! AGAGAAATTTTGAAGAAGAA+TGG - chr3_4:46794105-46794124 Msa0503530:intron 25.0%
! TCAAAGAAAGGAAATAAGAA+AGG - chr3_4:46794252-46794271 Msa0503530:intron 25.0%
! TATGTGAATGAACAATTTGA+CGG - chr3_4:46794321-46794340 Msa0503530:intron 25.0%
! ATCAAATCAATTAAGAAAGG+AGG + chr3_4:46794807-46794826 None:intergenic 25.0%
!!! ATTGTTAGTTTTGATGGTTT+TGG + chr3_4:46795072-46795091 None:intergenic 25.0%
! AACCATCAAAACTAACAATA+AGG - chr3_4:46795073-46795092 Msa0503530:intron 25.0%
! ACCATCAAAACTAACAATAA+GGG - chr3_4:46795074-46795093 Msa0503530:intron 25.0%
! TGAGCATGATATATGAAATT+TGG + chr3_4:46795269-46795288 None:intergenic 25.0%
! TCCAAAAAGTTATGAAATAG+CGG + chr3_4:46795514-46795533 None:intergenic 25.0%
! CACCAAAATTCAAAACATTA+CGG - chr3_4:46795694-46795713 Msa0503530:CDS 25.0%
!!! TTCCGTAATGTTTTGAATTT+TGG + chr3_4:46795699-46795718 None:intergenic 25.0%
! TTTCACGTAAAATGAAATAG+CGG - chr3_4:46795882-46795901 Msa0503530:CDS 25.0%
! ATGGAGGAATTTAACAATAA+GGG + chr3_4:46796210-46796229 None:intergenic 25.0%
! AAACACATGACAAAATATGA+AGG + chr3_4:46796307-46796326 None:intergenic 25.0%
!!! TCATGTGTTTTTTGTTTTGA+TGG - chr3_4:46796317-46796336 Msa0503530:CDS 25.0%
! TAATGAATAATTCATAGGTC+GGG + chr3_4:46796353-46796372 None:intergenic 25.0%
! TCTAGATTTATGGATAGATT+TGG - chr3_4:46796480-46796499 Msa0503530:CDS 25.0%
!! TGGTTTTTCACGAAATTTTT+TGG - chr3_4:46796548-46796567 Msa0503530:CDS 25.0%
!! TTTTGTCAAATTACAAAAGG+GGG + chr3_4:46796708-46796727 None:intergenic 25.0%
!! GTTTTGTCAAATTACAAAAG+GGG + chr3_4:46796709-46796728 None:intergenic 25.0%
! TGTAATTTGACAAAACAAAC+AGG - chr3_4:46796713-46796732 Msa0503530:CDS 25.0%
!! TTCAAAAGCATATGTTAACT+AGG - chr3_4:46796876-46796895 Msa0503530:CDS 25.0%
! TCATCGATATATTATCTGTT+TGG - chr3_4:46796901-46796920 Msa0503530:CDS 25.0%
!! TTTTATTAGAGAAGAGGTAA+TGG - chr3_4:46797033-46797052 Msa0503530:CDS 25.0%
! ACAATTGTGTTCAATAGTTA+TGG - chr3_4:46797352-46797371 Msa0503530:intron 25.0%
!!! TCATAACTATTTTTCCAAGT+TGG + chr3_4:46797413-46797432 None:intergenic 25.0%
ACATAAACAAGAGAAGATAG+CGG + chr3_4:46789143-46789162 None:intergenic 30.0%
! AAGAGAAAGAAAGGGTTTTA+GGG + chr3_4:46789211-46789230 None:intergenic 30.0%
! AAAGAGAAAGAAAGGGTTTT+AGG + chr3_4:46789212-46789231 None:intergenic 30.0%
GAGAAGAAAAGAGAAAGAAA+GGG + chr3_4:46789219-46789238 None:intergenic 30.0%
AGAGAAGAAAAGAGAAAGAA+AGG + chr3_4:46789220-46789239 None:intergenic 30.0%
! TAGAAATCTTTTACACCTGA+TGG + chr3_4:46789275-46789294 None:intergenic 30.0%
! AAGAATTTTTCACCTTCTTG+AGG + chr3_4:46789469-46789488 None:intergenic 30.0%
CAAGAAGGTGAAAAATTCTT+CGG - chr3_4:46789469-46789488 Msa0503530:intron 30.0%
! TTCCCTTTTCCTTATATGAA+CGG - chr3_4:46789496-46789515 Msa0503530:intron 30.0%
AACCGTTCATATAAGGAAAA+GGG + chr3_4:46789501-46789520 None:intergenic 30.0%
TAACCGTTCATATAAGGAAA+AGG + chr3_4:46789502-46789521 None:intergenic 30.0%
TGTAAGTAACCGTTCATATA+AGG + chr3_4:46789508-46789527 None:intergenic 30.0%
AAAATGAAAATGCTGTTGCT+GGG - chr3_4:46789770-46789789 Msa0503530:intron 30.0%
TTTATCAATGGGAGATTATG+AGG - chr3_4:46789842-46789861 Msa0503530:intron 30.0%
! TATTTCTGATGCTGAGATTT+CGG - chr3_4:46789873-46789892 Msa0503530:intron 30.0%
!! TTGATGATCTTAAGGCTTTT+GGG - chr3_4:46789944-46789963 Msa0503530:intron 30.0%
!! ATTTTGATGCTTTTGTTAGG+TGG - chr3_4:46790016-46790035 Msa0503530:intron 30.0%
GTATACGATTATTAAGATGG+AGG - chr3_4:46790167-46790186 Msa0503530:intron 30.0%
!!! GGCTTTTGAGATTAATGAAA+CGG - chr3_4:46790320-46790339 Msa0503530:three_prime_UTR 30.0%
!!! TTTTGAGATTAATGAAACGG+AGG - chr3_4:46790323-46790342 Msa0503530:three_prime_UTR 30.0%
ATAATCTCATTCAAGGAAAG+AGG + chr3_4:46790474-46790493 None:intergenic 30.0%
!! TCCTATGTTGTCTATTTTGA+TGG - chr3_4:46790503-46790522 Msa0503530:intron 30.0%
TCCATCAAAATAGACAACAT+AGG + chr3_4:46790507-46790526 None:intergenic 30.0%
!! ATTTTGATGGATAAAGGTAC+CGG - chr3_4:46790516-46790535 Msa0503530:intron 30.0%
TTTAAATTCTCCGACAATCA+TGG + chr3_4:46790808-46790827 None:intergenic 30.0%
!!! TCTAGTTTTGTGTATAGTTG+AGG + chr3_4:46791036-46791055 None:intergenic 30.0%
AGAAGATACATAACTTGATG+AGG + chr3_4:46791173-46791192 None:intergenic 30.0%
AAATGGTTAGTAGACAATTG+AGG + chr3_4:46791213-46791232 None:intergenic 30.0%
GCAAACAATCTACTTTGATT+TGG + chr3_4:46791342-46791361 None:intergenic 30.0%
!! TTTTTGAGAGTTAGTCAAGA+TGG - chr3_4:46791441-46791460 Msa0503530:intron 30.0%
!! TTTTGAGAGTTAGTCAAGAT+GGG - chr3_4:46791442-46791461 Msa0503530:intron 30.0%
! ATAGGTTGAATAATTTGGTC+AGG + chr3_4:46791516-46791535 None:intergenic 30.0%
GATATGTGGCATTATAACAA+AGG - chr3_4:46791575-46791594 Msa0503530:intron 30.0%
TAGTGTAAGTCAACTGATAA+AGG + chr3_4:46791656-46791675 None:intergenic 30.0%
! TATGTCTTAAATTTGCTTCC+TGG - chr3_4:46791765-46791784 Msa0503530:intron 30.0%
AAATAAGTTAAGAACCTTGG+TGG + chr3_4:46791814-46791833 None:intergenic 30.0%
TTATGTAGTCTCAAAACTCT+AGG + chr3_4:46791849-46791868 None:intergenic 30.0%
!!! TACCACGTTGTTTTTGTATT+TGG - chr3_4:46792016-46792035 Msa0503530:CDS 30.0%
TATTGATAAGGCAATAGAGT+AGG + chr3_4:46792055-46792074 None:intergenic 30.0%
AAAAAATTGTGTGACCATTG+AGG + chr3_4:46792219-46792238 None:intergenic 30.0%
ATTTCATTGTGTAACCATTG+AGG + chr3_4:46792450-46792469 None:intergenic 30.0%
AATGTTTAGTCGTACATCAT+CGG - chr3_4:46792556-46792575 Msa0503530:CDS 30.0%
CATGTAGTAAACCTTCAATA+CGG + chr3_4:46792602-46792621 None:intergenic 30.0%
TTAGAAGGAAACTACAGTAA+AGG - chr3_4:46792664-46792683 Msa0503530:CDS 30.0%
!! AATTTCTAGCTGTAATGAAC+AGG + chr3_4:46792781-46792800 None:intergenic 30.0%
CATTACAGCTAGAAATTTAG+AGG - chr3_4:46792784-46792803 Msa0503530:CDS 30.0%
!! TAATTTTACACTTTCAGGTG+AGG - chr3_4:46792988-46793007 Msa0503530:CDS 30.0%
ATCAGTGGTACATTACATAT+GGG - chr3_4:46793083-46793102 Msa0503530:CDS 30.0%
AGTGTAATAAGCCATGTAAA+TGG + chr3_4:46793296-46793315 None:intergenic 30.0%
! ATGAAATATCAGTGGACTTA+GGG + chr3_4:46793429-46793448 None:intergenic 30.0%
AAATTTCAGAACTATTCGTC+AGG - chr3_4:46793654-46793673 Msa0503530:intron 30.0%
!!! ATTTTGCTCAGTTGTTTTGA+CGG + chr3_4:46793902-46793921 None:intergenic 30.0%
ATCATAAAAGCCAGTCTTTA+GGG + chr3_4:46793950-46793969 None:intergenic 30.0%
ATGAGTATAGATTGTCATGT+GGG - chr3_4:46793986-46794005 Msa0503530:intron 30.0%
!! TTTGAAGAAGAATGGTTTTG+TGG - chr3_4:46794113-46794132 Msa0503530:intron 30.0%
AGAATCCTGTAGATATTTGT+TGG + chr3_4:46794190-46794209 None:intergenic 30.0%
AGGATTCTATTGTTCTGATA+AGG - chr3_4:46794202-46794221 Msa0503530:intron 30.0%
AGTTATGTATGCCTTTCTTA+AGG - chr3_4:46794481-46794500 Msa0503530:intron 30.0%
AAATCAATTAAGAAAGGAGG+AGG + chr3_4:46794804-46794823 None:intergenic 30.0%
ACTATACTAGTATTCTCACT+TGG + chr3_4:46794979-46794998 None:intergenic 30.0%
GAGAATACTAGTATAGTCAA+TGG - chr3_4:46794982-46795001 Msa0503530:intron 30.0%
!!! TCCCTTATTGTTAGTTTTGA+TGG + chr3_4:46795078-46795097 None:intergenic 30.0%
ACATACACAGGATTCTATAA+AGG + chr3_4:46795203-46795222 None:intergenic 30.0%
! TTTTACACATACACATACAC+AGG + chr3_4:46795215-46795234 None:intergenic 30.0%
TTAGTAACTAGCATTTCTTG+TGG + chr3_4:46795306-46795325 None:intergenic 30.0%
TTAGTGATTAGCATTTCTTG+TGG + chr3_4:46795390-46795409 None:intergenic 30.0%
AGTACCATAGTAGTTAATAG+CGG - chr3_4:46795427-46795446 Msa0503530:intron 30.0%
!! ACCGCTATTTCATAACTTTT+TGG - chr3_4:46795510-46795529 Msa0503530:intron 30.0%
AACCACCTAAATCTTATGAA+AGG - chr3_4:46795641-46795660 Msa0503530:intron 30.0%
AACCTTTCATAAGATTTAGG+TGG + chr3_4:46795646-46795665 None:intergenic 30.0%
!! CGTAATGTTTTGAATTTTGG+TGG + chr3_4:46795696-46795715 None:intergenic 30.0%
!! AGATGCTTTTTAGATCTGAA+AGG - chr3_4:46795751-46795770 Msa0503530:CDS 30.0%
CTTCCTTCTTTCATTCATTA+CGG + chr3_4:46795779-46795798 None:intergenic 30.0%
AGAGAGAAACTGAAGTTATT+AGG - chr3_4:46795797-46795816 Msa0503530:CDS 30.0%
GAGAGAAACTGAAGTTATTA+GGG - chr3_4:46795798-46795817 Msa0503530:CDS 30.0%
TGAAAATACAAGATTCTCCT+TGG + chr3_4:46795867-46795886 None:intergenic 30.0%
! GTCTATTTCTCGTCAAAATT+TGG + chr3_4:46796067-46796086 None:intergenic 30.0%
CATGGAGGAATTTAACAATA+AGG + chr3_4:46796211-46796230 None:intergenic 30.0%
TTAAATTCCTCCATGAACAT+CGG - chr3_4:46796216-46796235 Msa0503530:CDS 30.0%
AATAAGCATGACAACACTAA+AGG + chr3_4:46796275-46796294 None:intergenic 30.0%
AATGAATAATTCATAGGTCG+GGG + chr3_4:46796352-46796371 None:intergenic 30.0%
! TTGTTGGTTGAAATTTGGTT+TGG - chr3_4:46796432-46796451 Msa0503530:CDS 30.0%
AAGGATTTGCAAAATGAGTT+CGG - chr3_4:46796789-46796808 Msa0503530:CDS 30.0%
TTGGATTCTTTCAGATTTCA+TGG - chr3_4:46796964-46796983 Msa0503530:CDS 30.0%
! TTGGCATTTTATTAGAGAAG+AGG - chr3_4:46797027-46797046 Msa0503530:CDS 30.0%
! GTAATGGAGATGAAACTAAA+AGG - chr3_4:46797049-46797068 Msa0503530:CDS 30.0%
TATTGAACACAATTGTTGAC+TGG + chr3_4:46797348-46797367 None:intergenic 30.0%
TGTGTTCATATTATCCAACT+TGG - chr3_4:46797396-46797415 Msa0503530:five_prime_UTR 30.0%
CATGAAAGGATGGAGAATAA+GGG + chr3_4:46789096-46789115 None:intergenic 35.0%
! AACCCATTTTCTATTCCATC+AGG - chr3_4:46789257-46789276 Msa0503530:three_prime_UTR 35.0%
CACCTGATGGAATAGAAAAT+GGG + chr3_4:46789262-46789281 None:intergenic 35.0%
ACACCTGATGGAATAGAAAA+TGG + chr3_4:46789263-46789282 None:intergenic 35.0%
TCAACACTGAATCAAATTCG+CGG - chr3_4:46789298-46789317 Msa0503530:three_prime_UTR 35.0%
! AATTTTTCACCTTCTTGAGG+CGG + chr3_4:46789466-46789485 None:intergenic 35.0%
ATGAACGGTTACTTACATCT+AGG - chr3_4:46789511-46789530 Msa0503530:intron 35.0%
CCAGTACAATGAAAAGCAAA+AGG + chr3_4:46789610-46789629 None:intergenic 35.0%
!! CCTTTTGCTTTTCATTGTAC+TGG - chr3_4:46789607-46789626 Msa0503530:intron 35.0%
! TTGTACTGGTATGCCTATTA+AGG - chr3_4:46789621-46789640 Msa0503530:intron 35.0%
TTATCAGCAGAAGCCTTAAT+AGG + chr3_4:46789637-46789656 None:intergenic 35.0%
TCAATTTCCTCAGGAAAAAC+CGG + chr3_4:46789694-46789713 None:intergenic 35.0%
TCTAATTCCTCAATTTCCTC+AGG + chr3_4:46789703-46789722 None:intergenic 35.0%
GAAAATGAAAATGCTGTTGC+TGG - chr3_4:46789769-46789788 Msa0503530:intron 35.0%
CTGTTGCTGGGAAATTTAAA+GGG - chr3_4:46789782-46789801 Msa0503530:intron 35.0%
AGTTTCAGGATCCTTATAAG+TGG - chr3_4:46789896-46789915 Msa0503530:intron 35.0%
TTAAGATCATCAACAGCCAA+CGG + chr3_4:46789937-46789956 None:intergenic 35.0%
!!! GTTGATGATCTTAAGGCTTT+TGG - chr3_4:46789943-46789962 Msa0503530:intron 35.0%
!!! ACTGTTTTTTCGCCATTAGA+TGG - chr3_4:46790090-46790109 Msa0503530:intron 35.0%
!!! CTGTTTTTTCGCCATTAGAT+GGG - chr3_4:46790091-46790110 Msa0503530:intron 35.0%
TACGATTATTAAGATGGAGG+TGG - chr3_4:46790170-46790189 Msa0503530:intron 35.0%
ACCTTAAACTTCTCAGGAAA+AGG + chr3_4:46790201-46790220 None:intergenic 35.0%
!! TCCTGAGAAGTTTAAGGTTT+TGG - chr3_4:46790203-46790222 Msa0503530:intron 35.0%
TCCAAAACCTTAAACTTCTC+AGG + chr3_4:46790207-46790226 None:intergenic 35.0%
!! TGAGAAGTTTAAGGTTTTGG+AGG - chr3_4:46790206-46790225 Msa0503530:intron 35.0%
!!! GAGAAGTTTAAGGTTTTGGA+GGG - chr3_4:46790207-46790226 Msa0503530:intron 35.0%
! AAAGAAGGTTTTTCTTGCTG+CGG - chr3_4:46790230-46790249 Msa0503530:intron 35.0%
TTGCTTACCAAAATCACTCT+AGG - chr3_4:46790379-46790398 Msa0503530:three_prime_UTR 35.0%
TGCTTACCAAAATCACTCTA+GGG - chr3_4:46790380-46790399 Msa0503530:three_prime_UTR 35.0%
ATGATAGGCAAAACCTCAAA+CGG + chr3_4:46790654-46790673 None:intergenic 35.0%
!! GAGATTTGATTTTCATCTCC+AGG + chr3_4:46790719-46790738 None:intergenic 35.0%
TACTTGAAAGGTTTCACTGA+CGG - chr3_4:46790780-46790799 Msa0503530:intron 35.0%
! AAAAGCTTGCTCCTAATCAA+TGG + chr3_4:46790855-46790874 None:intergenic 35.0%
! ATTGATTAGGAGCAAGCTTT+TGG - chr3_4:46790854-46790873 Msa0503530:intron 35.0%
TTAATTAACTAGCCCCAAGT+TGG + chr3_4:46790977-46790996 None:intergenic 35.0%
ACATCATTGAAGAACTGCTT+GGG + chr3_4:46791743-46791762 None:intergenic 35.0%
TACATCATTGAAGAACTGCT+TGG + chr3_4:46791744-46791763 None:intergenic 35.0%
ACCAAAGATATACTACTACC+TGG - chr3_4:46791923-46791942 Msa0503530:CDS 35.0%
ACCAGGTAGTAGTATATCTT+TGG + chr3_4:46791927-46791946 None:intergenic 35.0%
AAAGATATACTACTACCTGG+TGG - chr3_4:46791926-46791945 Msa0503530:CDS 35.0%
TGCCAAATACAAAAACAACG+TGG + chr3_4:46792021-46792040 None:intergenic 35.0%
TTAATGCAAGTTTGAGCATG+TGG + chr3_4:46792310-46792329 None:intergenic 35.0%
GATCAGTGGTACATTACATA+TGG - chr3_4:46793082-46793101 Msa0503530:CDS 35.0%
TCAGTGGTACATTACATATG+GGG - chr3_4:46793084-46793103 Msa0503530:CDS 35.0%
!!! ACATGGTTTTGAGCATACTT+TGG - chr3_4:46793174-46793193 Msa0503530:CDS 35.0%
!!! CATGGTTTTGAGCATACTTT+GGG - chr3_4:46793175-46793194 Msa0503530:CDS 35.0%
TTGCAGAACAATGACATGTA+TGG - chr3_4:46793328-46793347 Msa0503530:CDS 35.0%
AGGTTTGATAGATGATTCAC+TGG + chr3_4:46793356-46793375 None:intergenic 35.0%
!! GTCTGGGATTATATTTTCTG+TGG - chr3_4:46793394-46793413 Msa0503530:CDS 35.0%
! TGGGATTATATTTTCTGTGG+TGG - chr3_4:46793397-46793416 Msa0503530:CDS 35.0%
! GATGAAATATCAGTGGACTT+AGG + chr3_4:46793430-46793449 None:intergenic 35.0%
AACGGATGATGAAATATCAG+TGG + chr3_4:46793437-46793456 None:intergenic 35.0%
! GGCAAAAGGTAAGATGATTT+TGG + chr3_4:46793531-46793550 None:intergenic 35.0%
AAATTGCAGTGTGGTTGTAA+AGG + chr3_4:46793552-46793571 None:intergenic 35.0%
TCTCAGAATTGAGCATTAAG+TGG + chr3_4:46793615-46793634 None:intergenic 35.0%
! TCTGAAATTTCCAGTAGACT+TGG + chr3_4:46793644-46793663 None:intergenic 35.0%
TGCTGTCTCAAACACAAAAT+TGG + chr3_4:46793749-46793768 None:intergenic 35.0%
TTCAAACCATGTAAGCTCTT+TGG + chr3_4:46793794-46793813 None:intergenic 35.0%
GACGGCAATGTTAATTTCAT+TGG + chr3_4:46793884-46793903 None:intergenic 35.0%
GATCATAAAAGCCAGTCTTT+AGG + chr3_4:46793951-46793970 None:intergenic 35.0%
TTTATGATCTTCAGTCTGCT+AGG - chr3_4:46793962-46793981 Msa0503530:intron 35.0%
TTATGATCTTCAGTCTGCTA+GGG - chr3_4:46793963-46793982 Msa0503530:intron 35.0%
GATGAGTATAGATTGTCATG+TGG - chr3_4:46793985-46794004 Msa0503530:intron 35.0%
TGAGTATAGATTGTCATGTG+GGG - chr3_4:46793987-46794006 Msa0503530:intron 35.0%
!! TGATTTGATGCGTCGTTTTA+TGG - chr3_4:46794026-46794045 Msa0503530:intron 35.0%
CATGTGAACTTGATTTCTGT+TGG + chr3_4:46794294-46794313 None:intergenic 35.0%
AGAAATCAAGTTCACATGCT+TGG - chr3_4:46794296-46794315 Msa0503530:intron 35.0%
TGAATGAACAATTTGACGGT+TGG - chr3_4:46794325-46794344 Msa0503530:intron 35.0%
AATCTTCGTTAAAGCTGTTC+TGG + chr3_4:46794374-46794393 None:intergenic 35.0%
TCCTTCTTATGCCTTAAGAA+AGG + chr3_4:46794495-46794514 None:intergenic 35.0%
AAATGGCAGTCTCAAATTCA+GGG + chr3_4:46794544-46794563 None:intergenic 35.0%
AGAACCTCAATTTCACCAAA+TGG + chr3_4:46794561-46794580 None:intergenic 35.0%
AACTTACCCAGTATCTACAT+GGG + chr3_4:46794747-46794766 None:intergenic 35.0%
AAACTTACCCAGTATCTACA+TGG + chr3_4:46794748-46794767 None:intergenic 35.0%
!! TCAATGGACTTGTTATCTGA+AGG - chr3_4:46794998-46795017 Msa0503530:intron 35.0%
TATAAAGGAATACAGAGTGC+GGG + chr3_4:46795188-46795207 None:intergenic 35.0%
CTATAAAGGAATACAGAGTG+CGG + chr3_4:46795189-46795208 None:intergenic 35.0%
CAGTACTAGTAGTACTTCAA+TGG - chr3_4:46795237-46795256 Msa0503530:intron 35.0%
CTATCCGCTATTAACTACTA+TGG + chr3_4:46795434-46795453 None:intergenic 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG - chr3_4:46795434-46795453 Msa0503530:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG + chr3_4:46795475-46795494 None:intergenic 35.0%
CTAGTCAGAGTAGTTAATAG+CGG + chr3_4:46796031-46796050 None:intergenic 35.0%
TAAATTCCTCCATGAACATC+GGG - chr3_4:46796217-46796236 Msa0503530:CDS 35.0%
ATGAATAATTCATAGGTCGG+GGG + chr3_4:46796351-46796370 None:intergenic 35.0%
GCACATGAAGTCTAGATTTA+TGG - chr3_4:46796470-46796489 Msa0503530:CDS 35.0%
! ATCCTTTAGAGACAAAACTG+AGG - chr3_4:46796597-46796616 Msa0503530:CDS 35.0%
! TCCTTTAGAGACAAAACTGA+GGG - chr3_4:46796598-46796617 Msa0503530:CDS 35.0%
ATCCATAAACTGAAAAGCAG+AGG - chr3_4:46796671-46796690 Msa0503530:CDS 35.0%
TTGACAAAACAAACAGGTCA+TGG - chr3_4:46796719-46796738 Msa0503530:CDS 35.0%
CAAACAGGTCATGGTTTATA+AGG - chr3_4:46796728-46796747 Msa0503530:CDS 35.0%
TGAATATGCAATGTATGTGC+AGG + chr3_4:46796759-46796778 None:intergenic 35.0%
GCATATTCAAGTCAAGATGA+AGG - chr3_4:46796770-46796789 Msa0503530:CDS 35.0%
CATGCAAAACAGATTTCACT+CGG + chr3_4:46796927-46796946 None:intergenic 35.0%
!!! TGGTGAGTTGGTTTTATGTT+TGG - chr3_4:46796945-46796964 Msa0503530:CDS 35.0%
! AAAAGGCGTAAGTGAAGTTT+AGG - chr3_4:46797066-46797085 Msa0503530:CDS 35.0%
!!! TAGGCATGTTTTAATGCATC+TGG - chr3_4:46797085-46797104 Msa0503530:CDS 35.0%
!!! CATGTTTTAATGCATCTGGT+TGG - chr3_4:46797089-46797108 Msa0503530:CDS 35.0%
GCATGAAAGGATGGAGAATA+AGG + chr3_4:46789097-46789116 None:intergenic 40.0%
TATAACAAGTAGCGGCGAAA+TGG - chr3_4:46789327-46789346 Msa0503530:three_prime_UTR 40.0%
CAAGTCTTCAAATCTGAACC+CGG - chr3_4:46789433-46789452 Msa0503530:intron 40.0%
GCTAGAGAGATTCAACAGTT+TGG - chr3_4:46789661-46789680 Msa0503530:intron 40.0%
! TCAACAGTTTGGTAATCCTC+CGG - chr3_4:46789672-46789691 Msa0503530:intron 40.0%
! GGTTTTTCCTGAGGAAATTG+AGG - chr3_4:46789693-46789712 Msa0503530:intron 40.0%
GATAAGGATAAGAATGCTGC+TGG - chr3_4:46789739-46789758 Msa0503530:intron 40.0%
GCTGTTGCTGGGAAATTTAA+AGG - chr3_4:46789781-46789800 Msa0503530:intron 40.0%
ATCGAAAGTTGCTGCGAAAT+CGG - chr3_4:46789810-46789829 Msa0503530:intron 40.0%
!! GTTGGCTGTTGATGATCTTA+AGG - chr3_4:46789936-46789955 Msa0503530:intron 40.0%
!!! GATCTTAAGGCTTTTGGGTT+TGG - chr3_4:46789949-46789968 Msa0503530:intron 40.0%
!!! CTTTTGGGTTTGGTTGTGAT+TGG - chr3_4:46789959-46789978 Msa0503530:intron 40.0%
! CTTTTGTTAGGTGGCATATG+AGG - chr3_4:46790025-46790044 Msa0503530:intron 40.0%
AACATCCTTCACAACCTTAC+CGG + chr3_4:46790064-46790083 None:intergenic 40.0%
GTAAGGTTGTGAAGGATGTT+AGG - chr3_4:46790064-46790083 Msa0503530:intron 40.0%
! GCCTTTTCCTGAGAAGTTTA+AGG - chr3_4:46790197-46790216 Msa0503530:intron 40.0%
!!! TAAGGTTTTGGAGGGAAAGA+AGG - chr3_4:46790215-46790234 Msa0503530:intron 40.0%
TGTACGGTCAAACAAATGCT+TGG - chr3_4:46790274-46790293 Msa0503530:intron 40.0%
GTACGGTCAAACAAATGCTT+GGG - chr3_4:46790275-46790294 Msa0503530:intron 40.0%
TGTTGCCTGATGGGAAATAT+GGG - chr3_4:46790298-46790317 Msa0503530:intron 40.0%
GTAAGCTCAAGCAAACAAGT+CGG + chr3_4:46790417-46790436 None:intergenic 40.0%
! GACTTGTTTGCTTGAGCTTA+CGG - chr3_4:46790416-46790435 Msa0503530:three_prime_UTR 40.0%
ACTTGTTTGCTTGAGCTTAC+GGG - chr3_4:46790417-46790436 Msa0503530:three_prime_UTR 40.0%
AAGGAAAGAGGAGATTTCAC+AGG + chr3_4:46790462-46790481 None:intergenic 40.0%
!! AGTTTGGTGTCAAGGATGAA+TGG - chr3_4:46790622-46790641 Msa0503530:intron 40.0%
!! GTTTGGTGTCAAGGATGAAT+GGG - chr3_4:46790623-46790642 Msa0503530:intron 40.0%
! AATGGCGGAACTTCAATGAT+AGG + chr3_4:46790669-46790688 None:intergenic 40.0%
ATCATTGAAGTTCCGCCATT+TGG - chr3_4:46790669-46790688 Msa0503530:intron 40.0%
! AGGAAGCTAAGCCATTGATT+AGG - chr3_4:46790841-46790860 Msa0503530:intron 40.0%
TGAATAATTTGGTCAGGCGT+TGG + chr3_4:46791510-46791529 None:intergenic 40.0%
CATCATTGAAGAACTGCTTG+GGG + chr3_4:46791742-46791761 None:intergenic 40.0%
TCACAACAACTATTCCACCA+AGG - chr3_4:46791797-46791816 Msa0503530:exon 40.0%
ATTGTAGATCTACAACCACC+AGG + chr3_4:46791944-46791963 None:intergenic 40.0%
CCATTGAGGCAAACAAATCA+TGG + chr3_4:46792205-46792224 None:intergenic 40.0%
!! CCATGATTTGTTTGCCTCAA+TGG - chr3_4:46792202-46792221 Msa0503530:CDS 40.0%
AGCTGTAATGAACAGGTTGT+GGG + chr3_4:46792774-46792793 None:intergenic 40.0%
TAGCTGTAATGAACAGGTTG+TGG + chr3_4:46792775-46792794 None:intergenic 40.0%
! AAGTTGACTCACGATATTGC+AGG + chr3_4:46792948-46792967 None:intergenic 40.0%
TTACATATGGGGAGTCAGAA+TGG - chr3_4:46793095-46793114 Msa0503530:CDS 40.0%
ATCGGATTCGACCATTTACA+TGG - chr3_4:46793282-46793301 Msa0503530:CDS 40.0%
! ATATCAGTGGACTTAGGGAA+AGG + chr3_4:46793424-46793443 None:intergenic 40.0%
TGAAGCTTGAGTTTGAGTAC+TGG - chr3_4:46793467-46793486 Msa0503530:CDS 40.0%
ACTGGTATCCATTTGATCTC+CGG - chr3_4:46793485-46793504 Msa0503530:CDS 40.0%
AGTGTGGTTGTAAAGGCAAA+AGG + chr3_4:46793545-46793564 None:intergenic 40.0%
GAGAAAATGTCCAAGTCTAC+TGG - chr3_4:46793631-46793650 Msa0503530:intron 40.0%
AACTATTCGTCAGGCAATTG+AGG - chr3_4:46793663-46793682 Msa0503530:intron 40.0%
! TGTGTTTGAGACAGCAAATG+CGG - chr3_4:46793753-46793772 Msa0503530:intron 40.0%
TACATGGTTTGAAGAGACTC+TGG - chr3_4:46793801-46793820 Msa0503530:intron 40.0%
GCAGAATCTTCTATGAGAAC+AGG - chr3_4:46793826-46793845 Msa0503530:intron 40.0%
ACACGATCAGCATAGATAGA+CGG + chr3_4:46793856-46793875 None:intergenic 40.0%
!!! GAAGAATGGTTTTGTGGTGA+AGG - chr3_4:46794119-46794138 Msa0503530:intron 40.0%
TGTTGGCACTCTTTAGTGTA+AGG + chr3_4:46794173-46794192 None:intergenic 40.0%
GAGTGCCAACAAATATCTAC+AGG - chr3_4:46794182-46794201 Msa0503530:intron 40.0%
TTGCTTCAGAAGCAACTTTC+AGG - chr3_4:46794228-46794247 Msa0503530:intron 40.0%
CAACTTTCAGGCTCAAAGAA+AGG - chr3_4:46794240-46794259 Msa0503530:intron 40.0%
ATTTCTGTTGGCACTACAAC+AGG + chr3_4:46794282-46794301 None:intergenic 40.0%
!! AGCTGTTCTGGAGAATGTTA+AGG + chr3_4:46794362-46794381 None:intergenic 40.0%
! AGATTCTCGAACTTTTGCTC+CGG - chr3_4:46794389-46794408 Msa0503530:intron 40.0%
TGCTCCGGATTCAGAAATTA+TGG - chr3_4:46794404-46794423 Msa0503530:intron 40.0%
TCCGGATTCAGAAATTATGG+CGG - chr3_4:46794407-46794426 Msa0503530:intron 40.0%
GCTTTACAACAGAGTTCTGT+AGG - chr3_4:46794429-46794448 Msa0503530:intron 40.0%
GCCTTTCTTAAGGCATAAGA+AGG - chr3_4:46794491-46794510 Msa0503530:intron 40.0%
GCATAAGAAGGAAAAAGCGA+TGG - chr3_4:46794503-46794522 Msa0503530:intron 40.0%
AAGGAAAAAGCGATGGAACT+CGG - chr3_4:46794510-46794529 Msa0503530:intron 40.0%
CAAATGGCAGTCTCAAATTC+AGG + chr3_4:46794545-46794564 None:intergenic 40.0%
! CTGAATTTGAGACTGCCATT+TGG - chr3_4:46794543-46794562 Msa0503530:intron 40.0%
! ACTGCCATTTGGTGAAATTG+AGG - chr3_4:46794554-46794573 Msa0503530:intron 40.0%
TGGTGAAATTGAGGTTCTTC+AGG - chr3_4:46794563-46794582 Msa0503530:intron 40.0%
TGAGGTTCTTCAGGAAAACT+TGG - chr3_4:46794572-46794591 Msa0503530:intron 40.0%
GAGACAGATAGGTTCAAAAG+AGG - chr3_4:46794605-46794624 Msa0503530:intron 40.0%
ACAGATAGGTTCAAAAGAGG+TGG - chr3_4:46794608-46794627 Msa0503530:intron 40.0%
TTCAAAAGAGGTGGTAGATG+TGG - chr3_4:46794617-46794636 Msa0503530:intron 40.0%
TATCTACATGGGCAAGAAGA+CGG + chr3_4:46794736-46794755 None:intergenic 40.0%
TTCTTGCCCATGTAGATACT+GGG - chr3_4:46794738-46794757 Msa0503530:intron 40.0%
AGAGAACAATGATGAAGTGG+AGG + chr3_4:46795044-46795063 None:intergenic 40.0%
GTGAGAGAACAATGATGAAG+TGG + chr3_4:46795047-46795066 None:intergenic 40.0%
GGCACAGTTGATTGTGAATT+AGG + chr3_4:46796164-46796183 None:intergenic 40.0%
TTCACAATCAACTGTGCCAT+TGG - chr3_4:46795122-46795141 Msa0503530:intron 40.0%
TAACCATAACGTGTCTCCAA+TGG + chr3_4:46796143-46796162 None:intergenic 40.0%
ATAAAGGAATACAGAGTGCG+GGG + chr3_4:46795187-46795206 None:intergenic 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + chr3_4:46795474-46795493 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG + chr3_4:46795476-46795495 None:intergenic 40.0%
ACGAGAAATAGACACTACAC+AGG - chr3_4:46796074-46796093 Msa0503530:CDS 40.0%
TAACCATAACGTGTCTCCAA+TGG - chr3_4:46796143-46796162 Msa0503530:CDS 40.0%
TTCACAATCAACTGTGCCAT+TGG + chr3_4:46795122-46795141 None:intergenic 40.0%
TGGCACAGTTGATTGTGAAT+TGG - chr3_4:46796163-46796182 Msa0503530:CDS 40.0%
GGCACAGTTGATTGTGAATT+GGG - chr3_4:46796164-46796183 Msa0503530:CDS 40.0%
TTTGTGTTTCTCCAAGCTAG+TGG - chr3_4:46796528-46796547 Msa0503530:CDS 40.0%
TTCGTGAAAAACCACTAGCT+TGG + chr3_4:46796542-46796561 None:intergenic 40.0%
!! TCCCTCAGTTTTGTCTCTAA+AGG + chr3_4:46796602-46796621 None:intergenic 40.0%
! CGAGTGAAATCTGTTTTGCA+TGG - chr3_4:46796925-46796944 Msa0503530:CDS 40.0%
! ATCTGTTTTGCATGGTGAGT+TGG - chr3_4:46796933-46796952 Msa0503530:CDS 40.0%
GATAAAGATTGGAACTGCAG+CGG - chr3_4:46797157-46797176 Msa0503530:CDS 40.0%
ATAAAGATTGGAACTGCAGC+GGG - chr3_4:46797158-46797177 Msa0503530:CDS 40.0%
AACTTCAGCATGTTCTCACA+AGG + chr3_4:46797209-46797228 None:intergenic 40.0%
! GTTGTAGAGGCATGAAAGGA+TGG + chr3_4:46789106-46789125 None:intergenic 45.0%
! GAGTGTTGTAGAGGCATGAA+AGG + chr3_4:46789110-46789129 None:intergenic 45.0%
!! AGTGCTGTAGAGTGTTGTAG+AGG + chr3_4:46789119-46789138 None:intergenic 45.0%
ACCTTTGTGTGAGATGCGAT+GGG + chr3_4:46789179-46789198 None:intergenic 45.0%
TACCTTTGTGTGAGATGCGA+TGG + chr3_4:46789180-46789199 None:intergenic 45.0%
ACACTGAATCAAATTCGCGG+CGG - chr3_4:46789301-46789320 Msa0503530:three_prime_UTR 45.0%
!! TTCTTGAGGCGGTTTGTTAC+CGG + chr3_4:46789455-46789474 None:intergenic 45.0%
TTCGAAACTTGAATTCGCCG+CGG - chr3_4:46789549-46789568 Msa0503530:intron 45.0%
! TAATCCTCCGGTTTTTCCTG+AGG - chr3_4:46789684-46789703 Msa0503530:intron 45.0%
ATTTCCTCAGGAAAAACCGG+AGG + chr3_4:46789691-46789710 None:intergenic 45.0%
TCGAAAGTTGCTGCGAAATC+GGG - chr3_4:46789811-46789830 Msa0503530:intron 45.0%
! TGGGAGATTATGAGGAGTGT+TGG - chr3_4:46789850-46789869 Msa0503530:intron 45.0%
TGCTGAGATTTCGGAGTTTC+AGG - chr3_4:46789882-46789901 Msa0503530:intron 45.0%
!!! GTTGTCTTATTTTCCGCCGT+TGG - chr3_4:46789918-46789937 Msa0503530:intron 45.0%
! GGTTTGGTTGTGATTGGAGA+AGG - chr3_4:46789965-46789984 Msa0503530:intron 45.0%
GTGGCATATGAGGAAGTTGA+AGG - chr3_4:46790035-46790054 Msa0503530:intron 45.0%
TTGAGGCCTGAGACTATGTA+CGG - chr3_4:46790258-46790277 Msa0503530:intron 45.0%
GTTTGACCGTACATAGTCTC+AGG + chr3_4:46790267-46790286 None:intergenic 45.0%
GTGTTGCCTGATGGGAAATA+TGG - chr3_4:46790297-46790316 Msa0503530:intron 45.0%
GTTGCCTGATGGGAAATATG+GGG - chr3_4:46790299-46790318 Msa0503530:intron 45.0%
AAAGCCCCATATTTCCCATC+AGG + chr3_4:46790306-46790325 None:intergenic 45.0%
!! AGGTGTTTGTTGTAGCGCAT+AGG - chr3_4:46790343-46790362 Msa0503530:three_prime_UTR 45.0%
!! GGTGTTTGTTGTAGCGCATA+GGG - chr3_4:46790344-46790363 Msa0503530:three_prime_UTR 45.0%
!! GAGGTACCCTAGAGTGATTT+TGG + chr3_4:46790389-46790408 None:intergenic 45.0%
CTTACGGGTCAGGATTTGAT+CGG - chr3_4:46790432-46790451 Msa0503530:three_prime_UTR 45.0%
TTACGGGTCAGGATTTGATC+GGG - chr3_4:46790433-46790452 Msa0503530:three_prime_UTR 45.0%
TAGTCATCAGGAGAGTCACT+AGG + chr3_4:46790558-46790577 None:intergenic 45.0%
TGACTCTCCTGATGACTACA+TGG - chr3_4:46790560-46790579 Msa0503530:intron 45.0%
TCTGCGCACTTGTTTCCAAA+TGG + chr3_4:46790687-46790706 None:intergenic 45.0%
ACTGACGGAACCATGATTGT+CGG - chr3_4:46790795-46790814 Msa0503530:intron 45.0%
!! AGGAGCAAGCTTTTGGAAAC+AGG - chr3_4:46790861-46790880 Msa0503530:intron 45.0%
TTGATGCAATCGCCAAATCG+TGG - chr3_4:46791274-46791293 Msa0503530:intron 45.0%
CTTACATGTCCTCCACGATT+TGG + chr3_4:46791289-46791308 None:intergenic 45.0%
TGTCGTGAGCTATGAATCCA+TGG - chr3_4:46792134-46792153 Msa0503530:CDS 45.0%
CCATTGAGGCAAACAGATCA+TGG + chr3_4:46792436-46792455 None:intergenic 45.0%
CCATGATCTGTTTGCCTCAA+TGG - chr3_4:46792433-46792452 Msa0503530:CDS 45.0%
TGTAATGAACAGGTTGTGGG+AGG + chr3_4:46792771-46792790 None:intergenic 45.0%
AAGAGGGTGATGTCTAGATC+TGG - chr3_4:46793034-46793053 Msa0503530:CDS 45.0%
!! TTGTAGCTCTGACAGATCAG+TGG - chr3_4:46793068-46793087 Msa0503530:CDS 45.0%
GATACAGGCTCATGTTAGAC+AGG + chr3_4:46793141-46793160 None:intergenic 45.0%
TATCATGATGAGACGCGACA+TGG - chr3_4:46793157-46793176 Msa0503530:CDS 45.0%
!! GTTTTGAGCATACTTTGGGC+TGG - chr3_4:46793179-46793198 Msa0503530:CDS 45.0%
!! TTTGGGCTGGTTGAATCAGT+GGG - chr3_4:46793192-46793211 Msa0503530:CDS 45.0%
TGCTCACGTTCATTTGGTCT+TGG - chr3_4:46793217-46793236 Msa0503530:CDS 45.0%
TCTTGGCACACGTATACCAT+GGG - chr3_4:46793234-46793253 Msa0503530:CDS 45.0%
ACTAGGAACTGTTCATCCCA+TGG + chr3_4:46793253-46793272 None:intergenic 45.0%
GTTCCTAGTCGAGTCTCTAT+CGG - chr3_4:46793264-46793283 Msa0503530:CDS 45.0%
AATCCGATAGAGACTCGACT+AGG + chr3_4:46793270-46793289 None:intergenic 45.0%
ACATCATCAGTCAGTTGCTG+AGG + chr3_4:46793376-46793395 None:intergenic 45.0%
! AGCAACTGACTGATGATGTC+TGG - chr3_4:46793377-46793396 Msa0503530:CDS 45.0%
! GCAACTGACTGATGATGTCT+GGG - chr3_4:46793378-46793397 Msa0503530:CDS 45.0%
CTGGTATCCATTTGATCTCC+GGG - chr3_4:46793486-46793505 Msa0503530:CDS 45.0%
TGAGATCTTTACCAGACACC+CGG + chr3_4:46793507-46793526 None:intergenic 45.0%
! CAATTTTCCCCAAGCATCAC+TGG - chr3_4:46793566-46793585 Msa0503530:intron 45.0%
TGATGCTACACGCTTCTCTT+TGG - chr3_4:46793696-46793715 Msa0503530:intron 45.0%
GGCTTCTCGGAACATATAGT+TGG + chr3_4:46793929-46793948 None:intergenic 45.0%
!!! AATGGTTTTGTGGTGAAGGC+AGG - chr3_4:46794123-46794142 Msa0503530:intron 45.0%
GCACTCTTTAGTGTAAGGTC+AGG + chr3_4:46794168-46794187 None:intergenic 45.0%
! CTGGAGAATGTTAAGGCACT+CGG + chr3_4:46794355-46794374 None:intergenic 45.0%
GCCGCCATAATTTCTGAATC+CGG + chr3_4:46794411-46794430 None:intergenic 45.0%
AGGAAAAAGCGATGGAACTC+GGG - chr3_4:46794511-46794530 Msa0503530:intron 45.0%
GACTCGATCAAGAGACAGAT+AGG - chr3_4:46794594-46794613 Msa0503530:intron 45.0%
!! TGCAGCTGATGCTGATTCTT+TGG - chr3_4:46794650-46794669 Msa0503530:intron 45.0%
AGATGCATGAGATCCAGCTT+TGG + chr3_4:46794676-46794695 None:intergenic 45.0%
CTTCTTGCCCATGTAGATAC+TGG - chr3_4:46794737-46794756 Msa0503530:intron 45.0%
! GAAGGAGCAACTTGTTTGAC+AGG - chr3_4:46795016-46795035 Msa0503530:intron 45.0%
TAAAGGAATACAGAGTGCGG+GGG + chr3_4:46795186-46795205 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG + chr3_4:46795470-46795489 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG - chr3_4:46795468-46795487 Msa0503530:intron 45.0%
GACCCCAAAAATGCTATAGC+GGG - chr3_4:46795469-46795488 Msa0503530:intron 45.0%
GCGCCGTAATGAATGAAAGA+AGG - chr3_4:46795773-46795792 Msa0503530:CDS 45.0%
AAAACCGCTATGCAGTGTTG+CGG - chr3_4:46795916-46795935 Msa0503530:CDS 45.0%
TATCTCATAACGCTACGCCA+TGG - chr3_4:46795954-46795973 Msa0503530:CDS 45.0%
AGTTAATAGCGGCGCTATAG+CGG + chr3_4:46796020-46796039 None:intergenic 45.0%
TAGACACTACACAGGTACAC+AGG - chr3_4:46796082-46796101 Msa0503530:CDS 45.0%
CTTAACTCACCCGATGTTCA+TGG + chr3_4:46796229-46796248 None:intergenic 45.0%
AATAATTCATAGGTCGGGGG+AGG + chr3_4:46796348-46796367 None:intergenic 45.0%
AGAGACAAAACTGAGGGATG+AGG - chr3_4:46796604-46796623 Msa0503530:CDS 45.0%
!! GGCCTCTGCTTTTCAGTTTA+TGG + chr3_4:46796676-46796695 None:intergenic 45.0%
TACAAAAGGGGGTGAGCTTT+AGG + chr3_4:46796697-46796716 None:intergenic 45.0%
!!! CTGGTTGGTTGTCATTTTGC+AGG - chr3_4:46797104-46797123 Msa0503530:CDS 45.0%
!! ATAAATAAAATTTGATAAAA+AGG + chr3_4:46794832-46794851 None:intergenic 5.0%
!!! ATGATAATTTTTTTTTTTTT+TGG + chr3_4:46795361-46795380 None:intergenic 5.0%
! TGTGAGATGCGATGGGGTTT+TGG + chr3_4:46789172-46789191 None:intergenic 50.0%
CCTTTGTGTGAGATGCGATG+GGG + chr3_4:46789178-46789197 None:intergenic 50.0%
!! TCTTGAGGCGGTTTGTTACC+GGG + chr3_4:46789454-46789473 None:intergenic 50.0%
GGTAACAAACCGCCTCAAGA+AGG - chr3_4:46789454-46789473 Msa0503530:intron 50.0%
AAAGTTGCTGCGAAATCGGG+TGG - chr3_4:46789814-46789833 Msa0503530:intron 50.0%
AAGTTGCTGCGAAATCGGGT+GGG - chr3_4:46789815-46789834 Msa0503530:intron 50.0%
GGGTGGGCAGGTTTATCAAT+GGG - chr3_4:46789831-46789850 Msa0503530:intron 50.0%
AGATCATCAACAGCCAACGG+CGG + chr3_4:46789934-46789953 None:intergenic 50.0%
!! ATGAGGAAGTTGAAGGCGTC+CGG - chr3_4:46790042-46790061 Msa0503530:intron 50.0%
! ATTAGATGGGCAGCCTTGTG+CGG - chr3_4:46790104-46790123 Msa0503530:intron 50.0%
! AGCCTTGTGCGGATCATGAT+AGG - chr3_4:46790115-46790134 Msa0503530:intron 50.0%
GCCTTGTGCGGATCATGATA+GGG - chr3_4:46790116-46790135 Msa0503530:intron 50.0%
! CATGATAGGGCTAGTGGTGA+AGG - chr3_4:46790129-46790148 Msa0503530:intron 50.0%
! AATGCTTGGGTGTTGCCTGA+TGG - chr3_4:46790288-46790307 Msa0503530:intron 50.0%
! ATGCTTGGGTGTTGCCTGAT+GGG - chr3_4:46790289-46790308 Msa0503530:intron 50.0%
!! GTTTGTTGTAGCGCATAGGG+CGG - chr3_4:46790347-46790366 Msa0503530:three_prime_UTR 50.0%
AGCAAACAAGTCGGTCTCTG+AGG + chr3_4:46790408-46790427 None:intergenic 50.0%
TTTGCTTGAGCTTACGGGTC+AGG - chr3_4:46790422-46790441 Msa0503530:three_prime_UTR 50.0%
!! GATGGATAAAGGTACCGGAG+TGG - chr3_4:46790521-46790540 Msa0503530:intron 50.0%
TGCAACGCCATGTAGTCATC+AGG + chr3_4:46790570-46790589 None:intergenic 50.0%
TGATGACTACATGGCGTTGC+AGG - chr3_4:46790569-46790588 Msa0503530:intron 50.0%
! GCAGGATCTGAAGTCCAAAG+CGG - chr3_4:46790587-46790606 Msa0503530:intron 50.0%
TGAAGTCCAAAGCGGCGTTT+AGG - chr3_4:46790595-46790614 Msa0503530:intron 50.0%
GAAGTCCAAAGCGGCGTTTA+GGG - chr3_4:46790596-46790615 Msa0503530:intron 50.0%
!! TAGGGCGAAGTTTGGTGTCA+AGG - chr3_4:46790614-46790633 Msa0503530:intron 50.0%
! TGAATGGGTGTTGCCGTTTG+AGG - chr3_4:46790638-46790657 Msa0503530:intron 50.0%
GCGCACTTGTTTCCAAATGG+CGG + chr3_4:46790684-46790703 None:intergenic 50.0%
TGGAAACAAGTGCGCAGAGA+CGG - chr3_4:46790689-46790708 Msa0503530:intron 50.0%
ATGCAATCGCCAAATCGTGG+AGG - chr3_4:46791277-46791296 Msa0503530:intron 50.0%
TTGTTGTGAGCAGCATGTCC+AGG + chr3_4:46791786-46791805 None:intergenic 50.0%
GAGGCAAACAGATCATGGAC+AGG + chr3_4:46792431-46792450 None:intergenic 50.0%
TGTACAGTGAGCCAGAGAAG+AGG - chr3_4:46793017-46793036 Msa0503530:CDS 50.0%
GTACAGTGAGCCAGAGAAGA+GGG - chr3_4:46793018-46793037 Msa0503530:CDS 50.0%
CTAGACATCACCCTCTTCTC+TGG + chr3_4:46793031-46793050 None:intergenic 50.0%
GTCGCGTCTCATCATGATAC+AGG + chr3_4:46793156-46793175 None:intergenic 50.0%
!! CTTTGGGCTGGTTGAATCAG+TGG - chr3_4:46793191-46793210 Msa0503530:CDS 50.0%
! TGGGCTTGCTCACGTTCATT+TGG - chr3_4:46793211-46793230 Msa0503530:CDS 50.0%
GTCTTGGCACACGTATACCA+TGG - chr3_4:46793233-46793252 Msa0503530:CDS 50.0%
GCTTGGGGAAAATTGCAGTG+TGG + chr3_4:46793561-46793580 None:intergenic 50.0%
CCATTGCATCTAAACCCACG+AGG + chr3_4:46793592-46793611 None:intergenic 50.0%
CCTCGTGGGTTTAGATGCAA+TGG - chr3_4:46793589-46793608 Msa0503530:intron 50.0%
TCTTTGGCTGATGCTGGTGA+TGG - chr3_4:46793712-46793731 Msa0503530:intron 50.0%
CAGCAAATGCGGCAATTCTG+AGG - chr3_4:46793764-46793783 Msa0503530:intron 50.0%
GGCTCACCAAAGAGCTTACA+TGG - chr3_4:46793785-46793804 Msa0503530:intron 50.0%
CGATCAGCATAGATAGACGG+TGG + chr3_4:46793853-46793872 None:intergenic 50.0%
TTCCGAGAAGCCCTAAAGAC+TGG - chr3_4:46793937-46793956 Msa0503530:intron 50.0%
!! AGCCAGTCTTTAGGGCTTCT+CGG + chr3_4:46793942-46793961 None:intergenic 50.0%
AGATTGTCATGTGGGGCTAG+TGG - chr3_4:46793994-46794013 Msa0503530:intron 50.0%
! GTTTTGTGGTGAAGGCAGGT+TGG - chr3_4:46794127-46794146 Msa0503530:intron 50.0%
GGAAAAAGCGATGGAACTCG+GGG - chr3_4:46794512-46794531 Msa0503530:intron 50.0%
! GCTGATTCTTTGGCCAAAGC+TGG - chr3_4:46794660-46794679 Msa0503530:intron 50.0%
! GTGCCATTGGAGACACGTTA+TGG - chr3_4:46795135-46795154 Msa0503530:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG + chr3_4:46795501-46795520 None:intergenic 50.0%
! ATGAGATAGCGGCGCAATAG+CGG + chr3_4:46795942-46795961 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG + chr3_4:46795953-46795972 None:intergenic 50.0%
CGCCATGGCTTATTGCATAG+CGG - chr3_4:46795969-46795988 Msa0503530:CDS 50.0%
GACCGCTATGCAATAAGCCA+TGG + chr3_4:46795974-46795993 None:intergenic 50.0%
TGGCTTATTGCATAGCGGTC+CGG - chr3_4:46795974-46795993 Msa0503530:CDS 50.0%
AGGTACACAGGTACAGAGTG+CGG - chr3_4:46796094-46796113 Msa0503530:CDS 50.0%
! GTGCCATTGGAGACACGTTA+TGG + chr3_4:46795135-46795154 None:intergenic 50.0%
AACTCACCCGATGTTCATGG+AGG + chr3_4:46796226-46796245 None:intergenic 50.0%
CAAAACTGAGGGATGAGGCA+AGG - chr3_4:46796609-46796628 Msa0503530:CDS 50.0%
GGGATGAGGCAAGGAAATGA+TGG - chr3_4:46796618-46796637 Msa0503530:CDS 50.0%
GCGGGCAAGTTTGTCTTTCT+TGG - chr3_4:46797176-46797195 Msa0503530:CDS 50.0%
CCCCATCGCATCTCACACAA+AGG - chr3_4:46789175-46789194 Msa0503530:three_prime_UTR 55.0%
CTGAATCAAATTCGCGGCGG+CGG - chr3_4:46789304-46789323 Msa0503530:three_prime_UTR 55.0%
GGCGGCGGTATAACAAGTAG+CGG - chr3_4:46789319-46789338 Msa0503530:three_prime_UTR 55.0%
AAGTAGCGGCGAAATGGCGT+CGG - chr3_4:46789333-46789352 Msa0503530:three_prime_UTR 55.0%
ACGAAGACGATGAAACGCCG+CGG + chr3_4:46789569-46789588 None:intergenic 55.0%
CGGGTGGGCAGGTTTATCAA+TGG - chr3_4:46789830-46789849 Msa0503530:intron 55.0%
!! GAAGTTGAAGGCGTCCGGTA+AGG - chr3_4:46790047-46790066 Msa0503530:intron 55.0%
GCACAAGGCTGCCCATCTAA+TGG + chr3_4:46790105-46790124 None:intergenic 55.0%
GCCCTATCATGATCCGCACA+AGG + chr3_4:46790120-46790139 None:intergenic 55.0%
GCGGATCATGATAGGGCTAG+TGG - chr3_4:46790123-46790142 Msa0503530:intron 55.0%
AGGAGAGTCACTAGGCACAC+TGG + chr3_4:46790550-46790569 None:intergenic 55.0%
CCAGACACCCGGAGATCAAA+TGG + chr3_4:46793496-46793515 None:intergenic 55.0%
CCATTTGATCTCCGGGTGTC+TGG - chr3_4:46793493-46793512 Msa0503530:CDS 55.0%
CGCTTCTCTTTGGCTGATGC+TGG - chr3_4:46793706-46793725 Msa0503530:intron 55.0%
AGAGACAATCCTCCATCCCC+TGG - chr3_4:46794699-46794718 Msa0503530:intron 55.0%
AGACGGCAGTAGGACTTCCA+GGG + chr3_4:46794719-46794738 None:intergenic 55.0%
AAGACGGCAGTAGGACTTCC+AGG + chr3_4:46794720-46794739 None:intergenic 55.0%
ATGGGCAAGAAGACGGCAGT+AGG + chr3_4:46794729-46794748 None:intergenic 55.0%
GGTACACAGGTACAGAGTGC+GGG - chr3_4:46796095-46796114 Msa0503530:CDS 55.0%
GTACACAGGTACAGAGTGCG+GGG - chr3_4:46796096-46796115 Msa0503530:CDS 55.0%
TACACAGGTACAGAGTGCGG+GGG - chr3_4:46796097-46796116 Msa0503530:CDS 55.0%
GCGGCGTTTCATCGTCTTCG+TGG - chr3_4:46789568-46789587 Msa0503530:intron 60.0%
GGCGTCCGGTAAGGTTGTGA+AGG - chr3_4:46790056-46790075 Msa0503530:intron 60.0%
TTCTTGCTGCGGCGACGTTG+AGG - chr3_4:46790241-46790260 Msa0503530:intron 60.0%
AGGCACACTGGTCACCACTC+CGG + chr3_4:46790538-46790557 None:intergenic 60.0%
CTTCGCCCTAAACGCCGCTT+TGG + chr3_4:46790604-46790623 None:intergenic 60.0%
! GCGGCGTTTAGGGCGAAGTT+TGG - chr3_4:46790606-46790625 Msa0503530:intron 60.0%
CACGAGGCCAGTGATGCTTG+GGG + chr3_4:46793576-46793595 None:intergenic 60.0%
CCACGAGGCCAGTGATGCTT+GGG + chr3_4:46793577-46793596 None:intergenic 60.0%
! CCAAGCATCACTGGCCTCGT+GGG - chr3_4:46793575-46793594 Msa0503530:intron 60.0%
! GAAGGCAGGTTGGCCAACAG+CGG - chr3_4:46794137-46794156 Msa0503530:intron 60.0%
!! AGGTCAGGAGCATCCGCTGT+TGG + chr3_4:46794153-46794172 None:intergenic 60.0%
GTAGGACTTCCAGGGGATGG+AGG + chr3_4:46794711-46794730 None:intergenic 60.0%
GCAGTAGGACTTCCAGGGGA+TGG + chr3_4:46794714-46794733 None:intergenic 60.0%
GACGGCAGTAGGACTTCCAG+GGG + chr3_4:46794718-46794737 None:intergenic 60.0%
ACACAGGTACAGAGTGCGGG+GGG - chr3_4:46796098-46796117 Msa0503530:CDS 60.0%
TGCTGCGAAATCGGGTGGGC+AGG - chr3_4:46789819-46789838 Msa0503530:intron 65.0%
GTGCGCAGAGACGGTTTGCC+TGG - chr3_4:46790698-46790717 Msa0503530:intron 65.0%
! CCCAAGCATCACTGGCCTCG+TGG - chr3_4:46793574-46793593 Msa0503530:intron 65.0%
CCCACGAGGCCAGTGATGCT+TGG + chr3_4:46793578-46793597 None:intergenic 65.0%
GCGGCCGCAACACTGCATAG+CGG + chr3_4:46795923-46795942 None:intergenic 65.0%
GTGCGGGGGCTGCAGTTGCA+TGG + chr3_4:46795172-46795191 None:intergenic 70.0%
TGCGGGGGGCTGCAGTTGCA+TGG - chr3_4:46796112-46796131 Msa0503530:CDS 70.0%
GCTATAGCGGCCGCGCGGTG+CGG + chr3_4:46796007-46796026 None:intergenic 75.0%
! CGCGCGGTGCGGTGCGGTAC+CGG + chr3_4:46795996-46796015 None:intergenic 80.0%
! CGGTACCGCACCGCACCGCG+CGG - chr3_4:46795994-46796013 Msa0503530:CDS 80.0%
! GCGGCGCTATAGCGGCCGCG+CGG + chr3_4:46796012-46796031 None:intergenic 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + chr3_4:46796002-46796021 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 46789086 46797467 46789086 ID=Msa0503530;Name=Msa0503530
chr3_4 mRNA 46789086 46797467 46789086 ID=Msa0503530-mRNA-1;Parent=Msa0503530;Name=Msa0503530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=73|1|1|1|0.5|0.4|5|492|1129
chr3_4 exon 46789086 46789427 46789086 ID=Msa0503530-mRNA-1:exon:10015;Parent=Msa0503530-mRNA-1
chr3_4 exon 46790315 46790457 46790315 ID=Msa0503530-mRNA-1:exon:10014;Parent=Msa0503530-mRNA-1
chr3_4 exon 46791794 46793548 46791794 ID=Msa0503530-mRNA-1:exon:10013;Parent=Msa0503530-mRNA-1
chr3_4 exon 46795671 46797274 46795671 ID=Msa0503530-mRNA-1:exon:10012;Parent=Msa0503530-mRNA-1
chr3_4 exon 46797357 46797467 46797357 ID=Msa0503530-mRNA-1:exon:10011;Parent=Msa0503530-mRNA-1
chr3_4 five_prime_UTR 46797395 46797467 46797395 ID=Msa0503530-mRNA-1:five_prime_utr;Parent=Msa0503530-mRNA-1
chr3_4 CDS 46797357 46797394 46797357 ID=Msa0503530-mRNA-1:cds;Parent=Msa0503530-mRNA-1
chr3_4 CDS 46795671 46797274 46795671 ID=Msa0503530-mRNA-1:cds;Parent=Msa0503530-mRNA-1
chr3_4 CDS 46791801 46793548 46791801 ID=Msa0503530-mRNA-1:cds;Parent=Msa0503530-mRNA-1
chr3_4 three_prime_UTR 46791794 46791800 46791794 ID=Msa0503530-mRNA-1:three_prime_utr;Parent=Msa0503530-mRNA-1
chr3_4 three_prime_UTR 46790315 46790457 46790315 ID=Msa0503530-mRNA-1:three_prime_utr;Parent=Msa0503530-mRNA-1
chr3_4 three_prime_UTR 46789086 46789427 46789086 ID=Msa0503530-mRNA-1:three_prime_utr;Parent=Msa0503530-mRNA-1
Gene Sequence

>Msa0503530

ATGTTCATTTCCAAAACCCCATCGCATCTCACACAAAGGTGTAAAAGATTTCTAGCTTCAACACTGAATCAAATTCGCGGCGGCGGTATAACAAGTAGCGGCGAAATGGCGTCGGAAACTTCACGAAGCTTCGTTCGTCGCGATCGTCTTCGCGAAATCGAATCAAAAGTTCAAAAATGGTGGGAAGAGAAACAAGTCTTCAAATCTGAACCCGGTAACAAACCGCCTCAAGAAGGTGAAAAATTCTTCGGAAATTTCCCTTTTCCTTATATGAACGGTTACTTACATCTAGGTCATGCTTTTTCGCTTTCGAAACTTGAATTCGCCGCGGCGTTTCATCGTCTTCGTGGCGCGAATGTTCTTTTGCCTTTTGCTTTTCATTGTACTGGTATGCCTATTAAGGCTTCTGCTGATAAGCTTGCTAGAGAGATTCAACAGTTTGGTAATCCTCCGGTTTTTCCTGAGGAAATTGAGGAATTAGAGAATTTAACTGTTGTTGATAAGGATAAGAATGCTGCTGGAAATGATGAAAATGAAAATGCTGTTGCTGGGAAATTTAAAGGGAAGAAATCGAAAGTTGCTGCGAAATCGGGTGGGCAGGTTTATCAATGGGAGATTATGAGGAGTGTTGGTATTTCTGATGCTGAGATTTCGGAGTTTCAGGATCCTTATAAGTGGTTGTCTTATTTTCCGCCGTTGGCTGTTGATGATCTTAAGGCTTTTGGGTTTGGTTGTGATTGGAGAAGGTCGTTCATTACGACAGATATGAATCCTTATTTTGATGCTTTTGTTAGGTGGCATATGAGGAAGTTGAAGGCGTCCGGTAAGGTTGTGAAGGATGTTAGGTATACTGTTTTTTCGCCATTAGATGGGCAGCCTTGTGCGGATCATGATAGGGCTAGTGGTGAAGGTGTTCAGCCGCAAGAGTATACGATTATTAAGATGGAGGTGGTTTCGCCTTTTCCTGAGAAGTTTAAGGTTTTGGAGGGAAAGAAGGTTTTTCTTGCTGCGGCGACGTTGAGGCCTGAGACTATGTACGGTCAAACAAATGCTTGGGTGTTGCCTGATGGGAAATATGGGGCTTTTGAGATTAATGAAACGGAGGTGTTTGTTGTAGCGCATAGGGCGGCGCTTAATCTTGCTTACCAAAATCACTCTAGGGTACCTCAGAGACCGACTTGTTTGCTTGAGCTTACGGGTCAGGATTTGATCGGGATTCCTGTGAAATCTCCTCTTTCCTTGAATGAGATTATATATGTGCTTCCTATGTTGTCTATTTTGATGGATAAAGGTACCGGAGTGGTGACCAGTGTGCCTAGTGACTCTCCTGATGACTACATGGCGTTGCAGGATCTGAAGTCCAAAGCGGCGTTTAGGGCGAAGTTTGGTGTCAAGGATGAATGGGTGTTGCCGTTTGAGGTTTTGCCTATCATTGAAGTTCCGCCATTTGGAAACAAGTGCGCAGAGACGGTTTGCCTGGAGATGAAAATCAAATCTCAGAATGAGAAAGACAAGCTTGCAGAAGCCAAGAAACAAACATACTTGAAAGGTTTCACTGACGGAACCATGATTGTCGGAGAATTTAAAGATAAGAAAGTTCAGGAAGCTAAGCCATTGATTAGGAGCAAGCTTTTGGAAACAGGTGAGGCAATTGTGTACAGTGAGCCAGAGAAGAGGGTGATGTCTAGATCTGGTGATGAATGTGTTGTAGCTCTGACAGATCAGTGGTACATTACATATGGGGAGTCAGAATGGAAGCAGTTAACTGATGAATGCCTGTCTAACATGAGCCTGTATCATGATGAGACGCGACATGGTTTTGAGCATACTTTGGGCTGGTTGAATCAGTGGGCTTGCTCACGTTCATTTGGTCTTGGCACACGTATACCATGGGATGAACAGTTCCTAGTCGAGTCTCTATCGGATTCGACCATTTACATGGCTTATTACACTATTGCGCACTATTTGCAGAACAATGACATGTATGGAACCAGTGAATCATCTATCAAACCTCAGCAACTGACTGATGATGTCTGGGATTATATTTTCTGTGGTGGACCTTTCCCTAAGTCCACTGATATTTCATCATCCGTTTTAGAAAAAATGAAGCTTGAGTTTGAGTACTGGTATCCATTTGATCTCCGGGTGTCTGGTAAAGATCTCATCCAAAATCATCTTACCTTTTGCCTTTACAACCACACTGCAATTTTCCCCAAGCATCACTGGCCTCGTGGGTTTAGATGCAATGGCCACTTAATGCTCAATTCTGAGAAAATGTCCAAGTCTACTGGAAATTTCAGAACTATTCGTCAGGCAATTGAGGAGTTTTCTGCTGATGCTACACGCTTCTCTTTGGCTGATGCTGGTGATGGTGTTGATGATGCCAATTTTGTGTTTGAGACAGCAAATGCGGCAATTCTGAGGCTCACCAAAGAGCTTACATGGTTTGAAGAGACTCTGGATGCAGAATCTTCTATGAGAACAGGTCCACCGTCTATCTATGCTGATCGTGTGTTTGCCAATGAAATTAACATTGCCGTCAAAACAACTGAGCAAAATTACTCCAACTATATGTTCCGAGAAGCCCTAAAGACTGGCTTTTATGATCTTCAGTCTGCTAGGGATGAGTATAGATTGTCATGTGGGGCTAGTGGTTTCAATCGTGATTTGATGCGTCGTTTTATGGATGTGCAGACACGTCTTCTAGCACCTATCTGTCCGCATTATGCAGAGTTTATTTGGAGAGAAATTTTGAAGAAGAATGGTTTTGTGGTGAAGGCAGGTTGGCCAACAGCGGATGCTCCTGACCTTACACTAAAGAGTGCCAACAAATATCTACAGGATTCTATTGTTCTGATAAGGAAGTTGCTTCAGAAGCAACTTTCAGGCTCAAAGAAAGGAAATAAGAAAGGCGCTCCTGTTGTAGTGCCAACAGAAATCAAGTTCACATGCTTGGTATATGTGAATGAACAATTTGACGGTTGGAAAGCCGAGTGCCTTAACATTCTCCAGAACAGCTTTAACGAAGATTCTCGAACTTTTGCTCCGGATTCAGAAATTATGGCGGCTTTACAACAGAGTTCTGTAGGTCAATCTTCTGATTTTAAACGAACTCAAAAGTTATGTATGCCTTTCTTAAGGCATAAGAAGGAAAAAGCGATGGAACTCGGGGCTCAAGCCCTGAATTTGAGACTGCCATTTGGTGAAATTGAGGTTCTTCAGGAAAACTTGGACTCGATCAAGAGACAGATAGGTTCAAAAGAGGTGGTAGATGTGGAAATTTTATCTGCAGCTGATGCTGATTCTTTGGCCAAAGCTGGATCTCATGCATCTCTAAGAGACAATCCTCCATCCCCTGGAAGTCCTACTGCCGTCTTCTTGCCCATGTAG
Protein sequence

>Msa0503530

MFISKTPSHLTQRCKRFLASTLNQIRGGGITSSGEMASETSRSFVRRDRLREIESKVQKWWEEKQVFKSEPGNKPPQEGEKFFGNFPFPYMNGYLHLGHAFSLSKLEFAAAFHRLRGANVLLPFAFHCTGMPIKASADKLAREIQQFGNPPVFPEEIEELENLTVVDKDKNAAGNDENENAVAGKFKGKKSKVAAKSGGQVYQWEIMRSVGISDAEISEFQDPYKWLSYFPPLAVDDLKAFGFGCDWRRSFITTDMNPYFDAFVRWHMRKLKASGKVVKDVRYTVFSPLDGQPCADHDRASGEGVQPQEYTIIKMEVVSPFPEKFKVLEGKKVFLAAATLRPETMYGQTNAWVLPDGKYGAFEINETEVFVVAHRAALNLAYQNHSRVPQRPTCLLELTGQDLIGIPVKSPLSLNEIIYVLPMLSILMDKGTGVVTSVPSDSPDDYMALQDLKSKAAFRAKFGVKDEWVLPFEVLPIIEVPPFGNKCAETVCLEMKIKSQNEKDKLAEAKKQTYLKGFTDGTMIVGEFKDKKVQEAKPLIRSKLLETGEAIVYSEPEKRVMSRSGDECVVALTDQWYITYGESEWKQLTDECLSNMSLYHDETRHGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVESLSDSTIYMAYYTIAHYLQNNDMYGTSESSIKPQQLTDDVWDYIFCGGPFPKSTDISSSVLEKMKLEFEYWYPFDLRVSGKDLIQNHLTFCLYNHTAIFPKHHWPRGFRCNGHLMLNSEKMSKSTGNFRTIRQAIEEFSADATRFSLADAGDGVDDANFVFETANAAILRLTKELTWFEETLDAESSMRTGPPSIYADRVFANEINIAVKTTEQNYSNYMFREALKTGFYDLQSARDEYRLSCGASGFNRDLMRRFMDVQTRLLAPICPHYAEFIWREILKKNGFVVKAGWPTADAPDLTLKSANKYLQDSIVLIRKLLQKQLSGSKKGNKKGAPVVVPTEIKFTCLVYVNEQFDGWKAECLNILQNSFNEDSRTFAPDSEIMAALQQSSVGQSSDFKRTQKLCMPFLRHKKEKAMELGAQALNLRLPFGEIEVLQENLDSIKRQIGSKEVVDVEILSAADADSLAKAGSHASLRDNPPSPGSPTAVFLPM*