Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128990 | XP_024627299.1 | 100.000 | 176 | 0 | 0 | 27 | 202 | 1 | 176 | 9.38e-130 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128990 | sp|Q86SZ2|TPC6B_HUMAN | 49.286 | 140 | 53 | 1 | 62 | 201 | 35 | 156 | 8.53e-43 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128990 | A2Q3F3 | 100.000 | 176 | 0 | 0 | 27 | 202 | 1 | 176 | 4.48e-130 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa1128990 | 0.800367 | 1.489910e-48 | -8.615850e-47 |
| Msa0020390 | Msa1128990 | 0.830561 | 2.739561e-55 | -8.615850e-47 |
| Msa0029260 | Msa1128990 | 0.815767 | 7.809783e-52 | -8.615850e-47 |
| Msa0033880 | Msa1128990 | 0.807339 | 5.305954e-50 | -8.615850e-47 |
| Msa0036370 | Msa1128990 | 0.810157 | 1.325125e-50 | -8.615850e-47 |
| Msa0101180 | Msa1128990 | 0.804166 | 2.461107e-49 | -8.615850e-47 |
| Msa0115370 | Msa1128990 | 0.809095 | 2.241393e-50 | -8.615850e-47 |
| Msa0603570 | Msa1128990 | 0.810981 | 8.795987e-51 | -8.615850e-47 |
| Msa0607510 | Msa1128990 | 0.808979 | 2.373164e-50 | -8.615850e-47 |
| Msa0609000 | Msa1128990 | 0.835274 | 1.845963e-56 | -8.615850e-47 |
| Msa0609220 | Msa1128990 | 0.821163 | 4.672414e-53 | -8.615850e-47 |
| Msa0610390 | Msa1128990 | 0.800027 | 1.747388e-48 | -8.615850e-47 |
| Msa0615580 | Msa1128990 | 0.821123 | 4.771815e-53 | -8.615850e-47 |
| Msa0618930 | Msa1128990 | 0.808590 | 2.873939e-50 | -8.615850e-47 |
| Msa0619860 | Msa1128990 | 0.812650 | 3.810865e-51 | -8.615850e-47 |
| Msa0646130 | Msa1128990 | 0.801230 | 9.933498e-49 | -8.615850e-47 |
| Msa0666230 | Msa1128990 | 0.825652 | 4.171544e-54 | -8.615850e-47 |
| Msa0669720 | Msa1128990 | 0.818196 | 2.223225e-52 | -8.615850e-47 |
| Msa0687230 | Msa1128990 | 0.801155 | 1.029043e-48 | -8.615850e-47 |
| Msa0693210 | Msa1128990 | 0.801071 | 1.070437e-48 | -8.615850e-47 |
| Msa0694990 | Msa1128990 | 0.822268 | 2.594764e-53 | -8.615850e-47 |
| Msa0699190 | Msa1128990 | 0.811760 | 5.957630e-51 | -8.615850e-47 |
| Msa0705820 | Msa1128990 | 0.803193 | 3.917795e-49 | -8.615850e-47 |
| Msa0718740 | Msa1128990 | 0.804610 | 1.988759e-49 | -8.615850e-47 |
| Msa0735310 | Msa1128990 | 0.804180 | 2.444724e-49 | -8.615850e-47 |
| Msa0742510 | Msa1128990 | 0.827560 | 1.462363e-54 | -8.615850e-47 |
| Msa0743530 | Msa1128990 | 0.807504 | 4.893698e-50 | -8.615850e-47 |
| Msa0751010 | Msa1128990 | 0.825247 | 5.200274e-54 | -8.615850e-47 |
| Msa0766670 | Msa1128990 | 0.812223 | 4.724551e-51 | -8.615850e-47 |
| Msa0774750 | Msa1128990 | 0.812131 | 4.947055e-51 | -8.615850e-47 |
| Msa0779550 | Msa1128990 | 0.819467 | 1.144048e-52 | -8.615850e-47 |
| Msa0794050 | Msa1128990 | 0.832975 | 6.952686e-56 | -8.615850e-47 |
| Msa0818770 | Msa1128990 | 0.820955 | 5.216798e-53 | -8.615850e-47 |
| Msa0822170 | Msa1128990 | 0.828110 | 1.078450e-54 | -8.615850e-47 |
| Msa0833190 | Msa1128990 | -0.831173 | 1.939294e-55 | -8.615850e-47 |
| Msa0126770 | Msa1128990 | 0.810178 | 1.311528e-50 | -8.615850e-47 |
| Msa0126840 | Msa1128990 | 0.806744 | 7.090832e-50 | -8.615850e-47 |
| Msa0127850 | Msa1128990 | 0.801205 | 1.004911e-48 | -8.615850e-47 |
| Msa0147980 | Msa1128990 | 0.805357 | 1.388198e-49 | -8.615850e-47 |
| Msa0166750 | Msa1128990 | 0.803500 | 3.384694e-49 | -8.615850e-47 |
| Msa0167480 | Msa1128990 | 0.811948 | 5.422154e-51 | -8.615850e-47 |
| Msa0169300 | Msa1128990 | 0.809017 | 2.329375e-50 | -8.615850e-47 |
| Msa0174000 | Msa1128990 | 0.813378 | 2.638032e-51 | -8.615850e-47 |
| Msa0183870 | Msa1128990 | 0.812643 | 3.824186e-51 | -8.615850e-47 |
| Msa0188350 | Msa1128990 | 0.815265 | 1.009945e-51 | -8.615850e-47 |
| Msa0190120 | Msa1128990 | 0.824404 | 8.223244e-54 | -8.615850e-47 |
| Msa0226460 | Msa1128990 | 0.811985 | 5.322657e-51 | -8.615850e-47 |
| Msa0231100 | Msa1128990 | 0.821700 | 3.513023e-53 | -8.615850e-47 |
| Msa0236270 | Msa1128990 | 0.804646 | 1.954918e-49 | -8.615850e-47 |
| Msa0384880 | Msa1128990 | 0.815938 | 7.154429e-52 | -8.615850e-47 |
| Msa0389510 | Msa1128990 | 0.806577 | 7.687771e-50 | -8.615850e-47 |
| Msa0419520 | Msa1128990 | 0.810060 | 1.390879e-50 | -8.615850e-47 |
| Msa0423750 | Msa1128990 | 0.809195 | 2.133367e-50 | -8.615850e-47 |
| Msa0431770 | Msa1128990 | 0.810024 | 1.415423e-50 | -8.615850e-47 |
| Msa0436200 | Msa1128990 | 0.804405 | 2.194297e-49 | -8.615850e-47 |
| Msa0443390 | Msa1128990 | 0.823989 | 1.029266e-53 | -8.615850e-47 |
| Msa0479330 | Msa1128990 | 0.840370 | 9.056409e-58 | -8.615850e-47 |
| Msa0994290 | Msa1128990 | 0.817138 | 3.851970e-52 | -8.615850e-47 |
| Msa1019240 | Msa1128990 | 0.811348 | 7.322805e-51 | -8.615850e-47 |
| Msa1025940 | Msa1128990 | 0.806632 | 7.485174e-50 | -8.615850e-47 |
| Msa1029970 | Msa1128990 | 0.822310 | 2.536911e-53 | -8.615850e-47 |
| Msa1038740 | Msa1128990 | 0.816677 | 4.889580e-52 | -8.615850e-47 |
| Msa1070390 | Msa1128990 | 0.825298 | 5.059537e-54 | -8.615850e-47 |
| Msa1084500 | Msa1128990 | -0.802686 | 4.988010e-49 | -8.615850e-47 |
| Msa1104210 | Msa1128990 | 0.810408 | 1.170026e-50 | -8.615850e-47 |
| Msa0259160 | Msa1128990 | 0.829425 | 5.185026e-55 | -8.615850e-47 |
| Msa0262480 | Msa1128990 | 0.807696 | 4.456484e-50 | -8.615850e-47 |
| Msa0271890 | Msa1128990 | 0.803286 | 3.747564e-49 | -8.615850e-47 |
| Msa0291520 | Msa1128990 | 0.809096 | 2.240697e-50 | -8.615850e-47 |
| Msa0296250 | Msa1128990 | 0.833762 | 4.426557e-56 | -8.615850e-47 |
| Msa0296790 | Msa1128990 | 0.817420 | 3.328626e-52 | -8.615850e-47 |
| Msa0296920 | Msa1128990 | 0.801133 | 1.039472e-48 | -8.615850e-47 |
| Msa0300350 | Msa1128990 | 0.816704 | 4.821134e-52 | -8.615850e-47 |
| Msa0304660 | Msa1128990 | 0.803852 | 2.860666e-49 | -8.615850e-47 |
| Msa0310860 | Msa1128990 | 0.800922 | 1.147975e-48 | -8.615850e-47 |
| Msa0320590 | Msa1128990 | 0.826615 | 2.462113e-54 | -8.615850e-47 |
| Msa0331700 | Msa1128990 | 0.803060 | 4.175026e-49 | -8.615850e-47 |
| Msa0358510 | Msa1128990 | 0.804708 | 1.897734e-49 | -8.615850e-47 |
| Msa1120810 | Msa1128990 | 0.818449 | 1.949012e-52 | -8.615850e-47 |
| Msa1122820 | Msa1128990 | 0.801145 | 1.033938e-48 | -8.615850e-47 |
| Msa1125790 | Msa1128990 | -0.824198 | 9.189664e-54 | -8.615850e-47 |
| Msa1126850 | Msa1128990 | 0.842637 | 2.289363e-58 | -8.615850e-47 |
| Msa1128860 | Msa1128990 | 0.826448 | 2.697730e-54 | -8.615850e-47 |
| Msa1128990 | Msa1131560 | 0.823986 | 1.030667e-53 | -8.615850e-47 |
| Msa1128990 | Msa1132310 | 0.804987 | 1.658935e-49 | -8.615850e-47 |
| Msa1128990 | Msa1154490 | 0.816164 | 6.367209e-52 | -8.615850e-47 |
| Msa1128990 | Msa1165780 | 0.820476 | 6.722674e-53 | -8.615850e-47 |
| Msa1128990 | Msa1165960 | 0.819366 | 1.206082e-52 | -8.615850e-47 |
| Msa1128990 | Msa1166870 | 0.826055 | 3.347123e-54 | -8.615850e-47 |
| Msa1128990 | Msa1188560 | 0.840751 | 7.198396e-58 | -8.615850e-47 |
| Msa1128990 | Msa1192850 | 0.836336 | 9.931148e-57 | -8.615850e-47 |
| Msa1128990 | Msa1201810 | 0.845429 | 4.083582e-59 | -8.615850e-47 |
| Msa1128990 | Msa1202580 | 0.824224 | 9.063751e-54 | -8.615850e-47 |
| Msa1128990 | Msa1213770 | 0.816949 | 4.248750e-52 | -8.615850e-47 |
| Msa1128990 | Msa1228970 | 0.806676 | 7.329287e-50 | -8.615850e-47 |
| Msa1128990 | Msa1235530 | 0.814711 | 1.340203e-51 | -8.615850e-47 |
| Msa1128990 | Msa1248430 | 0.809026 | 2.318696e-50 | -8.615850e-47 |
| Msa1128990 | Msa1253810 | 0.831077 | 2.047481e-55 | -8.615850e-47 |
| Msa1128990 | Msa1262890 | 0.809841 | 1.550480e-50 | -8.615850e-47 |
| Msa1128990 | Msa1271580 | 0.819962 | 8.819010e-53 | -8.615850e-47 |
| Msa1128990 | Msa1276970 | 0.810027 | 1.413652e-50 | -8.615850e-47 |
| Msa1128990 | Msa1293590 | 0.806925 | 6.491781e-50 | -8.615850e-47 |
| Msa1128990 | Msa1296300 | 0.811755 | 5.973398e-51 | -8.615850e-47 |
| Msa1128990 | Msa1296830 | 0.830434 | 2.943496e-55 | -8.615850e-47 |
| Msa1128990 | Msa1299700 | 0.803075 | 4.145088e-49 | -8.615850e-47 |
| Msa1128990 | Msa1307600 | 0.800399 | 1.468102e-48 | -8.615850e-47 |
| Msa1128990 | Msa1323990 | 0.805099 | 1.571697e-49 | -8.615850e-47 |
| Msa1128990 | Msa1327490 | 0.834100 | 3.643868e-56 | -8.615850e-47 |
| Msa1128990 | Msa1331250 | 0.805560 | 1.258501e-49 | -8.615850e-47 |
| Msa1128990 | Msa1351540 | 0.820183 | 7.848093e-53 | -8.615850e-47 |
| Msa1128990 | Msa1358430 | 0.801139 | 1.036701e-48 | -8.615850e-47 |
| Msa1128990 | Msa1360140 | 0.829544 | 4.852154e-55 | -8.615850e-47 |
| Msa1128990 | Msa1369190 | 0.801973 | 6.991836e-49 | -8.615850e-47 |
| Msa1128990 | Msa1381650 | 0.820775 | 5.738981e-53 | -8.615850e-47 |
| Msa1128990 | Msa1397940 | 0.813412 | 2.593554e-51 | -8.615850e-47 |
| Msa1128990 | Msa1400820 | 0.802015 | 6.855656e-49 | -8.615850e-47 |
| Msa1128990 | Msa1436520 | 0.805194 | 1.501803e-49 | -8.615850e-47 |
| Msa1128990 | Msa1438050 | 0.822310 | 2.536720e-53 | -8.615850e-47 |
| Msa1128990 | Msa1465260 | 0.801703 | 7.944490e-49 | -8.615850e-47 |
| Msa0503530 | Msa1128990 | 0.834487 | 2.912702e-56 | -8.615850e-47 |
| Msa0508590 | Msa1128990 | 0.810631 | 1.046904e-50 | -8.615850e-47 |
| Msa0511770 | Msa1128990 | 0.804486 | 2.111275e-49 | -8.615850e-47 |
| Msa0524590 | Msa1128990 | 0.802664 | 5.040516e-49 | -8.615850e-47 |
| Msa0580230 | Msa1128990 | 0.811082 | 8.362148e-51 | -8.615850e-47 |
| Msa0581130 | Msa1128990 | 0.816822 | 4.535594e-52 | -8.615850e-47 |
| Msa0593700 | Msa1128990 | 0.805971 | 1.031714e-49 | -8.615850e-47 |
| Msa0858440 | Msa1128990 | 0.820209 | 7.740417e-53 | -8.615850e-47 |
| Msa0862650 | Msa1128990 | 0.824201 | 9.175594e-54 | -8.615850e-47 |
| Msa0869010 | Msa1128990 | 0.803451 | 3.463907e-49 | -8.615850e-47 |
| Msa0944200 | Msa1128990 | 0.827526 | 1.490368e-54 | -8.615850e-47 |
| Msa0957450 | Msa1128990 | -0.853927 | 1.728424e-61 | -8.615850e-47 |
| Msa0960830 | Msa1128990 | 0.864957 | 8.364902e-65 | -8.615850e-47 |
| Msa0963020 | Msa1128990 | 0.835401 | 1.714681e-56 | -8.615850e-47 |
| Msa0971160 | Msa1128990 | 0.801914 | 7.190414e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128990 | MtrunA17_Chr7g0273521 | 100.000 | 176 | 0 | 0 | 27 | 202 | 1 | 176 | 8.62e-134 | 372 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1128990 | AT3G05000.1 | 81.818 | 176 | 29 | 2 | 27 | 202 | 1 | 173 | 1.19e-106 | 303 |
Find 65 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACTTGTGTTTCTTTAC+AGG | 0.160677 | 7_3:-80882820 | Msa1128990:three_prime_UTR |
| TTCATGGAGATTACGATAAT+TGG | 0.205655 | 7_3:-80882963 | Msa1128990:three_prime_UTR |
| ATTCCCCACTCCAGCAGATT+TGG | 0.268780 | 7_3:+80883097 | None:intergenic |
| GCCTCTTTCAGATCCATATA+AGG | 0.276051 | 7_3:+80885546 | None:intergenic |
| GGTAATAGAAATTCCTTATA+TGG | 0.320533 | 7_3:-80885559 | Msa1128990:CDS |
| GCCTCGGTTTGGTGATCATT+TGG | 0.323253 | 7_3:-80884920 | Msa1128990:CDS |
| AGCTAATCCTCCAGACAAAA+AGG | 0.325927 | 7_3:+80882770 | None:intergenic |
| ATTAGCTTAAATTTATATAT+CGG | 0.328891 | 7_3:-80882754 | Msa1128990:three_prime_UTR |
| TTCCCATGTGGGATCATTAG+AGG | 0.342467 | 7_3:-80884581 | Msa1128990:CDS |
| GATCGAAGCCATTGGTTATC+AGG | 0.347972 | 7_3:-80885310 | Msa1128990:CDS |
| ATCCTGCGAGCAGCGAGTTC+AGG | 0.362814 | 7_3:+80885330 | None:intergenic |
| AATGTTATATCCCTCTTGTA+TGG | 0.381414 | 7_3:-80882874 | Msa1128990:three_prime_UTR |
| TTCCCCACTCCAGCAGATTT+GGG | 0.382004 | 7_3:+80883098 | None:intergenic |
| GATATACGATGGAGCGGCCT+CGG | 0.415640 | 7_3:-80884936 | Msa1128990:CDS |
| TAGAGGAGCTCTTTCCAACT+TGG | 0.425869 | 7_3:-80884564 | Msa1128990:CDS |
| TGCACCTACGGCTGAAAGTA+AGG | 0.438829 | 7_3:-80884633 | Msa1128990:CDS |
| GCTCACATAGTCACATACTA+TGG | 0.452806 | 7_3:-80882934 | Msa1128990:three_prime_UTR |
| GGCAATTAAGTTCATTTGCA+AGG | 0.458740 | 7_3:-80884896 | Msa1128990:CDS |
| AGCAGCGAGTTCAGGTTTGT+TGG | 0.468848 | 7_3:+80885338 | None:intergenic |
| GGCTGAAAGTAAGGCAGCAC+AGG | 0.488115 | 7_3:-80884624 | Msa1128990:CDS |
| ACGATGGAGCGGCCTCGGTT+TGG | 0.496970 | 7_3:-80884931 | Msa1128990:CDS |
| ATAAATTTCCGTGGCTTGCA+CGG | 0.497008 | 7_3:-80884706 | Msa1128990:CDS |
| AGAGGAGCTCTTTCCAACTT+GGG | 0.498177 | 7_3:-80884563 | Msa1128990:CDS |
| TCCGTGGCTTGCACGGATGT+CGG | 0.520572 | 7_3:-80884699 | Msa1128990:CDS |
| TCGGTTTGGTGATCATTTGG+AGG | 0.520959 | 7_3:-80884917 | Msa1128990:CDS |
| TGCATCTTTATTTCCCATGT+GGG | 0.524113 | 7_3:-80884592 | Msa1128990:CDS |
| AAAGAAACACAAGTAACAAA+AGG | 0.525618 | 7_3:+80882825 | None:intergenic |
| ACAACTTGAAAACTAACCAT+AGG | 0.528003 | 7_3:-80884840 | Msa1128990:CDS |
| CATTTGTATTACTGATGTGA+GGG | 0.543685 | 7_3:-80883177 | Msa1128990:three_prime_UTR |
| AACCTGAACTCGCTGCTCGC+AGG | 0.543806 | 7_3:-80885332 | Msa1128990:CDS |
| CAACTTGAAAACTAACCATA+GGG | 0.547452 | 7_3:-80884839 | Msa1128990:intron |
| TCCTTATATGGATCTGAAAG+AGG | 0.547585 | 7_3:-80885547 | Msa1128990:CDS |
| TGATAATGTTAGTTCAGTTG+AGG | 0.553497 | 7_3:-80884663 | Msa1128990:CDS |
| TGCACAGGGAATTCCCAAGT+TGG | 0.556321 | 7_3:+80884550 | None:intergenic |
| TGAGGATTATTCTGCACCTA+CGG | 0.558019 | 7_3:-80884645 | Msa1128990:CDS |
| GCTGCCTTACTTTCAGCCGT+AGG | 0.558260 | 7_3:+80884629 | None:intergenic |
| ACCGACATCCGTGCAAGCCA+CGG | 0.566327 | 7_3:+80884698 | None:intergenic |
| TATGTCTGCAGAAACTGCAC+AGG | 0.568585 | 7_3:+80884535 | None:intergenic |
| TTCAGAGAGTGAAAATGGTG+AGG | 0.569906 | 7_3:-80885431 | Msa1128990:intron |
| GAACTAACATTATCAGTGGA+TGG | 0.571137 | 7_3:+80884671 | None:intergenic |
| TATGGATCTGAAAGAGGCAA+AGG | 0.571684 | 7_3:-80885541 | Msa1128990:CDS |
| TCATTTGTATTACTGATGTG+AGG | 0.576744 | 7_3:-80883178 | Msa1128990:three_prime_UTR |
| GGGGATACGCACATGCTGGA+AGG | 0.585352 | 7_3:+80884507 | None:intergenic |
| TTGCGTTGATAGCTTGATGA+CGG | 0.587460 | 7_3:-80885394 | Msa1128990:CDS |
| GTGCACTGTTGAAAGACAAT+GGG | 0.593198 | 7_3:-80882912 | Msa1128990:three_prime_UTR |
| TAGCATTCGTTCCATACAAG+AGG | 0.596722 | 7_3:+80882863 | None:intergenic |
| TGCAAGATAATAAATTTCCG+TGG | 0.603647 | 7_3:-80884715 | Msa1128990:CDS |
| TCAGAGAGTGAAAATGGTGA+GGG | 0.605160 | 7_3:-80885430 | Msa1128990:intron |
| TCGGTCAACAGCTCTCTGAA+AGG | 0.608978 | 7_3:-80885287 | Msa1128990:intron |
| ATGCATCTTTATTTCCCATG+TGG | 0.611221 | 7_3:-80884593 | Msa1128990:CDS |
| GCTCGCAGGATCGAAGCCAT+TGG | 0.613190 | 7_3:-80885318 | Msa1128990:CDS |
| GAAGCCATTGGTTATCAGGT+CGG | 0.622295 | 7_3:-80885306 | Msa1128990:CDS |
| GCTCCTCTAATGATCCCACA+TGG | 0.623231 | 7_3:+80884578 | None:intergenic |
| AACTGAACTAACATTATCAG+TGG | 0.624516 | 7_3:+80884667 | None:intergenic |
| TTGACCGACCTGATAACCAA+TGG | 0.626958 | 7_3:+80885302 | None:intergenic |
| TGTGTAATTCAGATATACGA+TGG | 0.627817 | 7_3:-80884947 | Msa1128990:intron |
| TGATAGCTTGATGACGGAGA+TGG | 0.641800 | 7_3:-80885388 | Msa1128990:CDS |
| ATTTGTATTACTGATGTGAG+GGG | 0.649119 | 7_3:-80883176 | Msa1128990:three_prime_UTR |
| GGTGCACTGTTGAAAGACAA+TGG | 0.652678 | 7_3:-80882913 | Msa1128990:three_prime_UTR |
| CTCCTCTAATGATCCCACAT+GGG | 0.669983 | 7_3:+80884579 | None:intergenic |
| AGCATTCGTTCCATACAAGA+GGG | 0.672193 | 7_3:+80882864 | None:intergenic |
| AATTCAGATATACGATGGAG+CGG | 0.678919 | 7_3:-80884942 | Msa1128990:intron |
| TCCAAATGATCACCAAACCG+AGG | 0.695841 | 7_3:+80884919 | None:intergenic |
| ATGTCTGCAGAAACTGCACA+GGG | 0.724210 | 7_3:+80884536 | None:intergenic |
| AAACACGATGATGAGTAGCG+AGG | 0.747363 | 7_3:-80885518 | Msa1128990:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTGATATTAATTATTTT+TGG | - | chr7_3:80883115-80883134 | Msa1128990:intron | 10.0% |
| !! | AAATAAAAAAAATAAACTTC+AGG | + | chr7_3:80884370-80884389 | None:intergenic | 10.0% |
| !!! | ATTAGCTTAAATTTATATAT+CGG | - | chr7_3:80885550-80885569 | Msa1128990:CDS | 10.0% |
| !!! | TGATATTAATTATTTTTGGT+AGG | - | chr7_3:80883119-80883138 | Msa1128990:intron | 15.0% |
| !! | TTGAATGTATAGATATATAT+TGG | - | chr7_3:80883501-80883520 | Msa1128990:intron | 15.0% |
| !!! | TGAATAATTTTATTCCATAA+TGG | + | chr7_3:80884484-80884503 | None:intergenic | 15.0% |
| !! | ATGGAATAAAATTATTCAAA+AGG | - | chr7_3:80884486-80884505 | Msa1128990:intron | 15.0% |
| !! | TCATGAAATTGTAATCAAAT+TGG | - | chr7_3:80883164-80883183 | Msa1128990:three_prime_UTR | 20.0% |
| !!! | TTTTCATTTTTAGTGTTTTC+TGG | - | chr7_3:80883883-80883902 | Msa1128990:intron | 20.0% |
| !!! | AAAGTTTCTTTGTTAGATTT+TGG | - | chr7_3:80884042-80884061 | Msa1128990:intron | 20.0% |
| !! | TGCTCTAATATTTATAAACA+TGG | + | chr7_3:80884713-80884732 | None:intergenic | 20.0% |
| !! | AAATATGTAAACAAGACAAA+TGG | + | chr7_3:80885035-80885054 | None:intergenic | 20.0% |
| !!! | ATATCCTTTTACACATTATT+TGG | - | chr7_3:80885066-80885085 | Msa1128990:intron | 20.0% |
| !!! | ATGAAGTGTTTTGATAAATT+AGG | - | chr7_3:80885293-80885312 | Msa1128990:CDS | 20.0% |
| !!! | TTTTGATAAATTAGGACTTT+TGG | - | chr7_3:80885301-80885320 | Msa1128990:CDS | 20.0% |
| ! | GGTAATAGAAATTCCTTATA+TGG | - | chr7_3:80882745-80882764 | Msa1128990:three_prime_UTR | 25.0% |
| !! | ATTTTCTCGAATTACTACAT+AGG | + | chr7_3:80883232-80883251 | None:intergenic | 25.0% |
| !!! | ACACAAGAGAAGTTTTTTTA+AGG | - | chr7_3:80883845-80883864 | Msa1128990:intron | 25.0% |
| ! | TGTGAATAATTTGATCTGTT+TGG | - | chr7_3:80883934-80883953 | Msa1128990:intron | 25.0% |
| ! | TGTTTGGAAATGTTTAAACA+GGG | - | chr7_3:80883950-80883969 | Msa1128990:intron | 25.0% |
| ! | TTTATTGATCAAATCTCTGT+TGG | - | chr7_3:80884072-80884091 | Msa1128990:intron | 25.0% |
| ! | TTATTGATCAAATCTCTGTT+GGG | - | chr7_3:80884073-80884092 | Msa1128990:intron | 25.0% |
| !! | GAACTTATCAAGCTTTTATA+CGG | + | chr7_3:80885108-80885127 | None:intergenic | 25.0% |
| !! | ACTATCAAATACTATTGACT+TGG | - | chr7_3:80885250-80885269 | Msa1128990:intron | 25.0% |
| ! | ATTTATCAAAACACTTCATC+TGG | + | chr7_3:80885292-80885311 | None:intergenic | 25.0% |
| ! | AAAGAAACACAAGTAACAAA+AGG | + | chr7_3:80885482-80885501 | None:intergenic | 25.0% |
| !! | TTTTCACTCTCTGAAGAAAA+TGG | + | chr7_3:80882868-80882887 | None:intergenic | 30.0% |
| ! | TTTTCTTCAGAGAGTGAAAA+TGG | - | chr7_3:80882868-80882887 | Msa1128990:three_prime_UTR | 30.0% |
| GATGAAGAAAGAGAGAATTA+GGG | + | chr7_3:80883057-80883076 | None:intergenic | 30.0% | |
| AGATGAAGAAAGAGAGAATT+AGG | + | chr7_3:80883058-80883077 | None:intergenic | 30.0% | |
| TGTGTAATTCAGATATACGA+TGG | - | chr7_3:80883357-80883376 | Msa1128990:intron | 30.0% | |
| ! | AGTTCATTTGCAAGGATTTT+TGG | - | chr7_3:80883416-80883435 | Msa1128990:intron | 30.0% |
| ACAACTTGAAAACTAACCAT+AGG | - | chr7_3:80883464-80883483 | Msa1128990:intron | 30.0% | |
| CAACTTGAAAACTAACCATA+GGG | - | chr7_3:80883465-80883484 | Msa1128990:intron | 30.0% | |
| ! | TTTTTGTGTTCTGATTTCGA+TGG | - | chr7_3:80883526-80883545 | Msa1128990:intron | 30.0% |
| TGCAAGATAATAAATTTCCG+TGG | - | chr7_3:80883589-80883608 | Msa1128990:intron | 30.0% | |
| AACTGAACTAACATTATCAG+TGG | + | chr7_3:80883640-80883659 | None:intergenic | 30.0% | |
| ! | TGATAATGTTAGTTCAGTTG+AGG | - | chr7_3:80883641-80883660 | Msa1128990:intron | 30.0% |
| CTGTTTGGAAATGTTTAAAC+AGG | - | chr7_3:80883949-80883968 | Msa1128990:intron | 30.0% | |
| ! | TAGACTAGTTCATACTCAAT+GGG | - | chr7_3:80883975-80883994 | Msa1128990:intron | 30.0% |
| TCTATGGTAAAAAACCAAGA+AGG | - | chr7_3:80884176-80884195 | Msa1128990:intron | 30.0% | |
| CTATGGTAAAAAACCAAGAA+GGG | - | chr7_3:80884177-80884196 | Msa1128990:intron | 30.0% | |
| TATGGTAAAAAACCAAGAAG+GGG | - | chr7_3:80884178-80884197 | Msa1128990:intron | 30.0% | |
| !! | ACTTCAGGTTTATTTCTAAC+TGG | + | chr7_3:80884355-80884374 | None:intergenic | 30.0% |
| CGATATATCTCTTTCCATTA+TGG | - | chr7_3:80884467-80884486 | Msa1128990:intron | 30.0% | |
| CACGAACATAACTTCAATAT+TGG | - | chr7_3:80884763-80884782 | Msa1128990:intron | 30.0% | |
| AACATAACTTCAATATTGGC+AGG | - | chr7_3:80884767-80884786 | Msa1128990:intron | 30.0% | |
| TCACATATTCAGTTTATACC+TGG | - | chr7_3:80884855-80884874 | Msa1128990:CDS | 30.0% | |
| CTGTATTTGACACAAAATGA+AGG | + | chr7_3:80884965-80884984 | None:intergenic | 30.0% | |
| TCATTTGTATTACTGATGTG+AGG | - | chr7_3:80885126-80885145 | Msa1128990:intron | 30.0% | |
| CATTTGTATTACTGATGTGA+GGG | - | chr7_3:80885127-80885146 | Msa1128990:intron | 30.0% | |
| ATTTGTATTACTGATGTGAG+GGG | - | chr7_3:80885128-80885147 | Msa1128990:intron | 30.0% | |
| !!! | ATTAGGACTTTTGGTTCTTT+TGG | - | chr7_3:80885310-80885329 | Msa1128990:CDS | 30.0% |
| TTCATGGAGATTACGATAAT+TGG | - | chr7_3:80885341-80885360 | Msa1128990:CDS | 30.0% | |
| AATGTTATATCCCTCTTGTA+TGG | - | chr7_3:80885430-80885449 | Msa1128990:intron | 30.0% | |
| ! | TGTTACTTGTGTTTCTTTAC+AGG | - | chr7_3:80885484-80885503 | Msa1128990:intron | 30.0% |
| ! | TTTTCCTTTTCCTTTTTGTC+TGG | - | chr7_3:80885524-80885543 | Msa1128990:CDS | 30.0% |
| TCCTTATATGGATCTGAAAG+AGG | - | chr7_3:80882757-80882776 | Msa1128990:three_prime_UTR | 35.0% | |
| CTGTTATCACACAACATAGT+AGG | - | chr7_3:80883082-80883101 | Msa1128990:intron | 35.0% | |
| AATTCAGATATACGATGGAG+CGG | - | chr7_3:80883362-80883381 | Msa1128990:intron | 35.0% | |
| GGCAATTAAGTTCATTTGCA+AGG | - | chr7_3:80883408-80883427 | Msa1128990:intron | 35.0% | |
| ! | TCGATGGTTGTGTTGTTATT+TGG | - | chr7_3:80883542-80883561 | Msa1128990:intron | 35.0% |
| GAACTAACATTATCAGTGGA+TGG | + | chr7_3:80883636-80883655 | None:intergenic | 35.0% | |
| ! | ATGCATCTTTATTTCCCATG+TGG | - | chr7_3:80883711-80883730 | Msa1128990:intron | 35.0% |
| ! | TGCATCTTTATTTCCCATGT+GGG | - | chr7_3:80883712-80883731 | Msa1128990:intron | 35.0% |
| ! | CTAGACTAGTTCATACTCAA+TGG | - | chr7_3:80883974-80883993 | Msa1128990:intron | 35.0% |
| ! | CATCATTGACTGATTCTCTA+TGG | - | chr7_3:80884160-80884179 | Msa1128990:intron | 35.0% |
| ACAAAACTATCTCTGTGATC+AGG | - | chr7_3:80884293-80884312 | Msa1128990:intron | 35.0% | |
| !! | CAGGTTTATTTCTAACTGGA+GGG | + | chr7_3:80884351-80884370 | None:intergenic | 35.0% |
| !! | TCAGGTTTATTTCTAACTGG+AGG | + | chr7_3:80884352-80884371 | None:intergenic | 35.0% |
| !! | AAAAGGTGCTGATAGTAAAG+TGG | - | chr7_3:80884503-80884522 | Msa1128990:intron | 35.0% |
| TTCACAGTTCACACATAAGA+GGG | - | chr7_3:80884657-80884676 | Msa1128990:CDS | 35.0% | |
| ! | ATTAGAGCATCTCATGATTC+AGG | - | chr7_3:80884724-80884743 | Msa1128990:CDS | 35.0% |
| ! | TATTAGCCTAAGATGCATAC+AGG | + | chr7_3:80884793-80884812 | None:intergenic | 35.0% |
| CAGTCTGTCATGAATAGATA+GGG | + | chr7_3:80884920-80884939 | None:intergenic | 35.0% | |
| ACAGTCTGTCATGAATAGAT+AGG | + | chr7_3:80884921-80884940 | None:intergenic | 35.0% | |
| CCTGCCAAATAATGTGTAAA+AGG | + | chr7_3:80885073-80885092 | None:intergenic | 35.0% | |
| ! | CCTTTTACACATTATTTGGC+AGG | - | chr7_3:80885070-80885089 | Msa1128990:intron | 35.0% |
| !! | TGACTTGGTTGTATAGAAAG+AGG | - | chr7_3:80885265-80885284 | Msa1128990:intron | 35.0% |
| GCCTCTTTCAGATCCATATA+AGG | + | chr7_3:80882761-80882780 | None:intergenic | 40.0% | |
| TATGGATCTGAAAGAGGCAA+AGG | - | chr7_3:80882763-80882782 | Msa1128990:three_prime_UTR | 40.0% | |
| TTCAGAGAGTGAAAATGGTG+AGG | - | chr7_3:80882873-80882892 | Msa1128990:three_prime_UTR | 40.0% | |
| TCAGAGAGTGAAAATGGTGA+GGG | - | chr7_3:80882874-80882893 | Msa1128990:three_prime_UTR | 40.0% | |
| !! | TTGCGTTGATAGCTTGATGA+CGG | - | chr7_3:80882910-80882929 | Msa1128990:three_prime_UTR | 40.0% |
| TGAATGTAGTCACATGTGTC+AGG | - | chr7_3:80883260-80883279 | Msa1128990:intron | 40.0% | |
| GAATGTAGTCACATGTGTCA+GGG | - | chr7_3:80883261-80883280 | Msa1128990:intron | 40.0% | |
| ! | GTCAGATAGGTTATGATGGA+TGG | - | chr7_3:80883283-80883302 | Msa1128990:intron | 40.0% |
| !!! | TTGCAAGGATTTTTGGTCTG+AGG | - | chr7_3:80883423-80883442 | Msa1128990:intron | 40.0% |
| AACGAATTCAACTCACCCTA+TGG | + | chr7_3:80883483-80883502 | None:intergenic | 40.0% | |
| !! | TTGTTATTTGGTTCTGCTGC+AGG | - | chr7_3:80883554-80883573 | Msa1128990:intron | 40.0% |
| !! | TGTTATTTGGTTCTGCTGCA+GGG | - | chr7_3:80883555-80883574 | Msa1128990:intron | 40.0% |
| ! | ATAAATTTCCGTGGCTTGCA+CGG | - | chr7_3:80883598-80883617 | Msa1128990:intron | 40.0% |
| TGAGGATTATTCTGCACCTA+CGG | - | chr7_3:80883659-80883678 | Msa1128990:intron | 40.0% | |
| CATGGGGTTTCTACTATTGT+GGG | - | chr7_3:80884211-80884230 | Msa1128990:intron | 40.0% | |
| ATGGGGTTTCTACTATTGTG+GGG | - | chr7_3:80884212-80884231 | Msa1128990:intron | 40.0% | |
| TACTATTGTGGGGTCTGATA+TGG | - | chr7_3:80884222-80884241 | Msa1128990:intron | 40.0% | |
| !!! | AGATAGTTTTGTGACCCTCT+CGG | + | chr7_3:80884285-80884304 | None:intergenic | 40.0% |
| ATACTGAAGCAACCAATGCA+GGG | + | chr7_3:80884557-80884576 | None:intergenic | 40.0% | |
| TATACTGAAGCAACCAATGC+AGG | + | chr7_3:80884558-80884577 | None:intergenic | 40.0% | |
| !! | TGCATTGGTTGCTTCAGTAT+AGG | - | chr7_3:80884557-80884576 | Msa1128990:CDS | 40.0% |
| CTTCACAGTTCACACATAAG+AGG | - | chr7_3:80884656-80884675 | Msa1128990:CDS | 40.0% | |
| AAGAGGGTCTAGGCATTTAT+AGG | - | chr7_3:80884673-80884692 | Msa1128990:CDS | 40.0% | |
| ACAATGACAACATGTACTCC+AGG | + | chr7_3:80884876-80884895 | None:intergenic | 40.0% | |
| AAGGAATTTGCAAGCAGCAA+TGG | + | chr7_3:80884946-80884965 | None:intergenic | 40.0% | |
| AGAGCAAGAACAAAGATGCT+TGG | + | chr7_3:80884990-80885009 | None:intergenic | 40.0% | |
| CAAGACAAATGGTCATGCAT+TGG | + | chr7_3:80885024-80885043 | None:intergenic | 40.0% | |
| !! | TCTTTTGGCTGCAGATTTCA+TGG | - | chr7_3:80885325-80885344 | Msa1128990:CDS | 40.0% |
| GCTCACATAGTCACATACTA+TGG | - | chr7_3:80885370-80885389 | Msa1128990:CDS | 40.0% | |
| GTGCACTGTTGAAAGACAAT+GGG | - | chr7_3:80885392-80885411 | Msa1128990:CDS | 40.0% | |
| AGCATTCGTTCCATACAAGA+GGG | + | chr7_3:80885443-80885462 | None:intergenic | 40.0% | |
| TAGCATTCGTTCCATACAAG+AGG | + | chr7_3:80885444-80885463 | None:intergenic | 40.0% | |
| ! | TCCTTTTCCTTTTTGTCTGG+AGG | - | chr7_3:80885527-80885546 | Msa1128990:CDS | 40.0% |
| TCCTCCAGACAAAAAGGAAA+AGG | + | chr7_3:80885531-80885550 | None:intergenic | 40.0% | |
| AGCTAATCCTCCAGACAAAA+AGG | + | chr7_3:80885537-80885556 | None:intergenic | 40.0% | |
| AAACACGATGATGAGTAGCG+AGG | - | chr7_3:80882786-80882805 | Msa1128990:three_prime_UTR | 45.0% | |
| !! | TGATAGCTTGATGACGGAGA+TGG | - | chr7_3:80882916-80882935 | Msa1128990:three_prime_UTR | 45.0% |
| ! | GATCGAAGCCATTGGTTATC+AGG | - | chr7_3:80882994-80883013 | Msa1128990:intron | 45.0% |
| ! | GAAGCCATTGGTTATCAGGT+CGG | - | chr7_3:80882998-80883017 | Msa1128990:intron | 45.0% |
| TTGACCGACCTGATAACCAA+TGG | + | chr7_3:80883005-80883024 | None:intergenic | 45.0% | |
| ! | TCAACAGCTCTCTGAAAGGT+TGG | - | chr7_3:80883021-80883040 | Msa1128990:intron | 45.0% |
| ACTACATAGGTCGTGCTTCA+TGG | + | chr7_3:80883219-80883238 | None:intergenic | 45.0% | |
| CAGGGTCAGATAGGTTATGA+TGG | - | chr7_3:80883279-80883298 | Msa1128990:intron | 45.0% | |
| TCCAAATGATCACCAAACCG+AGG | + | chr7_3:80883388-80883407 | None:intergenic | 45.0% | |
| !! | TCGGTTTGGTGATCATTTGG+AGG | - | chr7_3:80883387-80883406 | Msa1128990:intron | 45.0% |
| TTCCCATGTGGGATCATTAG+AGG | - | chr7_3:80883723-80883742 | Msa1128990:intron | 45.0% | |
| CTCCTCTAATGATCCCACAT+GGG | + | chr7_3:80883728-80883747 | None:intergenic | 45.0% | |
| TAGAGGAGCTCTTTCCAACT+TGG | - | chr7_3:80883740-80883759 | Msa1128990:intron | 45.0% | |
| AGAGGAGCTCTTTCCAACTT+GGG | - | chr7_3:80883741-80883760 | Msa1128990:intron | 45.0% | |
| ATGTCTGCAGAAACTGCACA+GGG | + | chr7_3:80883771-80883790 | None:intergenic | 45.0% | |
| TATGTCTGCAGAAACTGCAC+AGG | + | chr7_3:80883772-80883791 | None:intergenic | 45.0% | |
| GGTAAAAAACCAAGAAGGGG+CGG | - | chr7_3:80884181-80884200 | Msa1128990:intron | 45.0% | |
| GCATGGGGTTTCTACTATTG+TGG | - | chr7_3:80884210-80884229 | Msa1128990:intron | 45.0% | |
| !! | TTTAGCCTTAGCCCTATGAG+TGG | - | chr7_3:80884255-80884274 | Msa1128990:intron | 45.0% |
| !!! | GATAGTTTTGTGACCCTCTC+GGG | + | chr7_3:80884284-80884303 | None:intergenic | 45.0% |
| TACTGAAGCAACCAATGCAG+GGG | + | chr7_3:80884556-80884575 | None:intergenic | 45.0% | |
| GTTCACACATAAGAGGGTCT+AGG | - | chr7_3:80884663-80884682 | Msa1128990:CDS | 45.0% | |
| ! | CTCTTTTGTCCCAAATCTGC+TGG | - | chr7_3:80885197-80885216 | Msa1128990:intron | 45.0% |
| GGTGCACTGTTGAAAGACAA+TGG | - | chr7_3:80885391-80885410 | Msa1128990:CDS | 45.0% | |
| ! | AGCAGCGAGTTCAGGTTTGT+TGG | + | chr7_3:80882969-80882988 | None:intergenic | 50.0% |
| TCGGTCAACAGCTCTCTGAA+AGG | - | chr7_3:80883017-80883036 | Msa1128990:intron | 50.0% | |
| CACATGTGTCAGGGTCAGAT+AGG | - | chr7_3:80883270-80883289 | Msa1128990:intron | 50.0% | |
| !! | GCCTCGGTTTGGTGATCATT+TGG | - | chr7_3:80883384-80883403 | Msa1128990:intron | 50.0% |
| TGCACCTACGGCTGAAAGTA+AGG | - | chr7_3:80883671-80883690 | Msa1128990:intron | 50.0% | |
| GCTCCTCTAATGATCCCACA+TGG | + | chr7_3:80883729-80883748 | None:intergenic | 50.0% | |
| TGCACAGGGAATTCCCAAGT+TGG | + | chr7_3:80883757-80883776 | None:intergenic | 50.0% | |
| TGTGTGTGAGAGAGGGAGAT+GGG | + | chr7_3:80883822-80883841 | None:intergenic | 50.0% | |
| GTGTGTGTGTGTGTGAGAGA+GGG | + | chr7_3:80883829-80883848 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGAGAG+AGG | + | chr7_3:80883830-80883849 | None:intergenic | 50.0% | |
| TCTAACTGGAGGGTGAGACT+TGG | + | chr7_3:80884341-80884360 | None:intergenic | 50.0% | |
| GGGTCTAGGCATTTATAGGC+TGG | - | chr7_3:80884677-80884696 | Msa1128990:CDS | 50.0% | |
| TTGTCCCAAATCTGCTGGAG+TGG | - | chr7_3:80885202-80885221 | Msa1128990:intron | 50.0% | |
| TGTCCCAAATCTGCTGGAGT+GGG | - | chr7_3:80885203-80885222 | Msa1128990:intron | 50.0% | |
| TTCCCCACTCCAGCAGATTT+GGG | + | chr7_3:80885209-80885228 | None:intergenic | 50.0% | |
| ATTCCCCACTCCAGCAGATT+TGG | + | chr7_3:80885210-80885229 | None:intergenic | 50.0% | |
| GATATACGATGGAGCGGCCT+CGG | - | chr7_3:80883368-80883387 | Msa1128990:intron | 55.0% | |
| GCTGCCTTACTTTCAGCCGT+AGG | + | chr7_3:80883678-80883697 | None:intergenic | 55.0% | |
| GGCTGAAAGTAAGGCAGCAC+AGG | - | chr7_3:80883680-80883699 | Msa1128990:intron | 55.0% | |
| TGTGTGAGAGAGGGAGATGG+GGG | + | chr7_3:80883820-80883839 | None:intergenic | 55.0% | |
| GTGTGTGAGAGAGGGAGATG+GGG | + | chr7_3:80883821-80883840 | None:intergenic | 55.0% | |
| GTGTGTGTGAGAGAGGGAGA+TGG | + | chr7_3:80883823-80883842 | None:intergenic | 55.0% | |
| TGCACTAAACCGCCCCTTCT+TGG | + | chr7_3:80884193-80884212 | None:intergenic | 55.0% | |
| AGAAGGGGCGGTTTAGTGCA+TGG | - | chr7_3:80884193-80884212 | Msa1128990:intron | 55.0% | |
| GAAGGGGCGGTTTAGTGCAT+GGG | - | chr7_3:80884194-80884213 | Msa1128990:intron | 55.0% | |
| AAGGGGCGGTTTAGTGCATG+GGG | - | chr7_3:80884195-80884214 | Msa1128990:intron | 55.0% | |
| GGTCTCCACTCATAGGGCTA+AGG | + | chr7_3:80884263-80884282 | None:intergenic | 55.0% | |
| CTCTCGGGTCTCCACTCATA+GGG | + | chr7_3:80884269-80884288 | None:intergenic | 55.0% | |
| CTATGAGTGGAGACCCGAGA+GGG | - | chr7_3:80884268-80884287 | Msa1128990:intron | 55.0% | |
| GATTCTACCAGCCCCTGCAT+TGG | - | chr7_3:80884542-80884561 | Msa1128990:CDS | 55.0% | |
| GGCAGGCCTGTATGCATCTT+AGG | - | chr7_3:80884784-80884803 | Msa1128990:intron | 55.0% | |
| GTCCCAAATCTGCTGGAGTG+GGG | - | chr7_3:80885204-80885223 | Msa1128990:intron | 55.0% | |
| AACCTGAACTCGCTGCTCGC+AGG | - | chr7_3:80882972-80882991 | Msa1128990:intron | 60.0% | |
| ATCCTGCGAGCAGCGAGTTC+AGG | + | chr7_3:80882977-80882996 | None:intergenic | 60.0% | |
| GCTCGCAGGATCGAAGCCAT+TGG | - | chr7_3:80882986-80883005 | Msa1128990:intron | 60.0% | |
| ! | TCCGTGGCTTGCACGGATGT+CGG | - | chr7_3:80883605-80883624 | Msa1128990:intron | 60.0% |
| ACCGACATCCGTGCAAGCCA+CGG | + | chr7_3:80883609-80883628 | None:intergenic | 60.0% | |
| GGGGATACGCACATGCTGGA+AGG | + | chr7_3:80883800-80883819 | None:intergenic | 60.0% | |
| ATGGGGGGATACGCACATGC+TGG | + | chr7_3:80883804-80883823 | None:intergenic | 60.0% | |
| GTGTGAGAGAGGGAGATGGG+GGG | + | chr7_3:80883819-80883838 | None:intergenic | 60.0% | |
| CCTCTCGGGTCTCCACTCAT+AGG | + | chr7_3:80884270-80884289 | None:intergenic | 60.0% | |
| CCTATGAGTGGAGACCCGAG+AGG | - | chr7_3:80884267-80884286 | Msa1128990:intron | 60.0% | |
| GAAGCAACCAATGCAGGGGC+TGG | + | chr7_3:80884552-80884571 | None:intergenic | 60.0% | |
| ACGATGGAGCGGCCTCGGTT+TGG | - | chr7_3:80883373-80883392 | Msa1128990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 80882739 | 80885587 | 80882739 | ID=Msa1128990;Name=Msa1128990 |
| chr7_3 | mRNA | 80882739 | 80885587 | 80882739 | ID=Msa1128990-mRNA-1;Parent=Msa1128990;Name=Msa1128990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.83|0.71|1|0.5|0.57|7|326|202 |
| chr7_3 | exon | 80882739 | 80882987 | 80882739 | ID=Msa1128990-mRNA-1:exon:23336;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80883106 | 80883121 | 80883106 | ID=Msa1128990-mRNA-1:exon:23335;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80883145 | 80883234 | 80883145 | ID=Msa1128990-mRNA-1:exon:23334;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80884519 | 80884750 | 80884519 | ID=Msa1128990-mRNA-1:exon:23333;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80884840 | 80884957 | 80884840 | ID=Msa1128990-mRNA-1:exon:23332;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80885288 | 80885448 | 80885288 | ID=Msa1128990-mRNA-1:exon:23331;Parent=Msa1128990-mRNA-1 |
| chr7_3 | exon | 80885519 | 80885587 | 80885519 | ID=Msa1128990-mRNA-1:exon:23330;Parent=Msa1128990-mRNA-1 |
| chr7_3 | CDS | 80885519 | 80885587 | 80885519 | ID=Msa1128990-mRNA-1:cds;Parent=Msa1128990-mRNA-1 |
| chr7_3 | CDS | 80885288 | 80885448 | 80885288 | ID=Msa1128990-mRNA-1:cds;Parent=Msa1128990-mRNA-1 |
| chr7_3 | CDS | 80884840 | 80884957 | 80884840 | ID=Msa1128990-mRNA-1:cds;Parent=Msa1128990-mRNA-1 |
| chr7_3 | CDS | 80884519 | 80884750 | 80884519 | ID=Msa1128990-mRNA-1:cds;Parent=Msa1128990-mRNA-1 |
| chr7_3 | CDS | 80883206 | 80883234 | 80883206 | ID=Msa1128990-mRNA-1:cds;Parent=Msa1128990-mRNA-1 |
| chr7_3 | three_prime_UTR | 80883145 | 80883205 | 80883145 | ID=Msa1128990-mRNA-1:three_prime_utr;Parent=Msa1128990-mRNA-1 |
| chr7_3 | three_prime_UTR | 80883106 | 80883121 | 80883106 | ID=Msa1128990-mRNA-1:three_prime_utr;Parent=Msa1128990-mRNA-1 |
| chr7_3 | three_prime_UTR | 80882739 | 80882987 | 80882739 | ID=Msa1128990-mRNA-1:three_prime_utr;Parent=Msa1128990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
