Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0861500 | XP_003610817.1 | 98.137 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0861500 | G7K556 | 98.137 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0861500 | 0.858005 | 1.108402e-62 | -8.615850e-47 |
| Msa0005270 | Msa0861500 | 0.822498 | 2.293834e-53 | -8.615850e-47 |
| Msa0020390 | Msa0861500 | 0.835396 | 1.719978e-56 | -8.615850e-47 |
| Msa0027890 | Msa0861500 | 0.839790 | 1.283582e-57 | -8.615850e-47 |
| Msa0031180 | Msa0861500 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
| Msa0038870 | Msa0861500 | 0.828199 | 1.026763e-54 | -8.615850e-47 |
| Msa0043730 | Msa0861500 | 0.801656 | 8.124702e-49 | -8.615850e-47 |
| Msa0043980 | Msa0861500 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0051450 | Msa0861500 | 0.802208 | 6.255876e-49 | -8.615850e-47 |
| Msa0051860 | Msa0861500 | 0.856593 | 2.896225e-62 | -8.615850e-47 |
| Msa0059890 | Msa0861500 | 0.827346 | 1.646212e-54 | -8.615850e-47 |
| Msa0071250 | Msa0861500 | 0.804191 | 2.431871e-49 | -8.615850e-47 |
| Msa0074750 | Msa0861500 | 0.804540 | 2.057088e-49 | -8.615850e-47 |
| Msa0077900 | Msa0861500 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0081650 | Msa0861500 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
| Msa0085370 | Msa0861500 | 0.830875 | 2.295230e-55 | -8.615850e-47 |
| Msa0086420 | Msa0861500 | 0.810054 | 1.394971e-50 | -8.615850e-47 |
| Msa0090550 | Msa0861500 | 0.829900 | 3.973085e-55 | -8.615850e-47 |
| Msa0091610 | Msa0861500 | 0.806112 | 9.636858e-50 | -8.615850e-47 |
| Msa0095360 | Msa0861500 | 0.807623 | 4.617716e-50 | -8.615850e-47 |
| Msa0096980 | Msa0861500 | 0.873082 | 1.936547e-67 | -8.615850e-47 |
| Msa0103790 | Msa0861500 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa0104800 | Msa0861500 | 0.800771 | 1.232893e-48 | -8.615850e-47 |
| Msa0108390 | Msa0861500 | 0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa0115370 | Msa0861500 | 0.809906 | 1.500697e-50 | -8.615850e-47 |
| Msa0604290 | Msa0861500 | 0.837282 | 5.698839e-57 | -8.615850e-47 |
| Msa0621650 | Msa0861500 | 0.809291 | 2.035168e-50 | -8.615850e-47 |
| Msa0628290 | Msa0861500 | 0.805353 | 1.390731e-49 | -8.615850e-47 |
| Msa0640940 | Msa0861500 | 0.811333 | 7.376950e-51 | -8.615850e-47 |
| Msa0641190 | Msa0861500 | 0.804686 | 1.917809e-49 | -8.615850e-47 |
| Msa0642970 | Msa0861500 | 0.819462 | 1.146923e-52 | -8.615850e-47 |
| Msa0643320 | Msa0861500 | 0.812257 | 4.644551e-51 | -8.615850e-47 |
| Msa0662630 | Msa0861500 | 0.826673 | 2.383813e-54 | -8.615850e-47 |
| Msa0679360 | Msa0861500 | 0.810600 | 1.063239e-50 | -8.615850e-47 |
| Msa0683140 | Msa0861500 | 0.802836 | 4.644191e-49 | -8.615850e-47 |
| Msa0683600 | Msa0861500 | 0.809895 | 1.509150e-50 | -8.615850e-47 |
| Msa0686080 | Msa0861500 | 0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0689500 | Msa0861500 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
| Msa0705820 | Msa0861500 | 0.811503 | 6.775685e-51 | -8.615850e-47 |
| Msa0709160 | Msa0861500 | 0.810050 | 1.397216e-50 | -8.615850e-47 |
| Msa0721280 | Msa0861500 | 0.830181 | 3.392669e-55 | -8.615850e-47 |
| Msa0726080 | Msa0861500 | 0.806928 | 6.482637e-50 | -8.615850e-47 |
| Msa0746170 | Msa0861500 | 0.805234 | 1.473084e-49 | -8.615850e-47 |
| Msa0746210 | Msa0861500 | 0.808657 | 2.780955e-50 | -8.615850e-47 |
| Msa0750850 | Msa0861500 | 0.830725 | 2.497832e-55 | -8.615850e-47 |
| Msa0756380 | Msa0861500 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0763890 | Msa0861500 | 0.810574 | 1.077324e-50 | -8.615850e-47 |
| Msa0763920 | Msa0861500 | 0.821404 | 4.111246e-53 | -8.615850e-47 |
| Msa0765180 | Msa0861500 | 0.811345 | 7.335275e-51 | -8.615850e-47 |
| Msa0773590 | Msa0861500 | 0.801502 | 8.735183e-49 | -8.615850e-47 |
| Msa0789560 | Msa0861500 | 0.824288 | 8.755597e-54 | -8.615850e-47 |
| Msa0800370 | Msa0861500 | 0.810225 | 1.281297e-50 | -8.615850e-47 |
| Msa0811040 | Msa0861500 | 0.807686 | 4.478306e-50 | -8.615850e-47 |
| Msa0826150 | Msa0861500 | 0.833965 | 3.939245e-56 | -8.615850e-47 |
| Msa0829220 | Msa0861500 | 0.818245 | 2.167400e-52 | -8.615850e-47 |
| Msa0832150 | Msa0861500 | 0.809578 | 1.765278e-50 | -8.615850e-47 |
| Msa0832340 | Msa0861500 | 0.807382 | 5.195376e-50 | -8.615850e-47 |
| Msa0126790 | Msa0861500 | 0.812953 | 3.270517e-51 | -8.615850e-47 |
| Msa0127850 | Msa0861500 | 0.801215 | 1.000271e-48 | -8.615850e-47 |
| Msa0138020 | Msa0861500 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa0145010 | Msa0861500 | 0.872534 | 2.954767e-67 | -8.615850e-47 |
| Msa0150260 | Msa0861500 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
| Msa0159420 | Msa0861500 | 0.802595 | 5.206624e-49 | -8.615850e-47 |
| Msa0167980 | Msa0861500 | 0.837670 | 4.532882e-57 | -8.615850e-47 |
| Msa0171870 | Msa0861500 | 0.814559 | 1.448665e-51 | -8.615850e-47 |
| Msa0183870 | Msa0861500 | 0.833138 | 6.333450e-56 | -8.615850e-47 |
| Msa0195630 | Msa0861500 | 0.839281 | 1.740472e-57 | -8.615850e-47 |
| Msa0204960 | Msa0861500 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
| Msa0217670 | Msa0861500 | 0.820710 | 5.940236e-53 | -8.615850e-47 |
| Msa0223330 | Msa0861500 | 0.845460 | 4.006809e-59 | -8.615850e-47 |
| Msa0223340 | Msa0861500 | 0.809706 | 1.657166e-50 | -8.615850e-47 |
| Msa0233370 | Msa0861500 | 0.801211 | 1.002053e-48 | -8.615850e-47 |
| Msa0237410 | Msa0861500 | 0.847450 | 1.147999e-59 | -8.615850e-47 |
| Msa0366210 | Msa0861500 | 0.813072 | 3.079364e-51 | -8.615850e-47 |
| Msa0381000 | Msa0861500 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0381080 | Msa0861500 | 0.807775 | 4.286008e-50 | -8.615850e-47 |
| Msa0382370 | Msa0861500 | 0.814021 | 1.904527e-51 | -8.615850e-47 |
| Msa0385500 | Msa0861500 | 0.813457 | 2.535339e-51 | -8.615850e-47 |
| Msa0395980 | Msa0861500 | 0.819864 | 9.285386e-53 | -8.615850e-47 |
| Msa0401560 | Msa0861500 | 0.817843 | 2.672872e-52 | -8.615850e-47 |
| Msa0403660 | Msa0861500 | 0.805042 | 1.615448e-49 | -8.615850e-47 |
| Msa0403770 | Msa0861500 | 0.803075 | 4.144344e-49 | -8.615850e-47 |
| Msa0411410 | Msa0861500 | 0.800207 | 1.605796e-48 | -8.615850e-47 |
| Msa0430870 | Msa0861500 | 0.809005 | 2.343449e-50 | -8.615850e-47 |
| Msa0432070 | Msa0861500 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa0432160 | Msa0861500 | 0.816288 | 5.974111e-52 | -8.615850e-47 |
| Msa0432500 | Msa0861500 | 0.820791 | 5.692126e-53 | -8.615850e-47 |
| Msa0435220 | Msa0861500 | 0.824993 | 5.971088e-54 | -8.615850e-47 |
| Msa0438040 | Msa0861500 | 0.802793 | 4.739720e-49 | -8.615850e-47 |
| Msa0446000 | Msa0861500 | 0.800851 | 1.187212e-48 | -8.615850e-47 |
| Msa0476680 | Msa0861500 | 0.812059 | 5.129495e-51 | -8.615850e-47 |
| Msa0479330 | Msa0861500 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0482040 | Msa0861500 | 0.848518 | 5.826088e-60 | -8.615850e-47 |
| Msa0240300 | Msa0861500 | 0.806466 | 8.113962e-50 | -8.615850e-47 |
| Msa0244970 | Msa0861500 | 0.808581 | 2.886253e-50 | -8.615850e-47 |
| Msa0244980 | Msa0861500 | 0.819143 | 1.355585e-52 | -8.615850e-47 |
| Msa0257490 | Msa0861500 | 0.827359 | 1.634475e-54 | -8.615850e-47 |
| Msa0269470 | Msa0861500 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
| Msa0271360 | Msa0861500 | 0.802348 | 5.855422e-49 | -8.615850e-47 |
| Msa0275360 | Msa0861500 | 0.808141 | 3.583643e-50 | -8.615850e-47 |
| Msa0281530 | Msa0861500 | 0.822160 | 2.748775e-53 | -8.615850e-47 |
| Msa0283420 | Msa0861500 | 0.807457 | 5.008545e-50 | -8.615850e-47 |
| Msa0285330 | Msa0861500 | 0.808532 | 2.956799e-50 | -8.615850e-47 |
| Msa0296790 | Msa0861500 | 0.853644 | 2.085826e-61 | -8.615850e-47 |
| Msa0296920 | Msa0861500 | 0.806954 | 6.399675e-50 | -8.615850e-47 |
| Msa0308440 | Msa0861500 | 0.803508 | 3.370886e-49 | -8.615850e-47 |
| Msa0311720 | Msa0861500 | 0.822565 | 2.212939e-53 | -8.615850e-47 |
| Msa0311730 | Msa0861500 | 0.806731 | 7.135541e-50 | -8.615850e-47 |
| Msa0321690 | Msa0861500 | 0.812439 | 4.237055e-51 | -8.615850e-47 |
| Msa0324240 | Msa0861500 | 0.820423 | 6.914142e-53 | -8.615850e-47 |
| Msa0339910 | Msa0861500 | 0.844070 | 9.489527e-59 | -8.615850e-47 |
| Msa0343850 | Msa0861500 | 0.825913 | 3.616555e-54 | -8.615850e-47 |
| Msa0358860 | Msa0861500 | 0.811254 | 7.675294e-51 | -8.615850e-47 |
| Msa0484740 | Msa0861500 | 0.816871 | 4.422129e-52 | -8.615850e-47 |
| Msa0491000 | Msa0861500 | 0.820108 | 8.163941e-53 | -8.615850e-47 |
| Msa0515340 | Msa0861500 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa0521010 | Msa0861500 | 0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0542290 | Msa0861500 | 0.833530 | 5.057318e-56 | -8.615850e-47 |
| Msa0542560 | Msa0861500 | 0.834700 | 2.575510e-56 | -8.615850e-47 |
| Msa0549780 | Msa0861500 | 0.803642 | 3.162276e-49 | -8.615850e-47 |
| Msa0555640 | Msa0861500 | 0.820397 | 7.008122e-53 | -8.615850e-47 |
| Msa0566350 | Msa0861500 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
| Msa0566750 | Msa0861500 | 0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0588240 | Msa0861500 | 0.801232 | 9.923057e-49 | -8.615850e-47 |
| Msa0600080 | Msa0861500 | 0.825100 | 5.636158e-54 | -8.615850e-47 |
| Msa0600450 | Msa0861500 | 0.814593 | 1.423776e-51 | -8.615850e-47 |
| Msa0844110 | Msa0861500 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0846230 | Msa0861500 | 0.807010 | 6.229237e-50 | -8.615850e-47 |
| Msa0861470 | Msa0861500 | 0.834801 | 2.429471e-56 | -8.615850e-47 |
| Msa0861500 | Msa0861540 | 0.902296 | 1.120291e-78 | -8.615850e-47 |
| Msa0861500 | Msa0861570 | 0.839536 | 1.493979e-57 | -8.615850e-47 |
| Msa0861500 | Msa0866400 | 0.811221 | 7.804064e-51 | -8.615850e-47 |
| Msa0861500 | Msa0866410 | 0.812350 | 4.430592e-51 | -8.615850e-47 |
| Msa0861500 | Msa0880810 | 0.803333 | 3.664984e-49 | -8.615850e-47 |
| Msa0861500 | Msa0897200 | 0.831433 | 1.674050e-55 | -8.615850e-47 |
| Msa0861500 | Msa0898660 | 0.825730 | 3.996602e-54 | -8.615850e-47 |
| Msa0861500 | Msa0909010 | 0.821432 | 4.051142e-53 | -8.615850e-47 |
| Msa0861500 | Msa0918390 | 0.808143 | 3.580343e-50 | -8.615850e-47 |
| Msa0861500 | Msa0923780 | 0.849050 | 4.146236e-60 | -8.615850e-47 |
| Msa0861500 | Msa0933380 | 0.815521 | 8.858252e-52 | -8.615850e-47 |
| Msa0861500 | Msa0937330 | 0.806346 | 8.600876e-50 | -8.615850e-47 |
| Msa0861500 | Msa0944200 | 0.836025 | 1.191570e-56 | -8.615850e-47 |
| Msa0861500 | Msa0962840 | 0.845248 | 4.572242e-59 | -8.615850e-47 |
| Msa0861500 | Msa0971160 | 0.826506 | 2.613364e-54 | -8.615850e-47 |
| Msa0861500 | Msa0980540 | 0.831732 | 1.413207e-55 | -8.615850e-47 |
| Msa0861500 | Msa0990580 | 0.808654 | 2.785388e-50 | -8.615850e-47 |
| Msa0861500 | Msa0992580 | 0.806204 | 9.216779e-50 | -8.615850e-47 |
| Msa0861500 | Msa0992600 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0861500 | Msa0994370 | 0.808643 | 2.800594e-50 | -8.615850e-47 |
| Msa0861500 | Msa0998590 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa0861500 | Msa1027360 | 0.803070 | 4.154298e-49 | -8.615850e-47 |
| Msa0861500 | Msa1037520 | 0.814139 | 1.793343e-51 | -8.615850e-47 |
| Msa0861500 | Msa1043050 | 0.803032 | 4.229709e-49 | -8.615850e-47 |
| Msa0861500 | Msa1063420 | 0.806503 | 7.969483e-50 | -8.615850e-47 |
| Msa0861500 | Msa1071290 | 0.816485 | 5.398930e-52 | -8.615850e-47 |
| Msa0861500 | Msa1071320 | 0.839844 | 1.242768e-57 | -8.615850e-47 |
| Msa0861500 | Msa1072900 | 0.822294 | 2.557840e-53 | -8.615850e-47 |
| Msa0861500 | Msa1080270 | 0.801133 | 1.039596e-48 | -8.615850e-47 |
| Msa0861500 | Msa1081790 | -0.810779 | 9.726599e-51 | -8.615850e-47 |
| Msa0861500 | Msa1095650 | 0.806177 | 9.336162e-50 | -8.615850e-47 |
| Msa0861500 | Msa1109350 | 0.801322 | 9.510558e-49 | -8.615850e-47 |
| Msa0861500 | Msa1122780 | 0.804166 | 2.461405e-49 | -8.615850e-47 |
| Msa0861500 | Msa1130400 | 0.810321 | 1.221812e-50 | -8.615850e-47 |
| Msa0861500 | Msa1140150 | 0.802023 | 6.827972e-49 | -8.615850e-47 |
| Msa0861500 | Msa1150710 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa0861500 | Msa1163870 | 0.804227 | 2.389668e-49 | -8.615850e-47 |
| Msa0861500 | Msa1166090 | -0.803942 | 2.740363e-49 | -8.615850e-47 |
| Msa0861500 | Msa1174850 | 0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0861500 | Msa1176360 | 0.825421 | 4.730443e-54 | -8.615850e-47 |
| Msa0861500 | Msa1205480 | 0.820650 | 6.133303e-53 | -8.615850e-47 |
| Msa0861500 | Msa1205590 | 0.826810 | 2.211927e-54 | -8.615850e-47 |
| Msa0861500 | Msa1207310 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa0861500 | Msa1208790 | 0.807723 | 4.397017e-50 | -8.615850e-47 |
| Msa0861500 | Msa1209670 | 0.806974 | 6.337171e-50 | -8.615850e-47 |
| Msa0861500 | Msa1211340 | 0.818637 | 1.766762e-52 | -8.615850e-47 |
| Msa0861500 | Msa1211830 | 0.806739 | 7.106930e-50 | -8.615850e-47 |
| Msa0861500 | Msa1218580 | 0.803545 | 3.313006e-49 | -8.615850e-47 |
| Msa0861500 | Msa1256470 | 0.822973 | 1.778165e-53 | -8.615850e-47 |
| Msa0861500 | Msa1259640 | 0.823132 | 1.632912e-53 | -8.615850e-47 |
| Msa0861500 | Msa1271130 | 0.805882 | 1.076833e-49 | -8.615850e-47 |
| Msa0861500 | Msa1272620 | 0.803726 | 3.038304e-49 | -8.615850e-47 |
| Msa0861500 | Msa1278900 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa0861500 | Msa1294820 | 0.804606 | 1.992415e-49 | -8.615850e-47 |
| Msa0861500 | Msa1297530 | 0.813047 | 3.118229e-51 | -8.615850e-47 |
| Msa0861500 | Msa1299700 | 0.807254 | 5.529697e-50 | -8.615850e-47 |
| Msa0861500 | Msa1307180 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0861500 | Msa1316360 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0861500 | Msa1329790 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0861500 | Msa1331350 | 0.803162 | 3.976301e-49 | -8.615850e-47 |
| Msa0861500 | Msa1332220 | 0.801466 | 8.884171e-49 | -8.615850e-47 |
| Msa0861500 | Msa1336040 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa0861500 | Msa1336560 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa0861500 | Msa1337170 | 0.828220 | 1.014463e-54 | -8.615850e-47 |
| Msa0861500 | Msa1357890 | 0.828708 | 7.737955e-55 | -8.615850e-47 |
| Msa0861500 | Msa1359270 | 0.823891 | 1.084885e-53 | -8.615850e-47 |
| Msa0861500 | Msa1362420 | 0.812531 | 4.045481e-51 | -8.615850e-47 |
| Msa0861500 | Msa1365800 | 0.811739 | 6.022778e-51 | -8.615850e-47 |
| Msa0861500 | Msa1368530 | 0.810877 | 9.263045e-51 | -8.615850e-47 |
| Msa0861500 | Msa1371240 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0861500 | Msa1376650 | 0.806769 | 7.003194e-50 | -8.615850e-47 |
| Msa0861500 | Msa1389850 | 0.804389 | 2.211844e-49 | -8.615850e-47 |
| Msa0861500 | Msa1396400 | -0.801948 | 7.076511e-49 | -8.615850e-47 |
| Msa0861500 | Msa1398090 | 0.829486 | 5.010680e-55 | -8.615850e-47 |
| Msa0861500 | Msa1422580 | 0.838092 | 3.531424e-57 | -8.615850e-47 |
| Msa0861500 | Msa1422810 | 0.802771 | 4.788634e-49 | -8.615850e-47 |
| Msa0861500 | Msa1423910 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0861500 | Msa1433600 | 0.820573 | 6.387630e-53 | -8.615850e-47 |
| Msa0861500 | Msa1436600 | 0.800424 | 1.451004e-48 | -8.615850e-47 |
| Msa0861500 | Msa1437330 | 0.812335 | 4.465777e-51 | -8.615850e-47 |
| Msa0861500 | Msa1446080 | 0.820233 | 7.644354e-53 | -8.615850e-47 |
| Msa0861500 | Msa1447890 | 0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa0861500 | Msa1448630 | 0.806389 | 8.425000e-50 | -8.615850e-47 |
| Msa0861500 | Msa1451150 | 0.802573 | 5.262976e-49 | -8.615850e-47 |
| Msa0861500 | Msa1458610 | 0.824032 | 1.005305e-53 | -8.615850e-47 |
| Msa0861500 | Msa1460320 | -0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0861500 | Msa1462290 | 0.834661 | 2.634403e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0861500 | MtrunA17_Chr5g0395271 | 98.137 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 0.0 | 649 |
| Msa0861500 | MtrunA17_Chr3g0126971 | 78.333 | 60 | 13 | 0 | 263 | 322 | 6 | 65 | 8.63e-27 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0861500 | AT1G65020.1 | 64.309 | 311 | 108 | 2 | 1 | 311 | 1 | 308 | 7.50e-144 | 409 |
Find 88 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGAGTTCCTTGAATTTA+AGG | 0.162942 | 5_4:-60849338 | Msa0861500:CDS |
| GTCCAAACATGCTTGTCTTT+TGG | 0.226912 | 5_4:+60849251 | None:intergenic |
| CCATACTTAACACACTGATT+TGG | 0.247864 | 5_4:-60852975 | Msa0861500:five_prime_UTR |
| TCCTTAGCACAGCTCCGATA+TGG | 0.248467 | 5_4:-60850802 | Msa0861500:CDS |
| TTACACGATCATACTATAAT+AGG | 0.251088 | 5_4:-60848368 | Msa0861500:three_prime_UTR |
| TACTTCCAAATCCTAAATTA+TGG | 0.275004 | 5_4:-60851436 | Msa0861500:intron |
| AAGTACTGAGATCATCTTTC+AGG | 0.289690 | 5_4:-60848590 | Msa0861500:CDS |
| ACATACCATAATTTAGGATT+TGG | 0.298779 | 5_4:+60851431 | None:intergenic |
| CCAAATCAGTGTGTTAAGTA+TGG | 0.301994 | 5_4:+60852975 | None:intergenic |
| CATACTTAACACACTGATTT+GGG | 0.302393 | 5_4:-60852974 | Msa0861500:five_prime_UTR |
| GAAGTATAACTTTACAAGTT+AGG | 0.321243 | 5_4:+60851453 | None:intergenic |
| GGTTTGGTTGGTTGGTTGGT+TGG | 0.329327 | 5_4:-60852953 | Msa0861500:five_prime_UTR |
| CTCTGGTGCTGATGCTCCCT+TGG | 0.331844 | 5_4:+60848636 | None:intergenic |
| AAAGCAGCTATAAGTCTTGC+TGG | 0.347631 | 5_4:-60848322 | Msa0861500:three_prime_UTR |
| GAGAGCACACTCTTTGTTCC+GGG | 0.351339 | 5_4:+60850899 | None:intergenic |
| TTACAAGTTAGGAATCCTTT+AGG | 0.352898 | 5_4:+60851464 | None:intergenic |
| TAGAGTCATTATCAGTTATC+AGG | 0.352933 | 5_4:+60848278 | None:intergenic |
| TTCTCTTCTCCGTAGCTAAC+AGG | 0.353170 | 5_4:-60852776 | Msa0861500:intron |
| ATCCAAAAGACAAGCATGTT+TGG | 0.358398 | 5_4:-60849253 | Msa0861500:CDS |
| TTTGGGTTTGGTTGGTTGGT+TGG | 0.360382 | 5_4:-60852957 | Msa0861500:five_prime_UTR |
| AGAGAGCACACTCTTTGTTC+CGG | 0.360940 | 5_4:+60850898 | None:intergenic |
| CCTCCTTGCCCTTAAATTCA+AGG | 0.368520 | 5_4:+60849329 | None:intergenic |
| AAGAGGTTCCTTACAGGATC+AGG | 0.374138 | 5_4:+60851805 | None:intergenic |
| GGAGAGTTCCTTGAATTTAA+GGG | 0.377759 | 5_4:-60849337 | Msa0861500:CDS |
| CTGATTTGGGTTTGGTTGGT+TGG | 0.380300 | 5_4:-60852961 | Msa0861500:five_prime_UTR |
| TCAGTTGCACCAACTGTTCA+TGG | 0.383310 | 5_4:+60850924 | None:intergenic |
| TTAACACACTGATTTGGGTT+TGG | 0.397142 | 5_4:-60852969 | Msa0861500:five_prime_UTR |
| CAAAGAGTGTGCTCTCTAGC+TGG | 0.413619 | 5_4:-60850892 | Msa0861500:CDS |
| AAAGGCAGCAAGTATGTATT+GGG | 0.428495 | 5_4:-60849358 | Msa0861500:CDS |
| GTAAAGAATACCTTTCTTAG+TGG | 0.432856 | 5_4:-60850869 | Msa0861500:CDS |
| CACACTGATTTGGGTTTGGT+TGG | 0.436509 | 5_4:-60852965 | Msa0861500:five_prime_UTR |
| GAAAGGCAGCAAGTATGTAT+TGG | 0.437053 | 5_4:-60849359 | Msa0861500:CDS |
| TGGTTGGTTGGTTGGTTGCA+AGG | 0.441495 | 5_4:-60852945 | Msa0861500:five_prime_UTR |
| CAGAGAGCTACTAGTGATAT+CGG | 0.442531 | 5_4:-60851914 | Msa0861500:CDS |
| CAGTTCAAGGGGATGGTAGT+TGG | 0.442677 | 5_4:-60851867 | Msa0861500:CDS |
| ATCTTGTTCTCCTCACTAAA+CGG | 0.444438 | 5_4:-60852534 | Msa0861500:intron |
| TACAAAACTTGAAGCGTAGA+AGG | 0.445109 | 5_4:+60848679 | None:intergenic |
| AGTTCAAGGGGATGGTAGTT+GGG | 0.450991 | 5_4:-60851866 | Msa0861500:CDS |
| AGAGGAGTTGTTCTACCTAA+AGG | 0.458571 | 5_4:-60851479 | Msa0861500:CDS |
| CCTTAGCACAGCTCCGATAT+GGG | 0.458981 | 5_4:-60850801 | Msa0861500:CDS |
| AACTCCTCTTTGTTCAAGAT+AGG | 0.470713 | 5_4:+60851493 | None:intergenic |
| TGAATTTAAGGGCAAGGAGG+GGG | 0.482520 | 5_4:-60849326 | Msa0861500:CDS |
| TAAGTATGGAATGGAATGTA+AGG | 0.488029 | 5_4:+60852989 | None:intergenic |
| ATCATTCTTCCCACTAAGAA+AGG | 0.488207 | 5_4:+60850859 | None:intergenic |
| CTTGAATTTAAGGGCAAGGA+GGG | 0.496833 | 5_4:-60849328 | Msa0861500:CDS |
| GTAACTAACCTATCCCATAT+CGG | 0.509751 | 5_4:+60850788 | None:intergenic |
| AGTGAGGAGAACAAGATCAA+TGG | 0.509852 | 5_4:+60852540 | None:intergenic |
| TCATGGGTAATAACTTCAGA+TGG | 0.517850 | 5_4:+60850941 | None:intergenic |
| TAAAGAATACCTTTCTTAGT+GGG | 0.519984 | 5_4:-60850868 | Msa0861500:CDS |
| GATATCGGTGAAGAACTTCT+CGG | 0.527229 | 5_4:-60851899 | Msa0861500:CDS |
| TTGAATTTAAGGGCAAGGAG+GGG | 0.528134 | 5_4:-60849327 | Msa0861500:CDS |
| CTCCCTTGGTTCTGTAGTCA+CGG | 0.532065 | 5_4:+60848650 | None:intergenic |
| GTTCCTTGAATTTAAGGGCA+AGG | 0.535185 | 5_4:-60849332 | Msa0861500:CDS |
| GGTGAAGCAGAATCAGCATC+AGG | 0.535980 | 5_4:+60852568 | None:intergenic |
| GTTGGAAGAAGTAAGAAAGC+AGG | 0.540992 | 5_4:-60851531 | Msa0861500:CDS |
| ACGGTCACTTCGTTCCACTC+TGG | 0.541796 | 5_4:+60848619 | None:intergenic |
| TGGGAAATCACTAGCAGGAA+TGG | 0.544917 | 5_4:+60850961 | None:intergenic |
| CATATTAGAAGATCAAAAGT+TGG | 0.546113 | 5_4:-60849286 | Msa0861500:CDS |
| ATATCGGTGAAGAACTTCTC+GGG | 0.548520 | 5_4:-60851898 | Msa0861500:CDS |
| AAGACAAGCATGTTTGGACT+AGG | 0.550639 | 5_4:-60849247 | Msa0861500:intron |
| CAGTTGGTGCAACTGAAGCC+CGG | 0.558138 | 5_4:-60850917 | Msa0861500:CDS |
| ATTTGCAAGATTTGAAGATG+TGG | 0.558251 | 5_4:-60852893 | Msa0861500:exon |
| CAGTTGCACCAACTGTTCAT+GGG | 0.560744 | 5_4:+60850925 | None:intergenic |
| AAAGAGTGTGCTCTCTAGCT+GGG | 0.564254 | 5_4:-60850891 | Msa0861500:CDS |
| TCAGTGTGTTAAGTATGGAA+TGG | 0.568214 | 5_4:+60852980 | None:intergenic |
| CCCATATCGGAGCTGTGCTA+AGG | 0.568778 | 5_4:+60850801 | None:intergenic |
| ATCAAACCACAGATAATCGC+AGG | 0.569955 | 5_4:+60852870 | None:intergenic |
| AAAATAGAACCTGTTAGCTA+CGG | 0.572491 | 5_4:+60852767 | None:intergenic |
| TCAGATGGGAAATCACTAGC+AGG | 0.572671 | 5_4:+60850956 | None:intergenic |
| ACATACAAAATACTATTATG+TGG | 0.573344 | 5_4:-60848443 | Msa0861500:three_prime_UTR |
| AGTTGGGCCTGTGAAAAGCC+AGG | 0.575563 | 5_4:-60851850 | Msa0861500:CDS |
| AGAGGTTCCTTACAGGATCA+GGG | 0.579456 | 5_4:+60851806 | None:intergenic |
| AGAACAAGATCAATGGTTTG+TGG | 0.580661 | 5_4:+60852547 | None:intergenic |
| CCTTGAATTTAAGGGCAAGG+AGG | 0.585033 | 5_4:-60849329 | Msa0861500:CDS |
| GCACAGCTCCGATATGGGAT+AGG | 0.585641 | 5_4:-60850796 | Msa0861500:intron |
| AGTTATTACCCATGAACAGT+TGG | 0.586406 | 5_4:-60850933 | Msa0861500:CDS |
| TCCTTACAGGATCAGGGTGA+CGG | 0.588996 | 5_4:+60851812 | None:intergenic |
| GCTTGCAGGTTGGAACTGAA+AGG | 0.595661 | 5_4:-60849376 | Msa0861500:intron |
| CATGGGTAATAACTTCAGAT+GGG | 0.605648 | 5_4:+60850942 | None:intergenic |
| TTCCGTGACTACAGAACCAA+GGG | 0.621677 | 5_4:-60848652 | Msa0861500:CDS |
| ATGTGGCCTGCGATTATCTG+TGG | 0.622381 | 5_4:-60852876 | Msa0861500:CDS |
| TTTGTTCAAGATAGGACTCG+AGG | 0.627057 | 5_4:+60851501 | None:intergenic |
| ATAACTGATAATGACTCTAG+TGG | 0.646482 | 5_4:-60848274 | Msa0861500:three_prime_UTR |
| GAGTCCTATCTTGAACAAAG+AGG | 0.656933 | 5_4:-60851497 | Msa0861500:CDS |
| AGTCATTATCAGTTATCAGG+TGG | 0.661246 | 5_4:+60848281 | None:intergenic |
| TTTCCGTGACTACAGAACCA+AGG | 0.679639 | 5_4:-60848653 | Msa0861500:CDS |
| AGGGAGCATCAGCACCAGAG+TGG | 0.687214 | 5_4:-60848633 | Msa0861500:CDS |
| AGCTACGGAGAAGAGAACAG+TGG | 0.755552 | 5_4:+60852782 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTAAAAAAAAAAAA+AGG | + | chr5_4:60849280-60849299 | None:intergenic | 0.0% |
| !! | CTATAATAACAAAATTTAAT+GGG | - | chr5_4:60852054-60852073 | Msa0861500:intron | 10.0% |
| !! | AAAATAATTGAAATCATGAA+AGG | + | chr5_4:60848511-60848530 | None:intergenic | 15.0% |
| !! | ATTGCATTCAAATTATAATA+AGG | - | chr5_4:60848929-60848948 | Msa0861500:intron | 15.0% |
| !! | TTGCATTCAAATTATAATAA+GGG | - | chr5_4:60848930-60848949 | Msa0861500:intron | 15.0% |
| !!! | GATGGTTTTTTTTTTTTTTT+GGG | - | chr5_4:60849498-60849517 | Msa0861500:intron | 15.0% |
| !!! | ATGGTTTTTTTTTTTTTTTG+GGG | - | chr5_4:60849499-60849518 | Msa0861500:intron | 15.0% |
| !!! | ACTTTAAAATTTTCCAAATT+TGG | - | chr5_4:60849936-60849955 | Msa0861500:intron | 15.0% |
| !! | AAGAACTAATTAAAAAAGAA+TGG | + | chr5_4:60849999-60850018 | None:intergenic | 15.0% |
| !!! | ATTCTTTTTTAATTAGTTCT+TGG | - | chr5_4:60849998-60850017 | Msa0861500:intron | 15.0% |
| !! | AAATAATATTGATGTTTCAT+TGG | + | chr5_4:60851247-60851266 | None:intergenic | 15.0% |
| !! | TAAATAGTTAAGTGTATAAT+AGG | + | chr5_4:60851272-60851291 | None:intergenic | 15.0% |
| !!! | TTTTCAATAACATTAATGAA+GGG | - | chr5_4:60851325-60851344 | Msa0861500:intron | 15.0% |
| !!! | ATAACTCAATTCTTTAATTT+CGG | - | chr5_4:60851360-60851379 | Msa0861500:intron | 15.0% |
| !!! | TATTTAATATGACCAAATTT+TGG | - | chr5_4:60851807-60851826 | Msa0861500:intron | 15.0% |
| !! | GCTATAATAACAAAATTTAA+TGG | - | chr5_4:60852053-60852072 | Msa0861500:intron | 15.0% |
| !! | AGTATTAAATAAAACATTGA+GGG | + | chr5_4:60852139-60852158 | None:intergenic | 15.0% |
| !! | TAGTATTAAATAAAACATTG+AGG | + | chr5_4:60852140-60852159 | None:intergenic | 15.0% |
| !! | GTTAAATTGAATTGAATTGA+AGG | - | chr5_4:60848540-60848559 | Msa0861500:CDS | 20.0% |
| !!! | AAAAATAATACCTTTTAGTG+AGG | + | chr5_4:60848852-60848871 | None:intergenic | 20.0% |
| !!! | TTTTTTTACTCTTCTGATTA+GGG | - | chr5_4:60849193-60849212 | Msa0861500:intron | 20.0% |
| !! | GTTAATGAATGATAAATTTG+TGG | - | chr5_4:60849250-60849269 | Msa0861500:CDS | 20.0% |
| !! | ACATTCATAATTTATTCAAG+AGG | + | chr5_4:60849446-60849465 | None:intergenic | 20.0% |
| !!! | CGATGGTTTTTTTTTTTTTT+TGG | - | chr5_4:60849497-60849516 | Msa0861500:intron | 20.0% |
| !!! | TGTTTGTTAAATCATATGAA+CGG | - | chr5_4:60849559-60849578 | Msa0861500:intron | 20.0% |
| !! | TATGAAAGAAGTTACTAATT+TGG | + | chr5_4:60849656-60849675 | None:intergenic | 20.0% |
| !! | TCAAAAACATACCATAATTT+AGG | + | chr5_4:60849809-60849828 | None:intergenic | 20.0% |
| !!! | AATGGATTATACATATGAAT+AGG | + | chr5_4:60849981-60850000 | None:intergenic | 20.0% |
| !! | ATTACTGTCTAAACTATAAT+TGG | - | chr5_4:60850038-60850057 | Msa0861500:intron | 20.0% |
| !!! | GAATTGTGTTGTTAATAAAT+TGG | - | chr5_4:60850060-60850079 | Msa0861500:intron | 20.0% |
| !!! | TTATGATGTAAAAAAAGCAT+TGG | - | chr5_4:60850135-60850154 | Msa0861500:intron | 20.0% |
| !! | ATTAGAAAGATAAGAACAAA+TGG | + | chr5_4:60850468-60850487 | None:intergenic | 20.0% |
| !! | ATCTTATTCAAACATAGATT+AGG | + | chr5_4:60850825-60850844 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTTTCATATTGT+TGG | - | chr5_4:60851061-60851080 | Msa0861500:intron | 20.0% |
| !! | TTTAACCAACAATATGAAAA+AGG | + | chr5_4:60851069-60851088 | None:intergenic | 20.0% |
| !!! | TTTTTCATATTGTTGGTTAA+AGG | - | chr5_4:60851068-60851087 | Msa0861500:intron | 20.0% |
| !!! | TTTTCATATTGTTGGTTAAA+GGG | - | chr5_4:60851069-60851088 | Msa0861500:intron | 20.0% |
| !!! | TAGTACTATTGATTACTAAA+AGG | - | chr5_4:60851143-60851162 | Msa0861500:intron | 20.0% |
| !!! | GTTTTCAATAACATTAATGA+AGG | - | chr5_4:60851324-60851343 | Msa0861500:intron | 20.0% |
| !! | TCTATTATATAACTTAGAGA+AGG | + | chr5_4:60852321-60852340 | None:intergenic | 20.0% |
| !!! | ATAATAGTATTTTGTATGTC+TGG | + | chr5_4:60852787-60852806 | None:intergenic | 20.0% |
| !! | ACATACAAAATACTATTATG+TGG | - | chr5_4:60852788-60852807 | Msa0861500:CDS | 20.0% |
| ! | TTGCAAATGAAATGCAAAAA+TGG | + | chr5_4:60848326-60848345 | None:intergenic | 25.0% |
| !!! | CATTTTTCTTTTTTTGTTGC+AGG | - | chr5_4:60848595-60848614 | Msa0861500:CDS | 25.0% |
| ! | AAAAATAATACCGTTTAGTG+AGG | + | chr5_4:60848710-60848729 | None:intergenic | 25.0% |
| ! | ACTAACAAAAAAGAGAAACA+TGG | + | chr5_4:60849068-60849087 | None:intergenic | 25.0% |
| !!! | GTTTCTCTTTTTTGTTAGTT+CGG | - | chr5_4:60849069-60849088 | Msa0861500:intron | 25.0% |
| !! | ATTTTGTAAAAGCTACACTT+TGG | + | chr5_4:60849123-60849142 | None:intergenic | 25.0% |
| !!! | GTTTTTTTACTCTTCTGATT+AGG | - | chr5_4:60849192-60849211 | Msa0861500:intron | 25.0% |
| !!! | TTTTTTACTCTTCTGATTAG+GGG | - | chr5_4:60849194-60849213 | Msa0861500:intron | 25.0% |
| !!! | TAGATTTTAGAAACTGCTTT+TGG | - | chr5_4:60849535-60849554 | Msa0861500:intron | 25.0% |
| !!! | TTTGTTCCTATTTTGTTATG+AGG | - | chr5_4:60849597-60849616 | Msa0861500:intron | 25.0% |
| ! | GAAGTATAACTTTACAAGTT+AGG | + | chr5_4:60849781-60849800 | None:intergenic | 25.0% |
| ! | TACTTCCAAATCCTAAATTA+TGG | - | chr5_4:60849795-60849814 | Msa0861500:intron | 25.0% |
| !! | ACATACCATAATTTAGGATT+TGG | + | chr5_4:60849803-60849822 | None:intergenic | 25.0% |
| ! | AAAATAATCAAACCGTGTAT+TGG | + | chr5_4:60849909-60849928 | None:intergenic | 25.0% |
| ! | TAAAGAATACCTTTCTTAGT+GGG | - | chr5_4:60850363-60850382 | Msa0861500:intron | 25.0% |
| ! | AAACTTTCTGCAATCATATT+TGG | - | chr5_4:60850505-60850524 | Msa0861500:intron | 25.0% |
| ! | TTGTATTTAGATGCTGTTAA+TGG | - | chr5_4:60850534-60850553 | Msa0861500:intron | 25.0% |
| ! | ATCAATCCATTTCTGAATAT+TGG | - | chr5_4:60850593-60850612 | Msa0861500:intron | 25.0% |
| !! | ATCTATATTTGAGACAGAAT+TGG | + | chr5_4:60850702-60850721 | None:intergenic | 25.0% |
| !! | AACATTTGAGATGCATTATA+GGG | + | chr5_4:60850745-60850764 | None:intergenic | 25.0% |
| !! | AAACATTTGAGATGCATTAT+AGG | + | chr5_4:60850746-60850765 | None:intergenic | 25.0% |
| ! | GATTAGGAATACTAGTAATT+AGG | + | chr5_4:60850809-60850828 | None:intergenic | 25.0% |
| !!! | AGGTATTTAACTTGAGATTA+GGG | + | chr5_4:60850908-60850927 | None:intergenic | 25.0% |
| !!! | TAGGTATTTAACTTGAGATT+AGG | + | chr5_4:60850909-60850928 | None:intergenic | 25.0% |
| !! | TCTAGTTTCATTGTTTATCT+AGG | + | chr5_4:60850928-60850947 | None:intergenic | 25.0% |
| !! | AAAAAGTACGATTTGTGTAT+TGG | + | chr5_4:60850955-60850974 | None:intergenic | 25.0% |
| !!! | ACACAAATCGTACTTTTTAT+TGG | - | chr5_4:60850957-60850976 | Msa0861500:CDS | 25.0% |
| !!! | CACAAATCGTACTTTTTATT+GGG | - | chr5_4:60850958-60850977 | Msa0861500:CDS | 25.0% |
| !!! | ACAAATCGTACTTTTTATTG+GGG | - | chr5_4:60850959-60850978 | Msa0861500:CDS | 25.0% |
| !! | TTTCATATTGTTGGTTAAAG+GGG | - | chr5_4:60851070-60851089 | Msa0861500:intron | 25.0% |
| ! | ATTACATAGCAAATGTTGAT+AGG | - | chr5_4:60851093-60851112 | Msa0861500:intron | 25.0% |
| ! | CTCAAAGCAACTTAAAATTT+GGG | + | chr5_4:60851184-60851203 | None:intergenic | 25.0% |
| ! | TCTCAAAGCAACTTAAAATT+TGG | + | chr5_4:60851185-60851204 | None:intergenic | 25.0% |
| ! | TGTAAAGTGACTTACAATTT+GGG | + | chr5_4:60851221-60851240 | None:intergenic | 25.0% |
| ! | TTGTAAAGTGACTTACAATT+TGG | + | chr5_4:60851222-60851241 | None:intergenic | 25.0% |
| ! | ATTTCTTAATCTGTGTGAAA+TGG | - | chr5_4:60851398-60851417 | Msa0861500:intron | 25.0% |
| !! | AAATTAAGAATTGCTCTAAG+AGG | + | chr5_4:60851507-60851526 | None:intergenic | 25.0% |
| !! | TGCTTAGATATTTTCCTATT+TGG | - | chr5_4:60851712-60851731 | Msa0861500:intron | 25.0% |
| !! | GCTTAGATATTTTCCTATTT+GGG | - | chr5_4:60851713-60851732 | Msa0861500:intron | 25.0% |
| ! | GTGAGTAAAAAACCAAAATT+TGG | + | chr5_4:60851822-60851841 | None:intergenic | 25.0% |
| ! | CATATTAGAAGATCAAAAGT+TGG | - | chr5_4:60851945-60851964 | Msa0861500:intron | 25.0% |
| ! | TTGAAGTTGAAACAAAGATT+TGG | - | chr5_4:60852091-60852110 | Msa0861500:intron | 25.0% |
| ! | AATATCTGTTGTAACCAAAA+TGG | + | chr5_4:60852215-60852234 | None:intergenic | 25.0% |
| !! | ATTTTATAGAAAAGAGTCAC+AGG | + | chr5_4:60852417-60852436 | None:intergenic | 25.0% |
| ! | TTAGACAATAATAACATTGC+TGG | + | chr5_4:60852490-60852509 | None:intergenic | 25.0% |
| ! | TGATGTTTCTTTAACTAACA+TGG | - | chr5_4:60852515-60852534 | Msa0861500:intron | 25.0% |
| ! | GATGTTTCTTTAACTAACAT+GGG | - | chr5_4:60852516-60852535 | Msa0861500:intron | 25.0% |
| !! | TATTTTGTATGTCTGGAAAA+GGG | + | chr5_4:60852780-60852799 | None:intergenic | 25.0% |
| ! | TTACACGATCATACTATAAT+AGG | - | chr5_4:60852863-60852882 | Msa0861500:CDS | 25.0% |
| !!! | TAGTTTTTTGTTTCAACTCT+TGG | - | chr5_4:60852997-60853016 | Msa0861500:five_prime_UTR | 25.0% |
| TAAGTATGGAATGGAATGTA+AGG | + | chr5_4:60848245-60848264 | None:intergenic | 30.0% | |
| !! | CATACTTAACACACTGATTT+GGG | - | chr5_4:60848257-60848276 | Msa0861500:three_prime_UTR | 30.0% |
| ATTTGCAAGATTTGAAGATG+TGG | - | chr5_4:60848338-60848357 | Msa0861500:three_prime_UTR | 30.0% | |
| AAAATAGAACCTGTTAGCTA+CGG | + | chr5_4:60848467-60848486 | None:intergenic | 30.0% | |
| GAAAGGATTCAATTCAACAA+CGG | + | chr5_4:60848494-60848513 | None:intergenic | 30.0% | |
| !!! | TCCAGTGTTTTTTGAGATTA+AGG | - | chr5_4:60848974-60848993 | Msa0861500:intron | 30.0% |
| ACCTTAATCTCAAAAAACAC+TGG | + | chr5_4:60848978-60848997 | None:intergenic | 30.0% | |
| ! | GTGTAGCTTTTACAAAATCA+TGG | - | chr5_4:60849125-60849144 | Msa0861500:intron | 30.0% |
| TTAACTAGCAATTGTAACTG+AGG | + | chr5_4:60849235-60849254 | None:intergenic | 30.0% | |
| ATACAGCCTCATAACAAAAT+AGG | + | chr5_4:60849606-60849625 | None:intergenic | 30.0% | |
| !! | TTTTGTTATGAGGCTGTATT+AGG | - | chr5_4:60849607-60849626 | Msa0861500:intron | 30.0% |
| TTTCTCAACTTGTATACAGT+TGG | - | chr5_4:60849682-60849701 | Msa0861500:intron | 30.0% | |
| TTACAAGTTAGGAATCCTTT+AGG | + | chr5_4:60849770-60849789 | None:intergenic | 30.0% | |
| CAGCAAGTACTTATATTTCA+AGG | + | chr5_4:60849836-60849855 | None:intergenic | 30.0% | |
| ! | ATTCATGATTTGCCAATACA+CGG | - | chr5_4:60849894-60849913 | Msa0861500:intron | 30.0% |
| ! | TTCCAAATTTGGCTTCATAT+AGG | - | chr5_4:60849947-60849966 | Msa0861500:intron | 30.0% |
| TCATAAATACTGCTTGTCAA+TGG | + | chr5_4:60850121-60850140 | None:intergenic | 30.0% | |
| ! | TTACTCAGTTTTCTTTTGAC+TGG | + | chr5_4:60850175-60850194 | None:intergenic | 30.0% |
| GTAAAGAATACCTTTCTTAG+TGG | - | chr5_4:60850362-60850381 | Msa0861500:intron | 30.0% | |
| ATCCATTTCTGAATATTGGT+AGG | - | chr5_4:60850597-60850616 | Msa0861500:intron | 30.0% | |
| ATCCTACCAATATTCAGAAA+TGG | + | chr5_4:60850602-60850621 | None:intergenic | 30.0% | |
| TTCTGAATATTGGTAGGATA+AGG | - | chr5_4:60850603-60850622 | Msa0861500:intron | 30.0% | |
| TACAATCTCAGAACTCTATT+TGG | - | chr5_4:60850640-60850659 | Msa0861500:intron | 30.0% | |
| ! | TATATTTGAGACAGAATTGG+AGG | + | chr5_4:60850699-60850718 | None:intergenic | 30.0% |
| ! | TTATAGGGTTTTCATTCAGT+CGG | + | chr5_4:60850730-60850749 | None:intergenic | 30.0% |
| ATACTAGTAATTAGGATGTC+TGG | + | chr5_4:60850801-60850820 | None:intergenic | 30.0% | |
| ! | TTTTTATTGGGGAAATACCT+TGG | - | chr5_4:60850970-60850989 | Msa0861500:intron | 30.0% |
| ! | AACTTAAAATTTGGGATGGA+GGG | + | chr5_4:60851176-60851195 | None:intergenic | 30.0% |
| AAGCAACTTAAAATTTGGGA+TGG | + | chr5_4:60851180-60851199 | None:intergenic | 30.0% | |
| ! | GGTCAAAATGACTTGTAATT+CGG | - | chr5_4:60851419-60851438 | Msa0861500:intron | 30.0% |
| ! | GTCAAAATGACTTGTAATTC+GGG | - | chr5_4:60851420-60851439 | Msa0861500:intron | 30.0% |
| TTTACTCACAACAGATTGTT+TGG | - | chr5_4:60851833-60851852 | Msa0861500:CDS | 30.0% | |
| ! | TGGTTTTTGCCACTAATTAA+GGG | + | chr5_4:60852172-60852191 | None:intergenic | 30.0% |
| ! | ATGGTTTTTGCCACTAATTA+AGG | + | chr5_4:60852173-60852192 | None:intergenic | 30.0% |
| ATCAAGATCTGATTAGACTA+TGG | + | chr5_4:60852192-60852211 | None:intergenic | 30.0% | |
| ! | AATCAGATCTTGATCCATTT+TGG | - | chr5_4:60852198-60852217 | Msa0861500:intron | 30.0% |
| AATGTTCTGATTCTTGATCT+TGG | + | chr5_4:60852348-60852367 | None:intergenic | 30.0% | |
| AGAATCAGAACATTCAACAT+TGG | - | chr5_4:60852354-60852373 | Msa0861500:intron | 30.0% | |
| CATAAGACAGAGGTAATTAT+CGG | + | chr5_4:60852451-60852470 | None:intergenic | 30.0% | |
| ! | GATCTCAGTACTTGATTTTA+CGG | + | chr5_4:60852634-60852653 | None:intergenic | 30.0% |
| ! | CAGCTTAAACTTTTTGATCT+TGG | + | chr5_4:60852679-60852698 | None:intergenic | 30.0% |
| ! | GTATTTTGTATGTCTGGAAA+AGG | + | chr5_4:60852781-60852800 | None:intergenic | 30.0% |
| TAGAGTCATTATCAGTTATC+AGG | + | chr5_4:60852956-60852975 | None:intergenic | 30.0% | |
| ! | ATAACTGATAATGACTCTAG+TGG | - | chr5_4:60852957-60852976 | Msa0861500:five_prime_UTR | 30.0% |
| TCAGTGTGTTAAGTATGGAA+TGG | + | chr5_4:60848254-60848273 | None:intergenic | 35.0% | |
| CCAAATCAGTGTGTTAAGTA+TGG | + | chr5_4:60848259-60848278 | None:intergenic | 35.0% | |
| ! | CCATACTTAACACACTGATT+TGG | - | chr5_4:60848256-60848275 | Msa0861500:three_prime_UTR | 35.0% |
| !! | TTAACACACTGATTTGGGTT+TGG | - | chr5_4:60848262-60848281 | Msa0861500:three_prime_UTR | 35.0% |
| ! | TTTTTACGACAACGACGTTT+TGG | - | chr5_4:60848408-60848427 | Msa0861500:three_prime_UTR | 35.0% |
| ! | TTTTGGTGGAAAGGTTTTTG+TGG | - | chr5_4:60848629-60848648 | Msa0861500:CDS | 35.0% |
| ! | TTTGGTGGAAAGGTTTTTGT+GGG | - | chr5_4:60848630-60848649 | Msa0861500:CDS | 35.0% |
| AGAACAAGATCAATGGTTTG+TGG | + | chr5_4:60848687-60848706 | None:intergenic | 35.0% | |
| ATCTTGTTCTCCTCACTAAA+CGG | - | chr5_4:60848697-60848716 | Msa0861500:intron | 35.0% | |
| TTATCTCTTTCCAACACTTC+TGG | - | chr5_4:60848871-60848890 | Msa0861500:intron | 35.0% | |
| TACATGTGTCTAGACACTAA+CGG | + | chr5_4:60848909-60848928 | None:intergenic | 35.0% | |
| TAGCAATTGTAACTGAGGAT+TGG | + | chr5_4:60849230-60849249 | None:intergenic | 35.0% | |
| TTATTCAAGAGGTTCCTTAC+AGG | + | chr5_4:60849435-60849454 | None:intergenic | 35.0% | |
| !! | ATACTGTTTTATTGCTGCGA+TGG | - | chr5_4:60849480-60849499 | Msa0861500:intron | 35.0% |
| TATTAGGTGTGGAAGGAAAT+GGG | - | chr5_4:60849623-60849642 | Msa0861500:intron | 35.0% | |
| AACTCCTCTTTGTTCAAGAT+AGG | + | chr5_4:60849741-60849760 | None:intergenic | 35.0% | |
| GACCTATATGAAGCCAAATT+TGG | + | chr5_4:60849952-60849971 | None:intergenic | 35.0% | |
| !! | AAAAAAAGCATTGGTCCATC+TGG | - | chr5_4:60850144-60850163 | Msa0861500:intron | 35.0% |
| !! | TTTTGACTGGATAAACCAGA+TGG | + | chr5_4:60850162-60850181 | None:intergenic | 35.0% |
| CATGGGTAATAACTTCAGAT+GGG | + | chr5_4:60850292-60850311 | None:intergenic | 35.0% | |
| TCATGGGTAATAACTTCAGA+TGG | + | chr5_4:60850293-60850312 | None:intergenic | 35.0% | |
| AGTTATTACCCATGAACAGT+TGG | - | chr5_4:60850298-60850317 | Msa0861500:intron | 35.0% | |
| ATCATTCTTCCCACTAAGAA+AGG | + | chr5_4:60850375-60850394 | None:intergenic | 35.0% | |
| GTAACTAACCTATCCCATAT+CGG | + | chr5_4:60850446-60850465 | None:intergenic | 35.0% | |
| ! | CTTGACAACACTTTTGCTTA+GGG | - | chr5_4:60850560-60850579 | Msa0861500:intron | 35.0% |
| ! | TTGACAACACTTTTGCTTAG+GGG | - | chr5_4:60850561-60850580 | Msa0861500:intron | 35.0% |
| ! | AACTTGAGATTAGGGTTTTC+TGG | + | chr5_4:60850900-60850919 | None:intergenic | 35.0% |
| ! | CTTGGCAAAAGGAACATTTT+GGG | - | chr5_4:60850988-60851007 | Msa0861500:intron | 35.0% |
| ! | TTGGCAAAAGGAACATTTTG+GGG | - | chr5_4:60850989-60851008 | Msa0861500:intron | 35.0% |
| ! | CAACTTAAAATTTGGGATGG+AGG | + | chr5_4:60851177-60851196 | None:intergenic | 35.0% |
| !! | AAGAATTGCTCTAAGAGGTT+GGG | + | chr5_4:60851502-60851521 | None:intergenic | 35.0% |
| !! | TAAGAATTGCTCTAAGAGGT+TGG | + | chr5_4:60851503-60851522 | None:intergenic | 35.0% |
| GCGACACATTCTGTTATAAA+AGG | + | chr5_4:60851592-60851611 | None:intergenic | 35.0% | |
| AACATTGCACCCTACATAAT+AGG | - | chr5_4:60851679-60851698 | Msa0861500:intron | 35.0% | |
| ACTTTGGATCAGTGTACTAT+CGG | - | chr5_4:60851770-60851789 | Msa0861500:intron | 35.0% | |
| GTGTACTATCGGATAATTGT+TGG | - | chr5_4:60851781-60851800 | Msa0861500:intron | 35.0% | |
| AAAGGCAGCAAGTATGTATT+GGG | - | chr5_4:60851873-60851892 | Msa0861500:CDS | 35.0% | |
| GGAGAGTTCCTTGAATTTAA+GGG | - | chr5_4:60851894-60851913 | Msa0861500:CDS | 35.0% | |
| ATCCAAAAGACAAGCATGTT+TGG | - | chr5_4:60851978-60851997 | Msa0861500:intron | 35.0% | |
| CAACCAAATCCCTTAATTAG+TGG | - | chr5_4:60852160-60852179 | Msa0861500:intron | 35.0% | |
| TTGCCACTAATTAAGGGATT+TGG | + | chr5_4:60852166-60852185 | None:intergenic | 35.0% | |
| !! | AACATTCAACATTGGCTCTA+CGG | - | chr5_4:60852362-60852381 | Msa0861500:intron | 35.0% |
| CGATAATTACCTCTGTCTTA+TGG | - | chr5_4:60852449-60852468 | Msa0861500:intron | 35.0% | |
| TACAAAACTTGAAGCGTAGA+AGG | + | chr5_4:60852555-60852574 | None:intergenic | 35.0% | |
| !! | AAGTACTGAGATCATCTTTC+AGG | - | chr5_4:60852641-60852660 | Msa0861500:intron | 35.0% |
| AGTCATTATCAGTTATCAGG+TGG | + | chr5_4:60852953-60852972 | None:intergenic | 35.0% | |
| ATCAAACCACAGATAATCGC+AGG | + | chr5_4:60848364-60848383 | None:intergenic | 40.0% | |
| !! | TCAGAAGCTTTTTGGTGGAA+AGG | - | chr5_4:60848620-60848639 | Msa0861500:CDS | 40.0% |
| AGTGAGGAGAACAAGATCAA+TGG | + | chr5_4:60848694-60848713 | None:intergenic | 40.0% | |
| ! | CCTTTTAGTGAGGAGAACAT+CGG | + | chr5_4:60848842-60848861 | None:intergenic | 40.0% |
| TTTCCAACACTTCTGGTAGA+AGG | - | chr5_4:60848878-60848897 | Msa0861500:intron | 40.0% | |
| CAGAGAGCTACTAGTGATAT+CGG | - | chr5_4:60849317-60849336 | Msa0861500:CDS | 40.0% | |
| GATATCGGTGAAGAACTTCT+CGG | - | chr5_4:60849332-60849351 | Msa0861500:CDS | 40.0% | |
| ATATCGGTGAAGAACTTCTC+GGG | - | chr5_4:60849333-60849352 | Msa0861500:CDS | 40.0% | |
| !! | TCGGGAATTTTGACAGTTCA+AGG | - | chr5_4:60849351-60849370 | Msa0861500:CDS | 40.0% |
| !! | CGGGAATTTTGACAGTTCAA+GGG | - | chr5_4:60849352-60849371 | Msa0861500:CDS | 40.0% |
| !! | GGGAATTTTGACAGTTCAAG+GGG | - | chr5_4:60849353-60849372 | Msa0861500:CDS | 40.0% |
| !! | ATTTTGACAGTTCAAGGGGA+TGG | - | chr5_4:60849357-60849376 | Msa0861500:CDS | 40.0% |
| !! | ATGTTTTCCTGGCTTTTCAC+AGG | + | chr5_4:60849391-60849410 | None:intergenic | 40.0% |
| ! | CGGTCAACTTTATGTTTTCC+TGG | + | chr5_4:60849402-60849421 | None:intergenic | 40.0% |
| TTATGAGGCTGTATTAGGTG+TGG | - | chr5_4:60849612-60849631 | Msa0861500:intron | 40.0% | |
| GTATTAGGTGTGGAAGGAAA+TGG | - | chr5_4:60849622-60849641 | Msa0861500:intron | 40.0% | |
| GTTGGAAGAAGTAAGAAAGC+AGG | - | chr5_4:60849700-60849719 | Msa0861500:intron | 40.0% | |
| TTTGTTCAAGATAGGACTCG+AGG | + | chr5_4:60849733-60849752 | None:intergenic | 40.0% | |
| GAGTCCTATCTTGAACAAAG+AGG | - | chr5_4:60849734-60849753 | Msa0861500:intron | 40.0% | |
| AGAGGAGTTGTTCTACCTAA+AGG | - | chr5_4:60849752-60849771 | Msa0861500:intron | 40.0% | |
| GGAATGGTACTGCAAATACA+AGG | + | chr5_4:60850257-60850276 | None:intergenic | 40.0% | |
| !! | CCTAAGCAAAAGTGTTGTCA+AGG | + | chr5_4:60850562-60850581 | None:intergenic | 40.0% |
| ! | CCTTGACAACACTTTTGCTT+AGG | - | chr5_4:60850559-60850578 | Msa0861500:intron | 40.0% |
| CTCAGAACTCTATTTGGAGA+AGG | - | chr5_4:60850646-60850665 | Msa0861500:intron | 40.0% | |
| ATTTGGAGAAGGCTCGATAA+CGG | - | chr5_4:60850657-60850676 | Msa0861500:intron | 40.0% | |
| ! | CCAAAATGTTCCTTTTGCCA+AGG | + | chr5_4:60850990-60851009 | None:intergenic | 40.0% |
| ! | CCTTGGCAAAAGGAACATTT+TGG | - | chr5_4:60850987-60851006 | Msa0861500:intron | 40.0% |
| ! | TTTGGGGTTATCTGTTGTAC+AGG | - | chr5_4:60851005-60851024 | Msa0861500:intron | 40.0% |
| TTGGGGTTATCTGTTGTACA+GGG | - | chr5_4:60851006-60851025 | Msa0861500:intron | 40.0% | |
| AATTCGGGATGATAAATCCC+TGG | - | chr5_4:60851435-60851454 | Msa0861500:intron | 40.0% | |
| GATGATAAATCCCTGGTTTC+CGG | - | chr5_4:60851442-60851461 | Msa0861500:CDS | 40.0% | |
| GGAAAACTATCTCTTCTCAG+AGG | + | chr5_4:60851474-60851493 | None:intergenic | 40.0% | |
| ATGTAGAAAAATGAGCGCGA+AGG | + | chr5_4:60851653-60851672 | None:intergenic | 40.0% | |
| CAAAGTCAAGCAGATGTGTT+AGG | + | chr5_4:60851756-60851775 | None:intergenic | 40.0% | |
| CTAACACATCTGCTTGACTT+TGG | - | chr5_4:60851754-60851773 | Msa0861500:intron | 40.0% | |
| GAAAGGCAGCAAGTATGTAT+TGG | - | chr5_4:60851872-60851891 | Msa0861500:CDS | 40.0% | |
| GGGAGAGTTCCTTGAATTTA+AGG | - | chr5_4:60851893-60851912 | Msa0861500:CDS | 40.0% | |
| GTTCCTTGAATTTAAGGGCA+AGG | - | chr5_4:60851899-60851918 | Msa0861500:CDS | 40.0% | |
| CTTGAATTTAAGGGCAAGGA+GGG | - | chr5_4:60851903-60851922 | Msa0861500:CDS | 40.0% | |
| TTGAATTTAAGGGCAAGGAG+GGG | - | chr5_4:60851904-60851923 | Msa0861500:CDS | 40.0% | |
| ! | GTCCAAACATGCTTGTCTTT+TGG | + | chr5_4:60851983-60852002 | None:intergenic | 40.0% |
| AAGACAAGCATGTTTGGACT+AGG | - | chr5_4:60851984-60852003 | Msa0861500:intron | 40.0% | |
| CCTTATCTTCCATAAGACAG+AGG | + | chr5_4:60852461-60852480 | None:intergenic | 40.0% | |
| CCTCTGTCTTATGGAAGATA+AGG | - | chr5_4:60852458-60852477 | Msa0861500:intron | 40.0% | |
| AAAGCAGCTATAAGTCTTGC+TGG | - | chr5_4:60852909-60852928 | Msa0861500:five_prime_UTR | 40.0% | |
| !! | CACACTGATTTGGGTTTGGT+TGG | - | chr5_4:60848266-60848285 | Msa0861500:three_prime_UTR | 45.0% |
| !! | CTGATTTGGGTTTGGTTGGT+TGG | - | chr5_4:60848270-60848289 | Msa0861500:three_prime_UTR | 45.0% |
| ! | TTTGGGTTTGGTTGGTTGGT+TGG | - | chr5_4:60848274-60848293 | Msa0861500:three_prime_UTR | 45.0% |
| TTCTCTTCTCCGTAGCTAAC+AGG | - | chr5_4:60848455-60848474 | Msa0861500:three_prime_UTR | 45.0% | |
| ! | TGCAGGCTTCAGAAGCTTTT+TGG | - | chr5_4:60848612-60848631 | Msa0861500:CDS | 45.0% |
| ! | AGGCTTCAGAAGCTTTTTGG+TGG | - | chr5_4:60848615-60848634 | Msa0861500:CDS | 45.0% |
| ! | ACACGTTCTATCAGGAGTGT+CGG | + | chr5_4:60848749-60848768 | None:intergenic | 45.0% |
| ACACAGACACACGTTCTATC+AGG | + | chr5_4:60848757-60848776 | None:intergenic | 45.0% | |
| CCGATGTTCTCCTCACTAAA+AGG | - | chr5_4:60848839-60848858 | Msa0861500:intron | 45.0% | |
| ! | ACACCTTCTACCAGAAGTGT+TGG | + | chr5_4:60848884-60848903 | None:intergenic | 45.0% |
| AGTTCAAGGGGATGGTAGTT+GGG | - | chr5_4:60849365-60849384 | Msa0861500:CDS | 45.0% | |
| AGAGGTTCCTTACAGGATCA+GGG | + | chr5_4:60849428-60849447 | None:intergenic | 45.0% | |
| AAGAGGTTCCTTACAGGATC+AGG | + | chr5_4:60849429-60849448 | None:intergenic | 45.0% | |
| TGGGAAATCACTAGCAGGAA+TGG | + | chr5_4:60850273-60850292 | None:intergenic | 45.0% | |
| TCAGATGGGAAATCACTAGC+AGG | + | chr5_4:60850278-60850297 | None:intergenic | 45.0% | |
| CAGTTGCACCAACTGTTCAT+GGG | + | chr5_4:60850309-60850328 | None:intergenic | 45.0% | |
| TCAGTTGCACCAACTGTTCA+TGG | + | chr5_4:60850310-60850329 | None:intergenic | 45.0% | |
| ! | AGAGAGCACACTCTTTGTTC+CGG | + | chr5_4:60850336-60850355 | None:intergenic | 45.0% |
| ! | AAAGAGTGTGCTCTCTAGCT+GGG | - | chr5_4:60850340-60850359 | Msa0861500:intron | 45.0% |
| GCTTTGCTGGGTCTATAAGT+AGG | + | chr5_4:60850779-60850798 | None:intergenic | 45.0% | |
| !! | TTAGGATGTCTGGCTTTGCT+GGG | + | chr5_4:60850791-60850810 | None:intergenic | 45.0% |
| !! | ATTAGGATGTCTGGCTTTGC+TGG | + | chr5_4:60850792-60850811 | None:intergenic | 45.0% |
| TGGGGAAATACCTTGGCAAA+AGG | - | chr5_4:60850977-60850996 | Msa0861500:intron | 45.0% | |
| TGCACCCTACATAATAGGCT+CGG | - | chr5_4:60851684-60851703 | Msa0861500:intron | 45.0% | |
| TTGCCCGAGCCTATTATGTA+GGG | + | chr5_4:60851691-60851710 | None:intergenic | 45.0% | |
| !! | CAACAGATTGTTTGGCTTGC+AGG | - | chr5_4:60851841-60851860 | Msa0861500:CDS | 45.0% |
| !! | AGATTGTTTGGCTTGCAGGT+TGG | - | chr5_4:60851845-60851864 | Msa0861500:CDS | 45.0% |
| CCTCCTTGCCCTTAAATTCA+AGG | + | chr5_4:60851905-60851924 | None:intergenic | 45.0% | |
| CCTTGAATTTAAGGGCAAGG+AGG | - | chr5_4:60851902-60851921 | Msa0861500:CDS | 45.0% | |
| TGAATTTAAGGGCAAGGAGG+GGG | - | chr5_4:60851905-60851924 | Msa0861500:CDS | 45.0% | |
| TTTCCGTGACTACAGAACCA+AGG | - | chr5_4:60852578-60852597 | Msa0861500:CDS | 45.0% | |
| TTCCGTGACTACAGAACCAA+GGG | - | chr5_4:60852579-60852598 | Msa0861500:CDS | 45.0% | |
| ! | GGTTTGGTTGGTTGGTTGGT+TGG | - | chr5_4:60848278-60848297 | Msa0861500:three_prime_UTR | 50.0% |
| ! | TGGTTGGTTGGTTGGTTGCA+AGG | - | chr5_4:60848286-60848305 | Msa0861500:three_prime_UTR | 50.0% |
| ATGTGGCCTGCGATTATCTG+TGG | - | chr5_4:60848355-60848374 | Msa0861500:three_prime_UTR | 50.0% | |
| AGCTACGGAGAAGAGAACAG+TGG | + | chr5_4:60848452-60848471 | None:intergenic | 50.0% | |
| GGTGAAGCAGAATCAGCATC+AGG | + | chr5_4:60848666-60848685 | None:intergenic | 50.0% | |
| CAGTTCAAGGGGATGGTAGT+TGG | - | chr5_4:60849364-60849383 | Msa0861500:CDS | 50.0% | |
| TCCTTACAGGATCAGGGTGA+CGG | + | chr5_4:60849422-60849441 | None:intergenic | 50.0% | |
| GAGGCTGTATTAGGTGTGGA+AGG | - | chr5_4:60849616-60849635 | Msa0861500:intron | 50.0% | |
| ! | GAGAGCACACTCTTTGTTCC+GGG | + | chr5_4:60850335-60850354 | None:intergenic | 50.0% |
| ! | CAAAGAGTGTGCTCTCTAGC+TGG | - | chr5_4:60850339-60850358 | Msa0861500:intron | 50.0% |
| TCCTTAGCACAGCTCCGATA+TGG | - | chr5_4:60850429-60850448 | Msa0861500:intron | 50.0% | |
| CCTTAGCACAGCTCCGATAT+GGG | - | chr5_4:60850430-60850449 | Msa0861500:intron | 50.0% | |
| CTCTTCTCAGAGGATTGCTC+CGG | + | chr5_4:60851464-60851483 | None:intergenic | 50.0% | |
| TGCGACGTGGTAGAGAATGA+AGG | + | chr5_4:60851628-60851647 | None:intergenic | 50.0% | |
| GCACCCTACATAATAGGCTC+GGG | - | chr5_4:60851685-60851704 | Msa0861500:intron | 50.0% | |
| GTTGCCCGAGCCTATTATGT+AGG | + | chr5_4:60851692-60851711 | None:intergenic | 50.0% | |
| GGATGAGTGTGGACCCAAAT+AGG | + | chr5_4:60851729-60851748 | None:intergenic | 50.0% | |
| ATTTGGGTCCACACTCATCC+AGG | - | chr5_4:60851729-60851748 | Msa0861500:intron | 50.0% | |
| TGTTAGGACCTGGATGAGTG+TGG | + | chr5_4:60851740-60851759 | None:intergenic | 50.0% | |
| CAAGCAGATGTGTTAGGACC+TGG | + | chr5_4:60851750-60851769 | None:intergenic | 50.0% | |
| ! | GCTTGCAGGTTGGAACTGAA+AGG | - | chr5_4:60851855-60851874 | Msa0861500:CDS | 50.0% |
| !! | CTCCCTTGGTTCTGTAGTCA+CGG | + | chr5_4:60852584-60852603 | None:intergenic | 50.0% |
| AGTTGGGCCTGTGAAAAGCC+AGG | - | chr5_4:60849381-60849400 | Msa0861500:intron | 55.0% | |
| ACCGTCACCCTGATCCTGTA+AGG | - | chr5_4:60849418-60849437 | Msa0861500:intron | 55.0% | |
| ! | CAGTTGGTGCAACTGAAGCC+CGG | - | chr5_4:60850314-60850333 | Msa0861500:intron | 55.0% |
| CCCATATCGGAGCTGTGCTA+AGG | + | chr5_4:60850433-60850452 | None:intergenic | 55.0% | |
| GCACAGCTCCGATATGGGAT+AGG | - | chr5_4:60850435-60850454 | Msa0861500:intron | 55.0% | |
| GAGGATTGCTCCGGAAACCA+GGG | + | chr5_4:60851455-60851474 | None:intergenic | 55.0% | |
| AGAGGATTGCTCCGGAAACC+AGG | + | chr5_4:60851456-60851475 | None:intergenic | 55.0% | |
| !! | GCTCTAAGAGGTTGGGCAGA+GGG | + | chr5_4:60851495-60851514 | None:intergenic | 55.0% |
| !! | TGCTCTAAGAGGTTGGGCAG+AGG | + | chr5_4:60851496-60851515 | None:intergenic | 55.0% |
| ACGGTCACTTCGTTCCACTC+TGG | + | chr5_4:60852615-60852634 | None:intergenic | 55.0% | |
| !! | CTCTGGTGCTGATGCTCCCT+TGG | + | chr5_4:60852598-60852617 | None:intergenic | 60.0% |
| !! | AGGGAGCATCAGCACCAGAG+TGG | - | chr5_4:60852598-60852617 | Msa0861500:CDS | 60.0% |
| GAGCGCGAAGGAATGCGACG+TGG | + | chr5_4:60851641-60851660 | None:intergenic | 65.0% | |
| GGGCAAGGAGGGGGATGTTG+AGG | - | chr5_4:60851914-60851933 | Msa0861500:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 60848229 | 60853024 | 60848229 | ID=Msa0861500;Name=Msa0861500 |
| chr5_4 | mRNA | 60848229 | 60853024 | 60848229 | ID=Msa0861500-mRNA-1;Parent=Msa0861500;Name=Msa0861500-mRNA-1;_AED=0.10;_eAED=0.10;_QI=126|1|1|1|1|1|7|293|322 |
| chr5_4 | exon | 60848229 | 60848703 | 60848229 | ID=Msa0861500-mRNA-1:exon:18819;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60849248 | 60849390 | 60849248 | ID=Msa0861500-mRNA-1:exon:18818;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60850797 | 60850985 | 60850797 | ID=Msa0861500-mRNA-1:exon:18817;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60851437 | 60851552 | 60851437 | ID=Msa0861500-mRNA-1:exon:18816;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60851819 | 60851933 | 60851819 | ID=Msa0861500-mRNA-1:exon:18815;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60852535 | 60852636 | 60852535 | ID=Msa0861500-mRNA-1:exon:18814;Parent=Msa0861500-mRNA-1 |
| chr5_4 | exon | 60852777 | 60853024 | 60852777 | ID=Msa0861500-mRNA-1:exon:18813;Parent=Msa0861500-mRNA-1 |
| chr5_4 | five_prime_UTR | 60852899 | 60853024 | 60852899 | ID=Msa0861500-mRNA-1:five_prime_utr;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60852777 | 60852898 | 60852777 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60852535 | 60852636 | 60852535 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60851819 | 60851933 | 60851819 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60851437 | 60851552 | 60851437 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60850797 | 60850985 | 60850797 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60849248 | 60849390 | 60849248 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | CDS | 60848522 | 60848703 | 60848522 | ID=Msa0861500-mRNA-1:cds;Parent=Msa0861500-mRNA-1 |
| chr5_4 | three_prime_UTR | 60848229 | 60848521 | 60848229 | ID=Msa0861500-mRNA-1:three_prime_utr;Parent=Msa0861500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
